mRNA_S-ischiensis_contig85.20171.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig85.20171.1
Unique NamemRNA_S-ischiensis_contig85.20171.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A0A835ZEG9_9STRA (Anticodon-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG9_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 4.740e-147
Identity = 204/289 (70.59%), Postives = 247/289 (85.47%), Query Frame = -1
Query:   73 MYVRRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIEDCGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNKG-AKEIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 936
            M VRRQVRLRKEYLYRK L+G + A YE+K  +R AL +GK LPTE+R EE  LRHE+E+ED+ET K+RS  DDEYA AG +DP+VCVTTSR+PSSRLKQFAKE+KL+VPNAQRINRGN+KV  L++A R N+FTD+VV+QETRGEPDGLLVCHLPLGPTAYFT+SNCVLRHDI + G MSE YPH+I + F T LG R A+ILKYLFP+PK +SKR +TF+ND D + FRHH ++ KG +KE+ L EVGPRF+++LYQI+LGT+DQLEA+NEWVLRPYMNSAK+RR+L
Sbjct:    1 MSVRRQVRLRKEYLYRKGLEGNERAQYEKKALIRRALADGKALPTEVRGEEEALRHEIELEDDETAKVRSHADDEYAQAGHRDPRVCVTTSREPSSRLKQFAKELKLIVPNAQRINRGNYKVSGLIDAARQNDFTDVVVVQETRGEPDGLLVCHLPLGPTAYFTLSNCVLRHDIPNRGTMSEAYPHMILHGFSTALGARTADILKYLFPVPKPESKRAITFANDSDFISFRHHVWERKGGSKEVTLKEVGPRFEMQLYQIKLGTVDQLEADNEWVLRPYMNSAKRRRYL 289          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A0A1Y1I9H7_KLENI (IMP4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9H7_KLENI)

HSP 1 Score: 394 bits (1011), Expect = 1.480e-134
Identity = 192/290 (66.21%), Postives = 237/290 (81.72%), Query Frame = -1
Query:   73 VRRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIED---CGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDN-KGAKEIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 930
            +RR  RLR+EYLYRKSL+GK+ AVYERK+++REAL EGKP+PTELR+EEA LR E+E+ED+ T + R+ +DDEYA AG +DPK+ +TTSRDPSSRL QF KE+K+V PNAQRINRG   +  +VEACRSN+FTDIV++ E RGEPDGL+VCHLP GPTAYF +SN V RHDI+D    G MSE +PHLI NNF T LG R  NILK+LFP+PK +SKR++TF+N  D + FRHH Y+  KGAK + L EVGPRF+L+LYQ++LGTMDQ EAE+EWV+RPYMNSA+KR  L
Sbjct:    2 LRRNARLRREYLYRKSLEGKERAVYERKRKIREALAEGKPIPTELRNEEAALRQEIELEDDVTAEQRTHIDDEYARAGERDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISQIVEACRSNDFTDIVMVHEHRGEPDGLVVCHLPFGPTAYFGLSNVVTRHDIKDRAAVGTMSEAFPHLILNNFNTKLGLRTQNILKFLFPVPKDESKRIITFANQSDYISFRHHIYEKPKGAKSVELKEVGPRFELRLYQVKLGTMDQSEAEDEWVIRPYMNSARKRTAL 291          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: D7FW56_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW56_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.760e-134
Identity = 181/231 (78.35%), Postives = 217/231 (93.94%), Query Frame = -1
Query:   73 VEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIEDCGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNKGAKEIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 765
            VE+ED+ET KL+S +DDEYA AG++DPKVCVTTSRDPSSRLKQFAKE+KLVVPNAQRINRGNHKVG+LV ACRS+EFTD++V+QETRGEPDGL+VCHLPLGPTA+FT+SNCVLRHDI D G +SEVYPHLIF+ F T LG+RVA++LKYLFP+PKADS+RVMTFSN+ED ++FRHH Y+ +G KE+VLHEVGPRF+++LYQ+RLGT+DQ+EAENEWV+RPYMNS+KKRRFL
Sbjct:   56 VELEDDETCKLKSSIDDEYAQAGIRDPKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQETRGEPDGLIVCHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIFDKFSTPLGQRVADVLKYLFPVPKADSRRVMTFSNEEDVLYFRHHMYEKRGGKEMVLHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPYMNSSKKRRFL 286          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A0A4D9D6I8_9STRA (Brix domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I8_9STRA)

HSP 1 Score: 392 bits (1006), Expect = 8.500e-134
Identity = 189/288 (65.62%), Postives = 238/288 (82.64%), Query Frame = -1
Query:   73 VRRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIEDCGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNK-GAK-EIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 930
            +RRQ RLRKEYLYRKSL+GK+ A YERKQQ+R AL+EGKP+PTELR EE   RHE+ +ED+ T +  + +DDEY  AG +DPKVCVTTSRDPSSRLKQF KE+KL+ PNAQ +NRGN KV +LVEACR+++FTDIVV+QETRG+PDGLLVCHLPLGPTAYFT+SN V+RHDIED   +SE YPHLI   F + LG+RVA+ILK+ FP P+  S+RV+TF+N++D + FRHHT++   G K E+ L E+GPRFDL ++Q++LGT++Q +AE E+V RPYMN+AKKRR L
Sbjct:    4 IRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVLELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDRIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRML 291          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A0A8K1FM74_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM74_PYTOL)

HSP 1 Score: 402 bits (1033), Expect = 7.870e-133
Identity = 192/288 (66.67%), Postives = 241/288 (83.68%), Query Frame = -1
Query:   73 MYVRRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIEDCGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNKGAKEIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 936
            M VRR VRLR+EYLYRK L+GK+ A+YERK Q++EA+R GKP+PTELR +E TLRHE+E +DE  +K  + +DDEY  AG+ DPK+ +TTSRDPSSRLKQFA+E++L+ PNA R+NRG H +GDLV++ R+N+++D+V++ ETRGEPDGL+VCHLP GPTAYF+++N VLRHDIED   +SE YPHLI NNFET LGKRV+NILK+LFP+PKADSKRV+T SND D + FRHH +   G +E+ L E GPRF+L+LYQ++LGT DQ EAENEWVLRPYMNSAKKRR L
Sbjct:  365 MSVRRNVRLRREYLYRKGLEGKERALYERKTQLKEAIRSGKPIPTELRGQEGTLRHEMEYDDEVHEKPMNHIDDEYKNAGMFDPKIAITTSRDPSSRLKQFAQEVRLIFPNAIRLNRGAHTIGDLVDSARANDYSDLVIVTETRGEPDGLVVCHLPYGPTAYFSLNNAVLRHDIEDRAKVSEAYPHLIMNNFETTLGKRVSNILKHLFPVPKADSKRVITLSNDNDFISFRHHVFKKTG-REVELQECGPRFELQLYQVKLGTCDQKEAENEWVLRPYMNSAKKRRVL 651          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A0A0D6R0Z1_ARACU (Brix domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R0Z1_ARACU)

HSP 1 Score: 389 bits (998), Expect = 1.500e-132
Identity = 185/290 (63.79%), Postives = 238/290 (82.07%), Query Frame = -1
Query:   73 VRRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIED---CGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNKGA-KEIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 930
            +RR VRLR+EYLYRKSL+GK+  +YE+K+++R+AL EGKP+PTELR+EE  LR E++ ED++T  L++ +DDEYA A  +DPK+ +TTSRDPSSRL QF KE+K+V PNAQRINRGN  + ++VEACRS+EFTDIV++ E RGEPDGL+VCHLP GP+AYF + N V RHDI+D    G MSE YPHLI +NF T LG+R ANILKYLFP+PK D+KR++TF+N  D + FRHH Y+  G  K I L EVGPRF+L+LYQI+LGT+DQ+EA+NEWV+RPYMN+ KK++FL
Sbjct:    2 LRRNVRLRREYLYRKSLEGKERLLYEKKRKIRQALEEGKPIPTELRNEEEALRREIDHEDDQTAVLKTHIDDEYANAAERDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGNQVIAEIVEACRSHEFTDIVMVHEHRGEPDGLIVCHLPFGPSAYFGLHNVVTRHDIKDKQAVGTMSEAYPHLILHNFSTKLGERTANILKYLFPVPKPDTKRIITFANQSDYISFRHHVYEKPGGPKSIELKEVGPRFELRLYQIKLGTIDQMEAQNEWVIRPYMNTTKKQKFL 291          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A9TVY3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TVY3_PHYPA)

HSP 1 Score: 388 bits (996), Expect = 2.810e-132
Identity = 180/287 (62.72%), Postives = 238/287 (82.93%), Query Frame = -1
Query:   82 VRRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIED---CGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNK-GAKEIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKR 930
            +RR  RLR+EYLYRKSL+GK+  +YE+K+++R+AL EGKP+PTELR+EEA LR E+++ED++TQ+L+S +DDEY+ AG+++PK+ +TTSRDPSSRL QF KE+K+V PNAQRINRG   + ++VE+CR+ E++D++++ E RGEPDGL+VCHLP GPTAYF +SN V RHDI+D    G MSE YPHLIFNNF T LG+R  NILK+LFP+PK D+KR++TF+N  D + FRHH Y+   G K I + EVGPRF+L+LYQ++LGTMDQ EA+NEWV+RPYMNS KKR
Sbjct:    2 LRRNTRLRREYLYRKSLEGKERVLYEKKRKIRQALAEGKPIPTELRNEEAALRQEIDLEDDQTQELKSTIDDEYSNAGIENPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISEIVESCRAQEYSDLIMVHEHRGEPDGLIVCHLPYGPTAYFGLSNVVTRHDIKDKGVLGTMSEQYPHLIFNNFNTKLGQRTVNILKHLFPVPKPDAKRIITFANQSDYISFRHHMYEKPAGVKSIDIKEVGPRFELRLYQVKLGTMDQTEAQNEWVIRPYMNSGKKR 288          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A0A448YZ52_9STRA (Brix domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448YZ52_9STRA)

HSP 1 Score: 386 bits (991), Expect = 1.990e-131
Identity = 184/286 (64.34%), Postives = 235/286 (82.17%), Query Frame = -1
Query:   73 RRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIED-CGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNKGAKEIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 927
            RRQ RLR+EYLYRKSL+GK+ A YE+K+ +REAL  GKPLPTE+R+    L+ +++ ED  T   RS +D+EY  AG+ +P+VCVTTSRDPSSRLKQF+KE+KL++PN+ RINRGN++V +L+E+CR +EFTD+VV+QETRGEPDGL+VCHLPLGPTAYF+++N V+RHD++    PMSE YPH+I NNF + LGKRV NILK LFP+P+ D+KRV+TFSND D + FRHH Y       + LHEVGPRF+L+LYQIRLGTMDQ EA+NE+VLRPY N+AKKR+ L
Sbjct:   11 RRQTRLRREYLYRKSLEGKEKAAYEQKRVIREALASGKPLPTEVRASYDKLQKQIDAEDITTDTPRSHIDNEYGDAGLLEPRVCVTTSRDPSSRLKQFSKEVKLLIPNSTRINRGNNRVDELIESCRQSEFTDVVVVQETRGEPDGLVVCHLPLGPTAYFSINNAVMRHDLDPPAAPMSEAYPHIILNNFHSELGKRVGNILKCLFPVPRPDTKRVVTFSNDNDFISFRHHMYSKPTHDSVTLHEVGPRFELRLYQIRLGTMDQKEADNEYVLRPYQNTAKKRKML 296          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A0A196SBD6_BLAHN (U3 small nucleolar ribonucleoprotein IMP4 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SBD6_BLAHN)

HSP 1 Score: 385 bits (990), Expect = 2.210e-131
Identity = 183/286 (63.99%), Postives = 234/286 (81.82%), Query Frame = -1
Query:   73 VRRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIEDCGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNKGAKEIVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 930
            +RR +RLRKEYLYRKSL+GK    YE+KQ++R+AL  GK +PTELR E   L+H V+MED++T++L++  DDEYATAG++DPKVCVTTSRDPSSRLK F KE+KL++PN+QR+NRG  K+ +LV+ACR+N+FTDIV++ E RGEP  L+VCHLP GPTAYF +SN V+RHDIE+ G MSE YPHLIF+N  + LG+R+ NILK++FP+P+ DSKRV+TF+N  D + FRHHTY  +  K I L EVGPRF+L+ YQIRLGT+DQ EAENEWVL  Y NS+KKR+ L
Sbjct:    2 LRRDIRLRKEYLYRKSLEGKQKEEYEKKQKIRDALASGKKVPTELRYEAEKLKHVVDMEDDKTKELKTHADDEYATAGIEDPKVCVTTSRDPSSRLKMFIKEIKLIIPNSQRVNRGASKLDELVKACRANDFTDIVIVNEHRGEPTSLIVCHLPYGPTAYFNISNTVMRHDIENVGTMSEAYPHLIFSNLTSKLGERITNILKHIFPVPRVDSKRVLTFANQGDFISFRHHTYTREDHKTISLTEVGPRFELRPYQIRLGTVDQDEAENEWVLHQYTNSSKKRKLL 287          
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Match: A0A2R5GWV0_9STRA (U3 small nucleolar ribonucleoprotein protein IMP4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWV0_9STRA)

HSP 1 Score: 385 bits (990), Expect = 2.630e-131
Identity = 185/295 (62.71%), Postives = 236/295 (80.00%), Query Frame = -1
Query:   73 MYVRRQVRLRKEYLYRKSLQGKDAAVYERKQQVREALREGKPLPTELRSEEATLRHEVEMEDEETQKLRSLMDDEYATAGVQDPKVCVTTSRDPSSRLKQFAKEMKLVVPNAQRINRGNHKVGDLVEACRSNEFTDIVVLQETRGEPDGLLVCHLPLGPTAYFTMSNCVLRHDIEDCGPMSEVYPHLIFNNFETGLGKRVANILKYLFPMPKADSKRVMTFSNDEDSVFFRHHTYDNKGAKE-------IVLHEVGPRFDLKLYQIRLGTMDQLEAENEWVLRPYMNSAKKRRFL 936
            M +R+ +R+RKEY+YRKSL+GKD   YE+K+Q+REAL  GKP+PTELR E+  LR E++ +DE T K ++ MDDEYA AGV+DPK+CVTTS DPSSRLKQFAKE++L+ PN+QRINRGN K+ +LV+ CRSN+FTDIV++QE RGEPD L+VCHLP GPTA F+++N V+RHDIEDCG MSE YPHLIF+NF T LG+RV+NILKYLFP+PK +S RV+TFSN+ D + FRHHT+   G +        + L EVGPRF+++L+QI+LGT+D   AE EWV   Y N+AKKRR L
Sbjct:    1 MSLRKHIRMRKEYIYRKSLEGKDKEQYEKKRQIREALAAGKPIPTELRDEQGKLRQELDRDDEFTIKPKTHMDDEYANAGVRDPKICVTTSSDPSSRLKQFAKEVRLMFPNSQRINRGNVKLAELVDTCRSNDFTDIVIVQEHRGEPDALVVCHLPYGPTATFSLTNAVMRHDIEDCGTMSEAYPHLIFDNFNTALGERVSNILKYLFPVPKPESTRVLTFSNNRDFISFRHHTFKKLGGESNTVDKEHVELSEVGPRFEMQLFQIKLGTVDDRNAEMEWVRHTYTNTAKKRRLL 295          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEG9_9STRA4.740e-14770.59Anticodon-binding protein n=1 Tax=Tribonema minus ... [more]
A0A1Y1I9H7_KLENI1.480e-13466.21IMP4 n=1 Tax=Klebsormidium nitens TaxID=105231 Rep... [more]
D7FW56_ECTSI1.760e-13478.35Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A4D9D6I8_9STRA8.500e-13465.63Brix domain-containing protein n=2 Tax=Monodopsida... [more]
A0A8K1FM74_PYTOL7.870e-13366.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0D6R0Z1_ARACU1.500e-13263.79Brix domain-containing protein n=1 Tax=Araucaria c... [more]
A9TVY3_PHYPA2.810e-13262.72Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A448YZ52_9STRA1.990e-13164.34Brix domain-containing protein n=2 Tax=Bacillariac... [more]
A0A196SBD6_BLAHN2.210e-13163.99U3 small nucleolar ribonucleoprotein IMP4 n=1 Tax=... [more]
A0A2R5GWV0_9STRA2.630e-13162.71U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:576774..577823 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1052
Cds size1050
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817344.512014-CDS-S-ischiensis_contig85:576773..5778231622817344.512014-CDS-S-ischiensis_contig85:576773..577823Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 576774..577823 +
1695741043.472016-CDS-S-ischiensis_contig85:576773..5778231695741043.472016-CDS-S-ischiensis_contig85:576773..577823Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 576774..577823 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20171.1prot_S-ischiensis_contig85.20171.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig85 576774..577823 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig85.20171.1

>prot_S-ischiensis_contig85.20171.1 ID=prot_S-ischiensis_contig85.20171.1|Name=mRNA_S-ischiensis_contig85.20171.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=350bp
MRNILGHGIPTRILVTVSQLQLKLQEPTLLCRVHIRPQHPLILSLQLVHG
AEADLIQLQVKPRPHLMQHNLLGTLVIICVVPKEHRVLVIGERHDALGVC
FWHGEQVLEYVRHALPQTCLKVVENEVRVHFAHWPTVLNIMPQYTVGHGK
VCRRPERQMAHEQSVWLAASLLKDDNVCELIRPARLYQIPDLVVAPVDPL
RVWYHELHLLGELLKTAGWVSARRDANLRVLDARRRVLVVHEAPQLLSLF
ILHFHLVPQCCFLAPELRRQGFPFPQGLPHLLLPFVHRRIFALQRLAVQV
LLAEADLASHIHCAVSNNRTNTGRGAGHVTKDRNSGPSLAPLARLRAACV
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mRNA from alignment at S-ischiensis_contig85:576774..577823+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig85.20171.1 ID=mRNA_S-ischiensis_contig85.20171.1|Name=mRNA_S-ischiensis_contig85.20171.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1050bp|location=Sequence derived from alignment at S-ischiensis_contig85:576774..577823+ (Schizocladia ischiensis KU_0333)
ATGAGAAATATCCTGGGGCATGGAATTCCCACGAGGATTCTTGTAACTGT TTCACAACTACAATTAAAATTACAGGAACCTACGCTTCTTTGCAGAGTTC ATATACGGCCGCAGCACCCACTCATTCTCAGCCTCCAACTGGTCCATGGT GCCGAGGCGGATCTGATACAACTTCAAGTCAAACCGCGGCCCCACCTCAT GCAGCACAATCTCCTTGGCACCCTTGTTATCATATGTGTGGTGCCTAAAG AACACAGAGTCCTCGTCATTGGAGAACGTCATGACGCGCTTGGAGTCTGC TTTTGGCATGGGGAACAGGTACTTGAGTATGTTCGCCACGCGCTTCCCCA GACCTGTCTCAAAGTTGTTGAAAATGAGGTGCGGGTACACTTCGCTCATT GGCCCACAGTCCTCAATATCATGCCGCAATACACAGTTGGACATGGTAAA GTATGCCGTCGGCCCGAGCGGCAGATGGCACACGAGCAGTCCGTCTGGCT CGCCGCGAGTCTCCTGAAGGACGACAATGTCTGTGAACTCATTCGACCGG CACGCCTCTACCAGATCCCCGACCTTGTGGTTGCCCCGGTTGATCCGCTG CGCGTTTGGTACCACGAGCTTCATCTCCTTGGCGAACTGCTTAAGACGGC TGGATGGGTCTCTGCTCGTCGTGACGCAAACCTTCGGGTCTTGGACGCCC GCCGTCGCGTACTCGTCGTCCATGAGGCTCCGCAACTTCTGAGTCTCTTC ATCCTCCATTTCCACCTCGTGCCGCAGTGTTGCTTCCTCGCTCCTGAGCT CCGTCGGCAGGGGTTTCCCTTCCCGCAGGGCCTCCCGCACTTGCTGCTTC CTTTCGTACACCGCCGCATCTTTGCCTTGCAGCGACTTGCGGTACAGGTA CTCCTTGCGGAGGCGGACCTGGCGTCGCACATACATTGCGCCGTCAGTAA TAACAGGACCAACACAGGGCGAGGCGCAGGCCACGTCACTAAAGACCGCA ACAGTGGCCCTTCCTTAGCTCCCTTGGCGAGGCTGCGGGCGGCGTGTGTG
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Coding sequence (CDS) from alignment at S-ischiensis_contig85:576774..577823+

>mRNA_S-ischiensis_contig85.20171.1 ID=mRNA_S-ischiensis_contig85.20171.1|Name=mRNA_S-ischiensis_contig85.20171.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2100bp|location=Sequence derived from alignment at S-ischiensis_contig85:576774..577823+ (Schizocladia ischiensis KU_0333)
ATGAGAAATATCCTGGGGCATGGAATTCCCACGAGGATTCTTGTAACTGT
TTCACAACTACAATTAAAATTACAGGAACCTACGCTTCTTTGCAGAGTTC
ATATACGGCCGCAGCACCCACTCATTCTCAGCCTCCAACTGGTCCATGGT
GCCGAGGCGGATCTGATACAACTTCAAGTCAAACCGCGGCCCCACCTCAT
GCAGCACAATCTCCTTGGCACCCTTGTTATCATATGTGTGGTGCCTAAAG
AACACAGAGTCCTCGTCATTGGAGAACGTCATGACGCGCTTGGAGTCTGC
TTTTGGCATGGGGAACAGGTACTTGAGTATGTTCGCCACGCGCTTCCCCA
GACCTGTCTCAAAGTTGTTGAAAATGAGGTGCGGGTACACTTCGCTCATT
GGCCCACAGTCCTCAATATCATGCCGCAATACACAGTTGGACATGGTAAA
GTATGCCGTCGGCCCGAGCGGCAGATGGCACACGAGCAGTCCGTCTGGCT
CGCCGCGAGTCTCCTGAAGGACGACAATGTCTGTGAACTCATTCGACCGG
CACGCCTCTACCAGATCCCCGACCTTGTGGTTGCCCCGGTTGATCCGCTG
CGCGTTTGGTACCACGAGCTTCATCTCCTTGGCGAACTGCTTAAGACGGC
TGGATGGGTCTCTGCTCGTCGTGACGCAAACCTTCGGGTCTTGGACGCCC
GCCGTCGCGTACTCGTCGTCCATGAGGCTCCGCAACTTCTGAGTCTCTTC
ATCCTCCATTTCCACCTCGTGCCGCAGTGTTGCTTCCTCGCTCCTGAGCT
CCGTCGGCAGGGGTTTCCCTTCCCGCAGGGCCTCCCGCACTTGCTGCTTC
CTTTCGTACACCGCCGCATCTTTGCCTTGCAGCGACTTGCGGTACAGGTA
CTCCTTGCGGAGGCGGACCTGGCGTCGCACATACATTGCGCCGTCAGTAA
TAACAGGACCAACACAGGGCGAGGCGCAGGCCACGTCACTAAAGACCGCA
ACAGTGGCCCTTCCTTAGCTCCCTTGGCGAGGCTGCGGGCGGCGTGTGTG
ATGAGAAATATCCTGGGGCATGGAATTCCCACGAGGATTCTTGTAACTGT
TTCACAACTACAATTAAAATTACAGGAACCTACGCTTCTTTGCAGAGTTC
ATATACGGCCGCAGCACCCACTCATTCTCAGCCTCCAACTGGTCCATGGT
GCCGAGGCGGATCTGATACAACTTCAAGTCAAACCGCGGCCCCACCTCAT
GCAGCACAATCTCCTTGGCACCCTTGTTATCATATGTGTGGTGCCTAAAG
AACACAGAGTCCTCGTCATTGGAGAACGTCATGACGCGCTTGGAGTCTGC
TTTTGGCATGGGGAACAGGTACTTGAGTATGTTCGCCACGCGCTTCCCCA
GACCTGTCTCAAAGTTGTTGAAAATGAGGTGCGGGTACACTTCGCTCATT
GGCCCACAGTCCTCAATATCATGCCGCAATACACAGTTGGACATGGTAAA
GTATGCCGTCGGCCCGAGCGGCAGATGGCACACGAGCAGTCCGTCTGGCT
CGCCGCGAGTCTCCTGAAGGACGACAATGTCTGTGAACTCATTCGACCGG
CACGCCTCTACCAGATCCCCGACCTTGTGGTTGCCCCGGTTGATCCGCTG
CGCGTTTGGTACCACGAGCTTCATCTCCTTGGCGAACTGCTTAAGACGGC
TGGATGGGTCTCTGCTCGTCGTGACGCAAACCTTCGGGTCTTGGACGCCC
GCCGTCGCGTACTCGTCGTCCATGAGGCTCCGCAACTTCTGAGTCTCTTC
ATCCTCCATTTCCACCTCGTGCCGCAGTGTTGCTTCCTCGCTCCTGAGCT
CCGTCGGCAGGGGTTTCCCTTCCCGCAGGGCCTCCCGCACTTGCTGCTTC
CTTTCGTACACCGCCGCATCTTTGCCTTGCAGCGACTTGCGGTACAGGTA
CTCCTTGCGGAGGCGGACCTGGCGTCGCACATACATTGCGCCGTCAGTAA
TAACAGGACCAACACAGGGCGAGGCGCAGGCCACGTCACTAAAGACCGCA
ACAGTGGCCCTTCCTTAGCTCCCTTGGCGAGGCTGCGGGCGGCGTGTGTG
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