mRNA_S-ischiensis_contig88.20305.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A848MBA7_PAELE (Histidine kinase n=1 Tax=Paenibacillus lemnae TaxID=1330551 RepID=A0A848MBA7_PAELE) HSP 1 Score: 137 bits (344), Expect = 5.700e-33 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3
Query: 348 RIRQVLMNSISNAFKFTDSGSVSTTANVHSVG----TIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEE--------NIPERNDDEHDNR-PNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
R+RQVL+N +SNA KFT+ G V A++ T+ DTGIG+SE++++RLFKPFS++ S+ R GGTGLGL +CKS+ +LMGG + +S GKG +F ++V EE + PE D E+ R PN+LV DD INR+L+ M+ + V + DG EA + Y M+FMD MP ++G
Sbjct: 284 RLRQVLINLVSNAVKFTNDGGVYIVASLKERSDKELTLEFAVKDTGIGISEEKLDRLFKPFSQLDSSMTRKYGGTGLGLAICKSLVQLMGGEIRVESNEGKGASFIFTMQVQRQEEEDGMDGSGDHPEGFDLENKERYPNLLVVDDHPINRKLIVSMMYKMGLAVDIAEDGLEAVHMASQKPYDMIFMDLQMPVMDG 480
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A437QU75_9PROT (Histidine kinase n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QU75_9PROT) HSP 1 Score: 135 bits (339), Expect = 6.870e-32 Identity = 81/210 (38.57%), Postives = 123/210 (58.57%), Query Frame = 3
Query: 327 VVLMDGIRIRQVLMNSISNAFKFTDSGS--VSTTANVHS-----VGTIPQRNADTGIGVSEDRVERLFKPFSRV--HSNRNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENIPERNDDEHD------------NRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
V++ D +R+RQVL+N + NA KFT+ G+ VS +VHS + + Q D+GIG+SE++++ +F PF +V H ++ GTGLGL +C I ELMGGS++ +S G+GTT + + E+ E+ DE D N+ ++LVADD INRR+V +L ++ VDG+EA E+ N Y +V +D MPK +G
Sbjct: 473 VLVSDVVRLRQVLLNLVGNAVKFTEKGAIAVSLDLSVHSDHDAELSLVVQ---DSGIGISENKIKAIFDPFVQVEDHRTKSYVGTGLGLAICNRIVELMGGSITMESEPGRGTTVTALFPIKFEEDRRAEKRRDEEDGRSEPLVPVRKSNKKSVLVADDSNINRRIVQGVLSRWGHDIDFAVDGQEAIEKLLENTYDLVLLDIHMPKFDG 679
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A433X626_9BACL (Histidine kinase n=1 Tax=Paenibacillus zeisoli TaxID=2496267 RepID=A0A433X626_9BACL) HSP 1 Score: 134 bits (336), Expect = 2.150e-31 Identity = 81/212 (38.21%), Postives = 123/212 (58.02%), Query Frame = 3
Query: 339 DGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQ-------RNADTGIGVSEDRVERLFKPFSRVHS--NRNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFS-----------CQVKV--GVLEENIPERNDDEHDN-----RPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
D R+RQ+L+N +SNA KFTD+GS+ T +VH + + R +DTGIG++ED+++RLF+ FS++H NR GGTGLGL +CK + ELMGGS+S +S G G+TFS Q K G L + +P + E ++ +L+A+D +N ++ +ML + + +G E EE R +Y M+FMD MP ++G
Sbjct: 891 DSSRLRQILINLVSNALKFTDTGSI--TISVHRIPAVAGPSLLLEFRISDTGIGIAEDKIDRLFQTFSQLHPVINRKYGGTGLGLAICKRMVELMGGSISAESQEGVGSTFSFTLISHDEELTLQEKACEGDLAKIVPSDGEPESEDWLQFKELKVLIAEDHPVNGQIFVQMLGRIGITADVAHNGVEVVEEVSRKRYDMIFMDIKMPVMDG 1100
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: UPI0006D558F8 (response regulator n=1 Tax=Paenibacillus dakarensis TaxID=1527293 RepID=UPI0006D558F8) HSP 1 Score: 132 bits (332), Expect = 2.550e-31 Identity = 81/205 (39.51%), Postives = 119/205 (58.05%), Query Frame = 3
Query: 327 VVLMDGIRIRQVLMNSISNAFKFTDSGSV----STTANVHSVGTIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLE--ENIPERNDDE-------HDNRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKR-NKYSMVFMDSFMPKVNG 893
++ D R+RQVL+N +SNA KFT G V S T+ DTGIG+S ++++RLFKPFS++ S+ R GGTGLGL +CKS+ ++MGG + +ST KG TF +KV E + +P+RN E + P++LVADD INR+L+ ML + + DG +A + K + Y ++FMD MP ++G
Sbjct: 277 IIYGDMGRLRQVLINLVSNAVKFTHHGGVYLGVSLVEKNEETYTLEFNIKDTGIGISANKMDRLFKPFSQLDSSMTRKYGGTGLGLAICKSLVQMMGGDIHVESTETKGATFIFTIKVNKYEKYDQLPDRNTPEVYYNLNGKNALPSVLVADDHPINRKLILSMLDKIGLSADIAEDGDQAVKLVKEGHHYDIIFMDLQMPVMDG 481
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A0M1NJ02_9BACL (Histidine kinase n=1 Tax=Paenibacillus solani TaxID=1705565 RepID=A0A0M1NJ02_9BACL) HSP 1 Score: 131 bits (330), Expect = 4.860e-31 Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 3
Query: 348 RIRQVLMNSISNAFKFTDSGSVSTTANVHSVG----TIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENIPERNDDEHDNR--------PNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNK-YSMVFMDSFMPKVNG 893
R+RQVL+N +SNA KFT+ G V A++ T+ DTGIG+S ++++RLFKPFS++ S+ R GGTGLGL +CKS+ ++MGG + +S G+G TF + V E+ +++H ++ PNIL+ DD INR+L+ ML+ + + L DGK+A E K Y M+FMD MP ++G
Sbjct: 284 RLRQVLVNLVSNAVKFTNEGGVYLVASLVKAEEDRLTLEFTVKDTGIGISGEKLDRLFKPFSQLDSSMTRRYGGTGLGLAICKSLVQMMGGEIVVESKEGQGATFVFTICVHTHEQGDLRIREEDHSDKYRLHRERQPNILIVDDHPINRKLMDSMLEKMGLKADLAEDGKQAVEMVAGPKVYDMIFMDLQMPVMDG 480
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: UPI000D110CD6 (response regulator n=1 Tax=Paenibacillus faecalis TaxID=2079532 RepID=UPI000D110CD6) HSP 1 Score: 130 bits (328), Expect = 9.550e-31 Identity = 83/206 (40.29%), Postives = 119/206 (57.77%), Query Frame = 3
Query: 324 HVVLMDGIRIRQVLMNSISNAFKFTDSGSV----STTANVHSVGTIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEE-------NIPER--NDDEHDNRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKY-SMVFMDSFMPKVNG 893
H+V D R+RQVLMN +SNA KFT+ G V S T+ DTGIG+S D++++LFKPFS++ S+ R GGTGLGL +CKS+ ++MGG + +ST G F +KV EE ++P+ N E + P++LV DD INR+L+ M+ + V L DGK+A + +Y M+FMD MP ++G
Sbjct: 276 HMVYGDMGRLRQVLMNLVSNAIKFTNQGGVYLAISLIEREGETLTLEFNIKDTGIGISADKMDKLFKPFSQLDSSMTRKYGGTGLGLAICKSLVQMMGGEIRVESTEETGAMFVFTIKVQNHEEEDQLLGRDMPDDYFNIHEDEQTPHVLVVDDHPINRKLMVSMMDKLGLNVDLAEDGKQAVDMVNAGQYYDMIFMDLQMPIMDG 481
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: UPI000476F397 (ATP-binding protein n=1 Tax=Actinoplanes globisporus TaxID=113565 RepID=UPI000476F397) HSP 1 Score: 131 bits (330), Expect = 1.110e-30 Identity = 80/203 (39.41%), Postives = 119/203 (58.62%), Query Frame = 3
Query: 297 SHHLAGVPHHVVLMDGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENI--PERNDDEHDNRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
S HLA VL D RIRQ+L+N I NA KFT+ G+V+ TA+ G I DTGIG+ DR++RLF PFS+V ++ R+ GG+GLGL++ + + E MGG ++ ST G+G+TF+ V++ + P ++LVA+D +N+R+ +L+ V+LV DG EA R K+ +V MD MP ++G
Sbjct: 361 SGHLADDCPPTVLGDESRIRQILVNLIGNAVKFTEHGAVTVTASSPGAGEIRLAVRDTGIGIPHDRLDRLFLPFSQVDASVARSYGGSGLGLVISQRLAEAMGGGIAVDSTPGQGSTFTVTVRLASTNAPVVAPAVTGAPVGRSLHVLVAEDNPVNQRVAQLLLERRGHRVELVTDGAEAVAAVHRTKFDLVLMDVQMPVLDG 563
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: UPI001666F0AD (PAS domain S-box protein n=1 Tax=Paenibacillus nasutitermitis TaxID=1652958 RepID=UPI001666F0AD) HSP 1 Score: 131 bits (330), Expect = 1.300e-30 Identity = 77/212 (36.32%), Postives = 125/212 (58.96%), Query Frame = 3
Query: 327 VVLMDGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQRNA-------DTGIGVSEDRVERLFKPFSRVHS--NRNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEE--------NIPERNDDEHD------NRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
+++ D +R+RQVL+N + NA KFTD+GS+ T + S +P ++A DTGIG+ + + +LF+ FS++H NR GGTGLGL +CK++ ELMGG + +S +G TF V VG+ ++ + ND E + + ILVA+D +N+RL+ +LQ + ++ L +G+EA E + +Y ++FMD MP ++G
Sbjct: 759 LIIGDPVRLRQVLVNLVGNAIKFTDTGSIVITVGMKSA--VPFQSALLEFKVVDTGIGIPQSKQHQLFQSFSQLHPAINRKYGGTGLGLAICKNLVELMGGIIGVESEESQGATFYFTVAVGLPDDEGEFVDSDDSASENDGEEELSDFAYEKLRILVAEDNPVNQRLLAAILQHIGCQMDLASNGEEAVEAVAKKRYDLIFMDIQMPVMDG 968
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A838VKE5_9NOST (Response regulator (Fragment) n=1 Tax=Nostocaceae cyanobacterium TaxID=2723028 RepID=A0A838VKE5_9NOST) HSP 1 Score: 130 bits (328), Expect = 1.410e-30 Identity = 77/199 (38.69%), Postives = 120/199 (60.30%), Query Frame = 3
Query: 330 VLMDGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQRNA-----DTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENIPERNDDE----HDNRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
VL D R+RQ+L+N +SNA KFT++G V +A HS+ Q DTGIG+ EDR++RLFK FS+V+S+ R GGTGLGL +CK + ELMGG + +S G+TF +KV ++ + + E +D+ ++ IL+ +D IN++++ +L + + + +G EA +R Y +V MD MPK++G
Sbjct: 361 VLGDITRLRQILVNLLSNALKFTETGGVEISAIAHSIDNSDQSEIQFAVKDTGIGIPEDRLDRLFKAFSQVNSSITRQYGGTGLGLAICKKLSELMGGKIWVESESFAGSTFYFTIKVPIVADKVEEVVEDDFLTAEEHPLKILLVEDHLINQKMIQILLDGMGYKADVSNNGLEALSALRRQSYDVVLMDVQMPKMDG 559
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A517QIE3_9PLAN (Signal transduction histidine-protein kinase BarA n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QIE3_9PLAN) HSP 1 Score: 131 bits (329), Expect = 1.720e-30 Identity = 79/200 (39.50%), Postives = 118/200 (59.00%), Query Frame = 3
Query: 339 DGIRIRQVLMNSISNAFKFTDSGSVSTTAN--VHSVGTIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENIPERNDDEHDNRPNIL------VADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRN-----KYSMVFMDSFMPKVNG 893
D RIRQV+MN +SNA KFT+ G + V + TI DTGIG+SE +RLFKPF + S R GGTGLGL++CK + ELMGGS++ +S +GKGT+F ++ + +N R+ + D N+L + DD ++NRR+ ML+ D V + VDG++ ++ +RN KY + +D+ MP ++G
Sbjct: 538 DPTRIRQVVMNLVSNAIKFTEDGRIVVIVRPGVEAEQTIELEVRDTGIGISEAAQQRLFKPFMQADSGTTRQYGGTGLGLVICKRLVELMGGSLTLESELGKGTSFYVKIPLPPATKNDLIRSRQQVDPPQNVLEGKCVMLVDDNKVNRRVAKGMLEGFDIHVDIAVDGRDLQQQFERNPDLLQKYDGMILDAMMPGIDG 737 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig88.20305.1 >prot_S-ischiensis_contig88.20305.1 ID=prot_S-ischiensis_contig88.20305.1|Name=mRNA_S-ischiensis_contig88.20305.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=186bp MDGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQRNADTGIGVSback to top mRNA from alignment at S-ischiensis_contig88:230430..231479+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig88.20305.1 ID=mRNA_S-ischiensis_contig88.20305.1|Name=mRNA_S-ischiensis_contig88.20305.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1050bp|location=Sequence derived from alignment at S-ischiensis_contig88:230430..231479+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig88:230430..231479+ >mRNA_S-ischiensis_contig88.20305.1 ID=mRNA_S-ischiensis_contig88.20305.1|Name=mRNA_S-ischiensis_contig88.20305.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1116bp|location=Sequence derived from alignment at S-ischiensis_contig88:230430..231479+ (Schizocladia ischiensis KU_0333)back to top |