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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1828 |
| Cds size | 1824 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817355.827053-CDS-S-ischiensis_contig88:405343..406363 | 1622817355.827053-CDS-S-ischiensis_contig88:405343..406363 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 405344..406363 + |
| 1695741052.1408348-CDS-S-ischiensis_contig88:405343..406363 | 1695741052.1408348-CDS-S-ischiensis_contig88:405343..406363 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 405344..406363 + |
| 1622817355.8426003-CDS-S-ischiensis_contig88:406555..406645 | 1622817355.8426003-CDS-S-ischiensis_contig88:406555..406645 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 406556..406645 + |
| 1695741052.1533058-CDS-S-ischiensis_contig88:406555..406645 | 1695741052.1533058-CDS-S-ischiensis_contig88:406555..406645 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 406556..406645 + |
| 1622817355.8559282-CDS-S-ischiensis_contig88:407911..408366 | 1622817355.8559282-CDS-S-ischiensis_contig88:407911..408366 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 407912..408366 + |
| 1695741052.1744103-CDS-S-ischiensis_contig88:407911..408366 | 1695741052.1744103-CDS-S-ischiensis_contig88:407911..408366 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 407912..408366 + |
| 1622817355.8665085-CDS-S-ischiensis_contig88:408583..408814 | 1622817355.8665085-CDS-S-ischiensis_contig88:408583..408814 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 408584..408814 + |
| 1695741052.1849144-CDS-S-ischiensis_contig88:408583..408814 | 1695741052.1849144-CDS-S-ischiensis_contig88:408583..408814 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 408584..408814 + |
| 1622817355.877887-CDS-S-ischiensis_contig88:409641..409669 | 1622817355.877887-CDS-S-ischiensis_contig88:409641..409669 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 409642..409669 + |
| 1695741052.1948495-CDS-S-ischiensis_contig88:409641..409669 | 1695741052.1948495-CDS-S-ischiensis_contig88:409641..409669 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 409642..409669 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig88.20319.1 >prot_S-ischiensis_contig88.20319.1 ID=prot_S-ischiensis_contig88.20319.1|Name=mRNA_S-ischiensis_contig88.20319.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=608bp
GAPGENLQVAPTPSPTKYPAPAQNLQVTPTPSPTKYPGAPGGVALVTMTF RLTLESDVGEDDVEAEAGGGVATGLTATNADASVVGTPPAGAGHPRGSRT RRRRRLRGSDALPVAEGSAASFGLSPTADSRVAFQDLRVRGPDAPADRSQ SASGVSPTRAESPGTFQDLGRRGSDAPAAERSVSGLLSPTTAESPGVFQD LGLRGSDALAEGSASSLLPPTTAEFQSPGAFQDLRPRGPHAPAEREKSAT GGFSPTGAKSSGAFQDLYALQQLVLPERRAMGRGLAEVFSLEQENGQSPA ELAAAAVEAFAGAGGGFAAMTEASGFAEELLSVSGLGFSQVEGVELLSRD PSVLWGGLSSESVSAEDSSQEILRPSAAEWALSAALMAALCGASGLAACS CSAAATAAAKARRLSPDELLGLGITQADGGSCLSADDSGSDELEEPDGGE GTGTGSLSSGGGGGSGLGGRGGTGHHNVHHRHVRYQHSSSGSTGSGSSSS HGSASTSRNSSSSWTPQARTLRPGQTRKMGRKPLGGSGSRAGTSEEPEWP LSLPHSHFEPESGGASGGGGGPGGLSGGGSAGGVLAGSAGAGAAAREQRR WSTCGPSS back to topmRNA from alignment at S-ischiensis_contig88:405344..409671+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig88.20319.1 ID=mRNA_S-ischiensis_contig88.20319.1|Name=mRNA_S-ischiensis_contig88.20319.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4328bp|location=Sequence derived from alignment at S-ischiensis_contig88:405344..409671+ (Schizocladia ischiensis KU_0333) GGCGCCCCGGGCGAGAACCTTCAGGTGGCGCCGACCCCGTCCCCGACCAA
GTACCCCGCCCCAGCCCAGAACCTACAGGTGACGCCGACGCCGTCCCCGA
CCAAGTATCCCGGGGCCCCCGGTGGTGTCGCCCTCGTCACCATGACGTTT
CGGCTAACCTTGGAGTCGGATGTTGGTGAGGATGATGTGGAAGCGGAAGC
GGGCGGGGGCGTGGCCACGGGACTCACGGCCACCAATGCAGATGCCTCCG
TGGTGGGAACTCCCCCCGCGGGGGCCGGCCACCCCAGGGGGTCGAGGACG
AGGAGGAGGAGGCGTCTAAGGGGGTCAGATGCGCTGCCAGTGGCGGAGGG
GTCTGCTGCCAGCTTTGGTCTCTCACCAACCGCCGATAGCCGTGTAGCCT
TTCAAGATCTGAGGGTAAGGGGGCCAGATGCGCCAGCGGACAGGTCTCAG
TCTGCCAGTGGTGTCTCACCAACACGGGCTGAGAGCCCTGGGACCTTTCA
AGATCTGGGGCGAAGGGGGTCAGATGCGCCGGCGGCGGAGAGGTCTGTGA
GCGGTCTTCTCTCACCAACAACAGCCGAGAGCCCTGGCGTCTTTCAAGAT
CTGGGGCTAAGGGGGTCAGATGCGCTGGCGGAGGGGTCTGCCAGCAGTCT
TCTCCCACCAACAACAGCCGAGTTTCAGAGCCCTGGGGCCTTTCAAGATC
TGAGGCCAAGGGGCCCACATGCACCGGCCGAGAGGGAGAAGTCTGCCACT
GGTGGTTTCTCACCAACAGGGGCCAAGAGCTCTGGGGCCTTTCAAGATCT
ATACGCGCTGCAGCAGCTTGTCCTTCCCGAGAGGAGGGCTATGGGGAGAG
GGCTGGCGGAGGTTTTTTCATTGGAGCAGGAGAACGGGCAGTCCCCGGCG
GAGCTGGCGGCCGCCGCCGTGGAGGCGTTCGCGGGGGCGGGCGGGGGTTT
CGCGGCCATGACGGAGGCGTCTGGGTTTGCCGAGGAGCTGCTCTCCGTGT
CGGGGCTGGGGTTCTCACAGGTGGGCGGGGGGGGGTTGGGGGGGCAGCCG
AGCTGGGAAGATGACGGACAGCACGATGATGATTGGTGATTCATATAAAT
TGTAACGTGTGACAGAAGTGCATTTTTAACCTTCTCATTTTTAGTCTGTG
CTTTCCCAAAAAATAAGACTACCTTTGATGACCTTTTCCCGCCCCCATCC
GTGCCTTCCCAGGTGGAAGGCGTTGAGCTGCTGTCCCGTGACCCCTCCGT
CCTGTGGGGGGGGTTGTCTTCCGAGTCGGTGTCTGCGGAGGACTCATCAC
AGGTGACTAAGAAAACTTCGCCAAGTGAACCGGAGTCGGACCTAAGCTGG
AGTACAATGCACTTTAGTAGTGCCCGTACTTCCAAGTACTTTAGTAGTTG
TCACCTGGCGCACAAAGCTTCTGCAAGAAGGCTAACAAGCGAGTGGGAAA
GAAGAGGTGTCCCTACTGTACGCGAGTTCACAAAGTTCTGCAGGCAACAT
TTTTGTACTTCAAAGTACTTCGAGTGCAATAGTTGATTGTTGTTGGACTG
GCGACTGGGCTCTGTCCCAGCACCTGAGGTGTATTGTGTACTTCGAAGTG
CCAAGTGTTGCAATCCCACTCTCCCACGCCGACAACAACGAACCCGGCCC
GCCTTCCAGGAAATCCCGCACCCCTCCCCCTCGGAGTGGGCCCTCTCGGA
GGCCCTCGTGGCCTCCCTCTGCGCCAAATAGCCTCATCATAGGTCTAATT
ACCCCAAATCAACTCCAATTAAGGGCCTAAAAGGGCACCACTTAGGGACT
AAGGGCCAACCCTGCCTACTCGTACCGTACTGTACTGCTACTTCCTGCAA
GTCTCCCATCTCACTACAGTAGTACGAGGTACGAGAACATTCAATCTCAC
ACATGTGCGATTGTACCTCGTTACAATGTATATGAATCACCGCCCATCCC
AGTCTCCCATGCCGACACCAACACCGACAATGCCTCCCGCCCTCCAGGAA
ATCCCGCGCCCTGCCTGCTCGTACTCGTACTGTACTGCTACGCCCTGCAA
GTCTCCCATCCCACTCTCCCGCGCCGGAGACGTGTTCGACACATTCCCCC
ATACGGAAGACCCGATGCAGTATTTTAAGGAACAACGCGGGGCGAGGTGC
GGGCCACGTCACTAGAGAACCGATACAGTACTTTGGCGAGGAGATTTCTA
ACACTGCTGGCACCCTGACATCAACACCAACGTTCCACGCCTCCCGTCTT
CCCAGGAAAACCCCCGCCCCTCCGCTGCGGAGTGGGACCTCTCGGCGGCC
CTCATGGCCACCCTCTGCGCCAATTAGCCTCAATTTAGGTCTAACTACCC
CAAGCCAACTCTAACCAAGCGCCAAAAACGGCACCGCTTAGGGCTTCAGC
GCCAACCCTGCCTACTCGTACTGTACTGCTACATCCTGCAAGTCTCCCAT
CTCACTAGTACGAGAACACTCAATCTCACACACGTGCGATTGTACTCGTC
ACAGTACACATATTAATCATCCCACTCTCCCACATCCACACCCACAACAA
ATGCCTCCCGCCTTCCAGGAAATCCTGCGCCCCTCCGCCGCCGAGTGGGC
CCTCTCGGCGGCCCTCATGGCCGCCCTCTGCGGCGCCAGCGGCCTCGCCG
CCTGTTCCTGCTCCGCGGCCGCCACCGCCGCCGCTAAGGCCAGACGCCTT
TCCCCGGACGAACTCCTCGGGCTCGGAATCACTCAGGCTGACGGTGGAAG
CTGCCTGAGCGCCGACGACAGCGGAAGCGACGAACTTGAAGAACCCGACG
GGGGGGAGGGTACTGGTACGGGGAGCTTAAGCAGCGGCGGCGGTGGCGGT
AGTGGCCTGGGCGGCCGGGGGGGGACTGGCCATCATAATGTTCATCATCG
TCACGTACGCTACCAGCACAGCAGCAGTGGGAGCACCGGCAGCGGCAGCA
GCAGCAGCCACGGCAGCGCCAGCACGAGCAGGAACAGCAGCTCGAGCTGG
ACCCCTCAGGCTAGGACACTCAGGTAACCACGGCACAAGAGTGCGATCAT
CGATATTTCTGGTGCCCCCTGGGGGCCCCGCCCTATGAAGGACGCATCCG
GGGGATGACCGTGAAATTTTGACATGAAAGAGCTCGACTCGTGAGTGCTT
TCATTTGCGCTATTATGGCTTTCGTATCGCAACATCACATATACAGAGCA
ACAGGTCAAATCGCATTTGTTGTGCCGGGGTGACCCTCAGGCCGGGACAG
ACTCGGAAAATGGGCCGGAAACCTTTAGGGGGCTCAGGCTCCCGGGCCGG
GACGTCGGAGGAGCCTGAGTGGCCGCTGAGTCTGCCGCATAGTCACTTCG
AGCCTGAGTCTGGTGGTGCGAGCGGCGGCGGCGGCGGCCCGGGTGGCTTG
AGCGGGGGAGGGAGTGCTGGAGGTGTGCTGGCGGGCTCTGCCGGGGCGGG
TGCTGCTGCCCGTGAGCAAAGGTGACAAAGCCGCTAAGACCACAACTTAT
GCAGTAACTAGTGTTGTGAACTGGTGACGGTTTTTACCGGTCAGTTGCAG
TTAGCTGGTTTAACCGGCTAGCCGACCGGCTTGAGCGGGGGAGGGAGCCT
GAGCGGTGCGGCTGTGGTGGCGGGCTCGCGGGGGCTGCTGCCCATGACCA
GAGGTGAAAAAGTTTGTTGCTTCTTTGCCTGAATTTTTGTGCCCGGCGCG
TAAAAAGAAGGGCTTCTGCTGAGGTCCCCACCTTAGGTTGTCGGGACGGG
GCCTGGAGCTTGCATGCCATCACAACAATTGACAAAGGTGACAGAGCCGA
TGGGACCGCAACTTATGCAGTGACGCCGGCTGCGGGTTTGACCGTGACTC
AGTGACGCAGACACTTTGAGACCCACTGGCGTTTTGCGTGACATGCGAGT
ACACCTTGCCTGCTGATGTACTGTGCCAACTACGATGCGTACACGTATAA
TGCGTAGGAAAATGAGTGACTGTACACAACAGTATGGATTGAGCTAGAGT
ACACACCGCCTCACATCACATCGCAGACTACAACTCGCTGGCACTTGCGC
GACCTGTGCTGTACTCGAGTACACTTTGCCAGGCGATAGTTCTGGCATAC
TGGGGGTGCGCGCCTGAGTGACCAGGCATACACGCACTGTTGCCTTCCCT
CGCTTCTTGTTGTCTGCGTGTTGCGATCACCACCGCCACCACAACCGCCA
CCACCTCAACCCCCGCCCCCATCAACACCACAACACCCACCACCACCGCC
TCACTCGCCCCTGTCCCCGTCCCCGCCCCCCCTACCCCTCACCCACAGGA
GGTGGTCAACGTGCGGCCCATCCTCCAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig88:405344..409671+ >mRNA_S-ischiensis_contig88.20319.1 ID=mRNA_S-ischiensis_contig88.20319.1|Name=mRNA_S-ischiensis_contig88.20319.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3648bp|location=Sequence derived from alignment at S-ischiensis_contig88:405344..409671+ (Schizocladia ischiensis KU_0333) GGCGCCCCGGGCGAGAACCTTCAGGTGGCGCCGACCCCGTCCCCGACCAA GTACCCCGCCCCAGCCCAGAACCTACAGGTGACGCCGACGCCGTCCCCGA CCAAGTATCCCGGGGCCCCCGGTGGTGTCGCCCTCGTCACCATGACGTTT CGGCTAACCTTGGAGTCGGATGTTGGTGAGGATGATGTGGAAGCGGAAGC GGGCGGGGGCGTGGCCACGGGACTCACGGCCACCAATGCAGATGCCTCCG TGGTGGGAACTCCCCCCGCGGGGGCCGGCCACCCCAGGGGGTCGAGGACG AGGAGGAGGAGGCGTCTAAGGGGGTCAGATGCGCTGCCAGTGGCGGAGGG GTCTGCTGCCAGCTTTGGTCTCTCACCAACCGCCGATAGCCGTGTAGCCT TTCAAGATCTGAGGGTAAGGGGGCCAGATGCGCCAGCGGACAGGTCTCAG TCTGCCAGTGGTGTCTCACCAACACGGGCTGAGAGCCCTGGGACCTTTCA AGATCTGGGGCGAAGGGGGTCAGATGCGCCGGCGGCGGAGAGGTCTGTGA GCGGTCTTCTCTCACCAACAACAGCCGAGAGCCCTGGCGTCTTTCAAGAT CTGGGGCTAAGGGGGTCAGATGCGCTGGCGGAGGGGTCTGCCAGCAGTCT TCTCCCACCAACAACAGCCGAGTTTCAGAGCCCTGGGGCCTTTCAAGATC TGAGGCCAAGGGGCCCACATGCACCGGCCGAGAGGGAGAAGTCTGCCACT GGTGGTTTCTCACCAACAGGGGCCAAGAGCTCTGGGGCCTTTCAAGATCT ATACGCGCTGCAGCAGCTTGTCCTTCCCGAGAGGAGGGCTATGGGGAGAG GGCTGGCGGAGGTTTTTTCATTGGAGCAGGAGAACGGGCAGTCCCCGGCG GAGCTGGCGGCCGCCGCCGTGGAGGCGTTCGCGGGGGCGGGCGGGGGTTT CGCGGCCATGACGGAGGCGTCTGGGTTTGCCGAGGAGCTGCTCTCCGTGT CGGGGCTGGGGTTCTCACAGGGCGCCCCGGGCGAGAACCTTCAGGTGGCG CCGACCCCGTCCCCGACCAAGTACCCCGCCCCAGCCCAGAACCTACAGGT GACGCCGACGCCGTCCCCGACCAAGTATCCCGGGGCCCCCGGTGGTGTCG CCCTCGTCACCATGACGTTTCGGCTAACCTTGGAGTCGGATGTTGGTGAG GATGATGTGGAAGCGGAAGCGGGCGGGGGCGTGGCCACGGGACTCACGGC CACCAATGCAGATGCCTCCGTGGTGGGAACTCCCCCCGCGGGGGCCGGCC ACCCCAGGGGGTCGAGGACGAGGAGGAGGAGGCGTCTAAGGGGGTCAGAT GCGCTGCCAGTGGCGGAGGGGTCTGCTGCCAGCTTTGGTCTCTCACCAAC CGCCGATAGCCGTGTAGCCTTTCAAGATCTGAGGGTAAGGGGGCCAGATG CGCCAGCGGACAGGTCTCAGTCTGCCAGTGGTGTCTCACCAACACGGGCT GAGAGCCCTGGGACCTTTCAAGATCTGGGGCGAAGGGGGTCAGATGCGCC GGCGGCGGAGAGGTCTGTGAGCGGTCTTCTCTCACCAACAACAGCCGAGA GCCCTGGCGTCTTTCAAGATCTGGGGCTAAGGGGGTCAGATGCGCTGGCG GAGGGGTCTGCCAGCAGTCTTCTCCCACCAACAACAGCCGAGTTTCAGAG CCCTGGGGCCTTTCAAGATCTGAGGCCAAGGGGCCCACATGCACCGGCCG AGAGGGAGAAGTCTGCCACTGGTGGTTTCTCACCAACAGGGGCCAAGAGC TCTGGGGCCTTTCAAGATCTATACGCGCTGCAGCAGCTTGTCCTTCCCGA GAGGAGGGCTATGGGGAGAGGGCTGGCGGAGGTTTTTTCATTGGAGCAGG AGAACGGGCAGTCCCCGGCGGAGCTGGCGGCCGCCGCCGTGGAGGCGTTC GCGGGGGCGGGCGGGGGTTTCGCGGCCATGACGGAGGCGTCTGGGTTTGC CGAGGAGCTGCTCTCCGTGTCGGGGCTGGGGTTCTCACAGGTGGAAGGCG TTGAGCTGCTGTCCCGTGACCCCTCCGTCCTGTGGGGGGGGTTGTCTTCC GAGTCGGTGTCTGCGGAGGACTCATCACAGGTGGAAGGCGTTGAGCTGCT GTCCCGTGACCCCTCCGTCCTGTGGGGGGGGTTGTCTTCCGAGTCGGTGT CTGCGGAGGACTCATCACAGGAAATCCTGCGCCCCTCCGCCGCCGAGTGG GCCCTCTCGGCGGCCCTCATGGCCGCCCTCTGCGGCGCCAGCGGCCTCGC CGCCTGTTCCTGCTCCGCGGCCGCCACCGCCGCCGCTAAGGCCAGACGCC TTTCCCCGGACGAACTCCTCGGGCTCGGAATCACTCAGGCTGACGGTGGA AGCTGCCTGAGCGCCGACGACAGCGGAAGCGACGAACTTGAAGAACCCGA CGGGGGGGAGGGTACTGGTACGGGGAGCTTAAGCAGCGGCGGCGGTGGCG GTAGTGGCCTGGGCGGCCGGGGGGGGACTGGCCATCATAATGTTCATCAT CGTCACGTACGCTACCAGCACAGCAGCAGTGGGAGCACCGGCAGCGGCAG CAGCAGCAGCCACGGCAGCGCCAGCACGAGCAGGAACAGCAGCTCGAGCT GGACCCCTCAGGCTAGGACACTCAGGAAATCCTGCGCCCCTCCGCCGCCG AGTGGGCCCTCTCGGCGGCCCTCATGGCCGCCCTCTGCGGCGCCAGCGGC CTCGCCGCCTGTTCCTGCTCCGCGGCCGCCACCGCCGCCGCTAAGGCCAG ACGCCTTTCCCCGGACGAACTCCTCGGGCTCGGAATCACTCAGGCTGACG GTGGAAGCTGCCTGAGCGCCGACGACAGCGGAAGCGACGAACTTGAAGAA CCCGACGGGGGGGAGGGTACTGGTACGGGGAGCTTAAGCAGCGGCGGCGG TGGCGGTAGTGGCCTGGGCGGCCGGGGGGGGACTGGCCATCATAATGTTC ATCATCGTCACGTACGCTACCAGCACAGCAGCAGTGGGAGCACCGGCAGC GGCAGCAGCAGCAGCCACGGCAGCGCCAGCACGAGCAGGAACAGCAGCTC GAGCTGGACCCCTCAGGCTAGGACACTCAGGCCGGGACAGACTCGGAAAA TGGGCCGGAAACCTTTAGGGGGCTCAGGCTCCCGGGCCGGGACGTCGGAG GAGCCTGAGTGGCCGCTGAGTCTGCCGCATAGTCACTTCGAGCCTGAGTC TGGTGGTGCGAGCGGCGGCGGCGGCGGCCCGGGTGGCTTGAGCGGGGGAG GGAGTGCTGGAGGTGTGCTGGCGGGCTCTGCCGGGGCGGGTGCTGCTGCC CGTGAGCAAAGGCCGGGACAGACTCGGAAAATGGGCCGGAAACCTTTAGG GGGCTCAGGCTCCCGGGCCGGGACGTCGGAGGAGCCTGAGTGGCCGCTGA GTCTGCCGCATAGTCACTTCGAGCCTGAGTCTGGTGGTGCGAGCGGCGGC GGCGGCGGCCCGGGTGGCTTGAGCGGGGGAGGGAGTGCTGGAGGTGTGCT GGCGGGCTCTGCCGGGGCGGGTGCTGCTGCCCGTGAGCAAAGGAGGTGGT CAACGTGCGGCCCATCCTCCGAGGTGGTCAACGTGCGGCCCATCCTCC back to top
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