mRNA_S-ischiensis_contig88.20307.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: D7FIU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU3_ECTSI) HSP 1 Score: 108 bits (270), Expect = 2.960e-24 Identity = 76/172 (44.19%), Postives = 94/172 (54.65%), Query Frame = 2
Query: 173 PKLARDEGGHKRSARAHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYS-MSSEGSDNESTDGGGSLSGEKAPRSPVEDKG-----------------RAMMEEMMKDVNRRLPGQEELRHERQARWDSDVSDMGDEDKDKEQVKKFRQQRVKHYNEFQELQAWRAKHRAKG 634
P AR ++ + H++WDE TIAEHDK RG RQ+IDEPSTPY+Y S SS GSD ES DG G R + ++M DV+ LP + LR ERQARWDSDVS+ G +DKE+ +KF+Q R HYNEF+ LQ WR K G
Sbjct: 11 PPEARPRSQDRKRSEVHITWDEPTIAEHDKLRGTRQKIDEPSTPYHYGSGESSTGSDCESADGKGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRRGSILKVMADVSAALPSESALRKERQARWDSDVSE-GSSREDKEKARKFKQHREAHYNEFKALQEWRDKRSGDG 181
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: A0A5D6XSA3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSA3_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.820e-12 Identity = 58/150 (38.67%), Postives = 80/150 (53.33%), Query Frame = 2
Query: 200 HKRSARAHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGGSLSG-EKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDSDVSDMGDE---DKDKEQVK-----KFRQQRVKHYNEFQELQAWRAKH 622
H+ + + HVSWDEETIAEHD RG RQ+IDEP+TPY+YY+ + G + E SLSG E AP + + ++ V +R + WDS+ D G ++D E K KF +R HYNEF+ ++AWR H
Sbjct: 21 HQHAEKPHVSWDEETIAEHDLLRGTRQKIDEPNTPYHYYAAEAAG-EGELASPARSLSGREDAPSLEWGE-----LHSKLQSVKQRA-----------SDWDSNSDDEGGAHFAERDAEGKKIAKDPKFASKRKMHYNEFERVKAWRQSH 153
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: A0A662XHR8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHR8_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.740e-12 Identity = 66/187 (35.29%), Postives = 93/187 (49.73%), Query Frame = 2
Query: 170 EPKLARDEGGHKRSAR--AHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGG-----SLSGEKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDS-------------------DVSDMGDEDKDKEQVK-----KFRQQRVKHYNEFQELQAWRAKHRAKGD 637
+P +RDE SA AHV+WDEETIA HD +RG R +IDEP+TPY+YY GS+ E+ D GG SLSG + + P+E KG +E + V +++ WDS + +G +D E K KF ++R HYNEF+ ++AW+ +H A D
Sbjct: 38 DPSASRDEQKPAPSAEPDAHVTWDEETIARHDLERGTRMKIDEPNTPYHYYG----GSEMEAEDQGGVSPARSLSG-RENQPPIEVKGWGELETKLLGVQ----------DAKKSEWDSSDDXXXXXXXXXXXXXAAAEAGGIGFAARDTEGKKLQKDPKFAEKRKMHYNEFERVRAWKLQHAAGKD 209
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: A0A3R7KMJ0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KMJ0_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.050e-11 Identity = 48/159 (30.19%), Postives = 83/159 (52.20%), Query Frame = 2
Query: 197 GHKRSARAHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGGSLSGEKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDSDVSD--------MGDEDKDKEQVKK---FRQQRVKHYNEFQELQAWRAKHRAKGDS 640
GH++ +HVSWDEETIA H+ RG R +IDEP+TPY+YY+ S + +P D+ +E+ + ++++ +++ WDSD D D + +++KK F ++R HYNEF+ ++AW+ +H A+ ++
Sbjct: 30 GHQQHQDSHVSWDEETIARHNLDRGTRMKIDEPNTPYHYYAESDDAV---------------SPARSQSDQPPIQWDELQSKL-------QDVQDAKKSEWDSDDGDERSSEDIQFAARDAEGKKIKKDPQFAEKRKMHYNEFERVRAWKMQHAAEEEN 166
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: H3H518_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H518_PHYRM) HSP 1 Score: 70.5 bits (171), Expect = 4.450e-11 Identity = 50/149 (33.56%), Postives = 87/149 (58.39%), Query Frame = 2
Query: 212 ARAHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGGSLSGEKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDSDVSDMGD------EDKDKEQVKK---FRQQRVKHYNEFQELQAWRAKHRAK 631
A AHV+WDEETIA HD RG R +IDEP+TPY+YY+ EG D SLSG++A + P++ +E+ + ++++ +++ WD+ ++ + D++ +++ K F ++R HYNEF+ ++AW+ +H A+
Sbjct: 24 ADAHVTWDEETIARHDLDRGTRMKIDEPNTPYHYYA---EGDDVGGVSPARSLSGKEA-QPPIQ------WDELQSKL-------QDVKDGKKSEWDNSDNESSEGLSFAARDEEGKKIDKDPHFAEKRKMHYNEFERVRAWKMQHAAE 155
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: A0A329RKL9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RKL9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.250e-10 Identity = 50/151 (33.11%), Postives = 83/151 (54.97%), Query Frame = 2
Query: 221 HVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGGSLSGEKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDSDVSDMGD---------EDKDKEQVKK---FRQQRVKHYNEFQELQAWRAKHRAKGD 637
HV+WDEETIA HD RG R +IDEP+TPY+YY+ EG D SLSG +A + P++ +E+ + ++++ ++++ WDSD D + ++++K F ++R HYNEF+ ++AW+ +H + D
Sbjct: 27 HVTWDEETIALHDLDRGTRMKIDEPNTPYHYYA---EGDDVGGVSPARSLSGREA-QPPIQ------WDELQSKL-------QDVKDKKKSEWDSDEESSSSTSGGLQFATRDAEGKKIQKDPNFSEKRKMHYNEFERVRAWKMQHADEDD 160
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: W2QU64_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QU64_PHYPN) HSP 1 Score: 68.6 bits (166), Expect = 2.430e-10 Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 2
Query: 218 AHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGGSLSGEKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDSDVSD---------MGDEDKDKEQVKK---FRQQRVKHYNEFQELQAWRAKH 622
AHV+WDEETIA HD RG R +IDEP+TPY+YY+ EG D + SLSG +A + P++ +E+ + ++++ ++++ WDSD D + ++++K F ++R HYNEF+ ++AW+ +H
Sbjct: 26 AHVTWDEETIALHDLDRGTRMKIDEPNTPYHYYA---EGDDVGAVSPARSLSGREA-QPPIQ------WDELQSKL-------QDVKDKKKSEWDSDEXXXXXXXGGLHFAARDAEGKKIQKDPNFAEKRKMHYNEFERVRAWKMQH 155
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: G5A1H1_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5A1H1_PHYSP) HSP 1 Score: 68.2 bits (165), Expect = 3.760e-10 Identity = 52/150 (34.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query: 218 AHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGG-----SLSGEKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDSDVSDMGDEDKDKEQVK-----KFRQQRVKHYNEFQELQAWRAKHRAKGD 637
A V+WDEETIA HD RG R +IDEP+TPY+YY+ ES + GG SLSG +A + P++ ++ ++DV + + + + + S + +D E +K F Q+R +HYNEF+ ++AW+ +H A+G+
Sbjct: 28 ARVTWDEETIALHDLDRGTRMKIDEPNTPYHYYA--------ESDEHGGVSPARSLSGREA-QPPIQ---WDELQSKLQDVKDKKKSEWDSSDDESSSVSSASGGLSFAARDAEGIKLVKDPNFAQKRKQHYNEFERVRAWKMQHAAEGE 165
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: A0A8K1CPF5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPF5_PYTOL) HSP 1 Score: 67.4 bits (163), Expect = 5.190e-10 Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2
Query: 212 ARAHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGGSLSGEKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDS--DVSDMGDEDKDKEQVK-----KFRQQRVKHYNEFQELQAWRAKHRAKGD 637
++ HV+WDEETIA HD+ RG R +I+EP TPY+YY GSD+E GS + + SP E + + N EE++ +++ WDS D +D E K KF ++R +HYNEF+ ++ WR H + D
Sbjct: 4 SKPHVTWDEETIALHDQDRGTRMKIEEPKTPYHYY-----GSDDE-----GSHAAAEGVASPARSLSGKENEPSI-EWNELQVKLEEVQDRKKSEWDSSDDEESRSFAARDAEGKKIVKDPKFAEKRKQHYNEFERVKMWRQSHPDEDD 141
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Match: A0A484DW41_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DW41_BRELC) HSP 1 Score: 66.6 bits (161), Expect = 9.240e-10 Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 2
Query: 218 AHVSWDEETIAEHDKQRGLRQRIDEPSTPYNYYSMSSEGSDNESTDGGGSLSGEKAPRSPVEDKGRAMMEEMMKDVNRRLPGQEELRHERQARWDSDVSDMGDEDKDKEQVKKFRQQRVKHYNEFQELQAWRAKH 622
AHVSWDEETIA H+ RG R +IDEP+TPY+YY N++ S SG + S D+ ++ +++ N R A S DE K E+ F ++R HY EF+ ++AW+ +H
Sbjct: 22 AHVSWDEETIARHNLDRGTRMKIDEPNTPYHYY--------NDAVSPARSFSGREEQPSLQWDELQSKLQDYKDSSNTSARDNSADEKSRLASTGLQFSARNDEGKKIEKDPDFAEKRKNHYKEFERVRAWKMQH 148 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig88.20307.1 >prot_S-ischiensis_contig88.20307.1 ID=prot_S-ischiensis_contig88.20307.1|Name=mRNA_S-ischiensis_contig88.20307.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=261bp MAGMLKKPPPGKGADGEPKLARDEGGHKRSARAHVSWDEETIAEHDKQRGback to top mRNA from alignment at S-ischiensis_contig88:267077..274466+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig88.20307.1 ID=mRNA_S-ischiensis_contig88.20307.1|Name=mRNA_S-ischiensis_contig88.20307.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7390bp|location=Sequence derived from alignment at S-ischiensis_contig88:267077..274466+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig88:267077..274466+ >mRNA_S-ischiensis_contig88.20307.1 ID=mRNA_S-ischiensis_contig88.20307.1|Name=mRNA_S-ischiensis_contig88.20307.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1566bp|location=Sequence derived from alignment at S-ischiensis_contig88:267077..274466+ (Schizocladia ischiensis KU_0333)back to top |