mRNA_S-ischiensis_contig85.20162.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: D7FW66_ECTSI (Serine/threonine-prot n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW66_ECTSI) HSP 1 Score: 357 bits (916), Expect = 5.580e-108 Identity = 249/680 (36.62%), Postives = 334/680 (49.12%), Query Frame = 1
Query: 13 SCELKALLEDATTRFQSHHQYRNDERYIQLWVTYADMCRDPSKVFRLLLQRQIGTQLALFWVAWAYAAEASDDYDGAARIYHEAQTRGARPAAVLQECHRAFQERMLQRLQCVA--GKFAELWDP-----------GTLGVQRRRLAGGADNHSTAQQGPGLEEEARKSVSRGXXXXGRIHSALC--------SQDPNTSSVGHSTRGKQTASTGVPPRHGDAVVVVD--------------DPFEDKHRRRFTTGTDDYKRWAQSSSLIHDLRCACLLLLWPRKM-RSGQGAQRSC----SLGKGTVDVLCILGEGAYAQVYACCLRGDHCAEEVAVKVE--RPVVNLPWECFITLQLRDRLRLMAAAEGQASSPNPQSTSPLQVGQRDASPSGAGGSSGPLLGRSERLQVLASSSPLPLAQQTGGMDIQVVRPLGLYVFGDGCCMSMAKGDSGTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYL-VPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLNWQACAGGAYGDKE 1923
S +LK L + RFQ+ +YRNDERY++LW+ YAD+ D KVF LL IGTQL+LFW AWAY E ++ Y+ A I E + GA+P ++ +E R+F ERML+R++ V + +E+ + L ++ + A A Q E E + + G + C ++D N S G + R ++ ++ P R V D +PF RRR TT T Y WA SSS+++D R L + PR+M + G++R SLG ++VL +LGEGA+A V++C D +VAVKVE +LPWECFITLQL +RL L R +R + +P I VV+P L+++ DGC M+M G +GTLH LVA Y+ A +P+LVAMHY EMLR+ RA+HSASILHMDIKPDNWLLV + P S ME A + +SLIDFGR+IDL +P G + F G+C A F CPAM E L WKH+ DLY LG+C++FMLHG YL V R E D + G W P K CKRYW LWD +F +LLN A G+ E
Sbjct: 33 SSDLKEALSEILERFQTDQRYRNDERYLKLWMRYADLSDDADKVFLLLKSEGIGTQLSLFWAAWAYVLEMAEAYERVALIIAEGRAWGAQPVSLFEEFLRSFHERMLERMRMVGLDSRISEVKEEIDLASTRSSEQAMLRAKQSQTAAHAQREHAPDQPNISEREPIEGIENFCTGGGGACGSRCRPVDAPLGARDVN-SHDGAALRRQECSTRNRPDRLPRPRVETDKKATIATAIATLICNPFSPDMRRRLTTNTAQYLCWASSSSIVYDTRLDSLARVCPRRMAKVNVGSRRPVALARSLGNQRINVLGVLGEGAFAVVFSCKFNKDQ--RDVAVKVEYKEDAPSLPWECFITLQLSERL----------------------------------------LHRRQRKVHSVTEAP-----------ITVVKPEALFLYRDGCAMAMPVGLAGTLHDLVAQYSKRAQA--VPQLVAMHYAVEMLRFCRAMHSASILHMDIKPDNWLLV--RRPRSEVDRTEEME------HAGGID-----HSVSLIDFGRAIDLSVFPQNGSDMAFMGQCCAPSFSCPAMREGLAWKHDADLYALGSCMYFMLHGVYLEVSREREDD--------------STLNRSGRWRPVKNCKRYWEVDLWDKIFSELLNSDYRAADTAGNNE 629
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: UPI000D1C2A79 (mitotic checkpoint serine/threonine-protein kinase BUB1 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C2A79) HSP 1 Score: 162 bits (411), Expect = 7.360e-38 Identity = 177/674 (26.26%), Postives = 255/674 (37.83%), Query Frame = 1
Query: 19 ELKALLEDATTRFQSHHQYRNDERYIQLWVTYADMCRDPSKVFRLLLQRQIGTQLALFWVAWAYAAEASDDYDGAARIYHEAQTRGARPAAVLQECHRAFQERMLQ--RLQCVAGKFAELWDP----------GTLGVQR---RRLAGGADNHST-AQQGPGLEEEARKSVSRGXXXXGRIHSAL------------CSQ-------------DPNTSSVGHSTRGKQTASTGVPPRHGDAVVVVDDPFEDKHRRRFTTGTDDY---------KRWAQSSSLIHDLRCACLLLLWPRKMRS--GQGAQRSCSLGKGTVDVLCILGEGAYAQVYACCLRGDHCAEEVAVKVERPVVNLPWECFITLQLRDRLRLMAAAEGQASSPNPQSTSPLQVGQRDASPSGAGGSSGPLLGRSERLQVLASSSPLPLAQQTGGMDIQVVRPLGLYVFGDGCCMSMAKGDSGTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYLVPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLN 1884
EL LLE T F +YR D RY+++W+ YAD C DP +F LL ++IG +LF+ A+A E D A +IY +R A+P L++ H +F +R + R V G F +P T+ +++ + G D + A+ GL E + + L C + D +G+ S G D + VDD F D R R D + K+ A C+ + S ++ LG T + G+GA+AQVY ++ V +K+++P PWE +I QL R + V +RD+ G + ++ YVF D + G GTL +V AY ++ M EL+ M+YT EMLR + LH I+H D KPDN L+ D + AP R P +GL LID+GRSID+ +P E F S F C M E+ PW ++ D YGL +H MLHG+Y+ E DG G H P+ KRYW +WD F+ LLN
Sbjct: 103 ELCPLLEFCTKAFLDDPRYREDLRYLRIWLRYADCCADPLHIFELLEAKRIGQTHSLFYEAYAMILELRGDITKANQIYELGISRHAQPVEQLEKMHASFLKRKFKTSRPSEVKGSFVAAVNPMSNIARPHGDETIAIKKYAEEAIVLGVDPEAANAETHIGLVEPTINTREALVNVLSLFNQPLPLDQVKQPKAPSCQRRELPGAMELNVFVDEAPLEQAKKPQGQDKPSLGAGKM--DFNIFVDDAFCDDRRDRKIEFVDPWDETLVADLLKKLAPPLQTCKGFHCSSKKYSGGVSLSSLKANARNKTVELGNSTYFLKGCTGQGAFAQVYQAHENSNN-ESPVVLKIQKP--PCPWEFYIYYQLDKR---------------------IPVEERDS------------FGSARKM----------------------------YVFSDCSILVAGYGQHGTLQDVVNAYLAHSLK--MDELLCMYYTIEMLRMLEVLHGVGIIHADFKPDNLLIRNESDNWENW-------APNR-------PGCWKGQGLCLIDWGRSIDMRLFP---EGTEFLADSKTSAFRCIEMMEERPWTYQVDGYGLCCIVHCMLHGSYMELE-EERSPDG----------GRVHKPKAS------LKRYWNTNVWDKFFKTLLN 674
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: V9FHN2_PHYPR (BUB protein kinase n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FHN2_PHYPR) HSP 1 Score: 133 bits (334), Expect = 4.160e-28 Identity = 108/367 (29.43%), Postives = 160/367 (43.60%), Query Frame = 1
Query: 811 TVDVLCILGEGAYAQVYACCLRGD--HCAEEVAVKVERPVVNLPWECFITLQLRDRLRLMAAAEGQASSPNPQSTSPLQVGQRDASPSGAGGSSGPLLGRSERLQVLASSSPLPLAQQTGGMDIQVVRPLGLYVFGDGCCMSMAKGDSGTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVE---GLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYLVPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLNWQAC 1896
TV ++ +LG G++A V++ + + AVK+E+ NL WE +IT +++ +LR ++ G D E++ P+P + L++F +G + M KG GTL ++ Y PE++A++Y +MLR + LHSA++LH DIKPDNWL++ PG + L SQ P P V L LID+GRSIDL YP + +FRG C A GF C M PW ++ D + +H ML G Y+ + K GA H W + KRYW +W+N F LLN +C
Sbjct: 552 TVQLVGVLGSGSFAYVFSAKVVDTTINSTRNKAVKIEKERQNLAWEFYITNKIKKKLR-------------------IERGIPD-----------------EKI-------PVPTLTE-------------LHLFSNGALLIMDKGHVGTLFDVLNCY--KQWGTTFPEVLAVYYGIKMLRCIELLHSANVLHGDIKPDNWLMI-----------PGNPSSELEL--ISQEPKPDKVYQAGDLYLIDYGRSIDLSFYP---DGTVFRGSCHAKGFQCVEMLTQRPWTYQIDTFAFCGTMHCMLFGEYMEVKPKRNAK------------GATH-----WGIVRQFKRYWQVDMWENFFHVLLNVHSC 827
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: A0A329SEE5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SEE5_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.920e-28 Identity = 107/364 (29.40%), Postives = 155/364 (42.58%), Query Frame = 1
Query: 811 TVDVLCILGEGAYAQVYACCL--RGDHCAEEVAVKVERPVVNLPWECFITLQLRDRLRLMAAAEGQASSPNPQSTSPLQVGQRDASPSGAGGSSGPLLGRSERLQVLASSSPLPLAQQTGGMDIQVVRPLGLYVFGDGCCMSMAKGDSGTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYLVPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLNWQAC 1896
T+ ++ +LG G++A V++ + + AVK+E+ NL WE +IT +++ ++R+ + LP + I V GL++F +G + M KGD GTL ++ Y PE++A++Y +MLR + LHSA +LH DIKPDNWL++ PSS E P KD L LID+GRSIDL YP E +F+G C A GF C M PW H+ D + +H ML G Y+ + K GA H W K KRYW +W + F LLN ++C
Sbjct: 814 TLQLVGVLGSGSFAYVFSAKVVDTTSNTTCNKAVKIEKERQNLAWEFYITNKIKKKVRI--------------------------------------------------ENKLPDEK------IPVPTFTGLHLFPNGALLIMEKGDFGTLFDVLNCY--KQWGITFPEVLAVYYGIKMLRCIEMLHSAKVLHGDIKPDNWLMIPGN--PSSELSMITQE-PHTDKD-------FHAGDLHLIDYGRSIDLSLYP---EGTVFKGNCHAKGFQCVEMLTHRPWTHQVDTFAFCGTVHCMLFGEYMEVKPRRNAK------------GATH-----WGIVKQFKRYWQVDMWTDFFHNLLNVRSC 1089
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: A0A0A0K5T0_CUCSA (Uncharacterized protein n=5 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0K5T0_CUCSA) HSP 1 Score: 127 bits (320), Expect = 3.820e-27 Identity = 80/229 (34.93%), Postives = 112/229 (48.91%), Query Frame = 1
Query: 1198 LYVFGDGCCMSMAKGDSGTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYLVPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLN 1884
+Y++ D + GTL + +Y V M E++ ++YT EML + LHS I+H D KPDN LL+ + + G + P +GL L+D+GR IDL +P E V F+G C SGF CP M E+ PWK++ D+YGL +H MLHG+Y+ +A DG V++P KRYW LW N+F KLLN
Sbjct: 293 MYLYSDYSILICDYLAHGTLQDAINSYVVLGKT--MEEVLCIYYTIEMLYMLETLHSIDIIHGDFKPDN-LLIRYAGESVTEDG------------FQERHGPWQDQGLCLVDWGRGIDLQLFP---ENVEFKGDCRTSGFRCPEMLENRPWKYQVDIYGLCVVVHTMLHGSYMEVE-KKASSDGDF----------------VYLPKSSFKRYWNIELWKNLFTKLLN 486
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: T0QWJ7_SAPDV (BUB protein kinase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QWJ7_SAPDV) HSP 1 Score: 129 bits (325), Expect = 6.440e-27 Identity = 81/233 (34.76%), Postives = 108/233 (46.35%), Query Frame = 1
Query: 1198 LYVFGDGCCMSMAKGDSGTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYLVPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLNWQAC 1896
L+V+ + + + + GTLH LV YA + A +PE +AM YT +MLR + +H+A LH DIKPDNW+L LR S A LSLIDFGRSIDL YP + F+G C A GF C M PW+H+ D +G+ A HF+L G Y+ T + W + KRYW LW +F +LN +C
Sbjct: 803 LHVYQNATFLCLERSYRGTLHDLVNTYAKHGKA--VPENLAMFYTLQMLRSIHMVHAAHFLHGDIKPDNWVL-------------------LRGSALSTGAAAFETSELSLIDFGRSIDLHLYP---KGTCFKGDCHAKGFQCVEMLTKRPWRHQVDAFGVIATAHFLLFGDYIELHTTSSS---------------------TWRIKRQWKRYWRSDLWSVLFDTVLNVPSC 990
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: UPI00053FE1A2 (mitotic checkpoint serine/threonine-protein kinase BUB1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FE1A2) HSP 1 Score: 127 bits (318), Expect = 6.970e-27 Identity = 95/278 (34.17%), Postives = 133/278 (47.84%), Query Frame = 1
Query: 1249 GTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYLVPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLNWQACAGGAYGDKEDTGATAGSEGTRVCTHTSTLLAELEGQVLRHLESSPEHVQQLRHLLRQQANML 2082
GTL + +Y V T+ M E+ ++YT EML + LHSA I+H D KPDN L+ +D + + RC P +GL L+D+GR IDL +P E F G C SGF C M ED PWK + D YGL +H MLHG+Y+ A DG G F+ +P P KRY +LW+N+F++LLN Q C +D H TL EL ++ S+P ++++L+ LR+Q + L
Sbjct: 310 GTLQDAINSYLVVTTF--MEEVSCIYYTIEMLHILETLHSAGIIHGDFKPDNLLIRYSRDNLTDEKD----DFVKRC-------GPWQDQGLCLVDWGRGIDLNLFPADTE---FIGDCRTSGFCCVEMQEDKPWKFQVDTYGLCVVVHMMLHGSYMEIE-KRASSDG----------GYFY------LPKLPFKRYQNIMLWENLFKRLLNIQPC--------DD--------------HLMTL-RELRESFQEYMVSNPSNIKKLKDSLRKQRSSL 531
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: W2RDA4_PHYPN (BUB protein kinase n=13 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RDA4_PHYPN) HSP 1 Score: 129 bits (325), Expect = 7.090e-27 Identity = 103/365 (28.22%), Postives = 157/365 (43.01%), Query Frame = 1
Query: 811 TVDVLCILGEGAYAQVYACCLRGD--HCAEEVAVKVERPVVNLPWECFITLQLRDRLRLMAAAEGQASSPNPQSTSPLQVGQRDASPSGAGGSSGPLLGRSERLQVLASSSPLPLAQQTGGMDIQVVRPLGLYVFGDGCCMSMAKGDSGTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRC-KDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYLVPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLNWQAC 1896
TV ++ +LG G++A V++ + + AVK+E+ NL WE +IT +++ +LR ++ G D E++ P+P + L++F +G + M KG GTL ++ Y PE++A++Y +MLR + LHSA++LH DIKPDNWL++ PG + L ++ L LID+GRSIDL YP + +FRG C A GF C M PW ++ D + +H ML G Y+ + K GA H W + KRYW +W+N F LLN +C
Sbjct: 815 TVQLVGVLGSGSFAYVFSAKVVDTTINSTRNKAVKIEKERQNLAWEFYITNKIKKKLR-------------------IERGIPD-----------------EKI-------PVPTLTE-------------LHLFSNGALLIMDKGHVGTLFDVLNCY--KQWGTTFPEVLAVYYGIKMLRCIELLHSANVLHGDIKPDNWLMI-----------PGNPSSELELISQEPKLDKVYQAGDLYLIDYGRSIDLSFYP---DGTVFRGSCHAKGFQCVEMLTQRPWTYQIDTFAFCGTMHCMLFGEYMEVKPKRNAK------------GATH-----WGIVRQFKRYWQVDMWENFFHVLLNVHSC 1090
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: A0A5A7SMW7_CUCME (Protein TPX2 n=3 Tax=Cucumis melo TaxID=3656 RepID=A0A5A7SMW7_CUCME) HSP 1 Score: 129 bits (324), Expect = 1.090e-26 Identity = 83/229 (36.24%), Postives = 115/229 (50.22%), Query Frame = 1
Query: 1198 LYVFGDGCCMSMAKGDSGTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYLVPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLN 1884
+Y++ D + +GTL + +Y V M E++ ++YT EML + LHS I+H D KPDN LLV + +G E D + P +GL L+D+GR IDL +P E V F+G C SGF CP M E+ PWK++ D+YGL +H MLHG+Y+ +A DG V++P KRYW LW N+F KLLN
Sbjct: 1135 MYLYSDYSILICDYLANGTLQDAINSYVVLGKT--MEEVLCIYYTIEMLYMLETLHSIGIIHGDFKPDN-LLVRY-------AGENLTE-----DDFQERRGPWQDQGLCLVDWGRGIDLQLFP---ENVEFKGDCRTSGFRCPEMLENRPWKYQVDIYGLCVVVHTMLHGSYMEVE-KKASSDGDF----------------VYLPKSSFKRYWNIELWKNLFTKLLN 1328
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Match: A0A830BWA7_9LAMI (Mitotic checkpoint serine/threonine-protein kinase bub1 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BWA7_9LAMI) HSP 1 Score: 119 bits (298), Expect = 4.420e-24 Identity = 75/214 (35.05%), Postives = 106/214 (49.53%), Query Frame = 1
Query: 1249 GTLHTLVAAYAVNTSAGCMPELVAMHYTAEMLRYVRALHSASILHMDIKPDNWLLVTHKDPPSSASGPGPMEAPLRCKDASQVPAPLAVEGLSLIDFGRSIDLLAYPCAGERVMFRGRCVASGFHCPAMTEDLPWKHEPDLYGLGACIHFMLHGAYL-VPRLTEADKDGXXXXXXXGGQGAFHAPQGVWMPSKPCKRYWAGVLWDNVFRKLLNW 1887
GTL V V + G M E++ ++YT EML+ + LH+ASI+H D KPDN L+ ++ P+ E R + + +GLSL+D+GR IDL +P F+G C SGF C M E PW + D+YGL +H MLH +Y+ + + D G+F + P KRYW LW N+F KLLN+
Sbjct: 406 GTLQDAVNCNVV--TGGSMEEVLCIYYTIEMLQILETLHAASIIHGDFKPDNLLIRYSREDPTEN------ENDFRLRTGTW-----RDQGLSLVDWGRGIDLSLFP---NNTKFKGDCRTSGFRCIEMQEKKPWTFQVDMYGLCVIVHMMLHNSYMEIEKRASLD-------------GSF-----FYQPKSHYKRYWNVDLWKNMFSKLLNY 585 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig85.20162.1 >prot_S-ischiensis_contig85.20162.1 ID=prot_S-ischiensis_contig85.20162.1|Name=mRNA_S-ischiensis_contig85.20162.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=658bp MCRDPSKVFRLLLQRQIGTQLALFWVAWAYAAEASDDYDGAARIYHEAQTback to top mRNA from alignment at S-ischiensis_contig85:516168..524762- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig85.20162.1 ID=mRNA_S-ischiensis_contig85.20162.1|Name=mRNA_S-ischiensis_contig85.20162.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8595bp|location=Sequence derived from alignment at S-ischiensis_contig85:516168..524762- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig85:516168..524762- >mRNA_S-ischiensis_contig85.20162.1 ID=mRNA_S-ischiensis_contig85.20162.1|Name=mRNA_S-ischiensis_contig85.20162.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3948bp|location=Sequence derived from alignment at S-ischiensis_contig85:516168..524762- (Schizocladia ischiensis KU_0333)back to top |