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Homology
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A7S2UAH5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAH5_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.700e-41 Identity = 71/106 (66.98%), Postives = 79/106 (74.53%), Query Frame = 1
Query: 118 MSGAGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS*TRARGGVR 435
MSGAGIAR RL ERK WRKDHP GFYARP + DGATN+M+W+ GIPG E TDWAGG+YKVT+ F +EYPSKPP CRFVPPLFHPNVY + S G R
Sbjct: 1 MSGAGIARGRLIEERKAWRKDHPFGFYARPVPTGDGATNIMKWDTGIPGKEATDWAGGVYKVTLEFNEEYPSKPPKCRFVPPLFHPNVYPSGTICLSILNEEEGWR 106
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A7S2Y0C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0C7_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.830e-40 Identity = 67/97 (69.07%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 118 MSGAGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS 408
MS GIAR RL ERK WRKDHP GFYARP +S D +TNLM+WE G+PGPEGTDW GG+YK+TM F++EYPSKPP C+FVPPLFHPNVY + S
Sbjct: 9 MSAGGIARGRLIEERKAWRKDHPYGFYARPMMSDDNSTNLMKWECGMPGPEGTDWEGGMYKLTMEFSEEYPSKPPKCKFVPPLFHPNVYPSGTVCLS 105
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A7S4HWQ1_9STRA (Hypothetical protein n=3 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4HWQ1_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.620e-38 Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 103 NKNVPMSGAGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS*TRARGGVR 435
N+ + + AGIAR RL ERK WR+DHP GFYARP DG+T+LM+WE G+PG EGTDWA G+YKVT+ F++EYPSKPP C+FVPPLFHPNVY + S G R
Sbjct: 34 NEGIIIMSAGIARGRLVEERKNWRRDHPFGFYARPTSKGDGSTDLMKWESGVPGKEGTDWATGVYKVTLEFSEEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWR 144
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A7S1BQ03_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQ03_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.200e-37 Identity = 65/104 (62.50%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 124 GAGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS*TRARGGVR 435
G GIAR RL ERK WRKDHP GFYARP S DG++N+M+WE GIPG G+DW GGLYKV+M F++EYPSKPP C+F PPLFHPNVY + S G R
Sbjct: 8 GGGIARGRLSEERKAWRKDHPFGFYARPVASGDGSSNMMKWEVGIPGKAGSDWEGGLYKVSMEFSEEYPSKPPKCKFTPPLFHPNVYPSGTICLSILNEEEGWR 111
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A7S3ZX43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX43_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.960e-37 Identity = 64/103 (62.14%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 127 AGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS*TRARGGVR 435
AGIAR RL ERK WR+DHP GF+ARP+ S DGATNLM W+ G+PG +GTDW GGL+KV M F+++YPSKPP C+FVPPLFHPNVY + S G R
Sbjct: 2 AGIARGRLSEERKAWRRDHPFGFFARPSSSGDGATNLMSWDAGVPGKKGTDWEGGLFKVRMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWR 104
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A7S1FY89_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY89_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.570e-37 Identity = 65/104 (62.50%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 124 GAGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS*TRARGGVR 435
G GIAR RL ERK WRKDHP GFYARP S DG++N+M+WE GIPG G+DW GGLYKV+M F++EYPSKPP C+F PPLFHPNVY + S G R
Sbjct: 8 GGGIARGRLSEERKAWRKDHPFGFYARPVASGDGSSNMMKWEVGIPGKAGSDWEGGLYKVSMEFSEEYPSKPPKCKFTPPLFHPNVYPSGTICLSILNEEEGWR 111
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A6U0IJL9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IJL9_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.760e-37 Identity = 66/106 (62.26%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 118 MSGAGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS*TRARGGVR 435
MSG GIAR RL ERK WR+DHP GFYARP DG++NLM+W GIPG E TDW+GG+YKVT+ F++EYPSKPP C+FVPPLFHPNVY + S G R
Sbjct: 1 MSG-GIARGRLAEERKNWRRDHPFGFYARPESKGDGSSNLMKWATGIPGKENTDWSGGVYKVTLEFSEEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWR 105
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A835YNI1_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI1_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.150e-36 Identity = 65/97 (67.01%), Postives = 75/97 (77.32%), Query Frame = 1
Query: 118 MSGAGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS 408
MSG GIAR RL ERK WRKDHPIGFYARP +PD + NLM+W+ GIPG +DWAGG+YK++M FT EYPSKPP C+FVPPLFHPNVY + S
Sbjct: 1 MSG-GIARARLAEERKAWRKDHPIGFYARPVSNPDNSMNLMKWDCGIPGVASSDWAGGVYKLSMEFTDEYPSKPPKCKFVPPLFHPNVYPSGTVCLS 96
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A067MJ87_9AGAM (UBC core domain-containing protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MJ87_9AGAM) HSP 1 Score: 142 bits (358), Expect = 2.020e-36 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 127 AGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVY 384
AGI R RL ERK WRKDHP GFYARP+ SPDG+ NL++WE GIPG GT W GG+YKVTMTF ++YP+KPP C+F PPLFHPNVY
Sbjct: 2 AGICRLRLAEERKQWRKDHPFGFYARPSKSPDGSMNLLEWEVGIPGKAGTAWEGGVYKVTMTFPEDYPTKPPKCKFTPPLFHPNVY 87
BLAST of mRNA_S-ischiensis_contig87.20220.1 vs. uniprot
Match: A0A835YMN0_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN0_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.980e-36 Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 127 AGIARERLQAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYKVTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS*TRARGGVRAS 441
AGIAR RL ERK WRKD PIGFYA+P +PD + NL++WE GIPGP+GTDW GG+YK+ M FT++YPSKPP+C F P+FHPNV+ D + S G R S
Sbjct: 3 AGIARARLAEERKSWRKDRPIGFYAKPVTNPDNSMNLLEWECGIPGPKGTDWEGGVYKIAMVFTEDYPSKPPVCYFESPIFHPNVFTDGAICLSIINEEYGWRPS 107
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 143.7 |
| Seed ortholog evalue | 6.5e-32 |
| Seed eggNOG ortholog | 35128.Thaps21811 |
| Preferred name | hus5 |
| KEGG ko | ko:K10577 |
| KEGG Pathway | ko03013,ko04064,ko04120,ko05206,map03013,map04064,map04120,map05206 |
| KEGG Module | M00427 |
| GOs | GO:0000003,GO:0000022,GO:0000070,GO:0000122,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000795,GO:0000819,GO:0001101,GO:0002178,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005720,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006066,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006629,GO:0006643,GO:0006644,GO:0006665,GO:0006667,GO:0006670,GO:0006672,GO:0006684,GO:0006686,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008610,GO:0008641,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009719,GO:0009725,GO:0009737,GO:0009790,GO:0009791,GO:0009793,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010154,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010629,GO:0012505,GO:0016020,GO:0016043,GO:0016239,GO:0016241,GO:0016604,GO:0016605,GO:0016740,GO:0016874,GO:0016877,GO:0016925,GO:0017059,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019637,GO:0019751,GO:0019787,GO:0019789,GO:0019899,GO:0019904,GO:0019941,GO:0019948,GO:0022402,GO:0022414,GO:0030148,GO:0030163,GO:0031211,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031399,GO:0031401,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033233,GO:0033235,GO:0033993,GO:0034311,GO:0034312,GO:0034641,GO:0035339,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043603,GO:0043604,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044388,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045892,GO:0045934,GO:0046165,GO:0046173,GO:0046467,GO:0046511,GO:0046512,GO:0046513,GO:0046519,GO:0046520,GO:0048285,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051231,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051347,GO:0051603,GO:0060255,GO:0061458,GO:0061650,GO:0061656,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071535,GO:0071704,GO:0071840,GO:0080090,GO:0090407,GO:0097164,GO:0097305,GO:0098796,GO:0098813,GO:0098827,GO:0099086,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901700,GO:1902494,GO:1902679,GO:1902850,GO:1903047,GO:1903182,GO:1903320,GO:1903322,GO:1903506,GO:1903507,GO:1903755,GO:1904502,GO:1904504,GO:1905961,GO:1990234,GO:1990356,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | Belongs to the ubiquitin-conjugating enzyme family |
| EggNOG OGs | 2XC0S@2836,COG5078@1,KOG0424@2759 |
| COG Functional cat. | O |
| Best tax level | Bacillariophyta |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko04121 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1621 |
| Cds size | 411 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817351.0315056-CDS-S-ischiensis_contig87:5555..5744 | 1622817351.0315056-CDS-S-ischiensis_contig87:5555..5744 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 5556..5744 + |
| 1695741048.214867-CDS-S-ischiensis_contig87:5555..5744 | 1695741048.214867-CDS-S-ischiensis_contig87:5555..5744 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 5556..5744 + |
| 1622817351.0423872-CDS-S-ischiensis_contig87:7006..7084 | 1622817351.0423872-CDS-S-ischiensis_contig87:7006..7084 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 7007..7084 + |
| 1695741048.2279792-CDS-S-ischiensis_contig87:7006..7084 | 1695741048.2279792-CDS-S-ischiensis_contig87:7006..7084 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 7007..7084 + |
| 1622817351.053463-CDS-S-ischiensis_contig87:8951..9020 | 1622817351.053463-CDS-S-ischiensis_contig87:8951..9020 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 8952..9020 + |
| 1695741048.236993-CDS-S-ischiensis_contig87:8951..9020 | 1695741048.236993-CDS-S-ischiensis_contig87:8951..9020 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 8952..9020 + |
| 1622817351.0675285-CDS-S-ischiensis_contig87:9763..9830 | 1622817351.0675285-CDS-S-ischiensis_contig87:9763..9830 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 9764..9830 + |
| 1695741048.2503164-CDS-S-ischiensis_contig87:9763..9830 | 1695741048.2503164-CDS-S-ischiensis_contig87:9763..9830 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 9764..9830 + |
| 1622817351.0809314-CDS-S-ischiensis_contig87:12240..12248 | 1622817351.0809314-CDS-S-ischiensis_contig87:12240..12248 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 12241..12248 + |
| 1695741048.2630842-CDS-S-ischiensis_contig87:12240..12248 | 1695741048.2630842-CDS-S-ischiensis_contig87:12240..12248 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 12241..12248 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817351.0923634-UTR-S-ischiensis_contig87:12248..12395 | 1622817351.0923634-UTR-S-ischiensis_contig87:12248..12395 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig87 12249..12395 + |
| 1695741048.2770414-UTR-S-ischiensis_contig87:12248..12395 | 1695741048.2770414-UTR-S-ischiensis_contig87:12248..12395 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig87 12249..12395 + |
| 1622817351.1035175-UTR-S-ischiensis_contig87:13003..14065 | 1622817351.1035175-UTR-S-ischiensis_contig87:13003..14065 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig87 13004..14065 + |
| 1695741048.2883317-UTR-S-ischiensis_contig87:13003..14065 | 1695741048.2883317-UTR-S-ischiensis_contig87:13003..14065 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig87 13004..14065 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig87.20220.1 >prot_S-ischiensis_contig87.20220.1 ID=prot_S-ischiensis_contig87.20220.1|Name=mRNA_S-ischiensis_contig87.20220.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=137bp
GDTRERRSLRAAKPPPGGRNCSGDQDQDLLDCLGNKNVPMSGAGIARERL QAERKGWRKDHPIGFYARPNVSPDGATNLMQWERGIPGPEGTDWAGGLYK VTMTFTQEYPSKPPLCRFVPPLFHPNVYMDASASAS* back to topmRNA from alignment at S-ischiensis_contig87:5556..14065+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig87.20220.1 ID=mRNA_S-ischiensis_contig87.20220.1|Name=mRNA_S-ischiensis_contig87.20220.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8510bp|location=Sequence derived from alignment at S-ischiensis_contig87:5556..14065+ (Schizocladia ischiensis KU_0333) GGCGACACAAGGGAACGCCGCTCTTTGCGCGCTGCCAAGCCCCCCCCGGG
AGGAAGGAACTGTTCGGGGGACCAGGACCAGGACCTACTAGACTGTCTTG
GTAACAAGAACGTCCCGATGAGTGGGGCGGGGATTGCAAGGGAGAGGCTG
CAGGCAGAGCGCAAGGGTTGGCGGAAAGACCACCCAATCGTGAGTCCAAG
AGAATGTGCAGTACGCGTTGATGTGTTATGTTGTATGGTCTAGTAGGAAT
CCAACGCCGATGCCGCTCATCGTCGTTGCCGTCGCACGTACGCTCATCTG
TACTTGACAACTGCACGTAGCTCACGTCCCGAAAACCCGGTACCGTATGC
TCCGTCCCGGCGAAGTGGGGACGCGAGGCCAATGGCCGAAAAGCTAGCCC
GCGGGGGCTGGCCGGTGGTCCAGCAAGCAGTACTGTAGTAGTATACTGGG
CCGATGGCCGGTGGCATGCACATCCCATGCCCTGTCCGACGTGTATACAC
ACACTCAGGGAAGTGTAGTTTATATTCAAGTGACTCCCTCCTCCCTTTCT
CCACTGTACGCCTGAGTCGCTTCCCGTTGCTGATGGGTGAATGGGCGGGC
CACTGTTCAGTTTCCTTTTTTGACGCGCTTTGGTGGCACTGTATGCTCGT
ACGGCATGTACTCACGCCTACTGTAGCGGTGCTGCTGATTATGCTCGCAC
CGCATGTACACACACCTAGCAATGCCTGCTGATTGAGTATGCTGGGACAT
TGGCTCACGCGCCTCGGAAATCCGGAGCAGGCCCCCTCCCGACCCTGGCA
CAGCCAGGGTGGACGGGGTGCTCTCCTATTGGCGGAATGATGTTAGCAGG
TCTTCAGCGCATCAAGCTGGCACGAGTGTACGACCTGTGCCGATTTGAGC
CACAGTGGCCACAGTTTGGTCTGCCCGGGACTGGTCTGTGGCTGACCAAT
AGGCCATGATGGGCATGGAGAGAAGAGGGAAATTAGTAGGTACACACGCA
TATATACTGCTGCAAGTACTCGTACCTGCTTGCTCAATACACTTCGAAGG
AAACGTACTTCCGAAGTGCTTGCACAATGTACTGCTGTAAGTACTCATGT
ATTCGTACTCAGAGAGCTATGCTTCGAAGGAAACAAACGAGGACTTCCGA
AGTGCTTTCATACATGTGTGCACTCGTACATACCTATTCATATGCTTCGG
GGAAAACATACTTCTGCAGTGCTTACATATATGTGTTCACCCGAGTACTC
GTATCTACCTGCTCATATGCTTCGAACGAAACATACTTCCGAAGTAGTTC
TTACTGTACATATACGAAGTATGTTTGTATTCATATGTTTATGTGCGTGT
CCGTGGGTGCTTCTGGTATATTCCCTGCTATCCTCACTTGGTGGAAAAGC
AAGGAATGCTGAAGCGATGCTTGAAATTGAGAATCCCGTTTGATCCCCCA
GGGCTTCTATGCGCGGCCCAACGTGAGCCCAGACGGGGCAACCAATCTGA
TGCAGTGGGAACGTGGCATACCCGGGCCGGTGAGTGGGCCTGCTCTGCTG
CTTTACGTGTGATTCGTAGACTTTGTGGTTGGGATGACGTATTTTGTGAG
GTGCAACGTAGTCCCACGAGTGCGAAACTGGTTGTGCTCACAGAAATGGG
TGTGACGCGATGTCGAACTGCAGCTATATATATACTTTGAAGTACTTCGA
AGTATGTGTAGTATATCTGCTCCGTCTCGACCGAGGTGCGTGGTCGATGG
TCTCGGGACCACGGCAAGCACAACGTGAGTACATACATTGTGCTCATGTC
CGACAGGTTGTTATTGCCTCGTTTGCTGTGCGTGCCGGCGACCGTCGGCC
CAGTATAGTCCGTGCTGGGCCGCGGATCTGCCCCCGTAGGTTGCCGGGTA
GCCTTTCAGTATACTCCATCTCGTGTGAGTAAACATCACATCACATCACA
CCACGGACCGGGCGAGGTGCAGTCCAGTCCCACGCGCGTTAAACTGAGTG
GTCTCGGGACTACGGCAAGCACCACGTGAGTGCATGTATACTCTTCGTAT
ATAACATCACTTCGCTGAGTGTGTGCTCGCCGAACATTGACCGGGCACAA
CGGTATGCACACGGTATACTGGGAAAGCGATTTGACTGTAAAACAGTTTG
CATGACGGCTTAGGATATGGTTCAGATGTTTCTGGTCATTCTGATGGCCT
GTTCTGTTCTTTGGATGAGCCGCGTTGCGCACCGGCTGCATCCATGGGAA
TATGTGGGCCGTTCTATTGTTTGGGTGAGCCTTATGTATTGGTTGCAACC
ATCGAATACGTGGGCCTCTTGGTTGGTTGTTTCCGATAAGGGGGGGGGGT
CATTTCTGGGTTTCAGTCTACTGTGATTCAATCTGCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCCCCTTCCCCAGGC
AATCCTTTTCTCGCGAGCTAAGGAAGGGCCACTGTTGAGGTCTCTAGCGA
CGTGGCCTGCACCTCGCCCTGTGGTTTTCCTGTTGATACTGTGATTCCGG
TTCTCGAAAGGGTTGAATATTTTGCGGGGTACGCTGTGGCCTGTGTGAAA
TTGGGTGTGCTCGCTGAGATTTCAAGCGGGCGAACCGATAGCAGCTCCTG
ATAGTAGCAGTTTCTGATTATGGATTTGATTTTGGCCGCATTTCAGGGAC
GGGGAAATGAAGGACGAGCTGCGGCGTTTAACCCTTTTGCCCCTGGATCC
GTACAATCATAGAGTTTTAGTGTGTGAAATTTCAATGTAGCAGGGATAAA
AGGGCTAACTGCTCTGCCGCTCTGGCAAGCCGAATCAGGTCCGGTTAATG
AATCGATACATTTGGTAAGTACGTCATGGCTTCCTTTCTGGGTTCTTAAA
CGTATCCGTCACGAATATTGTACTTCGAAGTAGTTAATACTTCGAAGTAT
GAACTGCAATTTAGTTCATATGAACTGCCCCCGGTTCACCCACTCAATCT
CTACGAGAACACTCAATTCAACAGGTGAATCATACTTCGAAGTACCTCGG
TACAATGTAGCACAAGAGGACCCCCGCCCGCTTTGTCTATAGCCCTGCTT
GTTGCTACTTTGCTTGGTTTCTGTGCGCTGCGAGTGAGAGAAGTGTCAAC
TCTTCGGGTGAGGTCCCGTTTTAATGTGATGTGATGTCAAACTACAGTAA
ATTAGAGTACACATCACATCACATCACATCACAATACCGAGTCAAAGGAG
GGCTAAACTCTCCTGTTGAGGTCCCCCCACCATGGGTTTTGGGACGGGGC
CCGGAACTCACACGCCATCGAACCCGACCAGCCACAACAGTTCTTCGAAT
CAGAGCGTGGCTTAGTGGTTTTTCACTCGTCTGCCCTGCTGGTCAGGAGG
GCACGGACTGGGCCGGGGGCCTATACAAGGTGACAATGACCTTCACCCAG
GAATACCCCTCCAAGGTGCGGCTGATTCTCGTCAGTTTAGCCTACTGTCC
TCCTCCTCCTCCTCCCCGTCCTCCTTTTCTCCCCTTCCCCACACAAACTT
CCCCTGGCGAGCTGTAAGGAAAGGCCACTGTTGAGGTCTTTAGTGACGTG
GCCTGCACCTCGCCCTGTGTTGTTCCTGTTAACATCATACTACTGCGGTA
GCTCCAGGGAGGGAACAGCGTGGGATTGTGCGAGTGTACTATGCGCAGTA
GCTGCTGTACAATGAGTCCATACGAGTACTTGGAAGTACGAGCGCAGTAC
TGGACGGGCTAGTTAGTATCTGGTGAGGTCCCGGGCCCGTTCTCCGCCTA
ACTATGTGCTTGGGTTACGAAGAATGCCGCCTCCCAACTACTGTGCCCGG
TGCATTGAAAACGCTACAGTACATACTCGAGTTCCCCCAAACTGCAGGAC
GTGCCGCCACTCTGAACTGCTTGGGTGAGTGGAAATGCCGCCTTTTGACT
ACTGTGTCTGGTGCATTAACAACGCTGCAGTGCATTCCCCCAAACTATAT
TGTCTCGTACTTTCTTCCCCGGAAGTACAATGTGCCCTGTGTACGGCCCA
GCTTCTGGGACGGGGCCCGGGGCTCACTTGCGTAGAGTACATGTTGCCCC
GCGCGCCTGCCCGCTGCCGCTTCCGCCGCCGCCCGCCCTCCCACCGAACC
GCCCGCCCGCCCGCTGCCGCCTCCGCTGCCGCCACCGTCGTCTCCCCGCA
TTCTGCAGCCTCCATTGTGCCGGTTTGTCCCCCCCCTCTTCCACCCCAAC
GTCTACATGGACGCATCTGCCTCAGGTGAGCGCGCTCATGTGCGGCACTT
TTGTTGGTCAAGCCCCACTGAGCTGGCCAGGCGCTATCAGGCACTGTAGT
ACGTCTAGAGGCACGGACTTGCTGACCGGCTTGCTCGTCTTGCGGCGCAG
CCTTGCGGGCCATTTCGACAGCCCAACAGTCGAACTTTGGGTTTGTGCCC
TCCTGCGGGAGTTCAGTAGCCATTTAGCCATTGCCTCTCACGTTTTCGGC
CAGTGCACGTGCATGCACTTGTGGGTGATTCATATTAATTGTCAAAGAAA
TTCAAAAAGTTGCACTTTCGGAATACTCGAGTAACAACGAGTAATCGCAC
GTGTGTGAGATTGAGTGTTGTACTTGTGGGTACCTGGGAGTAGTACAGTC
CAGTACTGTACTGTACTCATACAGTACAGTACGAAACGGTGCAGCAACAT
TGCTCCCGCGCGTGTGCGCCACAGTTTTAGTGTGAACAACGCAGGGCGAG
GTTCAGGCCACGCCACGAAAGGCCTCAGCGGTAGGCAGCGATGCGATGCT
ATTTGATGTGATGCCATGTGGTGCGTGATGTGATGTGATGTGCAATCTAC
TCTACAGTAGTTCTGACATCACATCACACATCACACCACGTCGCTAAAGA
CCTCGCCAGCGGCCGGCCCTTCCATAGCTCGCCAGGGAAGGGGGTTGTGG
GAAAGTGGGGGGGGAGAACGGGGAGAGGTGGTGGAGTACAGTACAGTACT
AACAGGAACAACACGGGGCGAGGTGCAGGCCACGTCGCTAAAGACCTCAA
CAGTGGCCCTGCCGTTGCTCGCCAGGGAAGGGATATGTGCGGAAGGGGGG
CGTCGGTGTGTTGGATGCCAGTACTCCTTGAAAGCACCAGTCCAGCGAGT
TACACCAGTGGAGGCGTAGACTAGTGGTACTTGCTGAGACTGTGCGCATG
TAGCGCCTATTCCTGTTCTCCAGTCAGCGGAGTTACAGTACGTGCGTGTG
TGTGCGGGGGGGTGTCGGTGTGTTGTGTGCGGGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTCACGTCGGACAGGGGAT
ACCCCGTCCTGTGCATGCCACCGACCGTGTGTATTCCCAGTATACTACAG
TACACTACTAGTACTCGCTCAATCGTTGGCCAGTAGTACCCCCGCAGGGT
GCAGGGCAGCCTTTCGGGCATGGGCCAGGCGGTACAATACAGCACTTTCT
GGACCGCAATCTTTGGAGAGGCAAAGATCTTGATGTCATGTGATGTGATG
TCAAACTACAGTACATCAGAGTACGCATCATATCAAATCACATCGAATCG
TATCATGTGCCGTAATCGTCGCAGATCTAAAGGTCTTTCCCCCCCATGCC
AAACTTTGCAGGGTCATTTCTTGCCGAATAATTAGTACCGGTCGGATTCG
CACGGAGAAACGAAGGAAAACTCGGAAAATCCTGTACCCTCGGAACCTGA
AGGAACTAGTCCTCGGGAGGGAGTTCGGGACAACTCTTCCAACCTTTTGC
ATCCAGCGAGATATGCTCTCCGGAAATTTGTCCCGGGGGGGCAAGACCCT
CAACTCCTCGACGATTCCGTTGCTTGGTGTGATTTATGCGATGAGATTTG
CTTCAATGTACGCTTCGCTTCGACCCCGCCTGGCCCCTGCCCCAGAAACC
CCATCCCCACACACTCGAAGTCACTCTTTGCCCATTCCCCACACCACGCC
CACATGATCCCCCGTCCCGTCCCGTCCCAGCATGCGCATGCAACCAGCCC
ATTTATGTATGTTCCTGATCTCTTAAATGTGACAACCACTCAACGCCCGT
ACGATAACACTCAATCTCACACACGTGCGATCGTACCTCGTTGCAATTCA
TATGAATCACTCTACTGCACGCAGTTTGACATGACACCACATCACATCAA
GATCTCCCTGACGATTGCGGTGTTGACTTCACCCTGCATCCGCTGATGCA
CCCCTACAACTGTGTAGTGAGTGCCCTCTTGCACTTGCAGCACCCCTGTA
GAACGCAGTCAGGGCATGTTCATCCGCTCAAACCCTATAGTTAGTGCAGC
TTCGGCCGCTCCACCCCTGTAGTTACTTAGCCCGCCTTCATCCGCCGCTA
AACCCATACTGTAGTATTTTAATTGTTTAGCGTCCCTGGGCCCTCCAGAG
GTGCAACTACCGCTCCACCCCTGTAGTTACTTAGCCCACCTTCATCCGCC
GCTAAACCCATACTGTAGTATTTTAATAGTTTAGCGTCCCTGGGCCCTCC
AGAGGTGCAACTACTGTAAGGGAAGGGCTTCTGCGAGTGGGGCCCTGAAC
TCGCGTAAGTAGGAACACGTCTTCTTTCCCACTCACTTGTTTATCTTCTT
GCAACAAACTACTTGGGCCCTGGCACTGCTTGCAGCATCCTGAACGAGGG
CCAGGGGTGGCGTCCGGGCATCACCGTCAAGCAGATGCTGGTGGGCATAC
AGGACCTGCTGGACTCTCCCAACGTGGGCGACTCCGCATAGGCGCCTGCG
CACGATCTCTACACTTGAGTAACAAGACAAGCAAACAGAGGTGTCCCTAC
TTGACGCGATGCGCTGAATCCCACCCCCGGAAGCCGTTCCTTTCACTGGC
CTTCACTCGCAGTATTACTCGTGGCAGGACAAATACAGGGCGAGGTGCAG
GCCACGGCGCTAAAGACGTCAACAGTGGCCCTTGCTGGGAAGGAGAATGG
GAGGAGGAGGAGGCACAGTAGTGCCAGTTTGGTGGCTGCATCTCGAACGA
CGTCGAGTGCATGGTTGGGGGGGGTAGTCGCATGTGCCAGGGGACGCGCG
CTATGTGTGTGTGCGTGCGTGCGTGCATGCTTCTTATGTGTACACTATCC
ATTGGCACCGGCTACCCCCCCAGGACGGGCGCTTCCCTCCCCCACCAACT
CCCTACCTACCTCACTCGCTCCCCCCTCCCGCCCACCGCACCCCTGTCGC
TGTGGCCCTCTCTCCATCCTTTCCTCCCCCCCCTCCCGACCACCCTTACA
CTCCTGGGCGCGGCACATGCCCTCCGCCGCCCCCCATGTGCACGCTTCTC
TCTCCCTCTCTCTGTCTGGTGTGTGCGTACTTGAGCGCCTGCCTGCGTGC
GTGCGTGTGCGTGTGCGTGCGTGTGTGCGTGCACACGCGCCCCTGCAGCC
ACAACAAGCCCGCGTACAAGAAGCGCGTGCTGGCGGAGGCATTAAAGTAC
GCAGCATCCAAGGCCTTGAGGTAACCTAGAGCTAACCTACGCAGAGGTAA
CATGTTTCTTGCAGTCGTGGACCCCCCCACCCCTCTGCCAGATGGTTCCT
ACACGAAGCGATGGGGCCAAGTGGACCAGTGCACGTGTTGCTGGCACCGG
GGTGCACTCCAGGGGGGGGGCAAGCGGCCAGCCGGCCCCACGCTGTGCAG
GCCCGGCCCGAGGCTCGCCTGCGATTCGAAAAATGTACTGTACTGTTGTG
CCGGGTGTACTACTCGAAACTTACCTACTGTAGCGTTGCGATTACTGTAC
TGTGGTAGTGCAGTACTTGCCAAGTATGTTGTACTGTATTGTACAAAGTA
CTGCTTCCGGAAGTACATACACTAGTATCGTGATTACTGTACTGTGGTAG
TACAGTACCTACGAAGTAGTAGCCAGCTGCTTGTACAGTGCGTGATGACT
CCATAGGTCACATCCCCAAAGCTGTTGGTTTCCTCGAAGACGCTTGGCCG
AGTGGGTCGGGGTCGGGGGCGCGAAAACCGGCGTGCGCCCCCCGCGGCAC
TTGTCGACGAGTGCGTACGCATACAGTAGCTGTACACCTGCTGCCCTTGT
ACAGTAGCGTGTAGCTGTGCTGTGCTGTGCTGTGCTGTACTGCACTGCAC
TGCACTGTCCTGTACTGTACCATACTGTTCTGTACTGGACGGGTGCTATA
CTGTGCTGCAGTACCACGCACTCTACAGCAGTTCATGCACTATACTTCCC
TTCCGGAACGACGGTGTACCGTACCGTACAGTACTCCTGTACAGTACCGT
ACAGTACAGTACTCCTGTACAGTGCAATACTAGTGTATCTACTTACTCGT
ACGTGAATATAGCAATAATACTTGTCGTGTTCCAGGTGTGTGCGCCCTGC
GGAAATTCGAGTAACCCCACGCTGGAACAGAGGCCGGCGGGTGGGGCGCA
CGGAGCGGCTCCCGGAATCATAATCATAGTACTTCGAAGTACAATCATAA
TCAAATTAAC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig87:5556..14065+ >mRNA_S-ischiensis_contig87.20220.1 ID=mRNA_S-ischiensis_contig87.20220.1|Name=mRNA_S-ischiensis_contig87.20220.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=822bp|location=Sequence derived from alignment at S-ischiensis_contig87:5556..14065+ (Schizocladia ischiensis KU_0333) GGCGACACAAGGGAACGCCGCTCTTTGCGCGCTGCCAAGCCCCCCCCGGG AGGAAGGAACTGTTCGGGGGACCAGGACCAGGACCTACTAGACTGTCTTG GTAACAAGAACGTCCCGATGAGTGGGGCGGGGATTGCAAGGGAGAGGCTG CAGGCAGAGCGCAAGGGTTGGCGGAAAGACCACCCAATCGGCGACACAAG GGAACGCCGCTCTTTGCGCGCTGCCAAGCCCCCCCCGGGAGGAAGGAACT GTTCGGGGGACCAGGACCAGGACCTACTAGACTGTCTTGGTAACAAGAAC GTCCCGATGAGTGGGGCGGGGATTGCAAGGGAGAGGCTGCAGGCAGAGCG CAAGGGTTGGCGGAAAGACCACCCAATCGGCTTCTATGCGCGGCCCAACG TGAGCCCAGACGGGGCAACCAATCTGATGCAGTGGGAACGTGGCATACCC GGGCCGGGCTTCTATGCGCGGCCCAACGTGAGCCCAGACGGGGCAACCAA TCTGATGCAGTGGGAACGTGGCATACCCGGGCCGGAGGGCACGGACTGGG CCGGGGGCCTATACAAGGTGACAATGACCTTCACCCAGGAATACCCCTCC AAGGAGGGCACGGACTGGGCCGGGGGCCTATACAAGGTGACAATGACCTT CACCCAGGAATACCCCTCCAAGCCTCCATTGTGCCGGTTTGTCCCCCCCC TCTTCCACCCCAACGTCTACATGGACGCATCTGCCTCAGCCTCCATTGTG CCGGTTTGTCCCCCCCCTCTTCCACCCCAACGTCTACATGGACGCATCTG CCTCAGCATCCTGACATCCTGA back to top
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