mRNA_S-ischiensis_contig85.20164.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A0A0RTZ6_SACJA (Phosphomannomutase n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A0RTZ6_SACJA) HSP 1 Score: 421 bits (1081), Expect = 9.330e-143 Identity = 197/246 (80.08%), Postives = 225/246 (91.46%), Query Frame = 3
Query: 39 KNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELFF 776
KNPRI+ALFDVDGTLTAARK +LPDM +FI LRE+ITIGVVGGSDL KQKEQLGESVMED+DYSFS+NGLVAYKAG LIG+ TI++H+GE+N+K I+NWV+ Y+S +DIPVKRGTFIEFRTGM+NISPVGRNCSQEERDAFEQYDNVHKIR TMV AMR+EF +LNLTFSIGGQISFDLFPTGWDKT+CL++LGE +E+DEIHFFGDKTF+GGND EIFE T+GHTVT+P DT+ QCKELFF
Sbjct: 5 KNPRIIALFDVDGTLTAARKEVLPDMVEFIKTLRERITIGVVGGSDLPKQKEQLGESVMEDYDYSFSQNGLVAYKAGELIGQQTISKHVGEENLKKIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQEERDAFEQYDNVHKIRETMVAAMREEFADLNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTAEYDEIHFFGDKTFKGGNDNEIFESERTIGHTVTSPADTIQQCKELFF 250
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A835Z1B0_9STRA (Phosphomannomutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B0_9STRA) HSP 1 Score: 381 bits (978), Expect = 3.300e-127 Identity = 181/250 (72.40%), Postives = 209/250 (83.60%), Query Frame = 3
Query: 30 MAPKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELFFS 779
MA NPRILALFDVDGTLT R I+P+M+ FIA LR +IT+GVVGGSDL KQ EQLG VM+ +D++FSENGLVAYK G IG+T+I HLGE+N+K IVNWV+ YLSKVDIP+KRGTFIEFRTGM+NISP+GRNCS ERD FE+YD HK+RATMV+AM+ EFG+L LTFSIGGQISFDLFPTGWDKTYCLRYL E +FDEIHFFGDKTF+GGNDYEI+ HP GH+V + DTM QC +LFFS
Sbjct: 1 MAKTNPRILALFDVDGTLTEPRLAIVPEMRTFIARLRREITVGVVGGSDLKKQMEQLGRDVMDCYDWNFSENGLVAYKDGVPIGRTSITDHLGEENLKRIVNWVLGYLSKVDIPIKRGTFIEFRTGMLNISPIGRNCSHAERDEFEKYDLEHKVRATMVKAMQDEFGDLGLTFSIGGQISFDLFPTGWDKTYCLRYLPE--GDFDEIHFFGDKTFKGGNDYEIYTHPRIKGHSVKSFSDTMEQCTQLFFS 248
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A7R9UAJ4_9STRA (Phosphomannomutase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAJ4_9STRA) HSP 1 Score: 379 bits (973), Expect = 7.010e-125 Identity = 176/248 (70.97%), Postives = 215/248 (86.69%), Query Frame = 3
Query: 33 APKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEF-GELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELF 773
A NPR+L LFDVDGTLT ARKT+ P+M+ ++A+LR+++T+GV+GGSD VKQKEQLG++V+EDFD+SFSENGLVAYKAG L+ K ++AQHLGE IK IVNWVM Y+ K+D PVKRGTFIEFRTGM NISPVGRNCS+EER+ FE YD+VHKIR TMV+AMR EF G+ +LT+SIGGQISFD+FPTGWDKTYCLR++ D+ +FDE+HFFGDKT++GGNDYEIF HP TVGH+V PEDT+ Q K +F
Sbjct: 107 AKTNPRVLVLFDVDGTLTPARKTMGPEMRAYLAKLRQKVTVGVIGGSDFVKQKEQLGDTVLEDFDFSFSENGLVAYKAGELLAKASVAQHLGEPAIKDIVNWVMGYMCKIDCPVKRGTFIEFRTGMFNISPVGRNCSREERNDFEAYDDVHKIRETMVKAMRAEFQGKYDLTYSIGGQISFDVFPTGWDKTYCLRFV--DEKDFDEVHFFGDKTYKGGNDYEIFMHPRTVGHSVRNPEDTLRQLKAIF 352
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A7S1Y4G5_9STRA (Phosphomannomutase n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y4G5_9STRA) HSP 1 Score: 370 bits (951), Expect = 3.690e-123 Identity = 174/250 (69.60%), Postives = 206/250 (82.40%), Query Frame = 3
Query: 30 MAPKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELFFS 779
MAP NPRI+ALFDVDGTLT R + PDM +F+ L E+IT+G+VGGSDL KQ+EQLGE + + F Y+FS+NGLVAYK G L+ TI++HLGEDNIK IVNW + YLS VDIPVKRGTFIEFR+GMMNISP+GRNCS+ ER+ +E++D H IR MVEAM+KEF ELNLTFSIGGQISFD+FPTGWDKTYCL++L E +FDE+HFFGDKTFEGGNDYEIF T+GHTVT+P+DT QC ELF S
Sbjct: 1 MAPANPRIIALFDVDGTLTVPRGEVTPDMMEFMKNLSEKITVGIVGGSDLPKQEEQLGEGIAKVFPYNFSQNGLVAYKNGELLEIQTISKHLGEDNIKRIVNWTLKYLSDVDIPVKRGTFIEFRSGMMNISPIGRNCSRPERNDYEKFDLEHNIRKNMVEAMKKEFAELNLTFSIGGQISFDVFPTGWDKTYCLKFLAE--GDFDEVHFFGDKTFEGGNDYEIFTSDRTIGHTVTSPDDTKKQCTELFMS 248
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A6V1Q7K0_HETAK (Phosphomannomutase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q7K0_HETAK) HSP 1 Score: 365 bits (938), Expect = 1.420e-120 Identity = 165/248 (66.53%), Postives = 209/248 (84.27%), Query Frame = 3
Query: 30 MAPKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELF 773
M+ +NPRILALFDVDGT+TAARKTI P+M+ F L +I++GVVGGSDL KQKEQLG+ V+ ++DYSFSENGL+A+K G IG+T I+ HLGEDN+K ++NWV+ Y + +D+P+KRGTFIEFRTGM+N+SP+GR+CS+EER+AFE++D + +RA MVE MR+EF +L L FSIGGQISFD+FP GWDKTYCLRYL E +++DEIHFFGDKT +GGNDYEIFE T+GHTVT+P+DT AQC LF
Sbjct: 24 MSSRNPRILALFDVDGTMTAARKTITPEMRNFFRALNTKISVGVVGGSDLAKQKEQLGDDVVTEYDYSFSENGLIAFKDGEEIGRTAISDHLGEDNLKRVINWVLRYFADLDVPIKRGTFIEFRTGMLNVSPIGRDCSREERNAFEEFDLANGVRAAMVERMREEFADLGLQFSIGGQISFDVFPQGWDKTYCLRYLPE--TDYDEIHFFGDKTMKGGNDYEIFEAERTIGHTVTSPDDTKAQCMALF 269
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A7S2N171_9STRA (Phosphomannomutase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N171_9STRA) HSP 1 Score: 361 bits (926), Expect = 3.580e-119 Identity = 170/249 (68.27%), Postives = 207/249 (83.13%), Query Frame = 3
Query: 27 TMAPKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELF 773
T P+ PR +ALFDVDGTLT R I P+M F+ EL ++IT+G+VGGSDL KQ+EQLG+ V++ F Y+FS+NGLVAYK G L+ TI++ LGEDNIK IVNWVM YL++VDIPVKRGTFIEFR+GMMNISPVGRNCS+EER+ +E++D H IR MVEAM+KEF +LNLT+SIGGQISFD+FPTGWDKTYCL+++ K +FDE+HFFGDKTFEGGND+EIF H TVGHTVT+P+DT QC ELF
Sbjct: 15 TAGPEKPRTIALFDVDGTLTIPRGEITPEMLAFMKELSQKITVGIVGGSDLPKQEEQLGQGVVKLFPYNFSQNGLVAYKDGELMEVQTISKFLGEDNIKKIVNWVMKYLAEVDIPVKRGTFIEFRSGMMNISPVGRNCSREERNDYEKFDLEHNIRKNMVEAMKKEFADLNLTYSIGGQISFDVFPTGWDKTYCLQFIK--KEDFDEVHFFGDKTFEGGNDFEIFSHERTVGHTVTSPDDTKEQCTELF 261
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A7S4NE94_9STRA (Phosphomannomutase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NE94_9STRA) HSP 1 Score: 359 bits (922), Expect = 1.970e-118 Identity = 167/253 (66.01%), Postives = 208/253 (82.21%), Query Frame = 3
Query: 21 KSTMAPKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELFFS 779
K+ P+NPRI+ALFDVDGTLT R I P M +F+ EL ++IT+G+VGGSDL KQ+EQLG+ V++ F Y+FS+NGLVAYK G ++ TI++HLGEDNIK IVNW M YL+ VD+PVKRGTFIEFR+GMMNISPVGRNCS+EER+ +E++D + +R MV AM+KEF +LNLTFSIGGQISFD+FP GWDKTYCL+++ E+ +FDE+HFFGDKTFEGGNDYEIF H T GHTVT+P+DT QC +LF S
Sbjct: 21 KTMTTPENPRIIALFDVDGTLTIPRGEITPSMMEFMLELSKKITVGIVGGSDLPKQEEQLGDGVVKMFPYNFSQNGLVAYKDGEILEIQTISKHLGEDNIKRIVNWTMKYLADVDVPVKRGTFIEFRSGMMNISPVGRNCSREERNDYEKFDLANNVRKNMVAAMQKEFADLNLTFSIGGQISFDVFPNGWDKTYCLQFIKEE--DFDEVHFFGDKTFEGGNDYEIFTHERTKGHTVTSPDDTKEQCTKLFMS 271
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A6U1NX74_CYCTE (Phosphomannomutase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1NX74_CYCTE) HSP 1 Score: 357 bits (916), Expect = 8.140e-118 Identity = 165/246 (67.07%), Postives = 203/246 (82.52%), Query Frame = 3
Query: 36 PKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELF 773
P+ PRI+ALFDVDGTLT R + M +F+ L ++IT+G+VGGSDL KQ+EQLG ++ F Y+FS+NGLVAYK G L+ + TIA+ LGEDN+K IVNWVM YL+ +DIPVKRGTFIEFR+GM NISP+GRNCS+ ER+ +E++D H IR TMVEAM+KEF +LNLTFSIGGQISFD+FP+GWDKTYCL++L D EFDE+HFFGDKTFEGGNDYEIF H T+GHTVT+PEDT QC++LF
Sbjct: 7 PEQPRIIALFDVDGTLTVPRGEVTETMMEFLKTLSKKITVGIVGGSDLPKQEEQLGSGIVNLFPYNFSQNGLVAYKDGELLERQTIAKFLGEDNVKRIVNWVMKYLADIDIPVKRGTFIEFRSGMFNISPIGRNCSRPERNEYEKFDLEHGIRKTMVEAMKKEFADLNLTFSIGGQISFDVFPSGWDKTYCLKFLNPD--EFDEVHFFGDKTFEGGNDYEIFNHDRTIGHTVTSPEDTKEQCQKLF 250
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: B8BZK1_THAPS (Phosphomannomutase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZK1_THAPS) HSP 1 Score: 357 bits (915), Expect = 1.040e-117 Identity = 171/248 (68.95%), Postives = 202/248 (81.45%), Query Frame = 3
Query: 36 PKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELFFS 779
P NPRI+ALFDVDGTLT R + +M F+ L E+IT+G+VGGSDL KQ+EQLGE + + F Y+FS+NGLVAYK G L TIA+ LGEDNIK IVNW + YL+ VDIPVKRGTFIEFR+GMMNISP+GRNCS+EER+ +E+ D IR MVEAMRKEF +LNLT+SIGGQISFD+FPTGWDKTYCL+YL D ++FDEIHFFGDKTFEGGNDYEIFE T+GHTVT+PEDT QC++LF S
Sbjct: 4 PANPRIIALFDVDGTLTIPRGEVTEEMMAFMHRLSEKITVGIVGGSDLPKQEEQLGEGIAKVFPYNFSQNGLVAYKNGELQEVQTIAKFLGEDNIKKIVNWTLKYLADVDIPVKRGTFIEFRSGMMNISPIGRNCSREERNDYEKIDLERNIRKNMVEAMRKEFADLNLTYSIGGQISFDVFPTGWDKTYCLKYL--DAADFDEIHFFGDKTFEGGNDYEIFESERTIGHTVTSPEDTREQCEKLFMS 249
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Match: A0A7S4A6V5_9STRA (Phosphomannomutase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6V5_9STRA) HSP 1 Score: 356 bits (914), Expect = 7.800e-117 Identity = 165/248 (66.53%), Postives = 203/248 (81.85%), Query Frame = 3
Query: 36 PKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLVKQKEQLGESVMEDFDYSFSENGLVAYKAGALIGKTTIAQHLGEDNIKTIVNWVMAYLSKVDIPVKRGTFIEFRTGMMNISPVGRNCSQEERDAFEQYDNVHKIRATMVEAMRKEFGELNLTFSIGGQISFDLFPTGWDKTYCLRYLGEDKSEFDEIHFFGDKTFEGGNDYEIFEHPGTVGHTVTAPEDTMAQCKELFFS 779
P R LALFDVDGTLT AR I P+MK F+ ELR+ I+IGVVGGSD VKQ+EQ+G + +FDYSF+ENGLVAYK LI K + AQ +GE+ ++ ++NWV+AYLSK+ +P+KRGTFIEFRTGM+NISP+GRNC+++ER+AFE+YD + IR MV AM+KEF LNLTFSIGGQISFD+FP GWDKTYCL+++ D+S FDE+HFFGDKTFEGGNDYEIF HP GH+VT+P+DT AQC ELF S
Sbjct: 52 PATKRTLALFDVDGTLTPARLKITPEMKAFLQELRKTISIGVVGGSDFVKQQEQIGSDSLSNFDYSFAENGLVAYKNDELIAKASFAQKIGEEELQKLINWVLAYLSKITLPIKRGTFIEFRTGMLNISPIGRNCARDERNAFEEYDLKNNIRKDMVAAMQKEFAHLNLTFSIGGQISFDVFPAGWDKTYCLQFV--DRSLFDEVHFFGDKTFEGGNDYEIFTHPDVKGHSVTSPDDTKAQCTELFLS 297 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig85.20164.1 >prot_S-ischiensis_contig85.20164.1 ID=prot_S-ischiensis_contig85.20164.1|Name=mRNA_S-ischiensis_contig85.20164.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=252bp MAPKNPRILALFDVDGTLTAARKTILPDMKQFIAELREQITIGVVGGSDLback to top mRNA from alignment at S-ischiensis_contig85:529552..535336+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig85.20164.1 ID=mRNA_S-ischiensis_contig85.20164.1|Name=mRNA_S-ischiensis_contig85.20164.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5785bp|location=Sequence derived from alignment at S-ischiensis_contig85:529552..535336+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig85:529552..535336+ >mRNA_S-ischiensis_contig85.20164.1 ID=mRNA_S-ischiensis_contig85.20164.1|Name=mRNA_S-ischiensis_contig85.20164.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1512bp|location=Sequence derived from alignment at S-ischiensis_contig85:529552..535336+ (Schizocladia ischiensis KU_0333)back to top |