mRNA_S-ischiensis_contig89.20356.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: A0A813GRF5_POLGL (Hypothetical protein n=8 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GRF5_POLGL) HSP 1 Score: 194 bits (492), Expect = 4.540e-52 Identity = 109/267 (40.82%), Postives = 151/267 (56.55%), Query Frame = 1
Query: 196 KKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDWVLARSEQLT-LPRSCWCCC-DSAQQLAILDAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINPQFLREVVSNVINEKEYGVVMLRSGFQALWK 990
K +VIIG GP+GVHMAS L KRG+ NVT+LEAS E+GGKS + D K G+ H++GTCY+ Y PI+ L+ EY NE GG L R D D+ +G+ D +L ++E+ + +P +CW C D A + A Y LH+++ G Y YGMPPRP+ A +D A ++L KH LL +V LLRY Q+QGYGVLE VP Y++WW++P L + + + V ML G+Q+LW+
Sbjct: 18 KNKAVVIIGGGPSGVHMASQLAKRGYTNVTLLEASAELGGKSRTTVD-KDGVPHDMGTCYLSNRYGPIRDLLAEYDPGNAEVDVTNEMIFGG-----------------LQRDGDDKDYTNGVSLVDIMLEKAEEASAIPSACWPICPDFLSTPAFVSAFVNYIRLHKKLLGSYD---YGMPPRPRDFAAVDMTAMEFLNKHKLLAMVGLLRYSLQLQGYGVLETVPALYMLWWVHPNLLLGALKEPADLTQ--VTMLSKGYQSLWR 261
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: A0A813LTM0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LTM0_POLGL) HSP 1 Score: 188 bits (477), Expect = 1.310e-48 Identity = 110/270 (40.74%), Postives = 149/270 (55.19%), Query Frame = 1
Query: 196 KKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDWVLARSEQLT-LPRSCWCCCDSAQQL-AILDAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVM---WWINPQFLREVVSNVINEKEYGVVMLRSGFQALWK 990
K +VIIG GPAGVHMAS L KRG+ NVT+LEAS E+GGKS + D K GL H++GTCY+ Y PI+ L+ EY + NE GG L R D D+ +G+ D L ++E+ + +P +CW C L A + A +Y LH+++ G Y YGMPPRP A +D A ++L KH LL +V LLRY Q+QGYGVLE VP Y++ WW++P L + + ML G+Q+LW+
Sbjct: 18 KNKAVVIIGGGPAGVHMASQLAKRGYTNVTLLEASAELGGKSRTTID-KDGLPHDMGTCYLSNRYGPIRELLAEYDPDNAEVELTNEMVFGG-----------------LQRDGDDKDYTNGVSLQDVYLEKAEEASAIPSACWPICPDFLSLPAFVSASVKYIGLHKKLLGSYD---YGMPPRPSDFAAVDMTAMEFLTKHKLLAMVGLLRYSLQLQGYGVLETVPALYMLLGLWWVHPNLLLGALGDE--------TMLSKGYQSLWR 258
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: W4G6U8_9STRA (Amino_oxidase domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6U8_9STRA) HSP 1 Score: 176 bits (446), Expect = 4.040e-45 Identity = 105/267 (39.33%), Postives = 139/267 (52.06%), Query Frame = 1
Query: 187 KFKKKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDWVLARSEQLTLPRSCWCCCDSAQQLAILDAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINPQFLREVVSNVINEKEYGVVMLRSGFQALW 987
+ + D++VI+G GPAGVH ASLL K+G N+TILEASH VGGKS ++ DDK G HELGT + Y P+ LV EY P K + G P+ +Y S D D +DF VL +Q+ S Q LD RY LH +IFG Y+ YG+PPRP + +D A +L H L L L R+ Q QGYGVLE +P FY +WW++P +R ++ + + + LR GFQ LW
Sbjct: 27 QLQPSDHVVIVGGGPAGVHYASLLAKKGMLNITILEASHRVGGKSVTVVDDK-GTPHELGTVFAIPTYTPVFNLVDEYD----PLNTKFDFAYGQPN---------YLYAMGESAGGNDSDASAAVDFPHHVLQSLQQIAPNASL-----VQLQALFLDQASRYLTLHHRIFGSYT---YGLPPRPSNYTAIDMTAIDFLTTHNLTALTSLFRFAYQQQGYGVLETIPAFYFLWWMHPDSVRSILRSQVVQSSVASE-LRGGFQRLW 270
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: A0A813FIJ1_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FIJ1_POLGL) HSP 1 Score: 175 bits (443), Expect = 4.200e-43 Identity = 99/251 (39.44%), Postives = 140/251 (55.78%), Query Frame = 1
Query: 244 MASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDWVLARSEQLT-LPRSCWCCCDSAQQL-AILDAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINPQFLREVVSNVINEKEYGVVMLRSGFQALWK 990
MAS L KRG+ NVT+LEAS ++GGKS + D K GL H++GTCY+ Y PI+ L+ EY + NE GG L R D D+ +G+ D L ++E+ + +P +CW C L ++ A +Y LH+++ G Y YGMPPRP A +D A ++L KH LL +V LLRY Q+QGYGVLE VP Y++WW++P L + ++ GV ML G+Q+LW+
Sbjct: 1 MASQLAKRGYTNVTLLEASADLGGKSRTTID-KDGLPHDMGTCYLSNRYGPIRELLAEYDPDNAEVELTNEMVFGG-----------------LQRDGDDKDYTNGVSLQDVYLEKAEEASAIPPACWPICPDFLSLPGLVSASVKYIGLHKKLLGSYD---YGMPPRPSDFAAVDMTAMEFLTKHKLLAMVGLLRYSLQLQGYGVLETVPALYMLWWVHPNLL----LGALGDETEGVTMLSKGYQSLWR 226
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: A0A397A179_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A179_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.720e-42 Identity = 107/272 (39.34%), Postives = 153/272 (56.25%), Query Frame = 1
Query: 190 FKKKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDW---VLARSEQLTLPRSCWCCCDSAQQLAIL--DAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINP-QFLREVVSNVINEKEYGVVMLRSGFQALW 987
++ D +VI+G GPAG+H ASLL K+G K V +LEA VGGKS + D + G+ HELGTC+++ +Y PI L+ EY P K L P+ +V+ + G + +AD LD+ + +A + LPR+ S +L L I RY LH IFGKYS YG+PP PK + +D A ++L+++ L L LR+ QQ QGYGVLE +P FY++WW++P QFL++ +NV + LR GFQ+LW
Sbjct: 26 LRQNDRVVIVGGGPAGIHYASLLVKKGLKKVVLLEALDRVGGKSRTEID-RDGIPHELGTCFLNGVYGPIFDLLNEYD----PTNEKFVWALNAPN------YVK-VLGESIGATDADP--VTSLDYSQYNTRSIALNAPPELPRNA-----SVTELQDLVRSQIGRYIALHYAIFGKYS---YGLPPPPKDWSLIDMTAMEFLKRNNLTALEGALRFSQQQQGYGVLETIPAFYMLWWVHPDQFLKK--TNVFS--------LRKGFQSLW 265
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: A0A3L6V0A6_9STRA (Amino_oxidase domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V0A6_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.900e-41 Identity = 104/267 (38.95%), Postives = 146/267 (54.68%), Query Frame = 1
Query: 190 FKKKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDWVLARSEQLTLPRSCWCCCDSAQ-QLAILDAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINPQFLREVVSNVINEKEYGVVMLRSGFQALW 987
++ D +VI+G GPAGVH ASLL K+G KNV +LEA +GGKS + D + G+ HELGTC+++ +Y PI L+ EY P K L P+ +V+ + G + D D LD+ + + RS L P + + Q + I RY LH IFGKYS YG+PP PK + +D A ++L+++ L L +LR+ QQ QGYGVLE +P FY++WW++P L K V LR GFQ+LW
Sbjct: 27 LRQNDRVVIVGGGPAGVHYASLLVKKGLKNVVLLEALDRIGGKSRTEID-QDGIPHELGTCFLNGVYGPIFDLLSEYD----PTNQKFVWALNAPN------YVK-VLGHSIGA--GDSDTVSNLDYPHFYI-RSIALNAPPELQRNANVTELQNVVRFQIGRYIALHYAIFGKYS---YGLPPPPKDWSLIDMTAMEFLKRNNLTALEGMLRFSQQQQGYGVLETIPAFYMLWWVHPDQLL---------KSSNVYSLRKGFQSLW 266
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: A0A3L6URC1_9STRA (Amino_oxidase domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6URC1_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.580e-41 Identity = 107/272 (39.34%), Postives = 153/272 (56.25%), Query Frame = 1
Query: 190 FKKKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDW---VLARSEQLTLPRSCWCCCDSAQQLAIL--DAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINP-QFLREVVSNVINEKEYGVVMLRSGFQALW 987
++ D +VI+G GPAG+H ASLL K+G K V +LEA VGGKS + D + G+ HELGTC+++ +Y PI L+ EY P K L P+ +V+ + G + +AD LD+ + +A + LPR+ S +L L I RY LH IFGKYS YG+PP PK + +D A ++L+++ L L LR+ QQ QGYGVLE +P FY++WW++P QFL++ +NV + LR GFQ+LW
Sbjct: 26 LRQNDRVVIVGGGPAGIHYASLLVKKGLKKVVLLEALDRVGGKSRTEID-RDGIPHELGTCFLNGVYGPIFDLLNEYD----PTNEKFVWALNAPN------YVK-VLGESIGATDADP--VTSLDYSQYNTRSIALNAPPELPRNA-----SVTELQDLVRSQIGRYIALHYAIFGKYS---YGLPPPPKDWSLIDMTAMEFLKRNNLTALEGALRFSQQQQGYGVLETIPAFYMLWWVHPDQFLKK--TNVFS--------LRKGFQSLW 265
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: A0A6A5A4B6_9STRA (Amino_oxidase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A4B6_9STRA) HSP 1 Score: 159 bits (401), Expect = 7.020e-41 Identity = 100/273 (36.63%), Postives = 144/273 (52.75%), Query Frame = 1
Query: 178 GADKFKKKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYG-LETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDWVLARSEQLTLPRSCWCCCDSAQQLAILDA-IKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINPQFLREVVSNVINEKEYGVVMLRSGFQALWK 990
G + D IVI+G GPAGVH A+LL K+GF N+TILE SHEVGGKS ++ D + G HELGTCY LY P+ L+KEY TL P + + G +A+ Q +D++ + L + Q P + +A +DA Y LH I G Y YG+PPRP + L+ F++L+++ LL L R+ Q QGYG L+E P FY++WW++P +R+ + + + V +L G+Q+LWK
Sbjct: 31 GGINMGRNDRIVIVGGGPAGVHYATLLVKKGFTNITILEQSHEVGGKSKTVLDPQGGYPHELGTCYATALYQPVFDLLKEYDPTNTL-------IPF-----------IPTVKGHTWVNRDAN---QSVVDYNRYALQLAVQAVGPSPL------PKLMATVDAAFASYISLHTSILGVYD---YGLPPRPSNWTRLNMTGFEFLKQNKLLVLEGFFRFVFQQQGYGSLDESPAFYMLWWVHPDTIRQKQAADSKGQPW-VYVLSKGYQSLWK 272
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: W4FBM9_9STRA (Amino_oxidase domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FBM9_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.390e-40 Identity = 105/268 (39.18%), Postives = 147/268 (54.85%), Query Frame = 1
Query: 187 KFKKKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDWVLARSEQLTLPRSCWCCCDSAQ-QLAILDAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINPQFLREVVSNVINEKEYGVVMLRSGFQALW 987
K ++ D +VI+G GPAGVH ASLL K+G KNV +LEA +GGKS + D + G+ HELGTC+++ +Y PI L+ EY P K L P+ +V+ + G + D D LD+ + + RS L P + + Q + I RY LH IFGKYS YG+PP PK + +D A ++L+++ L L +LR+ QQ QGYGVLE +P FY++WW++P L K V LR GFQ+LW
Sbjct: 26 KLRQNDRVVIVGGGPAGVHYASLLVKKGLKNVVLLEALDRIGGKSRTEID-QDGIPHELGTCFLNDVYGPIFDLLSEYD----PTNQKFVWALNAPN------YVK-VLGHSIGA--GDSDTVSNLDYPHFYI-RSIALNAPPELQRNANVTELQNVVRFQIGRYIALHYAIFGKYS---YGVPPPPKDWSLIDMTAMEFLKRNNLTALEGMLRFSQQQQGYGVLETIPAFYMLWWVHPDQLL---------KSSNVYSLRKGFQSLW 266
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Match: A0A3R7WP67_9STRA (Amino_oxidase domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WP67_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.690e-40 Identity = 107/272 (39.34%), Postives = 153/272 (56.25%), Query Frame = 1
Query: 190 FKKKDNIVIIGAGPAGVHMASLLKKRGFKNVTILEASHEVGGKSYSIWDDKQGLTHELGTCYMHYLYDPIQALVKEYGLETLPGGGKNETPLGGPSGRFKGEHVRQIYGSDLSRPNADGDFQHGLDFDDW---VLARSEQLTLPRSCWCCCDSAQQLAIL--DAIKRYNHLHEQIFGKYSDKYYGMPPRPKSTAGLDTPAFQWLEKHGLLPLVPLLRYGQQVQGYGVLEEVPIFYVMWWINP-QFLREVVSNVINEKEYGVVMLRSGFQALW 987
++ D +VI+G GPAG+H ASLL K+G K V +LEA VGGKS + D + G+ HELGTC+++ +Y PI L+ EY P K L P+ +V+ + G + +AD LD+ + +A + LPR+ S +L L I RY LH IFGKYS YG+PP PK + +D A ++L+++ L L LR+ QQ QGYGVLE +P FY++WW++P QFL++ +NV + LR GFQ+LW
Sbjct: 98 LRQNDRVVIVGGGPAGIHYASLLVKKGLKKVVLLEALDRVGGKSRTEID-RDGIPHELGTCFLNGVYGPIFDLLNEYD----PTNEKFVWALNAPN------YVK-VLGESIGATDADP--VTSLDYSQYNTRSIALNAPPELPRNA-----SVTELQDLVRSQIGRYIALHYAIFGKYS---YGVPPPPKDWSLIDMTAMEFLKRNNLTALEGALRFSQQQQGYGVLETIPAFYMLWWVHPDQFLKK--TNVFS--------LRKGFQSLW 337 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig89.20356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig89.20356.1 >prot_S-ischiensis_contig89.20356.1 ID=prot_S-ischiensis_contig89.20356.1|Name=mRNA_S-ischiensis_contig89.20356.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=311bp MGNGSSIQGPYGSKKRALKGADKFKKKDNIVIIGAGPAGVHMASLLKKRGback to top mRNA from alignment at S-ischiensis_contig89:235591..248971+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig89.20356.1 ID=mRNA_S-ischiensis_contig89.20356.1|Name=mRNA_S-ischiensis_contig89.20356.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=13381bp|location=Sequence derived from alignment at S-ischiensis_contig89:235591..248971+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig89:235591..248971+ >mRNA_S-ischiensis_contig89.20356.1 ID=mRNA_S-ischiensis_contig89.20356.1|Name=mRNA_S-ischiensis_contig89.20356.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1866bp|location=Sequence derived from alignment at S-ischiensis_contig89:235591..248971+ (Schizocladia ischiensis KU_0333)back to top |