mRNA_S-ischiensis_contig9.20400.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20400.1
Unique NamemRNA_S-ischiensis_contig9.20400.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 1.220e-99
Identity = 168/229 (73.36%), Postives = 181/229 (79.04%), Query Frame = 1
Query:  100 ARDRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEV 786
            AR+ LLGP R  YAHAVL CP NLRWKVWLAG+RMELAAG CL AQRLL R FQEVP+KSKSHVFLEC                  RAR ETKSEWKVFLESVLLEIRA+DW+RAA EAQ AL++HSGAGRLWAVLVQLKQR      SD AQQA+LKQALKEVPKSGEVWCEGARIHLNPLSK+F L TA KYL FA+QFTPQYGDSFMECLRL LL  + LP A+ +
Sbjct:  536 ARNSLLGPCRSAYAHAVLTCPHNLRWKVWLAGARMELAAGNCLHAQRLLNRAFQEVPEKSKSHVFLECXXXXXXXXXXXXXXXXXXRARVETKSEWKVFLESVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRD-----SDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLNDIFLPKARAI 759          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA)

HSP 1 Score: 265 bits (677), Expect = 2.950e-77
Identity = 137/233 (58.80%), Postives = 169/233 (72.53%), Query Frame = 1
Query:   91 ITVARDRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEVV 789
            I   R  LLG  R+ Y  A L  P NLRWKVWLAG+R EL AG+  +A+ LL+R F+EVPDKSK+HVFLEC+RLEE+ G       +L +AR E + EWKVFLESVLLE+RA +W RA  +A+ AL +H+G GRLWA+LVQL  R  G  G  +     L+QAL EVPKSGEVWCEGARIHL+P+S +F L  A +YLDFAIQFTPQYGDSF+E LRL L+ Q++ P A+ V+
Sbjct:  925 IPAVRGELLGRCRQYYVDAALTAPSNLRWKVWLAGARTELGAGRVDVARALLRRAFREVPDKSKAHVFLECARLEEYVGXXXXXXSVLAQARVEARGEWKVFLESVLLEMRAGEWVRAIDQARSALSVHTGTGRLWAILVQL--RYLGGAGEQVR---VLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARSVI 1152          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.520e-68
Identity = 128/220 (58.18%), Postives = 152/220 (69.09%), Query Frame = 1
Query:  127 RRCYAHAVLACPQNLRWKVWLAGSRMELA----AGKCLL-------AQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLL 753
            R  Y  +VL CP NLRWKVWLAG R ELA      K  +       AQ+LL R   +VPDKS++ V LECSR+EE+ G +  AREIL +AR ETK EWKVFLESV+LE+R  +   A  EA+ AL IHSG GRLWA+LVQL        G D  Q+   ++ALK+VPKSGEVWCEGAR+HL+PLS  F L TA +YL+FAIQFTPQYGDSF+E LR  LL
Sbjct:  696 RAAYVQSVLRCPNNLRWKVWLAGVRTELANADSKNKLTVDNAGVQKAQKLLNRALMDVPDKSRAQVLLECSRVEEYIGKIDKAREILAKARKETKHEWKVFLESVMLEVRCGNRDGALKEAKSALEIHSGTGRLWAILVQLTHAH----GPD-QQRLVFREALKQVPKSGEVWCEGARVHLHPLSPHFDLETASRYLEFAIQFTPQYGDSFVEALRFHLL 910          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.740e-67
Identity = 126/233 (54.08%), Postives = 153/233 (65.67%), Query Frame = 1
Query:   91 ITVARDRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEVV 789
            I   R  LLG  R+CY  A L  P NLRWKVWLAG+R EL AG+   A+ LL+R F EVPDKSK+H                        AR E + EWKVFLESVLLE+RA +W RA  +A+ AL +H+G GRLWA+LVQL  R  G  G  +     L+QAL EVPKSGEVWCEGARIHL+P+S +F L  A +YLDFAIQFTPQYGDSF+E LRL L+ Q++ P A+ ++
Sbjct: 1275 IPAVRGELLGRCRQCYVDAALTAPSNLRWKVWLAGARTELGAGRVDFARALLRRAFCEVPDKSKAHXXXXXXXXXXXXXXXXXXXXXXXXARVEARGEWKVFLESVLLEMRAGEWARAIDQARSALSVHTGTGRLWAILVQL--RYLGGAGEQVR---VLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARSII 1502          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S4MSC1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSC1_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.750e-66
Identity = 115/222 (51.80%), Postives = 152/222 (68.47%), Query Frame = 1
Query:  127 RRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEVVR 792
            RR +A  +L CP +L WKVWLAG RMEL AG+   A++L  R    VP+K ++ V LEC+RLEEF G+++ AR IL +AR    S+WKV+LES+ LE+R     RA   AQ AL +HSG GRLWA LVQL+Q        + AQ + LK+AL  VPKSGEVWCEG R+HLNP   +F L  A+ +LDFA +FTPQYGDSF+E LRL ++ + + P A ++++
Sbjct:   66 RRSFAKTILTCPPSLCWKVWLAGGRMELMAGRTDEARQLFLRSHDVVPEKGRAAVMLECARLEEFAGDIELARAILSKARFNAGSDWKVWLESIFLEMRCGMRGRAIRLAQNALDVHSGTGRLWAALVQLRQPD-----GEAAQMSVLKRALWSVPKSGEVWCEGGRLHLNPFFPNFGLEEAELHLDFATKFTPQYGDSFLETLRLNIVLEQICPIANDMIK 282          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S0GLS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLS1_9STRA)

HSP 1 Score: 221 bits (563), Expect = 4.910e-65
Identity = 114/215 (53.02%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  127 RRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLP 771
            RR +  A+L+CP NL WKVWLA  RMEL AG+  +A++L  R +  VPDK +S V LEC+RLEEF  +V+ AR IL +AR++  S+WK++LESV LE+R    R+A   AQ AL IHS  GRLWA+LVQ++         ++ Q   L +AL  VPKSGEVWCE  R+HLNP   +F L  A+ YL FA +FTPQYGDSF+E ++L LL  LLLP
Sbjct:  204 RRSFVRAILSCPPNLCWKVWLASGRMELTAGRTSIARKLFMRAYNVVPDKGRSTVLLECARLEEFVDDVKLARAILCKARNDNDSDWKIWLESVSLELRCGRRRKAVELAQNALDIHSCTGRLWALLVQIRHED-----GEVKQSDVLIRALSSVPKSGEVWCEAGRLHLNPFVPTFDLDRAELYLMFATKFTPQYGDSFLETVKLELLKSLLLP 413          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S0Q4B3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4B3_9EUKA)

HSP 1 Score: 223 bits (568), Expect = 7.410e-65
Identity = 118/211 (55.92%), Postives = 144/211 (68.25%), Query Frame = 1
Query:  127 RRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQ 759
            R  Y  +V  C  NLRWKVWL GSR EL   +  ++Q LL+R ++E P K+++ V LE SRL E CGNV+ AR++L  AR   + EWKVFLESVLLE+R+    RA  EA+ AL +H G GRLWAVL+QL+  Q         Q    +QAL EVPKSGEVWCEGARI LNP S  F+L  A  +LDFAI+FTPQYGDSF+E LRL+LL Q
Sbjct:  290 RAAYVKSVATCAANLRWKVWLGGSRTELCHSQFNVSQALLERAYEESPPKTRAIVMLEQSRLHELCGNVEQARKLLRGARKTNRQEWKVFLESVLLELRSQHVERALREARKALEVHRGTGRLWAVLIQLEHAQ-----GVHQQLRVFQQALLEVPKSGEVWCEGARICLNPFSDCFNLEAAHNFLDFAIEFTPQYGDSFIEYLRLQLLMQ 495          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S1VNZ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNZ6_9STRA)

HSP 1 Score: 226 bits (576), Expect = 7.690e-65
Identity = 123/224 (54.91%), Postives = 155/224 (69.20%), Query Frame = 1
Query:  106 DRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHA 777
            D LL P R+ +A   + C  NL WKV LAG RMELAAG    A++L  R  + VP+K K    LECSRLEEF GNV  AR IL ++R E  S+WKV+LESVL+E+R  +  RA   A+ AL+IH+G GRLWA LVQL+  ++    +D  Q AALK+AL+ VPKSGEVWCEG R++LNP ++ F L  A ++L FA +FTPQYGDSF+E LRL LL + LLP A
Sbjct:  354 DVLLEPCRKQFAMTTMTCQANLCWKVLLAGGRMELAAGNFEKARKLFHRAHRSVPEKGKVATLLECSRLEEFIGNVDRARAILTKSRIEITSDWKVWLESVLVEVRGGEKDRAIDLAKRALQIHTGTGRLWAALVQLRYSEE----TDETQYAALKKALRAVPKSGEVWCEGGRMNLNPFARCFDLDEARRHLFFATRFTPQYGDSFVESLRLELLEKWLLPVA 573          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7R9UFL8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFL8_9STRA)

HSP 1 Score: 217 bits (553), Expect = 6.040e-64
Identity = 113/218 (51.83%), Postives = 155/218 (71.10%), Query Frame = 1
Query:  166 NLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSD--LAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEVVRRRRESKQ 813
            NLRWKVWLA +R EL  G+  LA+ L++R  +E+P K++   +LE SR+EEF G++++AR+IL  AR E  +EWK+FLESV+LE+R+   R A  +A+ AL +H G GRLWA L+ L+        SD   AQ A  ++AL+EVPKSGEVW EGAR+HLNPLS+ F    A ++L+FAI FTPQYGDSF+E +RLRL+ + LLP A  + RR R +++
Sbjct:    1 NLRWKVWLAAARTELGVGRADLARLLVKRSMREIPPKARYMAWLEMSRIEEFVGDLESARQILCAARQEAVTEWKIFLESVMLELRSGHIREATLQAETALEVHRGTGRLWAALITLR-------ASDGVTAQAAVFRRALQEVPKSGEVWAEGARLHLNPLSQLFDPECAARFLEFAILFTPQYGDSFLELIRLRLVLRCLLPQALLLYRRGRHARE 211          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S1YIW7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIW7_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.130e-63
Identity = 123/224 (54.91%), Postives = 155/224 (69.20%), Query Frame = 1
Query:  106 DRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHA 777
            D LL P R+ +A   + C  NL WKV LAG RMELAAG    A++L  R  + VP+K K    LECSRLEEF GNV  AR IL ++R E  S+WKV+LESVL+E+R  +  RA   A+ AL+IH+G GRLWA LVQL+  ++    +D  Q AALK+AL+ VPKSGEVWCEG R++LNP ++ F L  A ++L FA +FTPQYGDSF+E LRL LL + LLP A
Sbjct: 1214 DVLLEPCRKQFAMTTMTCQANLCWKVLLAGGRMELAAGNFEKARKLFHRAHRSVPEKGKVATLLECSRLEEFIGNVDRARAILTKSRIEITSDWKVWLESVLVEVRGGEKDRAIDLAKRALQIHTGTGRLWAALVQLRYSEE----TDETQYAALKKALRAVPKSGEVWCEGGRMNLNPFARCFDLDEARRHLFFATRFTPQYGDSFVESLRLELLEKWLLPVA 1433          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN71_ECTSI1.220e-9973.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TFT0_9STRA2.950e-7758.80Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A6S8EA78_9STRA2.520e-6858.18Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A4D9D155_9STRA2.740e-6754.08Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4MSC1_9STRA1.750e-6651.80Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0GLS1_9STRA4.910e-6553.02Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S0Q4B3_9EUKA7.410e-6555.92Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S1VNZ6_9STRA7.690e-6554.91Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7R9UFL8_9STRA6.040e-6451.83Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1YIW7_9STRA1.130e-6354.91Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:204582..208073 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.4
Seed ortholog evalue6.4e-87
Seed eggNOG ortholog2880.D8LN71
EggNOG OGs28JG8@1,2QRVD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size831
Cds size831
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20400.1prot_S-ischiensis_contig9.20400.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 204582..208073 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817375.5506673-CDS-S-ischiensis_contig9:204581..2048361622817375.5506673-CDS-S-ischiensis_contig9:204581..204836Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 204582..204836 -
1695741065.7753792-CDS-S-ischiensis_contig9:204581..2048361695741065.7753792-CDS-S-ischiensis_contig9:204581..204836Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 204582..204836 -
1622817375.565638-CDS-S-ischiensis_contig9:205440..2056261622817375.565638-CDS-S-ischiensis_contig9:205440..205626Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 205441..205626 -
1695741065.7881727-CDS-S-ischiensis_contig9:205440..2056261695741065.7881727-CDS-S-ischiensis_contig9:205440..205626Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 205441..205626 -
1622817375.5758784-CDS-S-ischiensis_contig9:206036..2060901622817375.5758784-CDS-S-ischiensis_contig9:206036..206090Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 206037..206090 -
1695741065.8003018-CDS-S-ischiensis_contig9:206036..2060901695741065.8003018-CDS-S-ischiensis_contig9:206036..206090Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 206037..206090 -
1622817375.5866578-CDS-S-ischiensis_contig9:206686..2068421622817375.5866578-CDS-S-ischiensis_contig9:206686..206842Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 206687..206842 -
1695741065.810469-CDS-S-ischiensis_contig9:206686..2068421695741065.810469-CDS-S-ischiensis_contig9:206686..206842Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 206687..206842 -
1622817375.5983725-CDS-S-ischiensis_contig9:207893..2080731622817375.5983725-CDS-S-ischiensis_contig9:207893..208073Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 207894..208073 -
1695741065.8218064-CDS-S-ischiensis_contig9:207893..2080731695741065.8218064-CDS-S-ischiensis_contig9:207893..208073Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 207894..208073 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20400.1

>prot_S-ischiensis_contig9.20400.1 ID=prot_S-ischiensis_contig9.20400.1|Name=mRNA_S-ischiensis_contig9.20400.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=277bp
SASAPAGGGEPPSGEAVIVQGQEAEGEPLPITVARDRLLGPTRRCYAHAV
LACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLE
CSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAW
EAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKS
GEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRL
LTQLLLPHAQEVVRRRRESKQGAGGSG
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mRNA from alignment at S-ischiensis_contig9:204582..208073-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20400.1 ID=mRNA_S-ischiensis_contig9.20400.1|Name=mRNA_S-ischiensis_contig9.20400.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3492bp|location=Sequence derived from alignment at S-ischiensis_contig9:204582..208073- (Schizocladia ischiensis KU_0333)
TCAGCTTCGGCCCCCGCGGGGGGTGGGGAGCCTCCGTCCGGCGAGGCTGT GATTGTACAAGGACAAGAGGCCGAGGGGGAGCCGCTGCCCATCACTGTGG CCCGGGACCGGTTGCTGGGTCCGACGCGGCGGTGCTACGCGCACGCCGTG CTCGCCTGCCCGCAGAACCTGCGCTGGAAGGTAGGTACTCTGCTGTACTG TACTTCACTGTACTGTGTAGGTCAACCTGCGCTGGAAGCTACTGTGCTGT GCTGTGCTGTACTGTGTATGTGAACCTGCGCTGGAAGGTACTGTGCTGTA CTGTACTGTACTTTGCTGTGCTGTGTATGTCAAGGCGCGCTATACTTTAT ATATATACTACAGTACTAGTATATGTACTCACGTGGTTGTGCTTGCCGTA GTCCCGAGACCATTGACCTTACCTGCTGTGCTATCAATGAACTGTACTGT ACTGTACAGCCGTACACTAGGCAAGTACTTGATACGACTCGGTGGAGCGT TGCTAGATCGGTCTATACTGCGAAGTACTGCACATGCTTGTGGTAGGTCC AGTGCATGATAGGATGTCAACGTGCCTGCCTGTCACGGAATCTGCGCTGA AGGGTGGAAGGGATAGGTAGCCTACAGTAGGCAGTACTGAGCGACTACCG ACTGTACTGTACATTGCTGTACTGTAACTGTTGTGGCATGCTGTACTGTA CACCTATGTCCTTGTACTGTAGTACTGTACTTCGAAGTATATGTACTGCA CACTAACGGCATCCCAAATGCGACATCTCAGCCTGCGAACTACTGTGCCT ACTGGAGACTTCAGCATGTTACTGTATACCACGGTACCGTACTGAATCTG TATTGTACCTGGATCCTGCTGCCATACATGCAATGGCTTCGGCCGTCTTG CTTATTGCTGCGTGCACGCAGTGTGAGTCCGTGCTGACCATGTCTCATTG CGGGGCACTAGCGGTACCGTAGCTTATGTGTATATGTACTTATGTTGTGC TTGCCGTAGTCCCGAGAGCGTTGCAGGGCACTAGCAGGAACTTGTGCGCG TGTCAAATGCTGTGAGTGCTGCATGCCCTCGACACCCAAACAACACATGC ATGTAGCAAGCGCCCCCCCTTTTGTTTTTAATTCGCTGATGTGATAACCA CTACTGCAGCACGAGCACACTCAGTCTCACACACGTGCCATGTACGTCAT TACAATCTATCTGAATCACCCAACGACACAGGTGTGGCTGGCGGGTTCCA GGATGGAGCTGGCGGCGGGCAAGTGCTTGCTTGCCCAGCGGCTGCTGCAG CGCGGGTTCCAGGAGGTGCCGGACAAGAGCAAGTCACACGTGTTCCTAGA GTGCTCCCGATTGGAGGAGTTCTGCGGGAACGTGCAGGCAAGTTACTTCG TATATACCGCAATCGTCGGAGATATCTTGCCCCCCCGGGACAATGTTTGG GAGACAATTTCTCGCGGGGTAGGTTCCGAATGGTCCTGAAATCCCTCGGA CTGATTCCTCCAGGTCCTGAGGAAAGCTTCCTGTGTTTTCCCGTGCGAAT CCGACCAGTATTGGGCGAGAAATGCCCTCGCGAACGTGGGCATGGGAGGG CAAGATCTCTCCGACGATTACGGTACTTACTGTACTGTACTGTACTGTAC ATGCCGTGTTCCCAACAGTAACATCGAATTTTTTGTAGAGAGTGGCACTT TTTGGCCATTCTTGCCTGGTACAGTATATACTTGCCGTACTGTAGTGTGC ACACGCCGTATTCCTAACAATACCGGAATTTTGTAGAGAGAGCGGCGCTT TTTGGCCGTTCTCAACTACCAGGCACAGAATGCCCTTTCAAATAATGCCT TTGTAACCTTTGTTGCTGAGAGTGGCAGCAAGGGAACTTTTCAACAACGG CGCTTTTGTTTTCTTGCCGACATGAGTGACAATACACACACCTTGCTTGT ACCGTACTGTACGTGTTGTAACTGTCGTAACAGGCTGCCAGAGAGATACT GGAGCGAGCCAGGAGCGAGACCAAGAGCGAGTGGAAGGTGTGTGTGTGTG TGTGTGTGTGCGTGCGTGCGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTG TGCATGTGTGTGGTGGATGCAATTATCAATCCTGTTGTAGAGGCCCAAAA CAGCGCCTACAAGTACTCACTCTACTGTGGAGTTCACACTAAGTGTACGT ATCACTACACCGAATGCTAGATACTACCTAGTCGGGACTTTTGCTGCCGA AAGTGGTCTGCCCGGACTGCTTCCCATTGTAGAGTAAACTCGTAATGCAT GGAACACACCTGACCTCTGAGTGTGAACTGCCTGTAAAACCTCAAGGTGC TCCTGGAGAGCGTCCTAAAGTGGTCTGCCCGGACTACAATTGTAGAGTAA TGCAATTGTACACCTGCCATGTGACTCCCTGACTGTAAAACCCCCAGGTG TTCCTGGAGAGCGTTTTGCTGGAGATCCGTGCCAGCGACTGGAGGCGTGC GGCGTGGGAGGCCCAGTGCGCACTGCGCATACACTCGGGGGCAGGGCGGC TGTGGGCGGTGCTGGTGCAGCTCAAGCAGCGACAGCAGGGGAAGGGGGGG AGCGACCTGGCACAGCAGGCTGCGCTCAAGCAGGTACAATTTGCAGCACT ATACTATGTACTCTACAGTACTTTACGCCATATATATACTGGTGTACTCG TATGTATACTACTGTACGATGTACCAGTGCTTCTGGCAATAGTACAGTAG TGCAGCGAGAGTATCTCTTTGCCGAGTCGTCGTCACCAGCACTGTACATG CTGTGCAAACAATATGCACTATACCTTGCACTCGCATGGAGAGGCAAATG TATGCTTGTGTACGAAGCAGTAGCAGTAGGTCAAGTTACTACCTTCCTCA CACAAACTTCCCCTAGCGAGCTAAGGAAGGGCCACTGTTGAGGTCATGAG TAACATGGCCTGCGCCTCGCCCTGTGTTGTTCCTGTTATTACTACTGTAC TACCGGTATGTACAGCATGTAGTATCCCTGACCCAAACACTCCCCCTTCT CCCCGCTCGCCCTGTGTTTTCCCTGTTACCGTAGTACTACGTAGGGTACA ATGTAGGGTACAAGTACCCCACACTGCTACTATACCTTGTACGGTAGTGC AGTGCTGTACTGTACAGCGTGTAGGAAGCATCCCCGACCCAAGCACCCGC CCCTTCTCCCCGCAACTCTGCGCCCTTTGAACACCAGGCCCTCAAGGAAG TGCCCAAGTCGGGCGAGGTGTGGTGCGAGGGCGCCCGCATCCACCTCAAC CCCCTGTCCAAGAGCTTCCACCTGCCCACAGCGGACAAGTACCTGGACTT TGCCATCCAGTTCACGCCCCAGTACGGGGACTCCTTCATGGAGTGCCTGC GCCTGCGCCTGCTCACGCAGCTGCTGCTGCCCCACGCCCAGGAGGTGGTA AGGCGCAGACGGGAGAGCAAGCAAGGGGCCGGCGGCAGCGGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:204582..208073-

>mRNA_S-ischiensis_contig9.20400.1 ID=mRNA_S-ischiensis_contig9.20400.1|Name=mRNA_S-ischiensis_contig9.20400.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1662bp|location=Sequence derived from alignment at S-ischiensis_contig9:204582..208073- (Schizocladia ischiensis KU_0333)
TCAGCTTCGGCCCCCGCGGGGGGTGGGGAGCCTCCGTCCGGCGAGGCTGT
GATTGTACAAGGACAAGAGGCCGAGGGGGAGCCGCTGCCCATCACTGTGG
CCCGGGACCGGTTGCTGGGTCCGACGCGGCGGTGCTACGCGCACGCCGTG
CTCGCCTGCCCGCAGAACCTGCGCTGGAAGTCAGCTTCGGCCCCCGCGGG
GGGTGGGGAGCCTCCGTCCGGCGAGGCTGTGATTGTACAAGGACAAGAGG
CCGAGGGGGAGCCGCTGCCCATCACTGTGGCCCGGGACCGGTTGCTGGGT
CCGACGCGGCGGTGCTACGCGCACGCCGTGCTCGCCTGCCCGCAGAACCT
GCGCTGGAAGGTGTGGCTGGCGGGTTCCAGGATGGAGCTGGCGGCGGGCA
AGTGCTTGCTTGCCCAGCGGCTGCTGCAGCGCGGGTTCCAGGAGGTGCCG
GACAAGAGCAAGTCACACGTGTTCCTAGAGTGCTCCCGATTGGAGGAGTT
CTGCGGGAACGTGCAGGTGTGGCTGGCGGGTTCCAGGATGGAGCTGGCGG
CGGGCAAGTGCTTGCTTGCCCAGCGGCTGCTGCAGCGCGGGTTCCAGGAG
GTGCCGGACAAGAGCAAGTCACACGTGTTCCTAGAGTGCTCCCGATTGGA
GGAGTTCTGCGGGAACGTGCAGGCTGCCAGAGAGATACTGGAGCGAGCCA
GGAGCGAGACCAAGAGCGAGTGGAAGGCTGCCAGAGAGATACTGGAGCGA
GCCAGGAGCGAGACCAAGAGCGAGTGGAAGGTGTTCCTGGAGAGCGTTTT
GCTGGAGATCCGTGCCAGCGACTGGAGGCGTGCGGCGTGGGAGGCCCAGT
GCGCACTGCGCATACACTCGGGGGCAGGGCGGCTGTGGGCGGTGCTGGTG
CAGCTCAAGCAGCGACAGCAGGGGAAGGGGGGGAGCGACCTGGCACAGCA
GGCTGCGCTCAAGCAGGTGTTCCTGGAGAGCGTTTTGCTGGAGATCCGTG
CCAGCGACTGGAGGCGTGCGGCGTGGGAGGCCCAGTGCGCACTGCGCATA
CACTCGGGGGCAGGGCGGCTGTGGGCGGTGCTGGTGCAGCTCAAGCAGCG
ACAGCAGGGGAAGGGGGGGAGCGACCTGGCACAGCAGGCTGCGCTCAAGC
AGGCCCTCAAGGAAGTGCCCAAGTCGGGCGAGGTGTGGTGCGAGGGCGCC
CGCATCCACCTCAACCCCCTGTCCAAGAGCTTCCACCTGCCCACAGCGGA
CAAGTACCTGGACTTTGCCATCCAGTTCACGCCCCAGTACGGGGACTCCT
TCATGGAGTGCCTGCGCCTGCGCCTGCTCACGCAGCTGCTGCTGCCCCAC
GCCCAGGAGGTGGTAAGGCGCAGACGGGAGAGCAAGCAAGGGGCCGGCGG
CAGCGGCGCCCTCAAGGAAGTGCCCAAGTCGGGCGAGGTGTGGTGCGAGG
GCGCCCGCATCCACCTCAACCCCCTGTCCAAGAGCTTCCACCTGCCCACA
GCGGACAAGTACCTGGACTTTGCCATCCAGTTCACGCCCCAGTACGGGGA
CTCCTTCATGGAGTGCCTGCGCCTGCGCCTGCTCACGCAGCTGCTGCTGC
CCCACGCCCAGGAGGTGGTAAGGCGCAGACGGGAGAGCAAGCAAGGGGCC
GGCGGCAGCGGC
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