mRNA_S-ischiensis_contig85.20139.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-ischiensis_contig85.20139.1
Unique Name	mRNA_S-ischiensis_contig85.20139.1
Type	mRNA
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)

Homology

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: A0A6H5JFF7_9PHAE (DUF4209 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF7_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 3.280e-30
Identity = 177/660 (26.82%), Postives = 231/660 (35.00%), Query Frame = 1

Query:   88 NASPYVASLSDFVAGR------------GASPPSKGSSAFLSCLASEVRRQLRAPDCILGSRPSWRVSPST-------------------GLIEWPRVGVGPARSPK-DVLRDTWLVAHQCHAHLQSPAADVAAY------------------RELLAELSFGDGDTMEVVFRGIVRGDS--DTALLCLTVCFTVLESALYKI---------------------QAHARRRKKLELSPTSA------------AIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLITLGLTQQTGTHPQPGGPKTAPGLAHDQGAPEAQSNYSTPLAPPPPSSSPCPRVVQGNCRGVTPSMGDCHSSGSPGSXXXXXSSGCSVSPEWDGNAAAXXXXXXXXXXXQGQPTVLPLLPSAVPTXXXXXXXXXXXXXXXXXXXXXXKQPLRLHASQGAQASAPCTLVTTDDAPTQAPAPPXXXXXXLLAPLXXAPARXXXXXXSAAGPPPVWGGGFGPHCPPGLIPWCDSSAPGRVVRRLLTKEHGRELEEMCRRSAFVFPGREGLVARALEALRLGQDG--------------VFCVLALPLVEHGLRLLFCCSNGCPGELFARRRRYYCTLDGYGQRTRHQLLL 1770
            ++SP++  LS FV               G  PP+      LSCL+ EV  +LR  +   G +   R + +                    G +EW RV +        + L D   +A  CHA LQ                           RE+  E        M  V   IVR +S  +   + L VC T+LE ALY+I                      +   R +  E+   +A            A+ILRDL+   E++ ALP  L+ +LRLLLLP G N+RNLVWHGFLAP ELPRELASLVL++TL ++           P+   G     G P   S+   PL+P                                                                         P LP   P                           +LH S  + A+A   L + DD                LA                              CP  L            V  LL+ +H  EL+ + RRSAFV PGRE L   AL AL   +D                F V  LP++EHGLR+LF  +N  PG +FA   RYY TLDG+GQR RHQLLL
Sbjct:   21 SSSPFLRGLSSFVRRESDIATLSSEVESGPKPPT------LSCLSPEVLARLRFVENAAGRQQGNRTAAAGPTEGKTSVGEQDISLFSEGGRVEWSRVRMSATGDGGVEALADGARLAVACHAALQQQXXXXXXXXXXXXXXXXXXXXXXXXPREVTNERL-----QMPGVVERIVRAESSEEQVYVALCVCLTILERALYEIYRKGVSQTNNNYRSVGEQHRSDSTLAREESSEVKEDAAGVDGRGGSLGAPAMILRDLIATPEVKAALPEQLVAILRLLLLPMGFNIRNLVWHGFLAPCELPRELASLVLVVTLSISADLS-------PEGEAGDVARFGEPPELSSRKLPLSP-------------------------------------------------------------------------PTLPMTAP---------------------------QLHPS--SSAAAWWELDSFDDR---------------LA------------------------------CPRALT---------SAVECLLSAQHRGELKALVRRSAFVLPGREKLTMLALRALAGERDAQGDDEEEGNGGGIAFFLVALLPVLEHGLRVLFSSANDSPGHMFAHTLRYYSTLDGFGQRARHQLLL 506

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: D7FQF8_ECTSI (DUF4209 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF8_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 3.830e-29
Identity = 174/656 (26.52%), Postives = 231/656 (35.21%), Query Frame = 1

Query:   88 NASPYVASLSDFV------------AGRGASPPSKGSSAFLSCLASEVRRQLRAPDCILGSRPSWRVSPST-------------------GLIEWPRVGVGPARSPK-DVLRDTWLVAHQCHAHLQSP-------------AADVAAYRELLAELSFGDGDTMEVVFRGIVRGDS--DTALLCLTVCFTVLESALYKIQ------------------------AHARRRKKLEL---------SPTSAAIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLITLGLTQQTGTHPQPGGPKTAPGLAHDQGAPEAQSNYSTPLAPPPPSSSPCPRVVQGNCRGVTPSMGDCHSSGSPGSXXXXXSSGCSVSPEWDGNAAAXXXXXXXXXXXQGQPTVLPLLPSAVPTXXXXXXXXXXXXXXXXXXXXXXKQPLRLHASQGAQASAPCTLVTTDDAPTQAPAPPXXXXXXLLAPLXXAPARXXXXXXSAAGPPPVWGGGFGPHCPPGLIPWCDSSAPGRVVRRLLTKEHGRELEEMCRRSAFVFPGREGLVARALEALRLGQDG---------------VFCVLALPLVEHGLRLLFCCSNGCPGELFARRRRYYCTLDGYGQRTRHQLLL 1770
            ++SP+   LS FV            A  G  PP+      LSCL+ EV  +LR  +   G +   R + +                    G +EW RV +  +     + L D   +A  CHA LQ               AA  ++    +      +   M  V   IVR +S  +   + L VC T+LE ALY I                         AH    +  E          S  + A+ILRDL+   E++ ALP  L+ +LRLLLLP G N+RNLVWHGFLAP ELPRELASLVL++TL ++  +    + G       +A     PE  S     L+P                                                                         P LP   P                                + + A+A   L + D+                LA                              CP  L            V  LL+ +H  EL+ + RRSAFV PGRE L   AL AL   +D                 F V  LP++EHGLR+LF C+N  PG +FA  +RYY TLDG+GQR RHQLLL
Sbjct:   21 SSSPFFRGLSSFVRRESAIAAFSSEAESGRKPPT------LSCLSPEVLARLRFVENAAGRQQGNRTAAAGRTEGRTSVGEQDISLFSEGGRVEWSRVRISASGDGGVEALADGARLAVVCHAALQRHQQQQQRQGQLEQLAAPTSSPLPPVPREVTNERLQMPGVVERIVRAESSKEQVYVALCVCLTILERALYDIYRKGASQTNNNYRSVGEEHGSDSTLAHEESFEGKEDAEGIDGRGGSLGAPAMILRDLIATPEVKAALPEQLVAILRLLLLPMGFNVRNLVWHGFLAPCELPRELASLVLVVTLSISADSSPEGETGD------VARFGEQPELSSRKLL-LSP-------------------------------------------------------------------------PTLPKTAP-----------------------------QLDRSSSATAWWELDSFDNR---------------LA------------------------------CPRALA---------SAVEYLLSAQHRDELKTLVRRSAFVLPGREKLTMLALRALGGERDAQGDXXXXXXXXXXXXFFLVAVLPVLEHGLRVLFSCANDSPGHMFAHAQRYYSTLDGFGQRARHQLLL 507

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: A0A329RKB4_9STRA (DUF4209 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RKB4_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.290e-15
Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 1

Query:  490 LCLTVCFTVLESALYKIQAHARRRKKLELSPTSAA-IILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLITLGLTQQTG 801
            +   V  TVLE ALY +  H  R    EL  +    +ILRDLL +  L + LP  L+++L++L LPAG+NLRNLVWHGF+AP E P+   SL LL+ + L +  G
Sbjct:   11 MAFVVGITVLEKALYDL--HDERSTSSELVKSRKKNMILRDLLHSDTLVDTLPEGLIRLLKILFLPAGLNLRNLVWHGFMAPVEFPKCFGSLTLLLIMALPRYFG 113

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: A0A6G0X2X4_9STRA (DUF4209 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2X4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.090e-15
Identity = 63/175 (36.00%), Postives = 86/175 (49.14%), Query Frame = 1

Query:  259 STGLIEWPRVG---VGPARSPKDVLRDTWLVAHQCHAHLQSPAADVAAYRELLAELSFGDGDTMEVVFRGIVRGDSDTALLCLTVCFTVLESALYKIQAHARRRKKLELSPTSAAIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLI 774
            S   I W  VG     P  S    +   W +AHQ    LQ    D++ +++L    +      M  +      G   +     T+  T+LE ALY   A   +            +ILRDLL + EL +ALP+  MQVLR+L LP G+N+RNLVWHGFLAP ELP  L SL+ ++
Sbjct:    9 SPWAINWDLVGQWIAEPVASEFHAIDCVWTLAHQVDEALQDTPIDISVFQDLTHACA------MPQLLDHFQAGHFYSTF---TILVTILERALYDKYAPHHKSN----------MILRDLLHSPELVQALPQGYMQVLRILFLPTGLNIRNLVWHGFLAPFELPGCLCSLLFVL 164

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: G4ZKU5_PHYSP (DUF4209 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZKU5_PHYSP)

HSP 1 Score: 87.0 bits (214), Expect = 3.040e-14
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 1

Query:  460 IVRGDSDTALLCLTVCFTVLESALYKIQAHARRRKKLELSPTSAAIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLITLGLTQQTG 801
            ++R +S    L   V  T+LE ALY +  H +R            +ILRDLL +  LE+ALP  L+++L++L LP+G+NLRNLVWHGF+AP+E P+    L LL+ + L +  G
Sbjct:    1 MLRDESGEFFLAFVVGVTILEKALYDL--HDQRSSPSGPVKKKKNMILRDLLHSGTLEDALPPGLLRLLKVLFLPSGLNLRNLVWHGFMAPAEFPKCFGCLTLLLIMALPRLIG 112

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: T0RJZ6_SAPDV (DUF4209 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RJZ6_SAPDV)

HSP 1 Score: 86.3 bits (212), Expect = 6.570e-14
Identity = 64/173 (36.99%), Postives = 84/173 (48.55%), Query Frame = 1

Query:  271 IEWPRVGVGPARS--PKDVLRDTWLVAHQCHAHLQS-PAADVAAYRELLAELSFGDGDTMEVVFRGIVRGDSDTA--LLCLTVCFTVLESALYKIQAHARRRKKLELSPTSAAIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLI 774
            + WP      A S  P   +   W VA     HL++ P A    +  L + L  G           +VR    T    +  T+  TVLE ALY   A      K  +       ILRDLLQ+ EL EALP   +Q+LRLL  P+G+NLRNLVWHGF+AP + P    SL+L++
Sbjct:   44 VSWPAFAAAVANSDAPGHGVDCAWTVALAVDRHLRAAPEATCERFEALCSGLPHG------AALPPLVRTHWATGHHYISFTLLVTVLERALYNAYARCNDGVKSNM-------ILRDLLQSPELVEALPPGYLQLLRLLFFPSGLNLRNLVWHGFVAPMDFPGCFGSLLLVL 203

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: A0A6A3WZB9_9STRA (DUF4209 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3WZB9_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.040e-13
Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1

Query:  460 IVRGDSDTALLCLTVCFTVLESALYKIQAHARRRKKLELSPTSAAIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLITLGL 786
            ++R D     L   V  T+LE ALY +  H +R      +     +ILRDLL +  L +ALP  L+++L++L LP+G+NLRNLVWHGFLAP+E P+    L LL+ + L
Sbjct:  125 MLRDDHGDFFLAFVVGVTILEKALYDL--HDQRSAAAGPTKKKKNLILRDLLHSDTLVDALPEGLLRLLKVLFLPSGLNLRNLVWHGFLAPAEFPKCFGCLTLLLIMAL 231

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: A0A024U089_9STRA (DUF4209 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U089_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.960e-13
Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 1

Query:  334 WLVAHQCHAHLQSPAADVAAYRELLAELSFGDGDTMEVVFRGIVRGDSDTALLCLTVCFTVLESALYKIQAHARRRKKLELSPTSAAIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLI 774
            W +AH  HA ++  + +V  +  L           +  V   +  G    +    T+  T+LE ALY   A   + +K  +       ILRDLL +  L + LPR  MQVL +L LP+G+N+RNLVWHGFLAP ELP  L SL+L++
Sbjct:   18 WTLAHAVHAAMEHDSVEVTIHSSLT------HASVVPFVVDQLRHGHFYASF---TILVTILERALYDQYAALHKGQKSNM-------ILRDLLHSPTLHKHLPRGYMQVLHVLFLPSGLNIRNLVWHGFLAPFELPGCLNSLLLVL 148

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BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: A0A485KWP8_9STRA (Aste57867_12874 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWP8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.030e-13
Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 1

Query:  334 WLVAHQCHAHLQSPAADVAAYRELLAELSFGDGDTMEVVFRGIVRGDSDTALLCLTVCFTVLESALYKIQA--HARRRKKLELSPTSAAIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLI 774
            W +AH   A L     D + Y+ L         + +  +   +  GD  +   C+ V  TVLE ALY   A  HA +R  +         ILRDLL + EL+ +LP   M VLR+L LP+G+N+RNLVWHGFLAP ELPR  +SL+L++
Sbjct:   60 WTLAHFVDASLLLHPIDGSVYQGLTHT------EVLPSLQEQLAAGDFYSTF-CILV--TVLERALYDKYASLHAGQRSNM---------ILRDLLHSPELQTSLPSGFMHVLRVLFLPSGLNIRNLVWHGFLAPCELPRCWSSLLLVL 190

[Close]

BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Match: A0A067BQN9_SAPPC (DUF4209 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BQN9_SAPPC)

HSP 1 Score: 83.6 bits (205), Expect = 2.620e-13
Identity = 62/171 (36.26%), Postives = 87/171 (50.88%), Query Frame = 1

Query:  271 IEWPR--VGVGPARSPKDVLRDTWLVAHQCHAHLQS-PAADVAAYRELLAELSFGDGDTMEVVFRGIVRGDSDTALLCLTVCFTVLESALYKIQAHARRRKKLELSPTSAAIILRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRELASLVLLI 774
            + WP     +  + +P   +   W VA     HL++ P A    +  L+  L  G   T+  + R           +  T+  TVLE ALY   A      K  +       ILRDLLQ+ EL +ALP   +Q+LRLL  P+G+NLRNLVWHGF+AP +LP   ASL+L++
Sbjct:   44 LSWPAFVAAIRGSDAPGHGVDCAWTVALAVDRHLRAAPEATCERFEALVNGLPHGA--TLSPLVRTYWAHGHH--YISFTLLVTVLERALYNTYARCNDGVKSNM-------ILRDLLQSPELVQALPPGYLQLLRLLFFPSGLNLRNLVWHGFVAPMDLPGCFASLLLVL 203

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig85.20139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JFF7_9PHAE	3.280e-30	26.82	DUF4209 domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FQF8_ECTSI	3.830e-29	26.52	DUF4209 domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A329RKB4_9STRA	3.290e-15	45.71	DUF4209 domain-containing protein n=1 Tax=Phytopht...	[more]
A0A6G0X2X4_9STRA	5.090e-15	36.00	DUF4209 domain-containing protein n=1 Tax=Aphanomy...	[more]
G4ZKU5_PHYSP	3.040e-14	42.11	DUF4209 domain-containing protein n=1 Tax=Phytopht...	[more]
T0RJZ6_SAPDV	6.570e-14	36.99	DUF4209 domain-containing protein n=1 Tax=Saproleg...	[more]
A0A6A3WZB9_9STRA	1.040e-13	43.12	DUF4209 domain-containing protein n=2 Tax=Phytopht...	[more]
A0A024U089_9STRA	1.960e-13	37.41	DUF4209 domain-containing protein n=1 Tax=Aphanomy...	[more]
A0A485KWP8_9STRA	2.030e-13	40.27	Aste57867_12874 protein n=2 Tax=Aphanomyces stella...	[more]
A0A067BQN9_SAPPC	2.620e-13	36.26	DUF4209 domain-containing protein n=1 Tax=Saproleg...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig85	contig	S-ischiensis_contig85:306570..310968 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	135.6
Seed ortholog evalue	8e-29
Seed eggNOG ortholog	2880.D7FQF8
Preferred name	ERMARD
EggNOG free text desc.	Domain of unknown function (DUF4209)
EggNOG OGs	28JNU@1,2QS21@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	4
Model size	1859
Cds size	1857
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig85.20139.1	prot_S-ischiensis_contig85.20139.1	Schizocladia ischiensis KU_0333	polypeptide	S-ischiensis_contig85 306570..310968 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817342.1724072-CDS-S-ischiensis_contig85:306569..307280	1622817342.1724072-CDS-S-ischiensis_contig85:306569..307280	Schizocladia ischiensis KU_0333	CDS	S-ischiensis_contig85 306570..307280 +
1695741041.5717402-CDS-S-ischiensis_contig85:306569..307280	1695741041.5717402-CDS-S-ischiensis_contig85:306569..307280	Schizocladia ischiensis KU_0333	CDS	S-ischiensis_contig85 306570..307280 +
1622817342.1836815-CDS-S-ischiensis_contig85:307780..308804	1622817342.1836815-CDS-S-ischiensis_contig85:307780..308804	Schizocladia ischiensis KU_0333	CDS	S-ischiensis_contig85 307781..308804 +
1695741041.58537-CDS-S-ischiensis_contig85:307780..308804	1695741041.58537-CDS-S-ischiensis_contig85:307780..308804	Schizocladia ischiensis KU_0333	CDS	S-ischiensis_contig85 307781..308804 +
1622817342.194693-CDS-S-ischiensis_contig85:310379..310441	1622817342.194693-CDS-S-ischiensis_contig85:310379..310441	Schizocladia ischiensis KU_0333	CDS	S-ischiensis_contig85 310380..310441 +
1695741041.6030672-CDS-S-ischiensis_contig85:310379..310441	1695741041.6030672-CDS-S-ischiensis_contig85:310379..310441	Schizocladia ischiensis KU_0333	CDS	S-ischiensis_contig85 310380..310441 +
1622817342.2056391-CDS-S-ischiensis_contig85:310908..310968	1622817342.2056391-CDS-S-ischiensis_contig85:310908..310968	Schizocladia ischiensis KU_0333	CDS	S-ischiensis_contig85 310909..310968 +
1695741041.6125388-CDS-S-ischiensis_contig85:310908..310968	1695741041.6125388-CDS-S-ischiensis_contig85:310908..310968	Schizocladia ischiensis KU_0333	CDS	S-ischiensis_contig85 310909..310968 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-ischiensis_contig85:306570..310968+
coding sequence from alignment at S-ischiensis_contig85:306570..310968+

protein sequence of mRNA_S-ischiensis_contig85.20139.1

>prot_S-ischiensis_contig85.20139.1 ID=prot_S-ischiensis_contig85.20139.1|Name=mRNA_S-ischiensis_contig85.20139.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=619bp
MEVQGMPTTNARETDDDVDEDDQSLRRSFNASPYVASLSDFVAGRGASPP
SKGSSAFLSCLASEVRRQLRAPDCILGSRPSWRVSPSTGLIEWPRVGVGP
ARSPKDVLRDTWLVAHQCHAHLQSPAADVAAYRELLAELSFGDGDTMEVV
FRGIVRGDSDTALLCLTVCFTVLESALYKIQAHARRRKKLELSPTSAAII
LRDLLQARELEEALPRDLMQVLRLLLLPAGINLRNLVWHGFLAPSELPRE
LASLVLLITLGLTQQTGTHPQPGGPKTAPGLAHDQGAPEAQSNYSTPLAP
PPPSSSPCPRVVQGNCRGVTPSMGDCHSSGSPGSGGRGGSSGCSVSPEWD
GNAAAAPAPAASPSPSQGQPTVLPLLPSAVPTPASFSSSPSQGQQPAVLP
LLPKKQPLRLHASQGAQASAPCTLVTTDDAPTQAPAPPAPPPPPLLAPLP
PAPARAPSRAPSAAGPPPVWGGGFGPHCPPGLIPWCDSSAPGRVVRRLLT
KEHGRELEEMCRRSAFVFPGREGLVARALEALRLGQDGVFCVLALPLVEH
GLRLLFCCSNGCPGELFARRRRYYCTLDGYGQRTRHQLLLAGDTIHSNVA
KPPSSAQDCGGDETLPVWG

mRNA from alignment at S-ischiensis_contig85:306570..310968+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-ischiensis_contig85.20139.1 ID=mRNA_S-ischiensis_contig85.20139.1|Name=mRNA_S-ischiensis_contig85.20139.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4399bp|location=Sequence derived from alignment at S-ischiensis_contig85:306570..310968+ (Schizocladia ischiensis KU_0333)
ATGGAAGTGCAAGGGATGCCCACAACCAACGCACGGGAGACGGACGACGA
TGTTGACGAGGATGACCAAAGCCTGCGTAGGTCCTTCAATGCCTCGCCCT
ACGTAGCATCCCTCAGTGACTTTGTCGCCGGTAGAGGGGCGAGCCCCCCG
TCCAAAGGCAGCTCGGCGTTCTTGTCTTGCCTGGCCTCCGAGGTTCGTCG
TCAGCTGCGTGCACCGGACTGTATCCTTGGATCACGACCTAGTTGGCGCG
TGTCGCCGAGTACGGGCCTCATTGAGTGGCCACGGGTTGGGGTCGGTCCA
GCTAGGAGCCCAAAAGACGTGCTCAGGGACACCTGGCTCGTGGCCCACCA
GTGCCATGCCCACCTGCAAAGCCCCGCTGCCGATGTGGCGGCGTACCGGG
AGCTTCTCGCCGAGCTCTCGTTCGGCGACGGTGACACGATGGAGGTGGTG
TTCCGCGGCATCGTCAGGGGCGACAGTGACACGGCTCTCCTCTGCCTTAC
CGTCTGCTTCACCGTCCTGGAGAGCGCGCTCTACAAGATTCAAGCGCACG
CGCGGCGGCGGAAAAAGCTCGAGCTCTCGCCGACCAGCGCTGCAATCATC
CTTCGCGACCTGCTGCAGGCGCGGGAGTTGGAGGAGGCGTTGCCGAGGGA
TTTGATGCAGGTTCTTCGCCTCCTTCTGCTGCCGGCTGGCATCAACCTCA
GGAATCTCGTGGTGGGTGGCCTCGAACTCTTTAAGGCCCCTTTCTGAGTG
TCACGCGTCCGGGCCGTCTTTGACGCTGACAAGCAAACAGTACTTCCAAG
TTTTATGTGCCGTTGCACTCATGGAAGGGCTGCTGCTGTGCAGCAACTGT
GCCAATCGATGGGTTAGAGCTTCACGCCAGCCGGCAGCACGAGAGGTTTC
TTCCACGCTTGTGTTTCAACTGTAGTGGAAGGTATGTGATGTGATGAGAC
GTGGTGTGTACTCTCATGTACTCGAGTACTGTGATTGACATCACGTCACA
TCGCATCAGCATGTGATGTGATGTAATGTGCACTCTCATGTACGGTGACA
TCACATTGCAGTGCAGAGAATCAAGCCGTTTGGCGAGATCAACCCAGCGT
GACACCCAAATGCCTGCGCGCGCGGCACACACCTTGGCATACACGATTCT
GCTGGACCGCCTACCGACCGACTGCCCGCCATCACCCTCTTCACATTCCA
CAACACCCCAGTGGCATGGCTTCCTGGCCCCCAGTGAGCTGCCCCGTGAG
CTGGCGTCTTTGGTGCTGCTCATCACCCTGGGCCTGACGCAGCAAACAGG
CACACACCCACAGCCAGGGGGCCCCAAAACCGCCCCCGGCCTCGCACACG
ACCAAGGCGCCCCCGAAGCCCAGTCCAACTACTCCACACCATTGGCACCA
CCACCCCCCTCCTCCTCTCCCTGCCCACGCGTGGTCCAAGGCAACTGCCG
CGGCGTGACACCGAGCATGGGGGACTGCCACAGTAGCGGCAGCCCAGGCA
GCGGCGGCCGCGGTGGCAGCAGCGGCTGCAGTGTGTCCCCGGAGTGGGAT
GGCAATGCCGCTGCTGCGCCCGCCCCTGCAGCCTCCCCCTCTCCTTCCCA
AGGGCAGCCTACCGTCCTTCCCCTCCTGCCTTCCGCTGTCCCCACCCCTG
CATCCTTCTCCTCCTCTCCTTCACAAGGGCAGCAGCCTGCCGTCCTTCCC
CTCCTGCCGAAAAAGCAGCCCCTCCGGCTGCACGCCTCTCAAGGCGCCCA
AGCATCTGCCCCTTGTACGCTGGTGACCACCGATGATGCCCCAACCCAGG
CGCCTGCCCCACCGGCGCCGCCGCCGCCGCCACTGCTTGCGCCGCTACCT
CCAGCACCAGCCCGCGCCCCGTCCCGCGCCCCGTCCGCCGCGGGCCCCCC
GCCTGTGTGGGGTGGCGGTTTTGGCCCACATTGCCCTCCAGGGCTCATTC
CGTGGTGCGATTCTTCCGCCCCGGGGCGCGTGGTGCGACGCCTGCTCACT
AAGGAACATGGGCGGGAGCTGGAGGAGATGTGCCGACGTTCGGCCTTTGT
GTTCCCGGGGAGGGAGGGGCTGGTGGCGAGGGCTCTGGAGGCGTTAAGAT
TGGGGCAGGATGGCGTTTTCTGCGTTTTGGCCCTCCCGCTGGTGGAGCAC
GGGCTAAGGTTGCTCTTCTGCTGCTCGAACGGCTGTCCGGGGGAGCTGTT
TGCAAGGAGACGGCGGTACTACTGCACCTTGGACGGTGAGAGTCTCGCCA
CGTAGGATACAGCACTGGACTACTGAGTAGCTAGTGCAATGCCCGAGGGT
GGACTGGTGCAACAGTGCGGTATACCGTACTGATTTTTTTACTACTGCAC
CTTGGATGGTGAGAGTCTCGCCATGTACTGAACTGGCCTACTAGTATCAA
GTGCATTGCCAGTGTGGAGTAGTGGGTGCTTGTACGTACGTGGGGAGTAC
TTCGAAGTACTATTTGGAGTAGTGAGTAGGTACTTTGAAAGCACTTTGAA
GTACTATTTGGAGTAGTGGGTACGTGCTTTGAAGTACTTGAATGTCGTAC
ACTGGGACGACGGTCCGTGGCGTGCGCAGGACAGGGTCTCCCCTGCCCAA
CATAGGTTAGCGCTAAGAGTACACGCGTCGGTTAGGTTAGAGTACACACG
GCCTGCAAGTGCTTCCAAGTTGGAGTAGTGCAGACAGTACAGTAGGCATG
ATATGTATCCCCATTACACTGCTCAGGCTCAGCACTACCACTTGAGTACG
AGTGCTACTGCCGGAACTACTAGAGTGCACACGTCCTCAACTAGTAGTAG
ACAGTACAGTAGGTTTTCTATGTACCCCCACTACACTACTCAGACATAGC
ACTACTACTGGGCTACTTTTGTACTGTAGTATTAACAGGAAGAACACAGG
TGAGGTGCAGGCCACGTCACTAAACACCTACTCAGACCATGTAGGTACTC
CCTAAGGACACTGGAGCTCTCACTATGTATTCCCGTGGGTACTTTACCCC
TTTTACCCCTGCTATAAGGAAGGGCCACGGCTGAGATCTCTAGTGACGTG
GCCCGCACCTCGCCCTGTGCTGTTCCTGATAACTCTTTAACCCTTTTGCC
CCTGCTAAACTGGATTTACACACTATGTAAAACCCAATATTACATGGACC
CCAGGGGGACAAGGGTTTAAGCATGCTACTCGGACTTGGCAGTGCTTTGA
GGTAGGGTACTCCCCGTGGACACTGGAGCTCTCACGAACTTGTGGTGCAT
TGTTGTGCTGGGCACAGTCCAAGGATCTGTGGGGGGGAGTTATTCTTGGA
TGTGGTAACCGCTAGAGCTCTAGTGCGAGAACACTCGATTCTTTAATGGG
ATAACCACTAGTACGAGAACACTTAATCTCACACACGTGTGATTGTACTG
CGTTGCAATTTATATGAGTCATCACCAAGGATTTATCGGGGCATACTTAC
AGCTGCTCAGCCCCTGGGAGGGGTGGCTCTGAACCCCTCAGTGGTGCCCT
GTTAGGCGCGCAATTGGGGGTAATTCGGGGAAATCAGACCTAAAATGAAG
GCTAGCTGGGCCCTAATTATCCTCTAGGTGCCAACCCCGGCCCCTGGAGG
CGTTAATGCGGCACAAATGTATACTTATTGCCAAGTATAAAATGCGCACC
ACACTGTTTGGACAGCACGGATCCTACTTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTGATCCTAATGGTCCTACTCCTAATGCTCTGTCCCCCTTGAGGG
GACATGGTCAACGGCCATACGGCTGCAGCAAGCAGGTCATGAGTCCCCCC
GGGCGTGCAGGCTATGGTCAGCGCACGCGCCACCAGCTTCTCCTGGCCGG
GGATACCATCCATAGCAATGTGGTGAGTTCCTGTCGTGGATACGATGACG
GACAATGATAGCAGTGTGGTGAGTACCTGACGTGGGTACCATGACAGTCA
ATGATGGCAATGTGGTGAGTTCCAGCCGTGGATACCATGATGGACAATGA
TAGCAATGTGGTGAGCTCCTGTATCATGTCGCCTTAACCCCTTTACCCCT
GCTAGATTGGACTCACACACTAAAACCCTATGATTATACAGACATCAGGG
GTCAAAGGATTAATTGTCTTCCTGCCAAGGACACCACAGTACCTCTCGCT
ACTTTCGCTACCATGCTGTGCTGCCCTGTCCCGTCCTGCCCTGCACAGCT
GTCCTCGCAGGTACTTCGAAGCACTTTACCCTAGACCATGCGTGCATGGC
AATCCGTCATGACATGGCCCACTTGTCCGCAGTACTTCCAACTATTTTTT
ATCAAAATCGGTCCAACTGGCGTCTTGCCCGTTCTCCAGGCCAAGCCCCC
GAGCAGCGCGCAAGACTGCGGCGGGGATGAGACTCTCCCGGTCTGGGGC

Coding sequence (CDS) from alignment at S-ischiensis_contig85:306570..310968+

>mRNA_S-ischiensis_contig85.20139.1 ID=mRNA_S-ischiensis_contig85.20139.1|Name=mRNA_S-ischiensis_contig85.20139.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3714bp|location=Sequence derived from alignment at S-ischiensis_contig85:306570..310968+ (Schizocladia ischiensis KU_0333)
ATGGAAGTGCAAGGGATGCCCACAACCAACGCACGGGAGACGGACGACGA
TGTTGACGAGGATGACCAAAGCCTGCGTAGGTCCTTCAATGCCTCGCCCT
ACGTAGCATCCCTCAGTGACTTTGTCGCCGGTAGAGGGGCGAGCCCCCCG
TCCAAAGGCAGCTCGGCGTTCTTGTCTTGCCTGGCCTCCGAGGTTCGTCG
TCAGCTGCGTGCACCGGACTGTATCCTTGGATCACGACCTAGTTGGCGCG
TGTCGCCGAGTACGGGCCTCATTGAGTGGCCACGGGTTGGGGTCGGTCCA
GCTAGGAGCCCAAAAGACGTGCTCAGGGACACCTGGCTCGTGGCCCACCA
GTGCCATGCCCACCTGCAAAGCCCCGCTGCCGATGTGGCGGCGTACCGGG
AGCTTCTCGCCGAGCTCTCGTTCGGCGACGGTGACACGATGGAGGTGGTG
TTCCGCGGCATCGTCAGGGGCGACAGTGACACGGCTCTCCTCTGCCTTAC
CGTCTGCTTCACCGTCCTGGAGAGCGCGCTCTACAAGATTCAAGCGCACG
CGCGGCGGCGGAAAAAGCTCGAGCTCTCGCCGACCAGCGCTGCAATCATC
CTTCGCGACCTGCTGCAGGCGCGGGAGTTGGAGGAGGCGTTGCCGAGGGA
TTTGATGCAGGTTCTTCGCCTCCTTCTGCTGCCGGCTGGCATCAACCTCA
GGAATCTCGTGATGGAAGTGCAAGGGATGCCCACAACCAACGCACGGGAG
ACGGACGACGATGTTGACGAGGATGACCAAAGCCTGCGTAGGTCCTTCAA
TGCCTCGCCCTACGTAGCATCCCTCAGTGACTTTGTCGCCGGTAGAGGGG
CGAGCCCCCCGTCCAAAGGCAGCTCGGCGTTCTTGTCTTGCCTGGCCTCC
GAGGTTCGTCGTCAGCTGCGTGCACCGGACTGTATCCTTGGATCACGACC
TAGTTGGCGCGTGTCGCCGAGTACGGGCCTCATTGAGTGGCCACGGGTTG
GGGTCGGTCCAGCTAGGAGCCCAAAAGACGTGCTCAGGGACACCTGGCTC
GTGGCCCACCAGTGCCATGCCCACCTGCAAAGCCCCGCTGCCGATGTGGC
GGCGTACCGGGAGCTTCTCGCCGAGCTCTCGTTCGGCGACGGTGACACGA
TGGAGGTGGTGTTCCGCGGCATCGTCAGGGGCGACAGTGACACGGCTCTC
CTCTGCCTTACCGTCTGCTTCACCGTCCTGGAGAGCGCGCTCTACAAGAT
TCAAGCGCACGCGCGGCGGCGGAAAAAGCTCGAGCTCTCGCCGACCAGCG
CTGCAATCATCCTTCGCGACCTGCTGCAGGCGCGGGAGTTGGAGGAGGCG
TTGCCGAGGGATTTGATGCAGGTTCTTCGCCTCCTTCTGCTGCCGGCTGG
CATCAACCTCAGGAATCTCGTGTGGCATGGCTTCCTGGCCCCCAGTGAGC
TGCCCCGTGAGCTGGCGTCTTTGGTGCTGCTCATCACCCTGGGCCTGACG
CAGCAAACAGGCACACACCCACAGCCAGGGGGCCCCAAAACCGCCCCCGG
CCTCGCACACGACCAAGGCGCCCCCGAAGCCCAGTCCAACTACTCCACAC
CATTGGCACCACCACCCCCCTCCTCCTCTCCCTGCCCACGCGTGGTCCAA
GGCAACTGCCGCGGCGTGACACCGAGCATGGGGGACTGCCACAGTAGCGG
CAGCCCAGGCAGCGGCGGCCGCGGTGGCAGCAGCGGCTGCAGTGTGTCCC
CGGAGTGGGATGGCAATGCCGCTGCTGCGCCCGCCCCTGCAGCCTCCCCC
TCTCCTTCCCAAGGGCAGCCTACCGTCCTTCCCCTCCTGCCTTCCGCTGT
CCCCACCCCTGCATCCTTCTCCTCCTCTCCTTCACAAGGGCAGCAGCCTG
CCGTCCTTCCCCTCCTGCCGAAAAAGCAGCCCCTCCGGCTGCACGCCTCT
CAAGGCGCCCAAGCATCTGCCCCTTGTACGCTGGTGACCACCGATGATGC
CCCAACCCAGGCGCCTGCCCCACCGGCGCCGCCGCCGCCGCCACTGCTTG
CGCCGCTACCTCCAGCACCAGCCCGCGCCCCGTCCCGCGCCCCGTCCGCC
GCGGGCCCCCCGCCTGTGTGGGGTGGCGGTTTTGGCCCACATTGCCCTCC
AGGGCTCATTCCGTGGTGCGATTCTTCCGCCCCGGGGCGCGTGGTGCGAC
GCCTGCTCACTAAGGAACATGGGCGGGAGCTGGAGGAGATGTGCCGACGT
TCGGCCTTTGTGTTCCCGGGGAGGGAGGGGCTGGTGGCGAGGGCTCTGGA
GGCGTTAAGATTGGGGCAGGATGGCGTTTTCTGCGTTTTGGCCCTCCCGC
TGGTGGAGCACGGGCTAAGGTTGCTCTTCTGCTGCTCGAACGGCTGTCCG
GGGGAGCTGTTTGCAAGGAGACGGCGGTACTACTGCACCTTGGACGTGGC
ATGGCTTCCTGGCCCCCAGTGAGCTGCCCCGTGAGCTGGCGTCTTTGGTG
CTGCTCATCACCCTGGGCCTGACGCAGCAAACAGGCACACACCCACAGCC
AGGGGGCCCCAAAACCGCCCCCGGCCTCGCACACGACCAAGGCGCCCCCG
AAGCCCAGTCCAACTACTCCACACCATTGGCACCACCACCCCCCTCCTCC
TCTCCCTGCCCACGCGTGGTCCAAGGCAACTGCCGCGGCGTGACACCGAG
CATGGGGGACTGCCACAGTAGCGGCAGCCCAGGCAGCGGCGGCCGCGGTG
GCAGCAGCGGCTGCAGTGTGTCCCCGGAGTGGGATGGCAATGCCGCTGCT
GCGCCCGCCCCTGCAGCCTCCCCCTCTCCTTCCCAAGGGCAGCCTACCGT
CCTTCCCCTCCTGCCTTCCGCTGTCCCCACCCCTGCATCCTTCTCCTCCT
CTCCTTCACAAGGGCAGCAGCCTGCCGTCCTTCCCCTCCTGCCGAAAAAG
CAGCCCCTCCGGCTGCACGCCTCTCAAGGCGCCCAAGCATCTGCCCCTTG
TACGCTGGTGACCACCGATGATGCCCCAACCCAGGCGCCTGCCCCACCGG
CGCCGCCGCCGCCGCCACTGCTTGCGCCGCTACCTCCAGCACCAGCCCGC
GCCCCGTCCCGCGCCCCGTCCGCCGCGGGCCCCCCGCCTGTGTGGGGTGG
CGGTTTTGGCCCACATTGCCCTCCAGGGCTCATTCCGTGGTGCGATTCTT
CCGCCCCGGGGCGCGTGGTGCGACGCCTGCTCACTAAGGAACATGGGCGG
GAGCTGGAGGAGATGTGCCGACGTTCGGCCTTTGTGTTCCCGGGGAGGGA
GGGGCTGGTGGCGAGGGCTCTGGAGGCGTTAAGATTGGGGCAGGATGGCG
TTTTCTGCGTTTTGGCCCTCCCGCTGGTGGAGCACGGGCTAAGGTTGCTC
TTCTGCTGCTCGAACGGCTGTCCGGGGGAGCTGTTTGCAAGGAGACGGCG
GTACTACTGCACCTTGGACGGCTATGGTCAGCGCACGCGCCACCAGCTTC
TCCTGGCCGGGGATACCATCCATAGCAATGTGGCTATGGTCAGCGCACGC
GCCACCAGCTTCTCCTGGCCGGGGATACCATCCATAGCAATGTGGCCAAG
CCCCCGAGCAGCGCGCAAGACTGCGGCGGGGATGAGACTCTCCCGGTCTG
GGGCGCCAAGCCCCCGAGCAGCGCGCAAGACTGCGGCGGGGATGAGACTC
TCCCGGTCTGGGGC