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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 384 |
| Cds size | 360 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817355.0037262-UTR-S-ischiensis_contig88:100027..100049 | 1622817355.0037262-UTR-S-ischiensis_contig88:100027..100049 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig88 100028..100049 - |
| 1695741051.5133576-UTR-S-ischiensis_contig88:100027..100049 | 1695741051.5133576-UTR-S-ischiensis_contig88:100027..100049 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig88 100028..100049 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817355.0160644-CDS-S-ischiensis_contig88:100049..100206 | 1622817355.0160644-CDS-S-ischiensis_contig88:100049..100206 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 100050..100206 - |
| 1695741051.523366-CDS-S-ischiensis_contig88:100049..100206 | 1695741051.523366-CDS-S-ischiensis_contig88:100049..100206 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 100050..100206 - |
| 1622817355.0295484-CDS-S-ischiensis_contig88:101611..101674 | 1622817355.0295484-CDS-S-ischiensis_contig88:101611..101674 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 101612..101674 - |
| 1695741051.5337102-CDS-S-ischiensis_contig88:101611..101674 | 1695741051.5337102-CDS-S-ischiensis_contig88:101611..101674 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 101612..101674 - |
| 1622817355.0425606-CDS-S-ischiensis_contig88:102910..102975 | 1622817355.0425606-CDS-S-ischiensis_contig88:102910..102975 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 102911..102975 - |
| 1695741051.544152-CDS-S-ischiensis_contig88:102910..102975 | 1695741051.544152-CDS-S-ischiensis_contig88:102910..102975 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 102911..102975 - |
| 1622817355.053212-CDS-S-ischiensis_contig88:103265..103340 | 1622817355.053212-CDS-S-ischiensis_contig88:103265..103340 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 103266..103340 - |
| 1695741051.5547893-CDS-S-ischiensis_contig88:103265..103340 | 1695741051.5547893-CDS-S-ischiensis_contig88:103265..103340 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig88 103266..103340 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig88.20293.1 >prot_S-ischiensis_contig88.20293.1 ID=prot_S-ischiensis_contig88.20293.1|Name=mRNA_S-ischiensis_contig88.20293.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=120bp
GRGGRGSGGGSGAAVVDVIDLVCRDGSESSAPAAPRVVPQGPVVNPTRLL
AFTAHVYDVFRKLGDNDSVGIAKFVAGINASLGAETPSFGDAEAREMIVR
LDWENKIMLDDSDSVVHMV* back to topmRNA from alignment at S-ischiensis_contig88:100028..103340- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig88.20293.1 ID=mRNA_S-ischiensis_contig88.20293.1|Name=mRNA_S-ischiensis_contig88.20293.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3313bp|location=Sequence derived from alignment at S-ischiensis_contig88:100028..103340- (Schizocladia ischiensis KU_0333)
GGCAGAGGGGGCCGTGGCAGCGGCGGCGGCAGTGGGGCTGCGGTGGTCGA
TGTCATCGACCTCGTCTGCCGTGATGTAAGTGTTTCCGAGTTTTGTTCTT
CGGGGTGGTCGAGTATGCTATGGCGAGCTGGCTGGCGCTTGCAGCAATGA
TTTCATTATTTGACTGTTAGTACAAAGTACATGTAGAGCCCTAGAGTCTA
TCCCCTTCACCATGTTCGCCTAACTCTTAGATGACTTCGGTACACCTGTC
CCACGTTAAAGTCCCGGGTGTATTTCTGTGCACATATAGTTAACTGTCTT
CTGAGGGCTAAAAGAGCTTGTCCCCCCCTTCTGTCACCCCTGGTCCCGCA
CTGTTCCCTTGGCAGGGGAGTGAGAGTTCGGCTCCGGCAGCGCCGCGGGT
AGTGCCGCAAGGGCCAGTCGTGAACCCCACGTGAGTGTAACGGACACGCC
CCGTAAGTTTGTTTATTATGTACTCCTGGTCCATCTCGATCCATCAGTGG
TCTCGGGAATATGGCAAGCACAGCGTGAGTAGTGCATACATGAGTATATG
AAGTATATACGATGTTCACGTATTTCCGATTTTAGTCTCCTGTACCCTGC
TCCATCTCTACAGAGGCGCGTGGTCAATGGTCTCGGGACTACGGCAAGCA
CAACGTGAGTATCTGTGCGCATATCTGCTTGAGGTGTTTTTGCATCCGTC
TCCGAACTACTTCTACTTGCCGTGCTTTGCTGCCAAGCGCTTGGGTCCTT
TGATGCACCTTCTCCTTACGTACTCGGGTGTTTCGAGCTCATGGTCTCGG
GACTACGGCAAGCATAAAACCGCTCGAGAGCGCGCGCGCGCGCGCACACA
CACACACACACACACATATTTCGTATATATATGTACTCATTGGTTTGTCT
TGCGACATAACCTTGCGTGCAATGCCGACAGCCCTAAGTCGAAAATTCGG
GTTCGCCCTCCGACAGGAGTAGTTAATAAGCCATGGACTCTCATGCACTA
TGGACTGTAGATCTTGAAATGTAGTACTTACAGTCATAGTCTCCTAACCA
CTTGGGTTGTTCGAAACTCGGTCTCCTAACCGCTTGGAACCATTGTACGA
GCGCAGTACAGCAGAGTACAGCACATTTTAGTACAGTACTGTACGGTGCA
GTACATAGTTCTGCGCGCTAGTAGCTCATTTAGAGTCTTGTAGTACCGCG
CGCTCCCCACAAAGAGGCACGCACGCAGAGCAATCTCAAGTGAGCTGCAG
TAGGCCGGCTCTCATCTTGTCTGTCTGTCTGTTTCTCTGCAGCTTTCGTA
GGATAAGCGTCTCTGCCTGCTCTCGCTCTCCCCTGCTCTCTTTTATCTCT
CTCCGTCATCTTTCCTTTTATCTCATCTCTACACCTCCTTGTTCCCTATC
CCCCTCCGTCTCTCCCTCCCTCTCCCTCCTTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCGCTCTCTCTCTCTAGCTCTCTCTCTGTCACACGTGCACACACGCTGAC
AAACGCAACGGACGTGACGTCTGAACGCCTACCTCATGTTGAACAAACCC
ATGACTCCCGGAGCAGCCGGCTGCTGGCTTTCACGGCCCATGTCTACGAC
GTCTTCCGGAAGCTGGGCGATAATGACAGGTGTGCACTTGATTTGCCCGA
CCACAGCTATCAGAACGAACTACTGCGGTGCAGTTGCCGTAATATTTTCC
AGCCGATCCAAGTGATTTGCAGTCCACATCAGTGTCGACCTGAATTGTGT
AATGTGATGTGATTTGATGCGGTACTACGTGGTATGTACTCTAATGCCCA
GCAGTTTGACATGACATTACGTACGTCTGAGAGTTAGTCCAAGCGAGGCA
CGGTCCCCATCACTGACCTCACCAGCCCCTTTTTTGTTCGCAGACACTGC
TCTACCCGAGCACCAGTACAGCGTACTCCCGTCAACAGAATCGCGTACGC
TTCGCCCTCATTACTGTGCAGTGGTCCCCGCTTACTAGTAAGAGCGAAGT
AAACGCCTGATAGGGAAACATCCCCGGGATGCGTCAACAGCCGTGTGCAC
GCACCCAAGTGAATGTTTGTAAATACTATGGACTACATAGTACATTGGAC
ACTGGGCTGAATCAGCAACGCACATATGCTTCTATGTGCTCACGTTGTGC
TTGCTGTAGTCCCGACATTGACCGCGCGCCGTTGACGACGGAGCGATCAA
GCCGATTAGCACGAGTACGCAGATATATGTGCTTCGAAGTACTCCATATG
CACATATACGAGTAGATGTGTGTGTATGTGTGTATAGCTTTAGTGCATCG
AGGTACCATGCTTTGGCATACTGGGGCTGTTGAAACCTCAAGTACAGTAC
AGTAGCCTGAGTACATGCTTCTTTCACGAGTACGACCACCACAGCAGGCG
GTATCTTACGTGTAGGTACTCCAAGTGCTCAGGCTGTGATGGCCGTAGTC
CCGAGAGCGTTTTTTCCACGCATCTACTCGACTTTCCACGCATCTACTCG
AAGTGCGGAAAAAAAACGAGTACGAAACTACGGATCACGAGTTTCACAGG
ACCCTTGCTACAATAGTAGCAGGTAGGACACTCGGCTTCGAGACACCCCA
CGTACAAGTTGGGATACTATACTTGAAAATACTTGTGTCTATATACAGTG
TCTATATACGAGTACTCGTACATAAATGTGCGACGTGTTCTCACGCTGTG
CTTGCCGTACTCCAGACACCGTTCGTTCCAAGCATCCAACTAGTGAAAGA
GAACAAGTTTCACGGAACCCCTCGTAGTTGGGAGACTCGGTTTGAAGACA
CCCCACATGGTTTGATACTACTACTATATAGTAGTACTTGGAAATACGTG
TGCACTATATACTAGTACTTGGAAATACGTATGCACATGTATGTACGCCC
CAAGTGCTCACGCGTGCTTGCTGCAGTCCCAAGACTGTTCTTTCCAAGTA
GTTCAGGAGAACGACTTTCACAGAACCGTTCCCCTCGCTGGGCGCTGTGG
AACCCCAACCCCTGCAACCCTTACCTCTGTTCAGCGTGGGCATCGCCAAG
TTTGTGGCGGGCATAAACGCCTCGCTGGGCGCCGAAACCCCTTCCTTCGG
GGACGCGGAGGCCAGAGAGATGATCGTCCGCCTGGACTGGGAGAACAAGA
TCATGCTTGACGACTCCGACAGCGTCGTGCACATGGTATGAGGACTCGCC
GGAGCCCAAGGAT back to topCoding sequence (CDS) from alignment at S-ischiensis_contig88:100028..103340- >mRNA_S-ischiensis_contig88.20293.1 ID=mRNA_S-ischiensis_contig88.20293.1|Name=mRNA_S-ischiensis_contig88.20293.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=720bp|location=Sequence derived from alignment at S-ischiensis_contig88:100028..103340- (Schizocladia ischiensis KU_0333)
GGCAGAGGGGGCCGTGGCAGCGGCGGCGGCAGTGGGGCTGCGGTGGTCGA
TGTCATCGACCTCGTCTGCCGTGATGGCAGAGGGGGCCGTGGCAGCGGCG
GCGGCAGTGGGGCTGCGGTGGTCGATGTCATCGACCTCGTCTGCCGTGAT
GGGAGTGAGAGTTCGGCTCCGGCAGCGCCGCGGGTAGTGCCGCAAGGGCC
AGTCGTGAACCCCACGGGAGTGAGAGTTCGGCTCCGGCAGCGCCGCGGGT
AGTGCCGCAAGGGCCAGTCGTGAACCCCACCCGGCTGCTGGCTTTCACGG
CCCATGTCTACGACGTCTTCCGGAAGCTGGGCGATAATGACAGCCGGCTG
CTGGCTTTCACGGCCCATGTCTACGACGTCTTCCGGAAGCTGGGCGATAA
TGACAGCGTGGGCATCGCCAAGTTTGTGGCGGGCATAAACGCCTCGCTGG
GCGCCGAAACCCCTTCCTTCGGGGACGCGGAGGCCAGAGAGATGATCGTC
CGCCTGGACTGGGAGAACAAGATCATGCTTGACGACTCCGACAGCGTCGT
GCACATGGTATGACGTGGGCATCGCCAAGTTTGTGGCGGGCATAAACGCC
TCGCTGGGCGCCGAAACCCCTTCCTTCGGGGACGCGGAGGCCAGAGAGAT
GATCGTCCGCCTGGACTGGGAGAACAAGATCATGCTTGACGACTCCGACA
GCGTCGTGCACATGGTATGA back to top
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