mRNA_S-ischiensis_contig87.20233.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: D8LF54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF54_ECTSI) HSP 1 Score: 101 bits (251), Expect = 4.950e-22 Identity = 50/103 (48.54%), Postives = 63/103 (61.17%), Query Frame = 3
Query: 486 MGLEESLRRRWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFFRTFAIA 794
M E+ + RRW LC +G+ S EW LR Y E R YHT +H+A ML D DF + L++L++FFHDV+YDPKSGSNEEDS A FR F+ A
Sbjct: 1 MSREKLVMRRWVSLCHALGIDNAPSEEWGETLRDGYSEEGRHYHTFEHVADMLEQADRDF--PNLRHPRLVQLAIFFHDVVYDPKSGSNEEDSEALFRKFSEA 101
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: A0A7S3BQC1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BQC1_9EUKA) HSP 1 Score: 93.2 bits (230), Expect = 4.710e-20 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 3
Query: 504 LRRRWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGD-GIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFFRTFAIAA 797
L RWH+L G G +S WW + R+ E HR YHTL H+A + + LD +G + RR L+E ++FFHD+IYDP+S +NEEDSA FR +A A
Sbjct: 30 LEARWHQLA---GSGHISS-RWWREISERHSERHRHYHTLSHLAELFSFLDSPYGAEIAPSRRPLVEYAIFFHDIIYDPRSRTNEEDSAKLFRQYAAEA 124
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: A0A4Q2ZEP9_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2ZEP9_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 3.560e-18 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 507 RRRWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFFRT 782
+ R+ RLC + + +D S W L RY ESHR YH L HI AML +DE GD +EL+++FHDVIYDP++ NEE SAAFF T
Sbjct: 4 KARFARLCGRLAIVDDVSENVWTDLYSRYSESHRHYHNLHHIEAMLVKMDEVSAGDVA-----MELAIWFHDVIYDPRARDNEEQSAAFFVT 90
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: A0A7S0WGX3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WGX3_9CRYP) HSP 1 Score: 86.3 bits (212), Expect = 9.870e-18 Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 3
Query: 504 LRRRWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDE--DFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFFRTF 785
L RW +C +GV S +W+ L G Y R YHTL+H+ M A LD G + R DLL L+VFFHD +YDP +G+NEEDSA FR F
Sbjct: 3 LAARWMGVCGGLGVERRVSVDWYRRLWGLYCGRGRFYHTLEHLRCMFAFLDAVGKKHGATVLRPDLLALAVFFHDAVYDPTAGTNEEDSACLFRDF 98
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: A0A835ZF01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF01_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.410e-17 Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 3
Query: 483 LMGLEESLRRRWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFFRTFAIAAT 800
++G E R W +L +GV ++ +WW + Y E R YHT +HIA ML L + LL L++FFHDVIYDP SG+NEEDSAA + TFA A T
Sbjct: 1 MLGARERNRLAWQQLMSQLGVPQETGWQWWQTVDTHYSEGPRSYHTHEHIADMLQQLTAMQPPPC--KPALLTLAIFFHDVIYDPMSGTNEEDSAALYTTFAAAIT 104
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: UPI001425AC27 (uncharacterized protein LOC117106315 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AC27) HSP 1 Score: 88.6 bits (218), Expect = 2.160e-17 Identity = 45/99 (45.45%), Postives = 56/99 (56.57%), Query Frame = 3
Query: 495 EESLRRRWHRLCWTIGVGEDASCE-WWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFFRTFA 788
+ES+R +W +C+ V E CE WW +L Y E R YHTL HI M + + R DL+ SVFFHD+IYDPKS NEE+SA F FA
Sbjct: 7 QESVRNQWQDVCFKCSV-ESTLCERWWSVLEANYSEERRHYHTLHHIRKMNEAVSSV--ASNLKRPDLVYWSVFFHDIIYDPKSSKNEEESAKVFEEFA 102
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: UPI001EE5EEA2 (uncharacterized protein LOC124256753 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5EEA2) HSP 1 Score: 84.0 bits (206), Expect = 8.780e-16 Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 3
Query: 516 WHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFFRTFA 788
W LC I VG + + +WW + +Y E R YHTL HIA M + +G + L++FFHD++YDPKS SNE+DS FR FA
Sbjct: 10 WTELCHGIRVGAEEADKWWTTIVNKYTEIQRHYHTLDHIADMFVCYNN--WKQRLGNCSAVALAIFFHDIVYDPKSSSNEQDSIQMFRDFA 98
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: A0A4Q2Z266_9BACT (Phosphohydrolase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2Z266_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 2.050e-14 Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 3
Query: 513 RWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFF-RTFA 788
R+ +C GV +S + W L Y E HR YH L+HI +MLA +DE GD +EL+++FHDVIYDP++ NEE SAAFF RT A
Sbjct: 6 RFLDVCRQAGVDVTSSRDVWHSLHVLYSEPHRHYHNLRHIESMLARMDEVSPGD-----TTMELAIWFHDVIYDPRARDNEEQSAAFFVRTMA 93
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: A0A7S3HD56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD56_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.860e-14 Identity = 44/136 (32.35%), Postives = 70/136 (51.47%), Query Frame = 3
Query: 369 TVDFRRAARIPRRWCNRLIFFFRTFSISPSPDCELVRLLMGLEESLRRRWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFF 776
+V R + + R +C F++ S S + C + ++ ++ + W LC + + W +L RYGE R YH + HI A+L D I ++ ++L+V+FHDV+YDPKS +NEEDSA F
Sbjct: 22 SVSPRSPSIVRRNFCTS----FKSMSSSLTASCSSDKPVISIDTV--KHWKELCNKLHFSASVAENVWQVLETRYGEVQRHYHNMHHIRALLR--HSATYADLIADKEAVDLAVYFHDVVYDPKSKTNEEDSADLF 149
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Match: A0A183ILX3_9BILA (Uncharacterized protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183ILX3_9BILA) HSP 1 Score: 77.8 bits (190), Expect = 6.060e-14 Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query: 486 MGLEESLRRRWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAAMLAGLDEDFGGDGIGRRDLLELSVFFHDVIYDPKSGSNEEDSAAFFRTF 785
M E +LR RW L T VGE+ +WW +R Y E+HR YHTL+H++ M D D + R L ++FFHD++ + S SN +DS+A F F
Sbjct: 1 MEYEAALRERWDDL--TSCVGEEVRNKWWAKIRDAYSETHRHYHTLEHLSLMFKFYD--MYKDQLNNRCSLMYAIFFHDIVCNLNSQSNPQDSSAVFAEF 96 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig87.20233.1 >prot_S-ischiensis_contig87.20233.1 ID=prot_S-ischiensis_contig87.20233.1|Name=mRNA_S-ischiensis_contig87.20233.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=116bp MGLEESLRRRWHRLCWTIGVGEDASCEWWLLLRGRYGESHRRYHTLQHIAback to top mRNA from alignment at S-ischiensis_contig87:126705..129062+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig87.20233.1 ID=mRNA_S-ischiensis_contig87.20233.1|Name=mRNA_S-ischiensis_contig87.20233.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2358bp|location=Sequence derived from alignment at S-ischiensis_contig87:126705..129062+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig87:126705..129062+ >mRNA_S-ischiensis_contig87.20233.1 ID=mRNA_S-ischiensis_contig87.20233.1|Name=mRNA_S-ischiensis_contig87.20233.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=696bp|location=Sequence derived from alignment at S-ischiensis_contig87:126705..129062+ (Schizocladia ischiensis KU_0333)back to top |