mRNA_S-ischiensis_contig88.20329.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: D8LKH8_ECTSI (N-carbamoylputrescine amidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH8_ECTSI) HSP 1 Score: 424 bits (1090), Expect = 1.300e-145 Identity = 222/344 (64.53%), Postives = 250/344 (72.67%), Query Frame = 2
Query: 68 RAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWG-GETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
R VTVAATQM+C P + NA AAEALVRRAA GAQVILLQELFS+ YFCQEQ+EEHF LAE+ +S LL RF ALA+ELGVVLPVSFFER NNA FNSV VFDADG LG+YRKSHIP GPGYQEKFYFNPGDTGFKV++T+FG+IGVAICWDQWFPEAAR+MALQGAELLLYPTAIGSEPQDPTL+S HWRRVMQGHA AN+VPVVASNR+G E + S ITFYG+SF+ADQTG +V +C P G++E G EV L TFDL+ +R+QR GWGLFRDRRP LY PL++LDG
Sbjct: 5 RLVTVAATQMSCSPDAKDNADAAEALVRRAAAAGAQVILLQELFSTRYFCQEQREEHFLLAESEHESALLARFQALAKELGVVLPVSFFERGNNAFFNSVVVFDADGGHLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFDTQFGKIGVAICWDQWFPEAARSMALQGAELLLYPTAIGSEPQDPTLNSSAHWRRVMQGHAGANLVPVVASNRVGREEYPGSHITFYGSSFIADQTGEIVVECSYIPSNRGDSEGGDGTAIGASRMGAASAAAQPGHSRHFCCGEPGGPGG---------------EVILHTFDLEGVRLQRAGWGLFRDRRPSLYRPLLSLDG 333
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: UPI00187310A0 (N-carbamoylputrescine amidase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI00187310A0) HSP 1 Score: 391 bits (1005), Expect = 2.180e-133 Identity = 205/343 (59.77%), Postives = 237/343 (69.10%), Query Frame = 2
Query: 68 RAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
R VTVAA+QMAC REAN A AEALVR AAG GAQV+L+QELF + YFCQ+QK E+FALA+ E + +L R ALA EL VVLPVSFFER+NNAH+NS+A+ DADG LGVYRKSHIP GPGYQEKFYFNPGDTGF+VW+TR+G +G ICWDQWFPE ARAMAL GAE+L YPTAIGSEPQD +L+SR HW+R MQGHAAANMVP+VASNRIG E ++S+TFYG+SF+AD TGA +A+ ET+ A V A+FDLDAI QR WGLFRDRRPDLYGPL+T DG
Sbjct: 2 RKVTVAASQMACSWDREANVAGAEALVREAAGQGAQVVLIQELFETPYFCQDQKREYFALAQPVEGNTVLARMSALAAELSVVLPVSFFERANNAHYNSLAMVDADGSVLGVYRKSHIPDGPGYQEKFYFNPGDTGFRVWKTRYGTLGSGICWDQWFPECARAMALMGAEILFYPTAIGSEPQDASLNSREHWQRTMQGHAAANMVPLVASNRIGREAGDNASLTFYGSSFIADPTGAKLAEA------NETDRA---------------------------------------------------VITASFDLDAIAEQRASWGLFRDRRPDLYGPLLTADG 287
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: A0A7V2RUP4_9PROT (N-carbamoylputrescine amidase n=3 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2RUP4_9PROT) HSP 1 Score: 390 bits (1003), Expect = 4.380e-133 Identity = 206/343 (60.06%), Postives = 234/343 (68.22%), Query Frame = 2
Query: 68 RAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
R VTVAA QMACG RE N AAE LVR AA GA ++LLQELF + YFC++QK EHFALA D PLL R LA ELGVVLPVSFFER+NNA+FN+VAV DADG QLG+YRKSHIP GPGYQEK+YFNPGDTGF+VW+TRF RIGV ICWDQWFPEAARAMAL GAELLLYPTAIGSEPQDP LDSR HW+RVMQGHAAANM+PVVA+NRIGTE ++TFYG+SF+ D GA++A+ G E+A V A FDL+A+ +R GWGLFRDRRPDLY L++LDG
Sbjct: 2 REVTVAAIQMACGWDRERNVRAAERLVREAAAAGAGIVLLQELFETPYFCKDQKAEHFALAGEAGDHPLLARMADLAAELGVVLPVSFFERANNAYFNAVAVIDADGRQLGIYRKSHIPDGPGYQEKYYFNPGDTGFRVWQTRFARIGVGICWDQWFPEAARAMALMGAELLLYPTAIGSEPQDPELDSRDHWQRVMQGHAAANMLPVVAANRIGTERGESCTLTFYGSSFITDGRGAILARA------GREEEA---------------------------------------------------VITARFDLEALARERAGWGLFRDRRPDLYLTLLSLDG 287
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: A0A369T7D0_9PROT (N-carbamoylputrescine amidase n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369T7D0_9PROT) HSP 1 Score: 390 bits (1002), Expect = 6.000e-133 Identity = 204/343 (59.48%), Postives = 234/343 (68.22%), Query Frame = 2
Query: 68 RAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
R VTVAATQMAC EAN A AEALVR AA GA V+L+QELF + YFC++Q+++ FALA E P L R ALAREL VVLPVSFFER+NNAH+NS+A+ DADG LGVYRKSHIP GPGYQEKFYFNPGDTGF+V++TR GR+G AICWDQWFPE ARAMALQGAE+L YPTAIGSEPQDPT+DSRGHW+R MQGHAAAN P+VASNRIG E ++TFYG SF+AD TGA+VA+ GG+ A E+ ATFDL+ + QR WGLFRDRRPDLYGPL+TLDG
Sbjct: 2 RRVTVAATQMACTWDTEANVATAEALVREAAAAGANVVLIQELFETPYFCKDQRQDLFALARPAERHPTLARMAALARELEVVLPVSFFERANNAHYNSLAMVDADGEVLGVYRKSHIPDGPGYQEKFYFNPGDTGFRVFDTRHGRLGAAICWDQWFPECARAMALQGAEILFYPTAIGSEPQDPTIDSRGHWQRAMQGHAAANCTPLVASNRIGREEGESCALTFYGHSFIADNTGAIVAEA-----GGD----------------------------------------------------AREIVTATFDLEEMAAQRASWGLFRDRRPDLYGPLMTLDG 287
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: A0A843RHZ8_9PROT (N-carbamoylputrescine amidase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RHZ8_9PROT) HSP 1 Score: 388 bits (996), Expect = 5.060e-132 Identity = 202/343 (58.89%), Postives = 234/343 (68.22%), Query Frame = 2
Query: 68 RAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
R +TVAATQMAC REAN A AEALVR AAG GAQV+L+QELF + YFC +QK+EHFALA E++PLL R ALA EL VVLPVSFFER+NNAH+NS+A+ DADG LGVYRKSHIP GPGYQEK+YFNPGDTGF+VW TR+G +G ICWDQWFPE+AR MAL GAE+L YPTAI +EPQDPTL S+ HW+R MQGHAAANMVP+V+SNRIG E + +TFYG SF+AD+ GA VA+ GE+ V ATFDLDA+RV+R WGLFRDRRPDLYGPL+T DG
Sbjct: 2 REITVAATQMACSWDREANVAGAEALVREAAGQGAQVVLIQELFETPYFCCDQKQEHFALAAPAENNPLLARMAALAAELEVVLPVSFFERANNAHYNSLAMIDADGRILGVYRKSHIPDGPGYQEKYYFNPGDTGFRVWPTRYGTLGSGICWDQWFPESARVMALMGAEILFYPTAIANEPQDPTLISKDHWQRTMQGHAAANMVPLVSSNRIGREDGEAAQLTFYGASFIADELGAKVAEAD-----GESR----------------------------------------------------AVITATFDLDALRVKRASWGLFRDRRPDLYGPLLTADG 287
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: UPI00141FBBDA (N-carbamoylputrescine amidase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00141FBBDA) HSP 1 Score: 387 bits (995), Expect = 7.180e-132 Identity = 199/343 (58.02%), Postives = 234/343 (68.22%), Query Frame = 2
Query: 68 RAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
R VTVAA+QMAC REAN A AEALVR AAG GAQ+ L+QELF + YFC +QK+E+FALA + P+L + ALA ELGVVLPVSFFER+NNAH+NS+A+ DADG LGVYRKSHIP GPGYQEKFYFNPGD+GF+VW+TR+G +G ICWDQWFPE ARAMA+ GAE+L YPTAIGSEPQDP ++SR HW+R MQGHAAAN+ P+VASNRIG E + ITFYG+SF+AD TGA VA+ ET+ A V ATFDLDA++ QR WGLFRDRRP+LYGPL+T DG
Sbjct: 2 RQVTVAASQMACSWDREANVAGAEALVREAAGQGAQIALIQELFETPYFCVDQKQEYFALAHPVRNHPVLAKMSALAAELGVVLPVSFFERANNAHYNSLAMIDADGTNLGVYRKSHIPDGPGYQEKFYFNPGDSGFRVWQTRYGTLGAGICWDQWFPECARAMAVMGAEILFYPTAIGSEPQDPAINSRDHWQRTMQGHAAANLTPLVASNRIGREEGEAAGITFYGSSFIADPTGAKVAEA------NETDRA---------------------------------------------------VITATFDLDAVQAQRASWGLFRDRRPELYGPLLTSDG 287
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: A0A1Y6BSQ1_9HYPH (N-carbamoylputrescine amidase n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6BSQ1_9HYPH) HSP 1 Score: 382 bits (980), Expect = 1.510e-129 Identity = 196/341 (57.48%), Postives = 234/341 (68.62%), Query Frame = 2
Query: 74 VTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
+T+AATQMAC EAN AE LVR AA GA V+LLQELF + YFC +QKE FALA +D+P++ RF LA+ELGVVLPVSFFER+NNAH+NS+A+ DADG LG+YRKSHIP GPGYQEK+YFNPGDTGF+VW+TRFGR+GV ICWDQWFPE ARAMAL+GAE+LLYPTAIG EPQDPT+DS GHW+R MQGHAAANMVP+VASNRIG+E +++TFYG+SF+AD+ GA +A+ ++D EV AT DLD IR +R WG +RDRRPDLY PL+TLDG
Sbjct: 4 ITLAATQMACDWDSEANLKRAEGLVREAAAKGADVVLLQELFETPYFCPDQKEALFALARPFKDNPVVARFADLAKELGVVLPVSFFERANNAHYNSIAIADADGAVLGLYRKSHIPDGPGYQEKYYFNPGDTGFRVWDTRFGRLGVGICWDQWFPECARAMALKGAEVLLYPTAIGIEPQDPTIDSLGHWQRAMQGHAAANMVPLVASNRIGSEPSEAATMTFYGSSFIADELGAKLAEA--------SQDR-------------------------------------------------QEVVTATVDLDRIRARRASWGFYRDRRPDLYRPLLTLDG 287
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: UPI0019084A7A (N-carbamoylputrescine amidase n=2 Tax=Rhodovibrio TaxID=85274 RepID=UPI0019084A7A) HSP 1 Score: 380 bits (976), Expect = 4.960e-129 Identity = 202/343 (58.89%), Postives = 231/343 (67.35%), Query Frame = 2
Query: 68 RAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
R +TVAATQMAC N AEALVR+AA GA ILLQELF + YFC++QK E F LA E P++ RF LARELGVVLP+SFFER+NNAH+NS+A+ DADG LGVYRKSHIP GPGYQEKFYFNPGDTGF V++T FGR+G AICWDQWFPEAARAMALQGAE+L YPTAIGSEPQDPTLDSRGHW+RVMQGHA AN++P+VASNRIG E ++TFYG SFVAD TGA++A+ G + E A ATFDLDA+ QR WGLFRDRRP+LY PL+TLDG
Sbjct: 2 REITVAATQMACSWDTHDNLDRAEALVRQAASDGANAILLQELFETPYFCKDQKAELFKLARPFEGHPVIARFAELARELGVVLPISFFERANNAHYNSLAMVDADGAILGVYRKSHIPDGPGYQEKFYFNPGDTGFMVFDTHFGRMGTAICWDQWFPEAARAMALQGAEVLFYPTAIGSEPQDPTLDSRGHWQRVMQGHAGANLMPLVASNRIGAEPGDSCTVTFYGRSFVADPTGALLAEA-----GEDRETA----------------------------------------------------VAATFDLDALANQRAAWGLFRDRRPELYDPLLTLDG 287
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: A0A2H6B2V8_9BACT (N-carbamoyl-D-amino acid hydrolase n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6B2V8_9BACT) HSP 1 Score: 379 bits (974), Expect = 1.110e-128 Identity = 201/343 (58.60%), Postives = 227/343 (66.18%), Query Frame = 2
Query: 68 RAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
R VTVAATQMACGP E N A AE LVRRAAG GA ++LLQELF+ LYFC+++ HFALA + SPLL R LA ELGVVLPVSFFER+NNA+FNSVAV DADG LGVYRKSHIP GPGYQEK+YF+PGDTGF+VW TR GRIGV ICWDQWFPEAAR M L GAE+LLYPTAIGSEPQDP DS HW+ VM+GHAAANMVPVVASNRIG E D ++TFYG SF+AD GAVVA+ + V LA FDL+ + +R WGLFRDRRP+LY PL++LDG
Sbjct: 2 RQVTVAATQMACGPDAEENIARAERLVRRAAGEGANLVLLQELFAHLYFCKDEDPAHFALATPVDASPLLRRMRRLAAELGVVLPVSFFERANNAYFNSVAVIDADGSLLGVYRKSHIPDGPGYQEKYYFSPGDTGFRVWRTRAGRIGVGICWDQWFPEAARVMVLAGAEILLYPTAIGSEPQDPDYDSSDHWQTVMRGHAAANMVPVVASNRIGRESGRDCTLTFYGRSFIADARGAVVAEA---------------------------------------------------------DRASEAVLLARFDLERLERERAAWGLFRDRRPELYVPLLSLDG 287
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Match: A0A521W8B1_9GAMM (N-carbamoylputrescine amidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521W8B1_9GAMM) HSP 1 Score: 375 bits (962), Expect = 6.620e-127 Identity = 192/341 (56.30%), Postives = 232/341 (68.04%), Query Frame = 2
Query: 74 VTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLYFCQEQKEEHFALAEATEDSPLLGRFGALARELGVVLPVSFFERSNNAHFNSVAVFDADGMQLGVYRKSHIPGGPGYQEKFYFNPGDTGFKVWETRFGRIGVAICWDQWFPEAARAMALQGAELLLYPTAIGSEPQDPTLDSRGHWRRVMQGHAAANMVPVVASNRIGTELFTDSSITFYGTSFVADQTGAVVAQCPPYPWGGETEDAPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVALATFDLDAIRVQRLGWGLFRDRRPDLYGPLVTLDG 1096
VTVAATQMACGP R AN A AE L+R+AA GA VIL+QELF S YFC+E + EHFALA +++P + R A+A ELGVVLP+S FER+++A FN++ + DADG +LG+YRKSHIP GPGY EK+YF+PGDTGF+VW TRFG +G A+CWDQWFPEAAR MAL+GAE+LLYPTAIGSEPQDPTLDSR HW+R MQGHAAAN++P+VASNRIGTE ++FYG SF+AD TGA++A E +D + +V A+FDL AIR R WGLFRDRRPDLY PL+TLDG
Sbjct: 3 VTVAATQMACGPDRHANIAGAERLIRQAAAQGANVILVQELFESPYFCKEHRAEHFALALPLDENPAIARLAAVAAELGVVLPLSVFERAHHACFNTLVIVDADGSRLGIYRKSHIPEGPGYHEKYYFSPGDTGFRVWPTRFGTLGAAVCWDQWFPEAARVMALRGAEILLYPTAIGSEPQDPTLDSRPHWQRTMQGHAAANVMPLVASNRIGTECGAAVEMSFYGHSFIADHTGAIIA---------EADD------------------------------------------------HSEQVLTASFDLAAIRDYRRAWGLFRDRRPDLYAPLLTLDG 286 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig88.20329.1 >prot_S-ischiensis_contig88.20329.1 ID=prot_S-ischiensis_contig88.20329.1|Name=mRNA_S-ischiensis_contig88.20329.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=346bp MSRRAVTVAATQMACGPIREANAAAAEALVRRAAGLGAQVILLQELFSSLback to top mRNA from alignment at S-ischiensis_contig88:504938..510228- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig88.20329.1 ID=mRNA_S-ischiensis_contig88.20329.1|Name=mRNA_S-ischiensis_contig88.20329.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5291bp|location=Sequence derived from alignment at S-ischiensis_contig88:504938..510228- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig88:504938..510228- >mRNA_S-ischiensis_contig88.20329.1 ID=mRNA_S-ischiensis_contig88.20329.1|Name=mRNA_S-ischiensis_contig88.20329.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2076bp|location=Sequence derived from alignment at S-ischiensis_contig88:504938..510228- (Schizocladia ischiensis KU_0333)back to top |