mRNA_S-ischiensis_contig88.20305.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig88.20305.1
Unique NamemRNA_S-ischiensis_contig88.20305.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A848MBA7_PAELE (Histidine kinase n=1 Tax=Paenibacillus lemnae TaxID=1330551 RepID=A0A848MBA7_PAELE)

HSP 1 Score: 137 bits (344), Expect = 5.700e-33
Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3
Query:  348 RIRQVLMNSISNAFKFTDSGSVSTTANVHSVG----TIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEE--------NIPERNDDEHDNR-PNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
            R+RQVL+N +SNA KFT+ G V   A++        T+     DTGIG+SE++++RLFKPFS++ S+  R  GGTGLGL +CKS+ +LMGG +  +S  GKG +F   ++V   EE        + PE  D E+  R PN+LV DD  INR+L+  M+  +   V +  DG EA     +  Y M+FMD  MP ++G
Sbjct:  284 RLRQVLINLVSNAVKFTNDGGVYIVASLKERSDKELTLEFAVKDTGIGISEEKLDRLFKPFSQLDSSMTRKYGGTGLGLAICKSLVQLMGGEIRVESNEGKGASFIFTMQVQRQEEEDGMDGSGDHPEGFDLENKERYPNLLVVDDHPINRKLIVSMMYKMGLAVDIAEDGLEAVHMASQKPYDMIFMDLQMPVMDG 480          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A437QU75_9PROT (Histidine kinase n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QU75_9PROT)

HSP 1 Score: 135 bits (339), Expect = 6.870e-32
Identity = 81/210 (38.57%), Postives = 123/210 (58.57%), Query Frame = 3
Query:  327 VVLMDGIRIRQVLMNSISNAFKFTDSGS--VSTTANVHS-----VGTIPQRNADTGIGVSEDRVERLFKPFSRV--HSNRNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENIPERNDDEHD------------NRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
            V++ D +R+RQVL+N + NA KFT+ G+  VS   +VHS     +  + Q   D+GIG+SE++++ +F PF +V  H  ++  GTGLGL +C  I ELMGGS++ +S  G+GTT +    +   E+   E+  DE D            N+ ++LVADD  INRR+V  +L     ++   VDG+EA E+   N Y +V +D  MPK +G
Sbjct:  473 VLVSDVVRLRQVLLNLVGNAVKFTEKGAIAVSLDLSVHSDHDAELSLVVQ---DSGIGISENKIKAIFDPFVQVEDHRTKSYVGTGLGLAICNRIVELMGGSITMESEPGRGTTVTALFPIKFEEDRRAEKRRDEEDGRSEPLVPVRKSNKKSVLVADDSNINRRIVQGVLSRWGHDIDFAVDGQEAIEKLLENTYDLVLLDIHMPKFDG 679          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A433X626_9BACL (Histidine kinase n=1 Tax=Paenibacillus zeisoli TaxID=2496267 RepID=A0A433X626_9BACL)

HSP 1 Score: 134 bits (336), Expect = 2.150e-31
Identity = 81/212 (38.21%), Postives = 123/212 (58.02%), Query Frame = 3
Query:  339 DGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQ-------RNADTGIGVSEDRVERLFKPFSRVHS--NRNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFS-----------CQVKV--GVLEENIPERNDDEHDN-----RPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
            D  R+RQ+L+N +SNA KFTD+GS+  T +VH +  +         R +DTGIG++ED+++RLF+ FS++H   NR  GGTGLGL +CK + ELMGGS+S +S  G G+TFS            Q K   G L + +P   + E ++        +L+A+D  +N ++  +ML  +     +  +G E  EE  R +Y M+FMD  MP ++G
Sbjct:  891 DSSRLRQILINLVSNALKFTDTGSI--TISVHRIPAVAGPSLLLEFRISDTGIGIAEDKIDRLFQTFSQLHPVINRKYGGTGLGLAICKRMVELMGGSISAESQEGVGSTFSFTLISHDEELTLQEKACEGDLAKIVPSDGEPESEDWLQFKELKVLIAEDHPVNGQIFVQMLGRIGITADVAHNGVEVVEEVSRKRYDMIFMDIKMPVMDG 1100          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: UPI0006D558F8 (response regulator n=1 Tax=Paenibacillus dakarensis TaxID=1527293 RepID=UPI0006D558F8)

HSP 1 Score: 132 bits (332), Expect = 2.550e-31
Identity = 81/205 (39.51%), Postives = 119/205 (58.05%), Query Frame = 3
Query:  327 VVLMDGIRIRQVLMNSISNAFKFTDSGSV----STTANVHSVGTIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLE--ENIPERNDDE-------HDNRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKR-NKYSMVFMDSFMPKVNG 893
            ++  D  R+RQVL+N +SNA KFT  G V    S         T+     DTGIG+S ++++RLFKPFS++ S+  R  GGTGLGL +CKS+ ++MGG +  +ST  KG TF   +KV   E  + +P+RN  E        +  P++LVADD  INR+L+  ML  +     +  DG +A +  K  + Y ++FMD  MP ++G
Sbjct:  277 IIYGDMGRLRQVLINLVSNAVKFTHHGGVYLGVSLVEKNEETYTLEFNIKDTGIGISANKMDRLFKPFSQLDSSMTRKYGGTGLGLAICKSLVQMMGGDIHVESTETKGATFIFTIKVNKYEKYDQLPDRNTPEVYYNLNGKNALPSVLVADDHPINRKLILSMLDKIGLSADIAEDGDQAVKLVKEGHHYDIIFMDLQMPVMDG 481          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A0M1NJ02_9BACL (Histidine kinase n=1 Tax=Paenibacillus solani TaxID=1705565 RepID=A0A0M1NJ02_9BACL)

HSP 1 Score: 131 bits (330), Expect = 4.860e-31
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 3
Query:  348 RIRQVLMNSISNAFKFTDSGSVSTTANVHSVG----TIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENIPERNDDEHDNR--------PNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNK-YSMVFMDSFMPKVNG 893
            R+RQVL+N +SNA KFT+ G V   A++        T+     DTGIG+S ++++RLFKPFS++ S+  R  GGTGLGL +CKS+ ++MGG +  +S  G+G TF   + V   E+      +++H ++        PNIL+ DD  INR+L+  ML+ +  +  L  DGK+A E     K Y M+FMD  MP ++G
Sbjct:  284 RLRQVLVNLVSNAVKFTNEGGVYLVASLVKAEEDRLTLEFTVKDTGIGISGEKLDRLFKPFSQLDSSMTRRYGGTGLGLAICKSLVQMMGGEIVVESKEGQGATFVFTICVHTHEQGDLRIREEDHSDKYRLHRERQPNILIVDDHPINRKLMDSMLEKMGLKADLAEDGKQAVEMVAGPKVYDMIFMDLQMPVMDG 480          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: UPI000D110CD6 (response regulator n=1 Tax=Paenibacillus faecalis TaxID=2079532 RepID=UPI000D110CD6)

HSP 1 Score: 130 bits (328), Expect = 9.550e-31
Identity = 83/206 (40.29%), Postives = 119/206 (57.77%), Query Frame = 3
Query:  324 HVVLMDGIRIRQVLMNSISNAFKFTDSGSV----STTANVHSVGTIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEE-------NIPER--NDDEHDNRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKY-SMVFMDSFMPKVNG 893
            H+V  D  R+RQVLMN +SNA KFT+ G V    S         T+     DTGIG+S D++++LFKPFS++ S+  R  GGTGLGL +CKS+ ++MGG +  +ST   G  F   +KV   EE       ++P+   N  E +  P++LV DD  INR+L+  M+  +   V L  DGK+A +     +Y  M+FMD  MP ++G
Sbjct:  276 HMVYGDMGRLRQVLMNLVSNAIKFTNQGGVYLAISLIEREGETLTLEFNIKDTGIGISADKMDKLFKPFSQLDSSMTRKYGGTGLGLAICKSLVQMMGGEIRVESTEETGAMFVFTIKVQNHEEEDQLLGRDMPDDYFNIHEDEQTPHVLVVDDHPINRKLMVSMMDKLGLNVDLAEDGKQAVDMVNAGQYYDMIFMDLQMPIMDG 481          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: UPI000476F397 (ATP-binding protein n=1 Tax=Actinoplanes globisporus TaxID=113565 RepID=UPI000476F397)

HSP 1 Score: 131 bits (330), Expect = 1.110e-30
Identity = 80/203 (39.41%), Postives = 119/203 (58.62%), Query Frame = 3
Query:  297 SHHLAGVPHHVVLMDGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENI--PERNDDEHDNRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
            S HLA      VL D  RIRQ+L+N I NA KFT+ G+V+ TA+    G I     DTGIG+  DR++RLF PFS+V ++  R+ GG+GLGL++ + + E MGG ++  ST G+G+TF+  V++      +  P           ++LVA+D  +N+R+   +L+     V+LV DG EA     R K+ +V MD  MP ++G
Sbjct:  361 SGHLADDCPPTVLGDESRIRQILVNLIGNAVKFTEHGAVTVTASSPGAGEIRLAVRDTGIGIPHDRLDRLFLPFSQVDASVARSYGGSGLGLVISQRLAEAMGGGIAVDSTPGQGSTFTVTVRLASTNAPVVAPAVTGAPVGRSLHVLVAEDNPVNQRVAQLLLERRGHRVELVTDGAEAVAAVHRTKFDLVLMDVQMPVLDG 563          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: UPI001666F0AD (PAS domain S-box protein n=1 Tax=Paenibacillus nasutitermitis TaxID=1652958 RepID=UPI001666F0AD)

HSP 1 Score: 131 bits (330), Expect = 1.300e-30
Identity = 77/212 (36.32%), Postives = 125/212 (58.96%), Query Frame = 3
Query:  327 VVLMDGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQRNA-------DTGIGVSEDRVERLFKPFSRVHS--NRNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEE--------NIPERNDDEHD------NRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
            +++ D +R+RQVL+N + NA KFTD+GS+  T  + S   +P ++A       DTGIG+ + +  +LF+ FS++H   NR  GGTGLGL +CK++ ELMGG +  +S   +G TF   V VG+ ++        +    ND E +       +  ILVA+D  +N+RL+  +LQ +  ++ L  +G+EA E   + +Y ++FMD  MP ++G
Sbjct:  759 LIIGDPVRLRQVLVNLVGNAIKFTDTGSIVITVGMKSA--VPFQSALLEFKVVDTGIGIPQSKQHQLFQSFSQLHPAINRKYGGTGLGLAICKNLVELMGGIIGVESEESQGATFYFTVAVGLPDDEGEFVDSDDSASENDGEEELSDFAYEKLRILVAEDNPVNQRLLAAILQHIGCQMDLASNGEEAVEAVAKKRYDLIFMDIQMPVMDG 968          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A838VKE5_9NOST (Response regulator (Fragment) n=1 Tax=Nostocaceae cyanobacterium TaxID=2723028 RepID=A0A838VKE5_9NOST)

HSP 1 Score: 130 bits (328), Expect = 1.410e-30
Identity = 77/199 (38.69%), Postives = 120/199 (60.30%), Query Frame = 3
Query:  330 VLMDGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQRNA-----DTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENIPERNDDE----HDNRPNILVADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG 893
            VL D  R+RQ+L+N +SNA KFT++G V  +A  HS+    Q        DTGIG+ EDR++RLFK FS+V+S+  R  GGTGLGL +CK + ELMGG +  +S    G+TF   +KV ++ + + E  +D+     ++   IL+ +D  IN++++  +L  +  +  +  +G EA    +R  Y +V MD  MPK++G
Sbjct:  361 VLGDITRLRQILVNLLSNALKFTETGGVEISAIAHSIDNSDQSEIQFAVKDTGIGIPEDRLDRLFKAFSQVNSSITRQYGGTGLGLAICKKLSELMGGKIWVESESFAGSTFYFTIKVPIVADKVEEVVEDDFLTAEEHPLKILLVEDHLINQKMIQILLDGMGYKADVSNNGLEALSALRRQSYDVVLMDVQMPKMDG 559          
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Match: A0A517QIE3_9PLAN (Signal transduction histidine-protein kinase BarA n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QIE3_9PLAN)

HSP 1 Score: 131 bits (329), Expect = 1.720e-30
Identity = 79/200 (39.50%), Postives = 118/200 (59.00%), Query Frame = 3
Query:  339 DGIRIRQVLMNSISNAFKFTDSGSVSTTAN--VHSVGTIPQRNADTGIGVSEDRVERLFKPFSRVHSN--RNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKGTTFSCQVKVGVLEENIPERNDDEHDNRPNIL------VADDVQINRRLVFKMLQMVDAEVKLVVDGKEAFEECKRN-----KYSMVFMDSFMPKVNG 893
            D  RIRQV+MN +SNA KFT+ G +       V +  TI     DTGIG+SE   +RLFKPF +  S   R  GGTGLGL++CK + ELMGGS++ +S +GKGT+F  ++ +    +N   R+  + D   N+L      + DD ++NRR+   ML+  D  V + VDG++  ++ +RN     KY  + +D+ MP ++G
Sbjct:  538 DPTRIRQVVMNLVSNAIKFTEDGRIVVIVRPGVEAEQTIELEVRDTGIGISEAAQQRLFKPFMQADSGTTRQYGGTGLGLVICKRLVELMGGSLTLESELGKGTSFYVKIPLPPATKNDLIRSRQQVDPPQNVLEGKCVMLVDDNKVNRRVAKGMLEGFDIHVDIAVDGRDLQQQFERNPDLLQKYDGMILDAMMPGIDG 737          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A848MBA7_PAELE5.700e-3342.13Histidine kinase n=1 Tax=Paenibacillus lemnae TaxI... [more]
A0A437QU75_9PROT6.870e-3238.57Histidine kinase n=1 Tax=Hwanghaeella grinnelliae ... [more]
A0A433X626_9BACL2.150e-3138.21Histidine kinase n=1 Tax=Paenibacillus zeisoli Tax... [more]
UPI0006D558F82.550e-3139.51response regulator n=1 Tax=Paenibacillus dakarensi... [more]
A0A0M1NJ02_9BACL4.860e-3140.10Histidine kinase n=1 Tax=Paenibacillus solani TaxI... [more]
UPI000D110CD69.550e-3140.29response regulator n=1 Tax=Paenibacillus faecalis ... [more]
UPI000476F3971.110e-3039.41ATP-binding protein n=1 Tax=Actinoplanes globispor... [more]
UPI001666F0AD1.300e-3036.32PAS domain S-box protein n=1 Tax=Paenibacillus nas... [more]
A0A838VKE5_9NOST1.410e-3038.69Response regulator (Fragment) n=1 Tax=Nostocaceae ... [more]
A0A517QIE3_9PLAN1.720e-3039.50Signal transduction histidine-protein kinase BarA ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig88contigS-ischiensis_contig88:230430..231479 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score135.6
Seed ortholog evalue2.4e-29
Seed eggNOG ortholog1517681.HW45_07445
EggNOG free text desc.PhoQ Sensor
EggNOG OGs1NRP8@1224,1RR19@1236,1XT8G@135623,COG0642@1,COG2205@2
COG Functional cat.T
Best tax levelVibrionales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size893
Cds size558
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig88.20305.1prot_S-ischiensis_contig88.20305.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig88 230765..231479 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817357.1246939-UTR-S-ischiensis_contig88:230429..2307641622817357.1246939-UTR-S-ischiensis_contig88:230429..230764Schizocladia ischiensis KU_0333UTRS-ischiensis_contig88 230430..230764 +
1695741053.2101738-UTR-S-ischiensis_contig88:230429..2307641695741053.2101738-UTR-S-ischiensis_contig88:230429..230764Schizocladia ischiensis KU_0333UTRS-ischiensis_contig88 230430..230764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817357.1383135-CDS-S-ischiensis_contig88:230764..2308761622817357.1383135-CDS-S-ischiensis_contig88:230764..230876Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 230765..230876 +
1695741053.2339106-CDS-S-ischiensis_contig88:230764..2308761695741053.2339106-CDS-S-ischiensis_contig88:230764..230876Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 230765..230876 +
1622817357.1505406-CDS-S-ischiensis_contig88:230917..2311801622817357.1505406-CDS-S-ischiensis_contig88:230917..231180Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 230918..231180 +
1695741053.2462234-CDS-S-ischiensis_contig88:230917..2311801695741053.2462234-CDS-S-ischiensis_contig88:230917..231180Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 230918..231180 +
1622817357.1624565-CDS-S-ischiensis_contig88:231296..2314791622817357.1624565-CDS-S-ischiensis_contig88:231296..231479Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 231297..231479 +
1695741053.2588313-CDS-S-ischiensis_contig88:231296..2314791695741053.2588313-CDS-S-ischiensis_contig88:231296..231479Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 231297..231479 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig88.20305.1

>prot_S-ischiensis_contig88.20305.1 ID=prot_S-ischiensis_contig88.20305.1|Name=mRNA_S-ischiensis_contig88.20305.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=186bp
MDGIRIRQVLMNSISNAFKFTDSGSVSTTANVHSVGTIPQRNADTGIGVS
EDRVERLFKPFSRVHSNRNVGGTGLGLIVCKSIYELMGGSVSCQSTVGKG
TTFSCQVKVGVLEENIPERNDDEHDNRPNILVADDVQINRRLVFKMLQMV
DAEVKLVVDGKEAFEECKRNKYSMVFMDSFMPKVNG
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mRNA from alignment at S-ischiensis_contig88:230430..231479+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig88.20305.1 ID=mRNA_S-ischiensis_contig88.20305.1|Name=mRNA_S-ischiensis_contig88.20305.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1050bp|location=Sequence derived from alignment at S-ischiensis_contig88:230430..231479+ (Schizocladia ischiensis KU_0333)
CTGGCCGAGATGTCCCACGAATTGAGAAATCCGTTGAACGGTATTGTCGG CATGTCAGAACTACTCAACGACCTCGTAAACGATGGGGAAGCTCTGACGT ACGTGCAGGGAATAGACTCGTGTGGAAAGATCTTGCTGGGTCTCATTGCG GACATTCTCGACTTTTCCAAGATCGAGGCTGGTAAAGTCAAGATCGAGAC TCAGACTACGGACATTTGGGATCTTCTTGACAAGACAACCCAGATGATGT TGTCTGCATACATTAAGCCGGAGTCTGCATCGGAAGTTGAAATGATTCTC ACCATCTTGCAGGTGTGCCCCATCACGTCGTCCTGATGGATGGGATTCGC ATTAGGCAAGTTCTCATGAACTCTATTAGCAATGCCTTCAAGTTCACGGA CTCGGGGTCTGTCTCCACAACTGCGAATGTCCATTCGGTGGGCACCAGTT CGGACGAGAACTGGAAAGAGACAAGAAGCAACGCCAAGTACCTCAACGAA ACGCGGACACGGGAATTGGTGTGTCGGAGGATCGCGTGGAGAGACTGTTC AAGCCCTTTTCGCGGGTACACTCGAATAGAAACGTTGGCGGGACGGGTCT CGGTCTCATCGTGTGCAAGTCCATATACGAACTCATGGGCGGATCGGTGT CGTGCCAGAGCACCGTTGGAAAGGGTACTACCTTCAGCTGCCAAGTAAAG GTCGGTGTTCTCGAAGAAAATATTCCAGAGCGCAATGATGACGAACATGA CGTTTCTTCTCCCCCGCAAGTTTAAAAGTGGACTCTCTACGAAAAACTGC AAGACGATGCGATGAGGCCGAAAATACGAGGGACCAGAAACAAGTCGTCA AGAAGGAGTACGCGGAGAACAGACCCAATATACTAGTGGCAGATGACGTT CAGATCAACAGGCGTCTCGTGTTCAAGATGTTGCAGATGGTCGATGCGGA AGTGAAACTAGTTGTGGATGGTAAGGAAGCGTTCGAAGAGTGTAAGCGCA ACAAATACTCGATGGTGTTTATGGACTCCTTTATGCCTAAAGTGAACGGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig88:230430..231479+

>mRNA_S-ischiensis_contig88.20305.1 ID=mRNA_S-ischiensis_contig88.20305.1|Name=mRNA_S-ischiensis_contig88.20305.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1116bp|location=Sequence derived from alignment at S-ischiensis_contig88:230430..231479+ (Schizocladia ischiensis KU_0333)
ATGGATGGGATTCGCATTAGGCAAGTTCTCATGAACTCTATTAGCAATGC
CTTCAAGTTCACGGACTCGGGGTCTGTCTCCACAACTGCGAATGTCCATT
CGGTGGGCACCAATGGATGGGATTCGCATTAGGCAAGTTCTCATGAACTC
TATTAGCAATGCCTTCAAGTTCACGGACTCGGGGTCTGTCTCCACAACTG
CGAATGTCCATTCGGTGGGCACCATACCTCAACGAAACGCGGACACGGGA
ATTGGTGTGTCGGAGGATCGCGTGGAGAGACTGTTCAAGCCCTTTTCGCG
GGTACACTCGAATAGAAACGTTGGCGGGACGGGTCTCGGTCTCATCGTGT
GCAAGTCCATATACGAACTCATGGGCGGATCGGTGTCGTGCCAGAGCACC
GTTGGAAAGGGTACTACCTTCAGCTGCCAAGTAAAGGTCGGTGTTCTCGA
AGAAAATATTCCAGAGCGCAATGATGACGAACATGACTACCTCAACGAAA
CGCGGACACGGGAATTGGTGTGTCGGAGGATCGCGTGGAGAGACTGTTCA
AGCCCTTTTCGCGGGTACACTCGAATAGAAACGTTGGCGGGACGGGTCTC
GGTCTCATCGTGTGCAAGTCCATATACGAACTCATGGGCGGATCGGTGTC
GTGCCAGAGCACCGTTGGAAAGGGTACTACCTTCAGCTGCCAAGTAAAGG
TCGGTGTTCTCGAAGAAAATATTCCAGAGCGCAATGATGACGAACATGAC
AACAGACCCAATATACTAGTGGCAGATGACGTTCAGATCAACAGGCGTCT
CGTGTTCAAGATGTTGCAGATGGTCGATGCGGAAGTGAAACTAGTTGTGG
ATGGTAAGGAAGCGTTCGAAGAGTGTAAGCGCAACAAATACTCGATGGTG
TTTATGGACTCCTTTATGCCTAAAGTGAACGGCAACAGACCCAATATACT
AGTGGCAGATGACGTTCAGATCAACAGGCGTCTCGTGTTCAAGATGTTGC
AGATGGTCGATGCGGAAGTGAAACTAGTTGTGGATGGTAAGGAAGCGTTC
GAAGAGTGTAAGCGCAACAAATACTCGATGGTGTTTATGGACTCCTTTAT
GCCTAAAGTGAACGGC
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