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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 588 |
| Cds size | 579 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817345.3315845-CDS-S-ischiensis_contig86:100996..101308 | 1622817345.3315845-CDS-S-ischiensis_contig86:100996..101308 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 100997..101308 - |
| 1695741044.1129107-CDS-S-ischiensis_contig86:100996..101308 | 1695741044.1129107-CDS-S-ischiensis_contig86:100996..101308 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 100997..101308 - |
| 1622817345.3442488-CDS-S-ischiensis_contig86:103944..104073 | 1622817345.3442488-CDS-S-ischiensis_contig86:103944..104073 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 103945..104073 - |
| 1695741044.126824-CDS-S-ischiensis_contig86:103944..104073 | 1695741044.126824-CDS-S-ischiensis_contig86:103944..104073 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 103945..104073 - |
| 1622817345.3559642-CDS-S-ischiensis_contig86:104208..104313 | 1622817345.3559642-CDS-S-ischiensis_contig86:104208..104313 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 104209..104313 - |
| 1695741044.1384635-CDS-S-ischiensis_contig86:104208..104313 | 1695741044.1384635-CDS-S-ischiensis_contig86:104208..104313 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 104209..104313 - |
| 1622817345.368161-CDS-S-ischiensis_contig86:105071..105104 | 1622817345.368161-CDS-S-ischiensis_contig86:105071..105104 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 105072..105104 - |
| 1695741044.1483283-CDS-S-ischiensis_contig86:105071..105104 | 1695741044.1483283-CDS-S-ischiensis_contig86:105071..105104 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 105072..105104 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817345.3795707-UTR-S-ischiensis_contig86:105104..105113 | 1622817345.3795707-UTR-S-ischiensis_contig86:105104..105113 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig86 105105..105113 - |
| 1695741044.1584942-UTR-S-ischiensis_contig86:105104..105113 | 1695741044.1584942-UTR-S-ischiensis_contig86:105104..105113 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig86 105105..105113 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig86.20183.1 >prot_S-ischiensis_contig86.20183.1 ID=prot_S-ischiensis_contig86.20183.1|Name=mRNA_S-ischiensis_contig86.20183.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=193bp
MLKAGLVRDVQERLSRLTESLEAIKRENRDLRQRLRLSEAERRHLQGREG
GWDQGLHSHSHSHGHDLRDAVDAVLRGHAVNHHHYKYQQQQQVRSSGGGA
AGPDPPPGQGKKDIASLEAVIGSAIHQWRSAAASAVSAAAAGMGLGLGQP
HASSWEGAGPEAEEEEAAAVAAAAAAATTAAAGTTLPPGGSSR back to topmRNA from alignment at S-ischiensis_contig86:100997..105113- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig86.20183.1 ID=mRNA_S-ischiensis_contig86.20183.1|Name=mRNA_S-ischiensis_contig86.20183.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4117bp|location=Sequence derived from alignment at S-ischiensis_contig86:100997..105113- (Schizocladia ischiensis KU_0333)
GGGGCTGAGATGCTCAAGGCTGGGCTAGTGCGGGATGTGCAGGTGAGAGG
CAGTGATGGAATATCCATCAGTAGAAAGTGATCAGACTCGACTGATATTG
TGGATGGCGCTACTAGCTACTTGTGTTTGGCGTGGATAATACTATCGAAT
ATCGACTATCGATAGATATATACTCGTATATGGCTAAATAGCTACTCCTG
TCGGAGGGCAAACCCGAAGTTTTCACTTAGGGCTGTCGGCATTGCACGCA
CGGTTATGTCGCAAGACAAGCCAATGAGTACATATATATATATGTATACC
AGTATATATATATGTATCAGCACCGTCGATAAACAGGTTGATTTGCATAG
ATATTCCATCACTGGTGTGCATGGAGCTCCTGATGCCGCCGCCACAGCCA
GCTCAACCCAAGGTTCATATTTCTAGCGCGCCATGGCTTCTTGTTGCTGC
TTGCGGGAGAGTTTGTCTATACGTGCTCCTGCACCGTGACCTATTTTCCA
TATCCTTGCTCCCCGGCTTTCCTTTTGTGGTCCACTCCGTGCTTCGATGA
CCTACATCCCTGCTGTCCTACTGTCGTCGTGTTTCCCCTTGTCACTCCTG
CTCCTTCACCTGTCCTCCTCCTTCTTCTCCTGCTCCTCCTCCTTCTCCTC
GTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCCCCTCCCCC
TCCCCGTCCCCCTCCTCCTCCTCCTCGTCCTCCTCCCCCTACCCCGACAG
GAGCGCCTGTCCCGTCTTACGGAAAGCCTGGAAGCCATAAAGCGCGAAAA
CCGCGACCTCCGGCAGAGGCTTCGGCTCTCGGAGGCCGAGAGGAGGCACC
TGCAGGTACGGAACTCACGTTGTGCGTGCTGTAGTCCCGAGACCATTGAC
CACGCGCCTCGGTCGAGACGGAGCAATACATGGAATTGGAATAGCGTAGT
TGAACGATGTGTGCCTTTTTTCGCGCCTTGACTTGGCCAGGGGCGAGAAG
GGGGATGGGACCAGGGCCTCCACAGTCACAGCCACAGCCACGGTCACGAC
CTGAGGGATGCCGTGGACGCGGTACTGAGAGGACATGCCGTCAACCACCA
CCACTACAAGTACCAACAGGTGGGTGTGTGCAACACCTGTGCTTGGAAGT
ACTCGTACAGCTTACGCCGTCAACCAGCAGCACTACCACCAGGTGGGTGT
GTTTACTTGAGTTGTGAAGTGGTGAAGGACTACCAGTTTAGCTGTTAACC
GGTCGGTTGACCTGTCGGTTTTAGCTGGTTGCCGGTAACGGCTAACGTAT
GGCCAGAATCAACGAATAACGGTCATGTCACCCACTGTGGCTACACGATT
GGCCACCGGTCGGTTCCCCGGTGCAACCAGTTAACTGGTACCGACCGGAA
ACAACCGGCACCAGTTCGCAACACTAGTGTTTACACTTATACCGGTATGG
TGCAACCCAAAAGGTCTGTCGGTGAAATACCCGGCGTGCTCCGTCCAGTT
GGACGCGTAGCCAATGGCTTCGGCTGCAGCTGGCCGGCGATCCACGAGAG
GGAGCAATGACGAGGATCGTTCGGGTCCAGGGCATGCACGGAGACATGAG
CGCACACACTCTACTTCGTACAGCTTGTGCGGCGTGGGCGGGTTGGTGGG
TGGATGGGTATGGGGGGGGGGTTGCGCGTGCACGTGCTGGTGCTGTGATG
CAAATACTTGGAAGTACGCCTGTGTAGTGCGAGAATGTACAGTAGTTCGC
TGGCATGGGCGGAGTAAGTACTGCGGTGCTTCAAATATAGTGTGACAACG
AGTACGATCTCACCTGTCAAGGTCTTGGACTACAGCAAGCACAACATGAG
TGTGTGTACTCGCGTGTTCGGACGAGGTTTCTCGTCTCCGTGCATGCCCT
GGACCCGAACGATCCTCGTCGTTTCTCCTTCTCGTGGATCGTGAGTATAG
GTACTCACGTGGTGCTTGCTGTAGTTCCGAGACCATTGACCCCGCGCCTC
AGTCGAGACGGAGCAGGATGGTGAGTACATGTACAATCTCACCTGTGTGA
AATGGAGTGTGGCGTGGGCGGAGTATTTTTGCCGCGCGTTTTGTGCCTGG
GTGTTGGTGGCTACAAGTACCGTAATCGTCGGAGAGGTCTTGCCCCCCCA
TGCCAATTTCCGGGGGAGCTTTTCTCGCCGAATACTGGTCGGGTTCGCGC
AGGAAAACTTGGAAAATCTCCCTCAGGACCTGGGGGAAGGGTTTCCCAGA
GTTTGCTGATTCAGGACCTTCCCGGCTAGAAATATTCCCCCGATAATTGG
CCCGTGGGGGCAAAATCTCTCCGAAGATTGCGGTATCCTTGTCCCCCGCA
GGCGCTGCCGTGGGAGATAGCATCCATGTGCCGAATTGAACGGCCGGAGT
CGGCCAGATTCGGTCATTGCACTTACAGTACCATACAAGTAGTCAATTTG
AAGACTTGTGCTGCAGGTATATCGAAATACTGTACCTTGCCGTGCTACCT
GGGCGAGATACCGAGCACCAACAATTCACACGCGCGATTGTACCTCGTTA
CAATTAATAGGAATCACCACCAACAATTCACACAGGTCAGCACAAGGCGA
CCAGTGTCTGTGTGTGTACTCACCTTGGACTGGGAGCTAAACTACTAGTG
TTGTGAACTGGTACCGGTTTTTACTGGTCGGTACCAGTTAGCTGTTTTAA
CCGGTTAACCGACCGGTGGCCAATCGTGTAGCCGGAGCGGGTGACATGAC
CGTTATTCATTGATTTTGGCAAGACATTAGCCGTTACCGGCAACCAGTTA
TAACCAACCGGTCACACGGCCGGTTAACAGTTAAACTGGTAGGCCTTGCC
AGTTCACAACTCTATAAATTACCCCGCCCTGGTCATGCCACTGGCCATGG
GCCCTTGCTGGACCGCCGGCCATCCCCCGCAGTAGCCTTCGGAAGCCAGT
TTGTACAAACAATCCATGCAAGCTGTATATGTATGCACGATCTTCTCCTG
ACTTGTGAAGGCAAAGCCAGTCTGCACCTGCTGGTGGCTTTGCTCATCTC
AGCGACTGTCGCCCCGCATCCCCTTCCACGCTTGCAACGCTCTCTGAGTA
CTTGTTGAGTAAGTACTCTTGCCTACTGTACAATTGTAGCTCTTGCAGAG
GCTGAACGCAGGCAGTCTCCCCAAGAAGAGAGGAGACTGCGCTCCACCCG
CAGGGTCTTGGCCCTGTTGGTGTGTGGTCCATGTTCAGTTGCTACTGCTA
CAGTATGCAGTGCGTAGTACATGTACGAGTACATCTCGTACATACTGTAG
TAGGATAGTACCCGAGTACTCGTACTAGTGCGGTGATGTGGCCTGCACCT
CGCCTGTGCTCTTCCTGTTAATACTCTAGTACCCGAGTACTCATGGCTAT
CGCTGCGTTGCTACCGCAATCAGCTCATCATCTCTCCCTCTCTCTCCCCC
CTTCTCTCTCTCTCTCCCCCTCTCTCCCTCTCTCTCCCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCCCCCCCTCTCTCCCCCTCTCTCCCTCTCTC
TCTCTCTCTCTCTCTCCCCCTCTCTCCCCCTCTCTCCCTCTCTCTCCCTG
CCTCTCTCCCGCTCTCTCACTCCCTCCCTCCCTCACTCTCTCCCTCTCCC
TCTCTCCCTCTCCCCCCCCCCTCCCTCCCTCCCTCCCTGCCACCGCCCCG
GCCCACCGGCCCCGTCCACTACGTCCGTGTCCCTCCCCCCCTCCCTTCAC
ATCAGCAGCAGCAAGTGCGCAGCTCTGGGGGTGGGGCAGCAGGCCCGGAC
CCGCCCCCAGGGCAGGGCAAGAAGGACATAGCATCCTTGGAAGCCGTCAT
CGGCTCCGCCATTCACCAATGGCGCTCGGCCGCCGCCTCTGCCGTCAGCG
CTGCGGCGGCAGGGATGGGGCTGGGGCTGGGGCAGCCCCATGCCTCGAGC
TGGGAGGGGGCCGGGCCAGAGGCGGAGGAGGAAGAGGCGGCTGCGGTGGC
GGCTGCCGCTGCCGCCGCCACCACCGCAGCCGCAGGCACCACCCTGCCCC
CCGGGGGTAGTAGTCGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig86:100997..105113- >mRNA_S-ischiensis_contig86.20183.1 ID=mRNA_S-ischiensis_contig86.20183.1|Name=mRNA_S-ischiensis_contig86.20183.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1158bp|location=Sequence derived from alignment at S-ischiensis_contig86:100997..105113- (Schizocladia ischiensis KU_0333)
ATGCTCAAGGCTGGGCTAGTGCGGGATGTGCAGATGCTCAAGGCTGGGCT
AGTGCGGGATGTGCAGGAGCGCCTGTCCCGTCTTACGGAAAGCCTGGAAG
CCATAAAGCGCGAAAACCGCGACCTCCGGCAGAGGCTTCGGCTCTCGGAG
GCCGAGAGGAGGCACCTGCAGGAGCGCCTGTCCCGTCTTACGGAAAGCCT
GGAAGCCATAAAGCGCGAAAACCGCGACCTCCGGCAGAGGCTTCGGCTCT
CGGAGGCCGAGAGGAGGCACCTGCAGGGGCGAGAAGGGGGATGGGACCAG
GGCCTCCACAGTCACAGCCACAGCCACGGTCACGACCTGAGGGATGCCGT
GGACGCGGTACTGAGAGGACATGCCGTCAACCACCACCACTACAAGTACC
AACAGGGGCGAGAAGGGGGATGGGACCAGGGCCTCCACAGTCACAGCCAC
AGCCACGGTCACGACCTGAGGGATGCCGTGGACGCGGTACTGAGAGGACA
TGCCGTCAACCACCACCACTACAAGTACCAACAGCAGCAGCAAGTGCGCA
GCTCTGGGGGTGGGGCAGCAGGCCCGGACCCGCCCCCAGGGCAGGGCAAG
AAGGACATAGCATCCTTGGAAGCCGTCATCGGCTCCGCCATTCACCAATG
GCGCTCGGCCGCCGCCTCTGCCGTCAGCGCTGCGGCGGCAGGGATGGGGC
TGGGGCTGGGGCAGCCCCATGCCTCGAGCTGGGAGGGGGCCGGGCCAGAG
GCGGAGGAGGAAGAGGCGGCTGCGGTGGCGGCTGCCGCTGCCGCCGCCAC
CACCGCAGCCGCAGGCACCACCCTGCCCCCCGGGGGTAGTAGTCGCCAGC
AGCAAGTGCGCAGCTCTGGGGGTGGGGCAGCAGGCCCGGACCCGCCCCCA
GGGCAGGGCAAGAAGGACATAGCATCCTTGGAAGCCGTCATCGGCTCCGC
CATTCACCAATGGCGCTCGGCCGCCGCCTCTGCCGTCAGCGCTGCGGCGG
CAGGGATGGGGCTGGGGCTGGGGCAGCCCCATGCCTCGAGCTGGGAGGGG
GCCGGGCCAGAGGCGGAGGAGGAAGAGGCGGCTGCGGTGGCGGCTGCCGC
TGCCGCCGCCACCACCGCAGCCGCAGGCACCACCCTGCCCCCCGGGGGTA
GTAGTCGC back to top
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