mRNA_S-ischiensis_contig87.20221.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig87.20221.1
Unique NamemRNA_S-ischiensis_contig87.20221.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: A0A7L4XQX3_SACJA (Carbohydrate sulfotranserase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A7L4XQX3_SACJA)

HSP 1 Score: 120 bits (302), Expect = 2.640e-27
Identity = 98/309 (31.72%), Postives = 136/309 (44.01%), Query Frame = 2
Query:   11 RMEAAGNGREREKKR---LLVVALGRSGSTMTGELFRGNPRAMYFYEPCRRAVFVPAHGVVDPKPDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSP--NATYVGYGKQRWRWKGKEVVLDKARRALTRRCQSVNLVAAKVVRLD-GLLQSQLDDPQLYVMHLVRDPRAVVRSQTELWSGAGGAXXXXXDEEAEKLQRQKAREAAYKKGTIVCQRMRRHLDFMKGLDPARYHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNTVLPGC 919
            R+ A G   E E  R   +L++A+GRSGST+ G+LF+ N   +YFYEPCR+       G+          C   ++R+  C F+ ED              S ++A   N V             + GSP   +     G++ +          +A   L   C +   V  K +RL  GL     D   L V+HLVRDPR VVRSQ E +  + GA     D ++  +        A+  G  +C   R  LD  K L   RY R+RYED   S   A   IY W GLG VP  +  W++ NT +P C
Sbjct:   26 RVRAKGGSAEAEAARPIGVLIMAVGRSGSTLVGQLFQQNKDVLYFYEPCRKLSGTDIDGLE---------CLAFLQRLTQCTFSAED--------------SAWIADDANSV-------------KNGSPALKSLLAASGRKEF---------AEAHERLVDTCINSKAVVVKSIRLGVGLGGRDYDLGGLKVLHLVRDPRGVVRSQREHFGISWGASN---DADSATI--------AHAGGASICGSYRNQLDSSKKLGDDRYLRVRYEDIATSPELAVAFIYYWCGLGTVPASVSEWVEVNTNMPTC 278          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: A0A6H5JR69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR69_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 7.390e-23
Identity = 97/317 (30.60%), Postives = 123/317 (38.80%), Query Frame = 2
Query:   56 LLVVALGRSGSTMTGELFRGNPRAM----------------------------YFYEPCRRAVFVPAHGVVDPKPDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSPNATYVGYGKQRWRWKGKEVVLDKARRALTRRCQSVNLVAAKVVRL-DGLLQSQLDDPQLYVMHLVRDPRAVVRSQTELWSGAGGAXXXXXDEEAEKLQRQKAREAAYKKGTIVCQRMRRHLDFMKGLDPARYHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNTVLPGC 919
            +L++A GRSGSTM GELFR N + +                            YFYEPCR+       G+        P C  L+ R+L C FT +D   + ADR A   SS  V                     E    AT  G  +   R    +  L  A   +   C+S   V  K +RL DGL     D   L+V+ LVRDPR VV SQ  LW+          D +   +    AR  A   G +                  +Y RLRYED T      A  +Y   GLGEVP  +  WI  NT +P C
Sbjct:   71 ILILAQGRSGSTMLGELFRHNEKCLPVCTHTQTSSQPAAPLTCSHSFLHKNHLYFYEPCRQRGHGVLGGLHQTSSVGGPECFALVRRLLRCEFTLQDTDGISADRAAAEASSPAV---------------------EEPTRATRDGGTEVAKR----QEALHVAHETIMEACKSSRAVVVKSIRLYDGLNGQDYDTSGLHVLLLVRDPRGVVNSQMGLWNNPSKIGGNGGDVDPAHV----ARNTAQTLGAV------------------KYLRLRYEDFTTLPKVVAELVYCRFGLGEVPATVMGWINYNTRMPAC 340          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: D8LIC4_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC4_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 4.390e-19
Identity = 87/283 (30.74%), Postives = 123/283 (43.46%), Query Frame = 2
Query:   92 MTGELFRGNPRAMYFYEPCRRAVFVPAHGVV-DPKPDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSPNATYVGYGKQRWRWKGKEVVLDKARRALTRRCQSVNLVAAKVVRL-DGLLQS-QLDDPQLYVMHLVRDPRAVVRSQTELWSGAGGAXXXXXDEEAEKLQRQKAREAAYKK--GTIVCQRMRRHLDFMKG--LDPARYHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNTVLPGC 919
            M GELFR N   +Y YEPCR +      GV+ + +      C  L  R++ C F   D   +G D  A   SS  VA     V       G               GY  +         +L +A +AL   C+    VA K +RL DG+  + + D   + ++ LVRDPRAVVRSQ   W     +       E + +   +AR+   ++  G  +C   R  LD  K   LD  +Y +LRYED        A  +Y WAGLG +P  +  WI ++T +  C
Sbjct:    1 MIGELFRENEDVVYVYEPCRAS----GKGVLGNYQMLLRTECFALARRLVRCEFDVNDSDRLGTDGFAAGFSSPVVADVHKSVKAGKGSGG---------------GYRAE---------LLHRAHQALMDACKESRAVAIKTIRLLDGVGDAAKYDTSGVNILQLVRDPRAVVRSQLRHWGLDRFSEALPNVRELKGMTDWRARQTESRRAVGQYLCSNYRMQLDSPKQQHLDDGKYLQLRYEDFATLPTVVAELVYCWAGLGPLPPTVATWIDEHTKMSNC 255          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: A0A6G6CDI6_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDI6_SACJA)

HSP 1 Score: 92.0 bits (227), Expect = 2.240e-17
Identity = 75/240 (31.25%), Postives = 104/240 (43.33%), Query Frame = 2
Query:  212 CAELMERVLNCNFTDEDIRTMGADRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSPNATYVG--YGKQRWRWKGKEVVLDKARRALTRRCQSVNLVAAKVVRL-DGLLQSQLDDPQLYVMHLVRDPRAVVRSQ-TELWSGAGGAXXXXXDEEAEKLQRQKAREAAYKKGTIVCQRMRRHLDFMKGLDPARYHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNTVLPGC 919
            C  L++R+  C F+  D   + +D+ A       V+Y                    GSP    +G  +G +++          +A   L   C     VA K +RL +GL     D   L V+HLVRDPRAVVRSQ   L +  GG      D           R+ +   GT VC   R  LD  K L+ +RY  +RYED   +   A   +Y WAGLG +P  ++ WI  NT +P C
Sbjct:    7 CLALLQRLTRCAFSLTDSAGIASDKNA-------VSY--------------------GSPELNILGAAHGAKQF---------FQAHEQLIETCNKRRAVAVKSIRLTEGLGGKDYDVSGLQVLHLVRDPRAVVRSQQAHLMTSWGGRGRVKADN----------RKTSRAGGTSVCGTYRVQLDTSKKLEESRYLLMRYEDIATTPEIAVELMYYWAGLGPLPANVKEWIDANTKMPAC 200          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: UPI00193A1B9C (carbohydrate sulfotransferase 1-like isoform X1 n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A1B9C)

HSP 1 Score: 79.3 bits (194), Expect = 9.230e-13
Identity = 79/307 (25.73%), Postives = 136/307 (44.30%), Query Frame = 2
Query:   44 EKKRLLVVALG--RSGSTMTGELFRGNPRAMYFYEPCRRAVFVP-AHGVVDPKPDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSPNATYVGYGKQRWRWKGKEVVLDKARRALTRRCQSVNLVAAKVVRLDGL--LQSQLDD-----PQLYVMHLVRDPRAVVRSQTELWSGAGGAXXXXXDEEAEKLQRQKAREAAYKKGTIVCQRMRRHLDFMKGL-DPA------RYHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNTVLP 913
            +K + +V+  G  RSGST  GE+F  N  A Y YEP     + P  H + + +        E +++++NC F+D         R  T  S        N    A     +    ++   ++T++    Q+  +  +  V+          C    +VA KV+R+  L  ++    D       +YV+HL+RDPRA++ S+ +L      A              QKA E        +C ++ R+L+++ G  DP       +Y R+RYEDA++  +  A  IY + GL E+P  +  W++ +T+ P
Sbjct:   55 QKPQKIVILYGNQRSGSTFMGEMFNKNTNAFYLYEPL--FPYTPHCHFLNEER-------LETLKKMMNCQFSDS-ASAFKLARNFTKASDTVSGCVINNACFASRSDALSIRYKQFCKSSTFLSIA-QKCEFPLRADVISTI-------CSQTEVVAFKVLRICSLKDIEEIYKDFKNRGKDVYVIHLLRDPRAIISSKLKLELKESNAL-------------QKAGE--------LCSKIHRNLEYINGTTDPPLLIRDEKYLRIRYEDASMEPISTASKIYGFLGL-ELPAEVEGWLKMSTIQP 321          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: A0A7S2SDK7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDK7_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.290e-11
Identity = 83/303 (27.39%), Postives = 120/303 (39.60%), Query Frame = 2
Query:   53 RLLVVALGRSGSTMTGELFRGNPRAMYFYEPCRRAVFVPAHGVVDPKPDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSPNATYVGYGKQRWRWKG-KEVVLDKARRALTRRCQSVNLVAAKVVRLDGLLQSQLDDPQLYVMHLVRDPRAVVRSQTELWSGAGG------AXXXXXDEEAEKLQRQKAREAAYKKGTIVCQRM------------RRHLDFMKGLDPARYHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNT 904
            R+LV    RSGST  GE    +P A Y YEPCR   +       +    +   CA L+ R+L+C+F  EDI T+  D +A      F +    Q     ++T      + G        Y     RW+  K+V L    R +     + NLV     R        L    + ++HLVRDPRAV+ S+  L +   G            D+    L    AR++      +   ++            RR L  ++ + P  Y RLRYED           +Y W GLG +    R WI  +T
Sbjct:   45 RVLVWTHPRSGSTFLGEALSMHPDAFYLYEPCRAFEY-------EFSDVSSEACARLVTRLLSCSFLQEDINTLYGDVKAI-----FKSRVLRQPEFLGNRTSAEWKGEGGGKEL----YAPPAGRWEALKQVCLSSKARVVKEIRLAQNLVGKDGTRSIAAAFQILVKSGVQIVHLVRDPRAVLSSKMRLEAFCKGHGDRKQCIQQTCDDHRVVLFT--ARQSLPDPPGVFRIKLHMLVPATPAPPGRRRLARLQRVRP--YLRLRYEDLASQPTAVLEALYNWLGLGALQAQQREWIHAHT 327          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: D7FWT3_ECTSI (Sulfotransferase, C-terminal Sulfotransferase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT3_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 4.550e-11
Identity = 39/87 (44.83%), Postives = 50/87 (57.47%), Query Frame = 2
Query:   56 LLVVALGRSGSTMTGELFRGNPRAMYFYEPCRRAVFVPAHGVVDPKPDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRFV 316
            +L++A GRSGSTM GELFR N   +YFYEPCR+       G+ +      P C  L+ R+L C FT +D   + ADR A   SS  V
Sbjct:   71 ILILAQGRSGSTMLGELFRHNEDLLYFYEPCRQRGQGVLGGLHETSSVGGPECFALIRRLLRCEFTLQDTDGISADRAAAEASSPVV 157          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: A0A7M7REN6_STRPU (Sulfotransfer_1 domain-containing protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7REN6_STRPU)

HSP 1 Score: 73.6 bits (179), Expect = 1.030e-10
Identity = 76/293 (25.94%), Postives = 125/293 (42.66%), Query Frame = 2
Query:   56 LLVVALGRSGSTMTGELFRGNPRAMYFYEPCRRAVFVPAHGVVDPKPDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSPNATYVGYGKQRWRWKGKEVVLDKARRALTRRCQSVNLVAAKVVRL---DGLLQSQLD-DPQLYVMHLVRDPRAVVRSQTELWSGAGGAXXXXXDEEAEK---LQRQKAREAAYKKGTIVCQRMRRHLDFMKG---LDPARYHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNT 904
            LL+V   RSGS+  G++F  NP   + +EP +         +++ K    P  + L+  +L C F          DR   +       Y    +++   K    P         T V Y K R     +   L+    A+T  C        K++RL   + L     D D  L ++HL+RDPR  + S+++             D +  K   L +  + +AAY     +C+RM+ + +F      L  +RY R+RYED           +Y++AG+G+VP+ +  WIQ+NT
Sbjct:  217 LLIVTQRRSGSSFLGQIFNQNPWVFFHFEPLK---------LLEIKKKVYPNASSLLANLLTCRF----------DRTPYLTDF----YNHETLHRMSSKVLCSPPLC-----VTNVDYNKMRSSTVKQCGPLEAE--AMTNLCNVYPHKVVKLIRLYSVESLTPLLKDKDINLKIIHLLRDPRGTLSSRSK------------EDPKRTKPLSLGKSLSHDAAY-----ICRRMKHNFNFAHKNPELLRSRYLRVRYEDIATDPEGWTAALYKFAGMGDVPVNVHNWIQQNT 462          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: A0A7E6FFN9_OCTVU (carbohydrate sulfotransferase 1-like isoform X1 n=2 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6FFN9_OCTVU)

HSP 1 Score: 72.4 bits (176), Expect = 1.280e-10
Identity = 58/203 (28.57%), Postives = 94/203 (46.31%), Query Frame = 2
Query:   53 RLLVVALGRSGSTMTGELFRGNPRAMYFYEPCRRAVFV-----PAHGVVDPK------PDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSPNATYVGYGKQRWRWKGKEVVLDKARRALTRRCQSVNLVAAKVVRLDGLLQSQL--DDPQLYVMHLVRDPRAVVRSQTEL 622
            +++++A  RSGS++TG++      A+Y++EP R+  F      P   + D K         + G  ++++  LNC F +  + T+  DR    VS   +   FNQ    + K   VP   +  P    V                          C S N+  AKV+RLD  L  +L   D  LYV+HL+RDPRA++RS++++
Sbjct:   16 KVIILAYMRSGSSVTGKILEQARNAIYYFEPLRKLSFYSYANQPLTSIDDKKRYFATNKSVEKGKIQILKAHLNCKFRNTFVETL-LDRA---VSGCKICKKFNQ---CLKKNNSVPMVNKCLPQLQNV--------------------------CNSANVRIAKVIRLDMNLVPELLQSDSNLYVVHLIRDPRAILRSRSKV 185          
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Match: UPI0000521A98 (carbohydrate sulfotransferase 1 isoform X1 n=3 Tax=Ciona intestinalis TaxID=7719 RepID=UPI0000521A98)

HSP 1 Score: 70.9 bits (172), Expect = 6.390e-10
Identity = 81/308 (26.30%), Postives = 129/308 (41.88%), Query Frame = 2
Query:   56 LLVVALGRSGSTMTGELFRGNPRAMYFYEPCRRAVFVPAHGVVDPKPDNDPGCAELMERVLNCNFTDEDIRTMGA-------DRRATIVSSRFVAYTFNQVYQAMDKTGIVPDPQEGSPNATYVGYGKQRWRWKGKEVVLDKARRALTRRCQSVNLVAAKVVRLDGL--LQSQLDDP--QLYVMHLVRDPRAVVRSQTELWSGAGGAXXXXXDEEAEKLQRQKAREAAYKKGTI--VCQRMRRHLDFMK-------GLDPAR-----YHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNT 904
            +++    RSGS+  GELF  + +  Y +EP        A G    + +N       +  +  CNFT+       A       D+ +  V   F  + F  ++ + D T +   P                  WKG +V  D   + L++ CQ      +KV+    L  L+  L+D   +L V+HLVRDPRAV+ S+ +++S A                          KG +  +C   RR+L F +       G+ P+R     Y RLR+ED +   L+ AR +Y + GL    + I +WI+ NT
Sbjct:  101 VIIFTSMRSGSSFLGELFNQHSQVFYMFEPLH------AFGSYKEQRENR---FRALHDISRCNFTNLPNMYKQAVEGGYAPDQSSRCVEDNF-CFKFKSLFLSRD-TDLCQSP------------------WKGCKVPFDP--QILSQVCQRSLFPVSKVIAEPFLESLEPILEDSRVELRVIHLVRDPRAVMSSRKDVFSDAKNTFAI--------------------KGNVNYLCNSQRRNLRFAECMNSLCDGVKPSRLWKGRYKRLRFEDVSARPLEVAREVYNFVGLNFNSI-IEKWIKLNT 356          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L4XQX3_SACJA2.640e-2731.72Carbohydrate sulfotranserase n=2 Tax=Saccharina ja... [more]
A0A6H5JR69_9PHAE7.390e-2330.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIC4_ECTSI4.390e-1930.74Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6G6CDI6_SACJA2.240e-1731.25Sulfotransferase n=1 Tax=Saccharina japonica TaxID... [more]
UPI00193A1B9C9.230e-1325.73carbohydrate sulfotransferase 1-like isoform X1 n=... [more]
A0A7S2SDK7_9STRA1.290e-1127.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D7FWT3_ECTSI4.550e-1144.83Sulfotransferase, C-terminal Sulfotransferase, N-t... [more]
A0A7M7REN6_STRPU1.030e-1025.94Sulfotransfer_1 domain-containing protein n=2 Tax=... [more]
A0A7E6FFN9_OCTVU1.280e-1028.57carbohydrate sulfotransferase 1-like isoform X1 n=... [more]
UPI0000521A986.390e-1026.30carbohydrate sulfotransferase 1 isoform X1 n=3 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:20156..28579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score79.0
Seed ortholog evalue4.9e-12
Seed eggNOG ortholog10224.XP_002731127.1
Preferred nameCHST3
KEGG rclassRC00007,RC00134
KEGG koko:K01020,ko:K01022
KEGG ReactionR02181,R07288
KEGG Pathwayko00532,ko00533,map00532,map00533
GOsGO:0000139,GO:0001517,GO:0001776,GO:0002260,GO:0002376,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006082,GO:0006790,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0008146,GO:0008150,GO:0008152,GO:0008459,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009611,GO:0009987,GO:0012505,GO:0014012,GO:0016020,GO:0016021,GO:0016043,GO:0016740,GO:0016782,GO:0019538,GO:0022008,GO:0030030,GO:0030154,GO:0030166,GO:0030182,GO:0030203,GO:0030204,GO:0030206,GO:0031090,GO:0031099,GO:0031102,GO:0031103,GO:0031175,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0032879,GO:0033554,GO:0034481,GO:0034645,GO:0042592,GO:0043029,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048678,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050650,GO:0050654,GO:0050698,GO:0050789,GO:0050794,GO:0050896,GO:0051270,GO:0051272,GO:0051716,GO:0061564,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0098588,GO:0098791,GO:0120036,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.chondroitin 6-sulfotransferase activity
EggNOG OGs299AF@1,2QWEX@2759,39NJA@33154,3BKJZ@33208,3CZTA@33213
EC2.8.2.17,2.8.2.21
COG Functional cat.O
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons9
Model size1026
Cds size1011
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20221.1prot_S-ischiensis_contig87.20221.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig87 20156..28566 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817351.1363819-CDS-S-ischiensis_contig87:20155..202941622817351.1363819-CDS-S-ischiensis_contig87:20155..20294Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 20156..20294 -
1695741048.2998073-CDS-S-ischiensis_contig87:20155..202941695741048.2998073-CDS-S-ischiensis_contig87:20155..20294Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 20156..20294 -
1622817351.1471221-CDS-S-ischiensis_contig87:20908..210131622817351.1471221-CDS-S-ischiensis_contig87:20908..21013Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 20909..21013 -
1695741048.3201394-CDS-S-ischiensis_contig87:20908..210131695741048.3201394-CDS-S-ischiensis_contig87:20908..21013Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 20909..21013 -
1622817351.1573043-CDS-S-ischiensis_contig87:22621..226781622817351.1573043-CDS-S-ischiensis_contig87:22621..22678Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 22622..22678 -
1695741048.3346853-CDS-S-ischiensis_contig87:22621..226781695741048.3346853-CDS-S-ischiensis_contig87:22621..22678Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 22622..22678 -
1622817351.1715596-CDS-S-ischiensis_contig87:23951..240611622817351.1715596-CDS-S-ischiensis_contig87:23951..24061Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 23952..24061 -
1695741048.3514218-CDS-S-ischiensis_contig87:23951..240611695741048.3514218-CDS-S-ischiensis_contig87:23951..24061Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 23952..24061 -
1622817351.183781-CDS-S-ischiensis_contig87:25171..253011622817351.183781-CDS-S-ischiensis_contig87:25171..25301Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 25172..25301 -
1695741048.3651516-CDS-S-ischiensis_contig87:25171..253011695741048.3651516-CDS-S-ischiensis_contig87:25171..25301Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 25172..25301 -
1622817351.1963758-CDS-S-ischiensis_contig87:25881..260541622817351.1963758-CDS-S-ischiensis_contig87:25881..26054Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 25882..26054 -
1695741048.3746717-CDS-S-ischiensis_contig87:25881..260541695741048.3746717-CDS-S-ischiensis_contig87:25881..26054Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 25882..26054 -
1622817351.2096033-CDS-S-ischiensis_contig87:26934..270511622817351.2096033-CDS-S-ischiensis_contig87:26934..27051Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 26935..27051 -
1695741048.384398-CDS-S-ischiensis_contig87:26934..270511695741048.384398-CDS-S-ischiensis_contig87:26934..27051Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 26935..27051 -
1622817351.220962-CDS-S-ischiensis_contig87:28092..281871622817351.220962-CDS-S-ischiensis_contig87:28092..28187Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 28093..28187 -
1695741048.396631-CDS-S-ischiensis_contig87:28092..281871695741048.396631-CDS-S-ischiensis_contig87:28092..28187Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 28093..28187 -
1622817351.2324734-CDS-S-ischiensis_contig87:28481..285661622817351.2324734-CDS-S-ischiensis_contig87:28481..28566Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 28482..28566 -
1695741048.4058537-CDS-S-ischiensis_contig87:28481..285661695741048.4058537-CDS-S-ischiensis_contig87:28481..28566Schizocladia ischiensis KU_0333CDSS-ischiensis_contig87 28482..28566 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817351.2469237-UTR-S-ischiensis_contig87:28566..285791622817351.2469237-UTR-S-ischiensis_contig87:28566..28579Schizocladia ischiensis KU_0333UTRS-ischiensis_contig87 28567..28579 -
1695741048.4148705-UTR-S-ischiensis_contig87:28566..285791695741048.4148705-UTR-S-ischiensis_contig87:28566..28579Schizocladia ischiensis KU_0333UTRS-ischiensis_contig87 28567..28579 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig87.20221.1

>prot_S-ischiensis_contig87.20221.1 ID=prot_S-ischiensis_contig87.20221.1|Name=mRNA_S-ischiensis_contig87.20221.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=337bp
MEAAGNGREREKKRLLVVALGRSGSTMTGELFRGNPRAMYFYEPCRRAVF
VPAHGVVDPKPDNDPGCAELMERVLNCNFTDEDIRTMGADRRATIVSSRF
VAYTFNQVYQAMDKTGIVPDPQEGSPNATYVGYGKQRWRWKGKEVVLDKA
RRALTRRCQSVNLVAAKVVRLDGLLQSQLDDPQLYVMHLVRDPRAVVRSQ
TELWSGAGGAGGGAGDEEAEKLQRQKAREAAYKKGTIVCQRMRRHLDFMK
GLDPARYHRLRYEDATVSVLDAARGIYRWAGLGEVPLPIRRWIQKNTVLP
GCTPTKPGPKKSNPGRATGAGARRQLLVTAPGGGGGY
back to top

mRNA from alignment at S-ischiensis_contig87:20156..28579-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig87.20221.1 ID=mRNA_S-ischiensis_contig87.20221.1|Name=mRNA_S-ischiensis_contig87.20221.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8424bp|location=Sequence derived from alignment at S-ischiensis_contig87:20156..28579- (Schizocladia ischiensis KU_0333)
GCCAGACCGGAGGATGGAAGCGGCTGGAAATGGGCGGGAGCGGGAGAAGA AGCGATTGCTGGTGGTGGCGCTCGGGCGCTCAGGATCGACCATGACAGGT GCCCGCCGCTCCCCCGCGGTCGTCTGTGTGTGTGTATATGTGCGTGTGTG CTGGAGACTGTGTGTGAGTACAGTGTGTTTTTATTGCGCCCTGCGAGCGA AAGAAGGGCTTTGTGGTGAGGTCCCCAGTTTTGGGCCGGGGCCCGGACAG AGCTCGCATGCCTTCGAAAGAGTCTATGAAAGGCGAGAAGAGAGTAGTCT GTAAAAGGGAGGCACAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGT AACATGCTCTTCTCGTCCATGTCTCGCCGTGCATTCCACCAGGGGAGCTG TTCCGGGGCAACCCAAGGGCCATGTATTTCTACGAGCCGTGCCGCCGCGC TGTTTTCGTGCCGGCCCATGGAGTGGTGGACCCCAAGGTGCGTGTGCTTG ACATATGTGTGCTCACGTTGTGCTTGCCGTTCAAAGTATCAAGTAGTTAG GAGAATAAGCTTCAAAGAACACAAGTAGTTAAGGAGATGCAATTTCAAAG GTCCAAGTAGTTCCCGAGATCGCCAATGGAAGTATATACATGAGATGCAA TTTCAAAGGTCCAAGTAGTTCCGGAGATCGCCACTGGAAGTATATACAGT ACATATATGTGTGTATTCACGCTGTTCTTGCCCTAGTCCAGAGACCATTG ACCACGCGGCGTTGACGACGGAGCAATCGCCCTCCCGCCCCTGGCAAGCA AGGGTGGCGGGGGGGGCGGACCACCCCCGCTCATGGCGGTATGATATGTG CTTTGAAATACGAGTAAACAAACATAGGCTTTCCCAAGTACGTCCCGCAA CGCGGCACACGAGATACCCCCCCTGCATTGCCCCTGTGTGTTTGCTTCTT GGCGATTCTGCGATGTGATGTGATGTAGCATGTGCGCGAGTACTCGGGCA TACAAATATATACTCCGAAGCACTCGCACATCTTGCAAGTATACGAGTGC GTAGACGTATGCACTCGTGCTCGAGCACATTGCCTCTGTACGAGAGTTTT CGTAAGTAGTATTTCGAGGACCCAGACAGTGCAACGCTGATATTCCTCCG GGCACGAGTCCTGCCGCCCTGACACTTGCCTCGCCCTCCCTCCCTCCCTC CCTCCCTCCCTGCCTGCCTCCCTTGTGCCCTCCCTCGCTCCTTCTTCCCC CCCCCTCCCCTCGCTCCCTCCCTCACTGCCTCCCTGCCTCCCTCCCTCCC TCCCTCCCTCCGTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC CGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCATCCCTCCCTCCGT GCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCGTCCCTCC CTCCCTCCTTCCGTCCCTCCCTCCCTCCCTCGCTCCTTCCTCCCCCACCC TCGCCTTGTCCCTGTCTCACTCCTTTAGCCTGACAATGACCCGGGCTGTG CGGAGCTGATGGAAAGGGTGCTAAACTGCAACTTCACGGATGAAGACATC CGCACCATGGGGGCTGACCGACGGGCAACAATAGTGTCCTCACGGGTAAG ATGTGATGTGATGTGATGTTCACTCTAATGTGCTGTAGTTTGACATCACA TCACATCACGTCGCATCAAAAGAAAGTACTCAACTTGCAACTTCACGGAC GAAGATATCCGCACCGTGGGGGCCGACCGACGGGCCACAATGGTGTTCTC ACGGGTACGTACAATAGCATGTGCTATTGTACCGCTGTGATGCCATGTGG CGTGATAGGGATATGATGTGATGTGATGTGATGTGATGTGATGTGCCACG GCTGTGATGCAGTACTCTATGATGTGATGTGATGTGCCACAGCTGTGACG CAGTACGGTGTGATGTGATGTGGTGTGGCATGATGTGATGTGATGTGCGA TGTGGCGTGCTGCGACATGGTGTGATGTGCCAGGATGTGATACGATTGAT GTGGTGTGTTGTGACATTTCCCCAACTCCTTATCCAAGGTACATACTCTT CTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC CTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCTCCT CCTCCTCCTCCTGCTCCTGCTCCTCCTCCTTTCCCTTCCCCTCCTCCTCC TCCTCCGCCTCCTCCTCCTCCTCCTCCGCCTCCTCCTCCTCCTCCTCTTC CTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTGTTCCCCTCCTGCTC CTTCCTCTCATGTAACCGTCCCGGCATAGTAGGGACGCGAGGGTCACTGG CCCAAATGCCATGTCTACGCACAGTGCGCGGAGGAGTTAAGACGATGCAG GTGCAGCATGACTATGCATTAACTCACACCTCCTTCCTCCTCCCCCCGCT TCATCCCATCTGCTTGCCTCCATAGTTTGTGGCGTACACATTTAACCAAG TGTACCAGGCCATGGACAAAACGGGGATAGTCCCCGACCCGCAGGAAGGC TCGCCCAACGCCACCTACGTGGGGTACGGCAAGCAGAGGTGGAGGTGGAA GGGCAAGGAGGTCGTGTTGGACAAGGCAAGGAGGGCGCTCACCCGCAGGT GATGTGGTGTGATGTGATGTGATGTGATGCGATGTGATGTGATATGATGC AATTTGATGTGATGTGATGGTGTGAAATTAGAGCGCACATCGCATCCCCC GCCGATGTTGTGGTTGGACGTGTGTATATGGTTGGGACGCGAGACCCCAC GGCTAAATAGCTACTCCTGTCGGGGGGCAAACCCGAAGTTTTGACCTAAC TATATAGTGTAGTTAGTAGTCCTCAAATGGTTTGACTATACCCATGGTGT AGTTGAGAGTCAATGGCTCAATAGCTACTCCTGTCGCAGCGCAGACCGAA GTTTACCGTTACCGGTAACCTGCTACTTTCAGCCGTTACCGGCTACCGGT TTCAACCGACCGGTCACAAGACCCGCTAACAGTTAAACTGGTAGGCCGTG CCAGTTCACAACCCTATGGGACGCGGATTCGGCCAGTATTAACTATTCAG CGAGAAATGCCACGGTACGTGTCGTGATGTGATGTGATGTGATGCGTACT CTAGTGCACTGTAGTTTGGCATCACATCACATCACACCACATCACACCAC ATCGCATCAAATCTCTCTTCCCGGACAGGTGCCAGTCAGTGAATCTGGTG GCGGCCAAGGTGGTCCGGCTGGACGGTCTGCTGCAGTCACAGCTGGACGA CCCACAGCTGTACGTCATGCACCTCGTCAGGGACCCCAGGGCAGTCGTCC GCTCGCAGGTGGGCAGGGCTGGCACTGCCGTGTACATAAAAACGGCACTA CTACATAACTGCGAGTACTCCTGTCAGAGGGCAAGCCAGAAGTTTTGACG TAATCACATACTTCGTAGTGTAGCTAGTAGTCCAAATGGTTTGACTACTG TACACTGCGAAGTACCTTGTCAGGGACCCCAGGGCAGCCGTCCGCTCGCA GGTGGGCAGGGCTGGCACCGGCATGTCCACGAAGTCGGCACTTGCAGGTA TACTTCGAAGCACTTGTGTGCGGCAGCACTTGGCGGCAATCCGTGAGCAT TCGGGATGTGCAGTACTCTTGCGTTTGTGGGGATGTATACCAATTGTGGG GATGTATACCAATGGCGCCAAGGCTTGGGGATGGACACCTATTCAGTCAG GCACAATTCGACAAGTAGTGCTGCTGAGTTTGCCGGAAGCTCCGTCATCG GGCCCCGAGTGGTTTCCTTTCTTCAGCTGTCCAGCCGGCATGTCCGTTGT CCCTGTGACAGAGCCGTGGAGGGTATTTGTCTGTAGCATGCTGTCATTGA TGCTGAGTGCGTTTAACGAGTAGTTTGCTATCCAGGGCATCTGTGCACCC CTGCAGACAGAGCCGTGGAGTATACGTCTATATCACCTTGTCTTGATGCT CAGTGCCTTTGGTTGTGCTCTCCTGCATGTGTGTGTCTGTCGCCCTGCAG ACAGAGCTGTGGAGTGCTCGTATACGTCTACAGTACTTGGAGTATATCAC CTTGTCTTGATGCTCGGTGCCTTTGCTAGTAGTTGTGCTTTCCTGCATGT GTGTCTGTCCACCCCTGCAGACAGAGCTGTGGAGTACTCGTATTTGTCTA CTTGGAGTATATCACCTTGTCTTGATGCTCGGTGCCTTTACTAGTGGTTG TGGTCTCCTGCATGTGTGTCTGTCCGCCCCTGTGGAGTATACATCTAAAT CACCTTGTCTTGATGCGGTGACTTTAGTTGTGCTCTCCTGCATGTGTGTG TCTGTTCACCCTGCAGACAGAGCTGTGGAGTACTCGTATACGTCTAAATC ACCCTGTCTTGATGCTCGGTTCCTTTAGTTGTGCTCTCCTGCATGTGTGT GTCTGTCCACCCCTGCAGACGGAGCTGTGGAGCGGCGCAGGCGGGGCCGG GGGGGGAGCGGGGGACGAGGAGGCCGAGAAATTGCAGCGGCAGAAGGCCC GCGAAGCCGCATACAAAAAGGGCACCATGTGAGTTAATTACGTCGAAGCA ATGACCAGACCAGTTTGCGGGCGGTTGCTGTACCCGTGTCGGGCAGGGAG CCACTCCGTGCTGTGCATGCCACCGGCCGATGTGATGTGATGTGCTGTGG TGTGATGCTATGTGACGTGATGTGATGTGATGTGATGTGATGTGACGTGC TGTGGTGTGATGTGATGTGATGTGATGTGAGGCCGAACTACAGTACATAA GAGTATGCATCTCTTCACGTCATGTGTGTGTCCCAGTGTTGGACAGGGAG CCACCTAGTCCGGTGCATGCCACCGGCCGATGGTGTGTGCCGTTATGCTC TGTTGTGTCAAACTGCAGGCACATTGCGGTGGTGTGGTGTGATGTGATAT GATGTCGAACGGCAGTGCGCTAGAGTACACATCACATCACATCATGCATT AGAGTACACATCACATGATGTGTGTGTACACGTGTCGGACACGGCGCCAC CTCATCCGGTGCGTGCCACCGGCCGATTCTGATGTGATACGTTGTGATGT GATGTGATGTGATGTGTGCTGTTATGCTATGTTGTGCCAGACTGTAGTAC TTGGAAGTACATTGGAGTGATGTGATGTGGTCCCACACGGCGTGGCACAA GAAAGACCCCTGTCTCTTCCTCGTGCCCCGTGGTTGGTTGTTTGCGCTAC TGGAATGTGACGTGATGTGCACTCTAGTGTGATGTGATGTCAATCTACAG CGCATTGGAGTGCATATCATGTCACACCACACCATTTCACCTCACACGCC GCAGGGTCCCCCCTGCGGAATGCGTGGTCAATGGCCATATGGCTACGGCA GGCAACTCAGGAGTACACCCCCAATTCCCCCCTCTCTCTCACGCACACGG TAGCGGTTGAATGACAATCGACCACCTGCGTGTGCCCGCCCGCCCGCCCG CTCGGCATTGATGGTATATCGATCAGTAGGTAGTTATCGGGCTCGACAGA TTTTGTAGGTGGCGTTACTACCTCCGAAGTACTTGGCCTGCACCTCGCCC TGTGTCCTGATGATGCTAACTGCTTGGATGTATCACTACAAGAGTAGTAG GAACAACACGGGCCGAGGTGCGGGCCATGTCACTAGAGACCTCAGGATGT AGTGTGGGTCAAACGATCGAATATCGACTATCGATGGATACAAGTCCATA CATAGATCAGTGCTGTCAACAAGGAGGTTGATTTGCTTGGATATTCCATC ACTGCCGCCAATGCCCTGCCCGCCGTCTGGGGCTCTCTTGTTGTGCCGCA GCGTCTGCCAGAGGATGAGAAGACACCTGGACTTCATGAAGGGCCTGGAC CCGGCCAGGCAAGTTCCACATTATAAAGTACTTCGAAGTACATGCTTGGA AGTATCTACATGCAGTAGTATCCTACATATGGCAGGCTATGCTTCAAAGT ACGTTCGAGGTGCCAAACATGTACGAAGTACTTGGAAGTATCTACAAAGT GTGAAATATGCCTCTTCCAAGTGAGTATATACTTCAAAGCATCCATGCAC ATACCACACGCGTTTACCGTTTGCCCTTCCTCGGGACCACTTTAGGACAC TACTTTGCCCTCCGCCAGGAGTACAGTGGCTCTTTTGCCATTGACGCTCG CATCCCAACTATACCGCTACTCGTACACTACATACATATACTGCGGTTTG TTTCGGAAAAAGCTGGCTGGACGCCACCGCACGCCAGGACGCCATGCTCA GCACACCCCAGGTGGGGTGCTTGGGCCGGAAAGTCCTGCCCCCGGCCAGA CTGGGAGGGACATGGCGCAAGCGTGTGTGCCCAGCAGCGAGTCCTGGCAG GCTGTCTCGGTGGTGCTGACCGTGACCCGCACCATGCCGGCTCAGACCTT GTGTGCCTTTTGGGAGGGCAGAAAAAGTGTTAATAAGCGAGTGGGACATA GTTGGGAGGCATCTCTGCTTCGCTCTTGCGAAAGAAGTGCTAGGAAGCTA TGTAGTGGGAAATAGTTGGGAGGCATCTCTACTTCACTCTTGCGAAACAA GTGTAGGAAGCTAAGTAGTGGGAAATAGTTGGGAGGCGTCTCTGCTTCAC TCTTGCGACAGAAGTGTTGGAATTCTACTTAACTCTTGCGAGAGCCCCGG GCCGCGAAGCGGAAGCTGTTGTTGCTTGGCCATTCTCGCGAGCCTTGCCG AGAACCGGGAATCGCAGAACTCCCTTGCCAACTGGGAAAGGAGCGGGATC ATGTCTTCGACGGCACCTATGCCGTAAAGGGCCCCCGAGTGCGTACGAGC AATCGTACCGCGGCTTTCCCGGCTTGAGCGAACGGTTTGATGCTGAATTA TTCAGTGATTCCCGGTTTTCGGGAAGGCTTGCGCGAAAGATCAAAGCCTG GCAGAGTCTGAGCGAACGGCCGATGACCTGTAAATTGTCCCTTTTGTGAG CAGTTGAAGAGAAACTACGCGGGCGGCAAAGTGTTAAGAGGCGTCTCTAC TTAACTCTTTTGAGAGCCCCGGGCCCCACCATGGAAGCCCTTCCTCCACG CGCCTCCACTCGCAGGGCAAACGACTGTTGTCCTTGCGTGTATGTTCTTC GGAGCTTGGTTGTTGTGCACTGGTGAGGTCCCCACTGCAGCTTTTGGGAG GGGTCCCGGAACTCGCACGCCATCACAATGGTCATATACTACGTAGTATT TGCCCTGCGAGTGAGGGCGAGTGACAGGAAGGGCGTCCGAGGGCGGGGCC CTGAACTCGCGCAAGTAGGGACACCTCTGCTTTCCCACTCGCCTGTTTGT CTTCTTGCAAAAAATGATCAATATCCAATGACAGAGAGAAAACCAGGCCC CTATTGCTATGACCTGTATTTGCACCTTTCGCCCGCCTTTGCAGATACCG CCGCCTGCGGTATGAGGACGCCAGAGGTTCAGTGCTCATGAAATTTCCCC TTTCAACCCCCTGCAGATACCACCGCCTTCGGTACGAGGACGCCACGGTA TCAGTGCTGGATGCGGCCCGCGGCATCTATCGCTGGGCGGGCCTGGGCGA GGTGCCCCTGCCCATCCGCAGGTGGGCATGATGCCATTTGACTATGTGAT TGGTGGGCGGTGCGGTGCGATGAGAATTTTGTGAGGGCAGAGATGCCGTG CTTCAAGTAGGCGAATGGGATACAGTTTAGAGGGGTCTCTACTGCGCCAG AACACTCAAGTACTTCGGTACGAGGACGCCACGGTGTCAGTGCTGGATGC GGCCCGCGGCATCTCTCTCTGGGCGGGCCTGGGCGAGGTGCCCCTGCCCA TCCGCAGGTGGGCATGATGCCATTTGACTATGTGATTGGTGGGCGGTGCG GTGCGATGAGAATTGTGTGAGGGCAGAGATGCCGTGCTTCAAGTAGGCGA ATGGGATACAGTTTAGAGGGGTCTCTACTGCGCCAGAACACTCAAGTACT TCGAAGTACGTCCAAGTACTAGGTACTTGGAAGCATGTCAGCCGCTATCG CCGGTGGGCTCATCTATGGTGGGTTCTTCAAAGGGACGTGGCGTCTCGTT TTGTCTCATTCACTCGACCACGCACACGCACACACACACACACACACACA CACACAAGGCCTGTGCCCAAGACTTTACACACCATGCAGGGGCCGCCGCC TCCTCACCTCACACACGCCATCCATCCGCACACAGGTGGATCCAGAAGAA CACAGTCCTCCCAGGATGCACGCCTACCAAGCCTGGGCCCAAAAAATCCA ACCCTGGGCGGGCCACTGGTGCCGGTGCTCGGCGGCAGCTGCTGGTCACT GCGCCGGGGGGGGGGGGAGGCTAT
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig87:20156..28579-

>mRNA_S-ischiensis_contig87.20221.1 ID=mRNA_S-ischiensis_contig87.20221.1|Name=mRNA_S-ischiensis_contig87.20221.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2022bp|location=Sequence derived from alignment at S-ischiensis_contig87:20156..28579- (Schizocladia ischiensis KU_0333)
ATGGAAGCGGCTGGAAATGGGCGGGAGCGGGAGAAGAAGCGATTGCTGGT
GGTGGCGCTCGGGCGCTCAGGATCGACCATGACAGATGGAAGCGGCTGGA
AATGGGCGGGAGCGGGAGAAGAAGCGATTGCTGGTGGTGGCGCTCGGGCG
CTCAGGATCGACCATGACAGGGGAGCTGTTCCGGGGCAACCCAAGGGCCA
TGTATTTCTACGAGCCGTGCCGCCGCGCTGTTTTCGTGCCGGCCCATGGA
GTGGTGGACCCCAAGGGGAGCTGTTCCGGGGCAACCCAAGGGCCATGTAT
TTCTACGAGCCGTGCCGCCGCGCTGTTTTCGTGCCGGCCCATGGAGTGGT
GGACCCCAAGCCTGACAATGACCCGGGCTGTGCGGAGCTGATGGAAAGGG
TGCTAAACTGCAACTTCACGGATGAAGACATCCGCACCATGGGGGCTGAC
CGACGGGCAACAATAGTGTCCTCACGGCCTGACAATGACCCGGGCTGTGC
GGAGCTGATGGAAAGGGTGCTAAACTGCAACTTCACGGATGAAGACATCC
GCACCATGGGGGCTGACCGACGGGCAACAATAGTGTCCTCACGGTTTGTG
GCGTACACATTTAACCAAGTGTACCAGGCCATGGACAAAACGGGGATAGT
CCCCGACCCGCAGGAAGGCTCGCCCAACGCCACCTACGTGGGGTACGGCA
AGCAGAGGTGGAGGTGGAAGGGCAAGGAGGTCGTGTTGGACAAGGCAAGG
AGGGCGCTCACCCGCAGTTTGTGGCGTACACATTTAACCAAGTGTACCAG
GCCATGGACAAAACGGGGATAGTCCCCGACCCGCAGGAAGGCTCGCCCAA
CGCCACCTACGTGGGGTACGGCAAGCAGAGGTGGAGGTGGAAGGGCAAGG
AGGTCGTGTTGGACAAGGCAAGGAGGGCGCTCACCCGCAGGTGCCAGTCA
GTGAATCTGGTGGCGGCCAAGGTGGTCCGGCTGGACGGTCTGCTGCAGTC
ACAGCTGGACGACCCACAGCTGTACGTCATGCACCTCGTCAGGGACCCCA
GGGCAGTCGTCCGCTCGCAGGTGCCAGTCAGTGAATCTGGTGGCGGCCAA
GGTGGTCCGGCTGGACGGTCTGCTGCAGTCACAGCTGGACGACCCACAGC
TGTACGTCATGCACCTCGTCAGGGACCCCAGGGCAGTCGTCCGCTCGCAG
ACGGAGCTGTGGAGCGGCGCAGGCGGGGCCGGGGGGGGAGCGGGGGACGA
GGAGGCCGAGAAATTGCAGCGGCAGAAGGCCCGCGAAGCCGCATACAAAA
AGGGCACCATACGGAGCTGTGGAGCGGCGCAGGCGGGGCCGGGGGGGGAG
CGGGGGACGAGGAGGCCGAGAAATTGCAGCGGCAGAAGGCCCGCGAAGCC
GCATACAAAAAGGGCACCATCGTCTGCCAGAGGATGAGAAGACACCTGGA
CTTCATGAAGGGCCTGGACCCGGCCAGCGTCTGCCAGAGGATGAGAAGAC
ACCTGGACTTCATGAAGGGCCTGGACCCGGCCAGATACCACCGCCTTCGG
TACGAGGACGCCACGGTATCAGTGCTGGATGCGGCCCGCGGCATCTATCG
CTGGGCGGGCCTGGGCGAGGTGCCCCTGCCCATCCGCAGATACCACCGCC
TTCGGTACGAGGACGCCACGGTATCAGTGCTGGATGCGGCCCGCGGCATC
TATCGCTGGGCGGGCCTGGGCGAGGTGCCCCTGCCCATCCGCAGGTGGAT
CCAGAAGAACACAGTCCTCCCAGGATGCACGCCTACCAAGCCTGGGCCCA
AAAAATCCAACCCTGGGCGGGCCACTGGTGCCGGTGCTCGGCGGCAGCTG
CTGGTCACTGCGCCGGGGGGGGGGGGAGGCTATGTGGATCCAGAAGAACA
CAGTCCTCCCAGGATGCACGCCTACCAAGCCTGGGCCCAAAAAATCCAAC
CCTGGGCGGGCCACTGGTGCCGGTGCTCGGCGGCAGCTGCTGGTCACTGC
GCCGGGGGGGGGGGGAGGCTAT
back to top