mRNA_S-ischiensis_contig85.20137.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: UPI00143D8387 (secreted RxLR effector protein 161-like n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D8387) HSP 1 Score: 62.0 bits (149), Expect = 8.680e-9 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 2
Query: 224 QEAAYPRSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVV 409
QE + R LL ++ QQGP V+YEDN++ + L FS RTKHI+T++HY+ L ++G++
Sbjct: 122 QEGVWVRRLLEDMKQKQQGPTVVYEDNQSCLQLICNKKFSHRTKHIDTKYHYIKDLKDQGIM 183
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: UPI001ED8A2C8 (secreted RxLR effector protein 161-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8A2C8) HSP 1 Score: 62.0 bits (149), Expect = 1.200e-8 Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 2
Query: 212 AGRSQEAAYPRSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVVSV 415
A SQE + R LL + VQ PI++YEDN+ I +A FSARTKHI+ R H++ L++ V+ +
Sbjct: 149 ASASQEGVWLRQLLHDLGEVQNEPIIIYEDNQGCIKIASNEKFSARTKHIDVRHHFIRDLMKNNVIQL 216
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: A0A6G1EJC3_9ORYZ (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1EJC3_9ORYZ) HSP 1 Score: 60.5 bits (145), Expect = 6.530e-8 Identity = 29/75 (38.67%), Postives = 47/75 (62.67%), Query Frame = 2
Query: 227 EAAYPRSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVVSVQKIAMEESGRRP 451
+A + RSLL + Q P+ ++ DN++AI+L +F R+KHI+TRFH++ + VE G + V+ + MEE P
Sbjct: 218 QALWLRSLLAELNKEQPRPVKVFVDNKSAIALMKNPVFHGRSKHIDTRFHFIRECVEGGQIVVKFMRMEEQRADP 292
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: A0A4S4M556_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M556_9APHY) HSP 1 Score: 60.5 bits (145), Expect = 8.920e-8 Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 2
Query: 224 QEAAYPRSLLLSIE-HVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVVSV 415
+E Y RSL+L + PI LY DN++AI +A+ G+ ARTKHI+ R+ Y+ Q+VERG+ +
Sbjct: 781 RELVYLRSLVLELTGETTSSPITLYCDNQSAIKIALNGLLHARTKHIDIRYQYIRQVVERGLTEL 845
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: UPI0019297FE2 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0019297FE2) HSP 1 Score: 59.7 bits (143), Expect = 1.450e-7 Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 2
Query: 227 EAAYPRSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVVSVQKIAMEE 436
EA + R LL + Q P ++ DN+AAIS+A + RTKHI+TR+H++C+L++ G++ + E
Sbjct: 325 EAIWLRGLLEDLNEAQGSPSIIRCDNKAAISIARNPVMHGRTKHIDTRYHFICELMKDGLIDITHCGTNE 394
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: J6FCP9_TRIAS (Integrase catalytic domain-containing protein n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J6FCP9_TRIAS) HSP 1 Score: 59.7 bits (143), Expect = 1.740e-7 Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 2
Query: 221 SQEAAYPRSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVVSVQKI 424
++E + RSLLL + Q G +LY DN AA+ LA + R+K I+ RFHY+ +LVERGV+ ++ I
Sbjct: 1615 AREVVWLRSLLLELGFEQVGSTLLYGDNRAALVLAENPVAHTRSKQIDIRFHYLRELVERGVIQLEYI 1682
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: A0A803LCB7_CHEQI (Uncharacterized protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LCB7_CHEQI) HSP 1 Score: 58.5 bits (140), Expect = 1.770e-7 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 2
Query: 227 EAAYPRSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVVS 412
EA + R+LL HVQ+GP +Y DN +AI LA + R+KHI+TRFH++ V++G ++
Sbjct: 159 EALWLRNLLKETGHVQEGPTTIYVDNMSAIKLAKNPVQHGRSKHIDTRFHFLRDQVKQGTIT 220
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: H3G7Q7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7Q7_PHYRM) HSP 1 Score: 56.2 bits (134), Expect = 1.900e-7 Identity = 24/63 (38.10%), Postives = 42/63 (66.67%), Query Frame = 2
Query: 221 SQEAAYPRSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVV 409
+QE + R LL + + QG ++Y+DN+ I+LA ++ ARTKHI+ +FH++ + +ER V+
Sbjct: 11 TQETVWLRLLLKDMGYEDQGATLIYQDNQGCIALAKNPMYHARTKHIDIKFHFLREKIERAVI 73
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: UPI0007EF63DB (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF63DB) HSP 1 Score: 58.9 bits (141), Expect = 2.110e-7 Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 2
Query: 242 RSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVVSVQKIAME 433
R++L I + GP+VLY DN +AI LA +F R+KHI+ R+H++ + VERG + ++ ++ E
Sbjct: 203 RNVLNQISDEEIGPVVLYIDNRSAIDLAKNPVFHGRSKHIDIRYHFIRECVERGEIVLKHVSSE 266
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Match: UPI0007F02BA2 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F02BA2) HSP 1 Score: 58.9 bits (141), Expect = 2.400e-7 Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 2
Query: 278 GPIVLYEDNEAAISLAVKGIFSARTKHIETRFHYVCQLVERGVVSVQKIAMEE 436
GP+VLY DN +AI LA +F R+KHI+ RFH++ + VE+G V ++ I EE
Sbjct: 257 GPVVLYIDNRSAIDLAKNPVFHGRSKHIDLRFHFIRECVEKGEVVIKHIGTEE 309 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig85.20137.1 >prot_S-ischiensis_contig85.20137.1 ID=prot_S-ischiensis_contig85.20137.1|Name=mRNA_S-ischiensis_contig85.20137.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=89bp MWPWARRAGRSQEAAYPRSLLLSIEHVQQGPIVLYEDNEAAISLAVKGIFback to top mRNA from alignment at S-ischiensis_contig85:281560..282016+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig85.20137.1 ID=mRNA_S-ischiensis_contig85.20137.1|Name=mRNA_S-ischiensis_contig85.20137.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=457bp|location=Sequence derived from alignment at S-ischiensis_contig85:281560..282016+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig85:281560..282016+ >mRNA_S-ischiensis_contig85.20137.1 ID=mRNA_S-ischiensis_contig85.20137.1|Name=mRNA_S-ischiensis_contig85.20137.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=534bp|location=Sequence derived from alignment at S-ischiensis_contig85:281560..282016+ (Schizocladia ischiensis KU_0333)back to top |