mRNA_S-ischiensis_contig89.20373.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig89.20373.1
Unique NamemRNA_S-ischiensis_contig89.20373.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: D7G5R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R8_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 6.640e-44
Identity = 81/117 (69.23%), Postives = 97/117 (82.91%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAAKSPDVDGRGAVRQALAGEGP 354
            +P+LSEKLL K PFR+LHD+ISAVTA+TGF  GLY+ +ELDSG++KDK +KI YL+KII+LVGIC GR +DVRP K+VAGLEPE TN LL  LGK AKS D+D   AVR+ALAGE P
Sbjct:   19 KPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSDEELDSGSVKDKGSKIGYLDKIIALVGICSGRDIDVRPSKVVAGLEPEGTNALLTALGKCAKSADLDFDEAVRRALAGEPP 135
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A835YT93_9STRA (Microtubule-binding protein MIP-T3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT93_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.630e-37
Identity = 72/117 (61.54%), Postives = 89/117 (76.07%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAAKSPDVDGRGAVRQALAGEGP 354
            +PKL+EKLL KPPFR+LHD+ISAVTAATGFG GLY+GDELDSG +K+K  K+AYL+K ++ VG C G AVD+R  K+VAGLEPE TN  L  L + A +  +D  GAV + L GE P
Sbjct:   22 KPKLTEKLLSKPPFRFLHDVISAVTAATGFGTGLYSGDELDSGLVKEKGPKMAYLDKAVACVGFCQGTAVDIRSAKVVAGLEPENTNAFLLALARVATNRQLDWEGAVNRVLRGEVP 138
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A024TML3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TML3_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.170e-33
Identity = 78/154 (50.65%), Postives = 99/154 (64.29%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAAKSPDVDGRGAVRQALAGEGPQPSASRRNSRRDSERSIGGGGPAVAPPQEPAPA-KEA 462
            +PKL+EKLL KPPFR+LHDI SA+ A+TGF +GLYT  ELDS  +K+K  K+ +L+K++   G CHG+ +DVR  KIVAGLEPE TN  L  L  AA +  +D  GAV++ALA   P P         ++    G GG    PP E APA KEA
Sbjct:   21 KPKLAEKLLQKPPFRFLHDIFSALMASTGFAKGLYTDYELDSANVKEKHQKLQFLDKMVYCTGQCHGKEIDVRSAKIVAGLEPENTNIFLTELALAASNTSLDWNGAVQKALAAFPPLP---------ETLAGSGSGGAEAKPPSEDAPAAKEA 165
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A7S3YFX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFX9_HETAK)

HSP 1 Score: 124 bits (312), Expect = 7.200e-33
Identity = 70/114 (61.40%), Postives = 79/114 (69.30%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICH--GRAVDVRPGKIVAGLEPERTNELLALLGKAAKSPDVDGRGAVRQAL 339
            +PKLSEKLL KPPFR++HD IS  TA TGF EGL+ G ELD   +KDK  KIAYLEK I+   ICH  G ++DVR  KIVAGLEPE TN LLA LG+ AK    D  GAV   L
Sbjct:    8 KPKLSEKLLSKPPFRFIHDCISNTTAETGFLEGLFEGAELDGKGMKDKGDKIAYLEKAIT--AICHAKGESIDVRASKIVAGLEPENTNLLLAALGECAKDKSRDWAGAVAAGL 119
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A8J4D5E8_9CHLO (MIP-T3 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D5E8_9CHLO)

HSP 1 Score: 124 bits (310), Expect = 2.380e-32
Identity = 60/99 (60.61%), Postives = 75/99 (75.76%), Query Frame = 1 
Query:    1 DRPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAAK 297
            D+PKLSEKLL KPPFR+LHD++SAV ++TGF  GL+ GDELD  AI++K AK+AYL KII +V +  G     RP KIVAGLEPE TN  L +LG+A +
Sbjct:   20 DKPKLSEKLLVKPPFRFLHDVVSAVQSSTGFAPGLFQGDELDGKAIQEKDAKVAYLRKIIDVVSMTLGEQCPARPNKIVAGLEPENTNVFLQMLGRACR 118
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A7S1XM13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM13_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.450e-32
Identity = 82/162 (50.62%), Postives = 99/162 (61.11%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAAKSPDVDGRGAVRQALAGEGPQPSASRRNSRRDSERSIGGGGPAVAPPQEPAPAKEAPEMPQDRGG 489
            RP+L++KLL KPPFR+LHD+ISAV   TGFG GLYT +E+DS  +KDKAAK+AYLEKII LVG+     VD RP KIVAG EPE TN LL LLG  A     D   AV  ++ G  P PSA  +     +E          AP   P  A ++ E  + RGG
Sbjct:  105 RPRLTDKLLAKPPFRFLHDVISAVIVKTGFGAGLYTEEEMDSKKVKDKAAKVAYLEKIIRLVGMQLNTLVDARPNKIVAGHEPENTNVLLQLLGVCATKA-TDSAAAV-SSITGAAP-PSAGAKEGAPQAE--------IPAPAPSPRDAHDSDEKAEARGG 255
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A8J5XXU0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XXU0_DIALT)

HSP 1 Score: 131 bits (329), Expect = 4.050e-32
Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAAKSPDVDGRGAVRQALAGEGPQPSASR 372
            RPKL++ LL KPPFR+LHDI+S VT  TGF +GLY   E +SG IK+K AKIAYL+KII  V    G  VD+RP K+VAG+EPE TN  L LL +AA  P++D   AV + L GE   P  +R
Sbjct:   24 RPKLTDALLKKPPFRFLHDIVSEVTKVTGFADGLYDEAEANSGNIKEKDAKIAYLQKIIDCVSFALGTKVDIRPNKVVAGMEPEATNTFLQLLARAATDPNIDRNSAVSRVLGGETTAPKPAR 146
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A7S2B9K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9K6_9STRA)

HSP 1 Score: 130 bits (326), Expect = 9.490e-32
Identity = 83/176 (47.16%), Postives = 103/176 (58.52%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAAKSPDVD-GRGAVRQALAGE-----------GPQPSASRRNSRRDSERSIGGGGPAVAPPQEPAPAKE-APEMPQDRGGG 492
            +P + EKLL KPPFR++HD++SAVT  TGF  GLY G+ELD   +KDK AKIAYLEKII LVG+     VD +P KIVAGLEPE TN+ L  L  AA S D       V +A+AGE            P P+A  +  R + +          A   EPAPAK+ + + P  RGGG
Sbjct:   63 KPAMKEKLLTKPPFRFVHDVVSAVTETTGFAAGLYEGEELDGKGMKDKGAKIAYLEKIIKLVGVVLNTLVDTKPAKIVAGLEPENTNKWLQNLAAAATSVDAGKSSDCVARAIAGEEPGAGDNPKGEAPAPAAEDKGGRAEGKD---------ADADEPAPAKDDSGKPPASRGGG 229
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A7R9U6Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Z5_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.680e-31
Identity = 80/153 (52.29%), Postives = 98/153 (64.05%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAA-KSPDVDGRGAVRQALAGEGPQPSASRRNSRRDSERSIGGGGPAVAPPQ--EPAPA 453
            RP+L++KLLGKPPFR+LHDIISAV   TGFG GL++ +E+DS  ++DK +KI YLEKII LVG+     V  RP KIVAG EPE TN LL LLG  A K PD     A   A+ G  P+P        +  ER+ GG   A + P+  EPAPA
Sbjct:   15 RPRLTDKLLGKPPFRFLHDIISAVIRNTGFGAGLFSEEEMDSANVRDKQSKITYLEKIIRLVGMQLNTLVSARPSKIVAGHEPENTNVLLQLLGLCATKVPDSS---AAVAAILGNAPEP--------KQPERAPGG---AASSPKASEPAPA 153
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BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Match: A0A485LHH4_9STRA (Aste57867_21409 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHH4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.370e-31
Identity = 82/154 (53.25%), Postives = 103/154 (66.88%), Query Frame = 1 
Query:    4 RPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKAAKIAYLEKIISLVGICHGRA-VDVRPGKIVAGLEPERTNELLALLGKAAKSPDVDGRGAVRQALAGEGPQPSASRRNSRRDSERSIGGGGPAVAPPQEPAPAKEA 462
            +PK+S KLL KPPFR+LHDI+S VT ATGF +GLYT DELDS  IK+K  KI YL+KII+ VG CH    VD +P KIVAGLEP+ TN+ L LL  AAKS +  G  AV++ALAG+  +P  S  +++R S        P  A  +  A AK+A
Sbjct:  261 KPKMSAKLLSKPPFRFLHDIVSEVTRATGFADGLYTADELDSNTIKEKQPKIDYLQKIINCVG-CHLNVEVDAKPAKIVAGLEPDDTNKFLQLLALAAKSGNSSG--AVQRALAGD-TRPVNSAESAKRQSIVVADEAPPVAAAVEAKAEAKQA 410
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig89.20373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5R8_ECTSI6.640e-4469.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YT93_9STRA1.630e-3761.54Microtubule-binding protein MIP-T3-domain-containi... [more]
A0A024TML3_9STRA4.170e-3350.65Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S3YFX9_HETAK7.200e-3361.40Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J4D5E8_9CHLO2.380e-3260.61MIP-T3 domain-containing protein n=1 Tax=Volvox re... [more]
A0A7S1XM13_9STRA2.450e-3250.62Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J5XXU0_DIALT4.050e-3255.28Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2B9K6_9STRA9.490e-3247.16Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7R9U6Z5_9STRA1.680e-3152.29Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A485LHH4_9STRA4.370e-3153.25Aste57867_21409 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig89contigS-ischiensis_contig89:497953..505508 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.0
Seed ortholog evalue6.6e-40
Seed eggNOG ortholog2880.D7G5R8
Preferred nameTRAF3IP1
KEGG koko:K19680
GOsGO:0000003,GO:0000122,GO:0001654,GO:0001655,GO:0001738,GO:0001817,GO:0001818,GO:0001822,GO:0001932,GO:0001933,GO:0002009,GO:0002119,GO:0002164,GO:0002682,GO:0002683,GO:0002697,GO:0002698,GO:0002831,GO:0002832,GO:0003002,GO:0003008,GO:0003674,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0006355,GO:0006357,GO:0006810,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007017,GO:0007018,GO:0007275,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0007610,GO:0007611,GO:0007612,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008306,GO:0008589,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0010970,GO:0015630,GO:0015631,GO:0016043,GO:0019219,GO:0019220,GO:0019222,GO:0021532,GO:0021915,GO:0022414,GO:0022607,GO:0022611,GO:0023051,GO:0023057,GO:0030030,GO:0030031,GO:0030326,GO:0030705,GO:0030990,GO:0030992,GO:0031076,GO:0031110,GO:0031113,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0031347,GO:0031348,GO:0031399,GO:0031400,GO:0031503,GO:0032101,GO:0032102,GO:0032268,GO:0032269,GO:0032271,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032504,GO:0032648,GO:0032688,GO:0032838,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035295,GO:0035735,GO:0035869,GO:0036064,GO:0036342,GO:0040011,GO:0040024,GO:0042073,GO:0042221,GO:0042325,GO:0042326,GO:0042330,GO:0042509,GO:0042532,GO:0042592,GO:0042733,GO:0042995,GO:0043009,GO:0043010,GO:0043053,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043900,GO:0043901,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045184,GO:0045879,GO:0045892,GO:0045934,GO:0045936,GO:0045992,GO:0045995,GO:0046425,GO:0046426,GO:0046907,GO:0048513,GO:0048519,GO:0048523,GO:0048568,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048729,GO:0048731,GO:0048736,GO:0048793,GO:0048856,GO:0048878,GO:0050687,GO:0050688,GO:0050730,GO:0050732,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051093,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051493,GO:0051641,GO:0051649,GO:0051960,GO:0051961,GO:0055088,GO:0055115,GO:0060173,GO:0060255,GO:0060271,GO:0060429,GO:0065007,GO:0065008,GO:0065009,GO:0070507,GO:0070925,GO:0071840,GO:0072001,GO:0072359,GO:0080090,GO:0080134,GO:0097014,GO:0097542,GO:0097546,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901620,GO:1901621,GO:1902531,GO:1902532,GO:1902679,GO:1902903,GO:1903506,GO:1903507,GO:1904892,GO:1904893,GO:1905515,GO:2000026,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.intraciliary transport
EggNOG OGsKOG3809@1,KOG3809@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionn/a
Ec32 orthologEc-12_008870.1
Exons6
Model size714
Cds size711
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig89.20373.1prot_S-ischiensis_contig89.20373.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig89 497953..505506 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817362.3595371-CDS-S-ischiensis_contig89:497952..4980621622817362.3595371-CDS-S-ischiensis_contig89:497952..498062Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 497953..498062 +
1695741057.4115803-CDS-S-ischiensis_contig89:497952..4980621695741057.4115803-CDS-S-ischiensis_contig89:497952..498062Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 497953..498062 +
1622817362.3735123-CDS-S-ischiensis_contig89:498431..4985071622817362.3735123-CDS-S-ischiensis_contig89:498431..498507Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 498432..498507 +
1695741057.4232755-CDS-S-ischiensis_contig89:498431..4985071695741057.4232755-CDS-S-ischiensis_contig89:498431..498507Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 498432..498507 +
1622817362.3875108-CDS-S-ischiensis_contig89:499920..5000101622817362.3875108-CDS-S-ischiensis_contig89:499920..500010Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 499921..500010 +
1695741057.432701-CDS-S-ischiensis_contig89:499920..5000101695741057.432701-CDS-S-ischiensis_contig89:499920..500010Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 499921..500010 +
1622817362.4052746-CDS-S-ischiensis_contig89:502739..5028061622817362.4052746-CDS-S-ischiensis_contig89:502739..502806Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 502740..502806 +
1695741057.4444332-CDS-S-ischiensis_contig89:502739..5028061695741057.4444332-CDS-S-ischiensis_contig89:502739..502806Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 502740..502806 +
1622817362.420286-CDS-S-ischiensis_contig89:503324..5035451622817362.420286-CDS-S-ischiensis_contig89:503324..503545Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 503325..503545 +
1695741057.5095909-CDS-S-ischiensis_contig89:503324..5035451695741057.5095909-CDS-S-ischiensis_contig89:503324..503545Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 503325..503545 +
1622817362.4336255-CDS-S-ischiensis_contig89:505359..5055061622817362.4336255-CDS-S-ischiensis_contig89:505359..505506Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 505360..505506 +
1695741057.5259352-CDS-S-ischiensis_contig89:505359..5055061695741057.5259352-CDS-S-ischiensis_contig89:505359..505506Schizocladia ischiensis KU_0333CDSS-ischiensis_contig89 505360..505506 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig89.20373.1

>prot_S-ischiensis_contig89.20373.1 ID=prot_S-ischiensis_contig89.20373.1|Name=mRNA_S-ischiensis_contig89.20373.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=237bp
DRPKLSEKLLGKPPFRYLHDIISAVTAATGFGEGLYTGDELDSGAIKDKA
AKIAYLEKIISLVGICHGRAVDVRPGKIVAGLEPERTNELLALLGKAAKS
PDVDGRGAVRQALAGEGPQPSASRRNSRRDSERSIGGGGPAVAPPQEPAP
AKEAPEMPQDRGGGGGARHDSQPMAMAKSVDQPGDDDKAAAKLEMEEMGA
AAKAMDVPQSRRIASRGAPRAEAKGAAGDMPATGEAS
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mRNA from alignment at S-ischiensis_contig89:497953..505508+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig89.20373.1 ID=mRNA_S-ischiensis_contig89.20373.1|Name=mRNA_S-ischiensis_contig89.20373.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7556bp|location=Sequence derived from alignment at S-ischiensis_contig89:497953..505508+ (Schizocladia ischiensis KU_0333)
GACAGGCCAAAACTTTCGGAGAAGCTTCTGGGAAAACCGCCCTTCCGGTA
CTTACACGACATCATCAGCGCCGTCACGGCCGCCACGGGCTTTGGCGAAG
GCCTCTACACGTGAGCGCCCGTGAACAGGATGGCATCCTGGGGGGATTGA
AGGACTTATGGCGCCTCCATTCGAATAGAGTTGTCGTCGAAGTCATTTCA
TACCCAGGTAGTCTCGATGCTGGTGAGTTTTCGAATGGGTTTATGGTGCA
AAGTCGGATCAGGAGCTCGCGGTGGTAACTTGATGCACAGGTACGCTTCT
GCATGGGCGCGTATGGTGTCAGGCTTGCTCCTCCCAAGTACAAGTACGCT
TCCAAGAAATGCGCGTACACTCACACTGTCCAGTATAGCCTTGCAGTGGC
TGAATTACTGTGTATGCCATGAGATTTTGAGGTCAAGCACCCCATGCACG
CATCTGTGTACAATGTGTTGTGCATGCAGAGGTGATGAGCTGGACTCCGG
AGCCATCAAGGACAAGGCAGCAAAGATTGCCTACCTGGAAAAAATCATTT
CACTGGTGAGTGTGTCGGGTGCGCGCTACAGGCCTGCAGAGATTTGCTGC
CAGCCACTGTAATGTAATGCAATGCAATGTGATGCACCTCGCCCTGTGTT
CTTCCGGTTAGTAATGAAGTGTAAATGAGCATCCATGAGTTGTGCACTCA
TACAATTTTTATGAGTGTAAGCTAAGCAAGGGAAATTGTGGCCAACAAAT
CCTGAACAATCTCTTGCCACGAGCAACAACCCACCAAGTAACCTAAACCC
TAAGTACTGGAATTTCCTGCTGAAGTGGACACTGCCCCAGCCGCTATATG
CAATTAAGCGGTGTCAGTGTTTATACTGTATGCGTGCAGGCCGCCAAGCG
CAGCTTTTAAAATTTGTCGTATCCTAAGATTGCCCGAAATCGGCCGAATA
TCTGCCGCATCAACCCTTGTCGACCATAACTCAACCTGTTCCCGCCCAAA
CACTGCAACATTTCCGATAGAGTGGCTTGGTGGCGCCCATCGCAGGTTTG
GCAGCCCCACTGCTGCAGTCTCCAGTGGGTTACGGCGTGTGTTTTTCAGC
CGGCCACCAACCATTTTCTACTTCCGGAAGTAGCAAGTACTGGTTTTCTG
CTGCTACTGCAATAGTACTAGCATGAAGTTTTCTACTTCAGCAGGAACAT
GAGGTACTGTAGCAAGTAGTAGAGCATATTTAGTGGTAGTAGTGTAGAGG
AAAGCTCTAGAGCTCTATAGGTGATACGTATCAATTGGCTTGTCTGGCGA
CATAACCTTGCGTGCTTGGTCGACAGTCCTCATTTTGAAATTCATGTTTG
ATTCCGACGGGAGTAGCTATTTAGCCATGGACTCTCGCTTCCCAACTAGG
CCGGGATGGAGCACGCGCTAGGGGTGCAGTAGGTAGTACGTACTGAAAGT
ACTGTACTCGAGACGAGTACACCTACAGTAGTCGTAGGTAAAGTTTACCG
TCTACTCTACTACTAGTAGTACTTCACAGTAGAGGAGTAGGTCAACTGTG
TTTGCAACAGTGATGAGTGTTGCGCGCTGGAGTATTTTCATTGTTTATGT
TTCTGCTCCATGTCGGTCGAGGCGTATGGTCAATGGTCTCGGGACTCTGG
CACGAGTTTTACAACTTGCGTACTGTACTTTAAAGTACTTGAAGTACATA
TACTTCGAATTATATACAAAGTACATAGTATTGAGTACCTAGATGAAGGT
ATATAACATAGAGCTCCACATAACCCGTACGTCCTCTCTTGTACCACATG
TAGCAGTACTGCGGTAGTTGTTGTGCGTGCCTTCCTCGGATAGAGCTCTA
CGAGTACTGTTCCCTCTCATCTCTACAAGCAGGCTCACTACCTTGCCCAA
CTACTCTAGCTAGTACTGCACTTGTCGTTGATGTACCTGGCTGAACCTTC
CCCCTTGACTCCCCTCAGGTGGGCATATGCCATGGACGCGCGGTTGATGT
GCGACCAGGGAAAATTGTGGCTGGCCTTGAGCCGGAGCGCACCAACGAGC
TGCTAGCTGTGAGTATGTATAGTACGTGAATACTTGTACTTCCTCCGGAC
CACATTATTATACACAGTTTGTTTGGTGGCCCTGCACGCTGCATATGCTG
CGTGCCAACGCATGCCGTTTATCAGTCGCATATGTCATGCCCACCCCTTA
CCACCTTAAAAAATTTCAGCTGAAACGCTGAAGTGGTTCTGGAGTTATGG
GCCAGTGACTGAACCCCAATTTTGAACCTCCAGGGTGGGGCCGCGACTTG
CTTGACAGCGCCGCTGCTGCAGTTGCGACGCTCGTCTGTGGGTTGTGAGA
GTTAGATTTTTGCGCTGTTTCTTGCTTCAGGGAGCCAATCAACTCAGCTA
TCCGTGCGGCAAATTTGGGCACCAACGGACGAATGTATCGTATCGCGTAT
CGCATCTTTCCCGGGCCGTATCGGGCCGTCCAGGGGCCAATCGGACGCGC
ACGCTGTTCTCAAGCTACGGGTCGAATTAGCAAGCGGAGTCTGGCACGAT
GGATTGCTCTCATCGAGAACAACATTCTGACAATTTTCATCGAAATTGGA
ATTGTGGTTCCGATGTTATGAGCATAAAACCGATTTTGCCCGATTTCACC
GCATCGTACGTACGTACGTACGTATGATATGGGTGGATTTTTTCTCTCTG
AAACGGAAATTTTTGGGGTGGTGAACGCAAAGGTGAAAGTTGCGGCCCGA
TCGGAGGGCTAGAGCTCGAGTTGTCGCTCTCTGAAGTTAGCACCTGCGAT
TCATGCTCAAAATCGGGTCATTCTAGCGCATGTGTTTTTGGGGGTGAACA
CAATTCGCCGCACTCAAACGTCCGTATCTCGAGAACTACTGGGCCAATTT
TGCGCATTTTTGGGGTGTTAGGAACTTCAAGAGACTGCCGTCACGATGGT
TTATTATTCGTTTGTGAAAGACCGTCACAGCAACGTTCACACCCTCTAAA
AAGCTGTGTATAACAAAGCGGTCCGCAGGAAGTATGTACCAAGTACTTAG
CATACTCACGTTGCACTTGCTGTGAGCATGTCCTACTACTCCTACTACAG
TACTTATACCTGCAACTGCTTGGCTTGCTCGAGCGGTATCTCACACTACA
GTACAGTACAATGTAGAGTCCAATATTCAGTACTGTGTATGGTACCATGT
ACAGCACAATGTAGAGTGTTGCTACCGCGTTCTGCAGCCATTCAGGCGGG
CCCCGCTGGGGCCAAGGGGGCCACTAGTGTACGGTACTTACAAGTACAAG
AGTGCTGTAGCTCTTGTGCCGAGTAGTGTGCGCTACAATACTTCCAGGTA
GTTGTTGCGCTATCAAGTAATATGCTAATTGGGTAAATACTACATAGTGT
ACCGTGCTTCCAAGTAGTGTACTGCTGTAAAGTAGTATTCAAAATAGCTG
GTGCAGTGAACCGCTCAATTTTGTTTTTTTTCCCACTTCCTACCACGGAG
CACGTATGTATAGGCCACTCCATTCCATGTTGCCGATTCCGGCCGTCTCT
TGCATCAAAGCACACCCGGCTTGATGCCCATCGTCACCAATGTTGTTAAG
TTATAATTCGTACGAGTACCACTTAGTACATGGTGGAAACCGGCCCTGAA
ATGCCGGTTTTCTCGTGTGATGGTGTATCGAACGGAAAGAAAGAAAGCCT
TCTCCGTTGGCTTTGGAGTACGGCCATGGTGTATACGAGATACCAGGTAT
AGGTATGAATTCAGAGGGTCATCATGAACACGGAGGGTCATCCAGGATTC
TTTTCCGCAATGCTGGCAAGGTCAATGATCTCGGGACTGCGGCAAGCACA
ACGCGAGTACATATACTTCTATCACTGGATTGCCTCAATTCGGTAGTAGT
GTACTTGGAAAAATGTAGCAGGGACCCTTATCTACAGCAGTGGTCTGAAC
ATGAAAACATACTTCCAAGCATACTCTCGAGTACTCGTACTTTTTGTGCT
TTCGCCATCCCACACCTGGCCACAGCGCTAAACAAACACCCTGAAGAAAC
TGGCCGGCCCGGGCGCCCGCCCATCAGCATCGCCAAGTTTGGCGCCACTT
GACCCATGTCCGAGCCCGGGCGGTGAAGTGCCCAAAAAATGGGCCCGCAG
CCCGAAAATTTTGGCCTCGTCCACCCAAATGGGAGCCCACCCAAATGGGG
GCTCCCAGGCACTATTTTGTGGGCGGAGGAGCAAAAAAATTAGGCAGGGG
TGGTGCCCATGGCACCACGAAAGTTAGGCGGCCTGCGGCTGAATACCGCT
TGTTTGAGCGGGCCGCCCAAACAGAGACCTGTTTGTTTAGCACTGCCTGG
CCATGTCAGGTACCGGGTCATCGCAGAATGGTGCTGTTGCCGCCACGGCC
GCCCTGTGAAACCTGAGTTCACTGTGTGCCAGTTGAGGTACTGTCGAATA
CCAGTTTGTTTGAACTTGTGAACTGGCAAGGGCGGTGGGTTGGAATGGTA
CTTCCGGAAGTAACCAGCATCGCAGCCAGGTCGGTTCGGCTGTTCTTTTA
CGGCAAGCGTTTGCGCGACAACGGCTATGTTTCGGCCGAAACCGGCGATA
GCGGTAATAGTGCCGCTGTCCGCCGGCTATATCGAACGTCGAAATATGCA
CGATTTCAAAGGAGAAAACCTGGAGAAACCGGGCAAGGCTTCGGCCTGTT
TACCGATCGGCCGGTTAACCGGAACCGACCGGCAAAAACCGGCTCCGGTT
CACAGCTCTTTTGTTTGCACGCAAATGTCTCTGGCAGCTCCTGGGGAAGG
CGGCCAAGTCTCCAGACGTCGACGGACGAGGGGCAGTTCGCCAAGCCCTT
GCCGGTGAGTAGTGTGATTGTTCTTTGAAAGTGATAGTGTAGGGACTGCG
ATGGACAGGTAGTGTCACAGCGAATGGGACTGATTCAGAATACTTACCAT
TCATGCCAATTGCTACTCGTACTAGTGTAAGTGCTGCATAGTACGAAGTA
CTTCGTACGTGTACCTACGCTGTGCCAGTAATACCTACGGTGCAAAATAT
TCATGAGAAATCATCGGAGGTTCTCCGGGCTATGACCAGCACAGTACATC
AGGACTGCGGCATCTCACTACTGTGCGGTACAAGTACAATACTCGAACAG
TGTGCACTCTTGTGCGCTTGTCGTGCCAATATAGAGTAGACCATTTACAT
CCACCATGCGCCTGCCGGGAGGGATGACATCAAAGTCTTCTCATCATCAG
TTGCTTGTTTTCTGGTTTGACAGGTCTCGTCCACCTCCCAAACCTTGGAC
AGGATATGTACACCACTGTAGGAGATAATATCTGACGGACAATTCCTCTG
CGCCTGACACCCAACACCCCAGGCGAAGGCCCGCAGCCTAGTGCTTCCCG
CAGGAACAGCCGCCGGGACTCGGAGAGGTCCATCGGTGGAGGAGGACCAG
CCGTGGCCCCACCCCAAGAGCCAGCGCCTGCCAAGGAAGCTCCGGAAATG
CCTCAGGACAGGGGGGGGGGCGGAGGGGCGCGGCATGATAGCCAACCCAT
GGCCATGGCTAAGAGCGTGGACCAGCCCGGTGACGACGACAAGGTTTGTT
GGGTGTAGCTACATTTCTAGTGTGCATACATATCCTACTGTACTCGTAGA
GTAGTGACGTGCAGAAACCAGTGTAGTAAGTGTCTTTGGTGGAGCTGCTT
GGATATTGCAGGACCGAGGGCCAGTGGTTCAGGTGAGGGACCACAATGGT
CACAGTCGTGCCCAATGCAAGGTCAAGGTGAAGATGACTGGGTCCCACAC
CCATTGACTGCAAGGGAGTAGTGGGTGCAGATAAGACGCTCTGGTACTAC
TCGAGTACAGTACTGTAGTACTAGCAGCAACGCAGGGCGAGGTGCAGGCC
ACGTCACCAAAGACCTCAGCAAGTGGCCCTTCCTTAGCTCGCCAGGGGAG
GGGGTTGTGCGCGGGGAAGGGCGGGGGGGAAGGAAGGGGGAGGAAGAGGA
GGAGGGGGAGGAGAAGGGAGGACGAGGAAGGAGAGGAGGGGAAGGGGGGT
GCCCCCAGGGGGGGGTGGGGGGTCGTGTCACAAGCGACGACGCGGTGTAG
GCATTGACAGAGCAGGCAGAATCACCACGCCGCGTACCTGCATCAGGGAA
GTGAGCAAACAGGGATCACCGTGTGAGAGGGGGACCCCTGAACCGCAAGC
AGCAAGCACCGAACACCTTGCTGACACCAGGAACACTAGTCTATGCAACA
GCACAATGGTGTGGCCGACACCAGAAGGCTCAGTCCGCAGTCGCTAACCA
CAAGTGGTGTGCAGCAGTACTACAGCACTAAGTACTATACCTACAAGTAT
AGTACATGGTACGAAGGCCGCACAGGCTTTGAAAGGCGAACCGTGTGCGT
TTTTGTGTGTTCAGCTACCGGAGTGCTCGAGATCGAGGTATTTGCCACCC
ACAATGGGAAGGACGAACATACAGGCAGGCAGGCAAACAAGTACTTCCAA
GTATGAATGTACGAAGTAACAGGCTTCTCATGTAGGTTCAGGAGTGCTTA
GCACCCATACACGGTTGTACGAGGCTCACTGACCATATGGATTGGTGGAT
ATTCTAAAGTATATTTGAAGTGCTTTGAAGTACTTGGATTCCACTTGTCC
TCCTGCATTGTGCTGGTACAGTACTCAAACATGTCGTATTGGTACTACAC
TAGTACTGCGCTCGATCAATCGGGTGGTCCAGGAATCTCCCAGGTCGCCG
TTTCGAATCCCCCAGGGGGGCGCGATTTTCCGCAAGAATGGGCCTTTCAT
GAACGTAGGCGCAAGGAAGATGTACGGGTTGCACGATAGTCAATCGTCCG
GCTTGCTCGCCTGATCAAGGGACAATGGTGGAAATGCCGTTGTCCCGGGG
GTAATGGCGAGCCGAGGATCGGTGTGCGACCCGTCGCTTGGCCGGTGAGA
ACCCGGCATGCTCTGTCCCGGCGAAATTGTAGGGACGCGTGGCCATTGGC
CGAAAGGCTACCCTGCGGGGGCTGGCCGGCGGTCCAGCAAGTAGTAGACT
GGGCCGACGGTCGGTGGCATGTACACGAAGGGGTGCCCCCTGTCCGACTT
GAATACACACACTACACTAGCACTGGCATCTGACTGCATGTGGGCGGTCT
GCTGCAGGTGGGCCAGTGACTTGGTGATGTCTCTATCAGTTGCTCTTCCA
TACACTTGCCTTGCTCTGCCAGGTCACATCTCCGTGATCGTACTTACTGT
AATGTGGGCTTGGTTGCTCCGGACTATTTGGCAAGGGTCCAGCCATCCCC
GCCCTACAATCCACACAATCGCGGACTGCCAACCCCGACTACTACTGGTT
GAGCTGTGGGAGGTTCGTTCATGCCTAATTGACGCTCGCCTGCTACTGAC
TCATCAGGCAGCAGCCAAGCTGGAAATGGAGGAGATGGGTGCGGCTGCCA
AAGCTATGGATGTGCCCCAGAGCCGCCGCATCGCCTCGCGCGGGGCGCCC
CGAGCAGAAGCCAAGGGGGCAGCTGGCGATATGCCTGCCACAGGTGAGGC
CTCTGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig89:497953..505508+

>mRNA_S-ischiensis_contig89.20373.1 ID=mRNA_S-ischiensis_contig89.20373.1|Name=mRNA_S-ischiensis_contig89.20373.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1422bp|location=Sequence derived from alignment at S-ischiensis_contig89:497953..505508+ (Schizocladia ischiensis KU_0333)
GACAGGCCAAAACTTTCGGAGAAGCTTCTGGGAAAACCGCCCTTCCGGTA
CTTACACGACATCATCAGCGCCGTCACGGCCGCCACGGGCTTTGGCGAAG
GCCTCTACACGACAGGCCAAAACTTTCGGAGAAGCTTCTGGGAAAACCGC
CCTTCCGGTACTTACACGACATCATCAGCGCCGTCACGGCCGCCACGGGC
TTTGGCGAAGGCCTCTACACAGGTGATGAGCTGGACTCCGGAGCCATCAA
GGACAAGGCAGCAAAGATTGCCTACCTGGAAAAAATCATTTCACTGAGGT
GATGAGCTGGACTCCGGAGCCATCAAGGACAAGGCAGCAAAGATTGCCTA
CCTGGAAAAAATCATTTCACTGGTGGGCATATGCCATGGACGCGCGGTTG
ATGTGCGACCAGGGAAAATTGTGGCTGGCCTTGAGCCGGAGCGCACCAAC
GAGCTGCTAGCTGTGGGCATATGCCATGGACGCGCGGTTGATGTGCGACC
AGGGAAAATTGTGGCTGGCCTTGAGCCGGAGCGCACCAACGAGCTGCTAG
CTCTCCTGGGGAAGGCGGCCAAGTCTCCAGACGTCGACGGACGAGGGGCA
GTTCGCCAAGCCCTTGCCGCTCCTGGGGAAGGCGGCCAAGTCTCCAGACG
TCGACGGACGAGGGGCAGTTCGCCAAGCCCTTGCCGGCGAAGGCCCGCAG
CCTAGTGCTTCCCGCAGGAACAGCCGCCGGGACTCGGAGAGGTCCATCGG
TGGAGGAGGACCAGCCGTGGCCCCACCCCAAGAGCCAGCGCCTGCCAAGG
AAGCTCCGGAAATGCCTCAGGACAGGGGGGGGGGCGGAGGGGCGCGGCAT
GATAGCCAACCCATGGCCATGGCTAAGAGCGTGGACCAGCCCGGTGACGA
CGACAAGGCGAAGGCCCGCAGCCTAGTGCTTCCCGCAGGAACAGCCGCCG
GGACTCGGAGAGGTCCATCGGTGGAGGAGGACCAGCCGTGGCCCCACCCC
AAGAGCCAGCGCCTGCCAAGGAAGCTCCGGAAATGCCTCAGGACAGGGGG
GGGGGCGGAGGGGCGCGGCATGATAGCCAACCCATGGCCATGGCTAAGAG
CGTGGACCAGCCCGGTGACGACGACAAGGCAGCAGCCAAGCTGGAAATGG
AGGAGATGGGTGCGGCTGCCAAAGCTATGGATGTGCCCCAGAGCCGCCGC
ATCGCCTCGCGCGGGGCGCCCCGAGCAGAAGCCAAGGGGGCAGCTGGCGA
TATGCCTGCCACAGGTGAGGCCTCTGCAGCAGCCAAGCTGGAAATGGAGG
AGATGGGTGCGGCTGCCAAAGCTATGGATGTGCCCCAGAGCCGCCGCATC
GCCTCGCGCGGGGCGCCCCGAGCAGAAGCCAAGGGGGCAGCTGGCGATAT
GCCTGCCACAGGTGAGGCCTCT
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