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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 718 |
| Cds size | 384 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817339.2050889-CDS-S-ischiensis_contig85:99980..100269 | 1622817339.2050889-CDS-S-ischiensis_contig85:99980..100269 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 99981..100269 - |
| 1695741039.4563732-CDS-S-ischiensis_contig85:99980..100269 | 1695741039.4563732-CDS-S-ischiensis_contig85:99980..100269 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 99981..100269 - |
| 1622817339.217708-CDS-S-ischiensis_contig85:101013..101108 | 1622817339.217708-CDS-S-ischiensis_contig85:101013..101108 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 101014..101108 - |
| 1695741039.4673703-CDS-S-ischiensis_contig85:101013..101108 | 1695741039.4673703-CDS-S-ischiensis_contig85:101013..101108 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 101014..101108 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817339.2295249-UTR-S-ischiensis_contig85:101108..101225 | 1622817339.2295249-UTR-S-ischiensis_contig85:101108..101225 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 101109..101225 - |
| 1695741039.479392-UTR-S-ischiensis_contig85:101108..101225 | 1695741039.479392-UTR-S-ischiensis_contig85:101108..101225 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 101109..101225 - |
| 1622817339.2409158-UTR-S-ischiensis_contig85:101903..102016 | 1622817339.2409158-UTR-S-ischiensis_contig85:101903..102016 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 101904..102016 - |
| 1695741039.4898279-UTR-S-ischiensis_contig85:101903..102016 | 1695741039.4898279-UTR-S-ischiensis_contig85:101903..102016 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 101904..102016 - |
| 1622817339.2520714-UTR-S-ischiensis_contig85:103001..103104 | 1622817339.2520714-UTR-S-ischiensis_contig85:103001..103104 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 103002..103104 - |
| 1695741039.500152-UTR-S-ischiensis_contig85:103001..103104 | 1695741039.500152-UTR-S-ischiensis_contig85:103001..103104 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 103002..103104 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig85.20114.1 >prot_S-ischiensis_contig85.20114.1 ID=prot_S-ischiensis_contig85.20114.1|Name=mRNA_S-ischiensis_contig85.20114.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=128bp
MLGSVRLTTADLCYYEKEQRPGSFGSGACTETWCPCSAAKRRRTCRRSAA
PLAAQTCCTSLRWGQRSPTGERRGSSAQFASGGISMQINLFIDSTDFKIG
LMNASSGPRPNNLRWGPHQKPFFSPAGH back to topmRNA from alignment at S-ischiensis_contig85:99981..103104- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig85.20114.1 ID=mRNA_S-ischiensis_contig85.20114.1|Name=mRNA_S-ischiensis_contig85.20114.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3124bp|location=Sequence derived from alignment at S-ischiensis_contig85:99981..103104- (Schizocladia ischiensis KU_0333)
GTCCGACGCGGGGACGACGACGACGATGAGGGCCATGTGCCCGGAAGACC
TGCACACCGTCAGGGCCCTTCACGAGCAGTGCTTTCCTGTAAAATACACC
ACGGTGGGCGGGGCGGTGATTCAGATAAATTGTAACGAGGTACAATCGAA
CGTGTGTGAGATGGAGTGTTCTCGTATTAGTGGCTATCCAAACAGTGAGC
AGGGCGGCGGTGCCGGCAAAAAGCCCGGGTTGCCTTAGCTTGCCGGCAAG
GCAGCACGCGCAGATAATAGATGCGGGCGCCTGTTATTGTCGGAGCGGTT
GGAAGAGACAGCGTTTGCCCCTGGGCGTCCTGCTGCAAGTGTGTGTATGC
ATGTGTGTGTACTATGTAGATGTGCTCCCAAGCGTGAGCTGTGGCTAAGT
CACCCTGCGAGCGCTGCCGCCCCTCGCGCAGAGTAGATAGGGTCTGGCGG
CTGCAGCGCCGTCGCCGTCTCCGCCTGTGTCCTGGATGAGGTGGACGTGC
TGAGAGATGTACCATAGGCCACAGGGTGATATATACCTGACTTGTCAGAG
CTGCGCGACAGTATCAAGTAGAGCTATGGACTGTGTTTACGCTAGGTCCT
GGGGTGATGTACCCTGGAATTATCCCTGATGTCAGAGCTGGTCTGCAGTA
TCAAGTACAGCTGCAGACTGTGCCTGCTGTACAGTACATACCGACATGTT
CGTACTGTACTGCTGCAATGGTGTCCGGCATATTCGATCTCCGCCTCTCT
TCTGTTTGTTCTGTGTGGCTGTCGTCTTCTTCTTTCGGGTCGGCCCCTGC
TGTGCCCTCGCCGACACCTTCTCCGTCAGTCTGACACATACTACAGCGCC
ATACCTGCTGCCCGCTCTCCTGATTTTGTCTCATCCTCCTTCTCCTCCTC
CTCCTCCTCCCCTCTCTCTCCCTACGCCCCTCTCTCACTCTTCCTCCCTC
CCCCCCCCTCTCCCTCCTCGCTCCCTTCCTCCCCCATCCCCGCCCCCCCC
CCCCCCCCCCCGCCACACCTTCCTGGCTGCCGCACATTCTATTGCTCTCC
CCGCCTTGGGCGCCGCCGCTACCGCCGTGACCGAGCAGCAGTTTTTTGAG
AGAATGGGCCGTGGCTTGATCGACCGAGGGGACGGAATAGAACCGTTACT
CACGCAGGTGGCAGTGGAAGAACAAGACGCCTCCCCTGCCACAGAAAACC
GGTGAGTGTACTCTTTCTTTCCACTGCCCGCGCAGTATCGCGGCTGGCCT
TTTTTTTCACACCTCAAACGTGTCTCGTGGTCGATGGCCTGGAGACTGCA
GTACGCCGCAAAGCACAGCACGTGTACGAGTAGGCAATGTGCATGCTTCA
CACGTTCAGTGCATCCTGCTCTCATGACGGTTGCAGGGGGTGGGGGAGAA
GCGGGCGTGTGCCCGAACTCTCAACTTGCGCTCGAATTGTGACGAGAACA
ACGGGAACAATTGTGGTACCTATTCTCCATCTTGGCCTAGTTTACGGCCC
CGTTGGGCGTCCTGTCCCTGTGTCGTGACCACCCTGCTGCCCGCGGGCAC
CTGCTGCTGCCAGTGATGGAATATCTAAACAAATCAACTTATTTGTCGAC
AATACTGATCTATTTTGAGTGGTAGATAAGCGGCGAGTTCCAGGCCCCAT
GCCAAAAGGCTCGTCCCGAAACGGAACTCATCTATATGTCTATTGATAGT
GGATATTCGATAGTTTGGCCAACACTAAATCCGAGTAGTTAGTAGCGCCA
CCCACAAAATCAGCCGAGCCCGATAACTGTCTACTGATCGATATTCCATC
CCTGCCCGCTGCTGCACGCCTGGCGCCATTGGCCTGCTGCTCCCCACCCC
GCCCCCGCCCGGCACGTGGTCCAACACAGGAGCAGATTGGAGGGCGAAGC
AGCGGCGGGCGGAGAGGGGGTTGCGCCGGCAGACGCGCAGGGTCAAGGGG
CGATCGTGGGTTTTGTGACCTGCCGGGTGCGCAACAGTCTTAGGGGATGC
TTGGAAGTGTTCGCCTGACTACCGCTGACCTGTGCTACTACGAGAAGGAG
CAAAGACCAGGATCGTTCGGGTCCGGGGCATGCACAGAGACGTGAGTACA
CACCCACTGTAGTAGCATGGTCTCACTCGACCGGTTTATATGCCCTACAG
ATGGTCACATTACTCTACTGTATAGTACTCAGTACAGTACGTCGCACAAG
ACATGAGCAGGACCGGACAGGACAGGATGGTAAGTACCGGAGCAGTGTAC
AGTAGTATGGTACTCGAGTACGAGTCGTACAATGCACTACAACACAGTAC
AGCCCAGAACGGCCCAGAACAGTACAGTCCAGTACAGTACAGTAGAGGAC
TCGAGTACTACAGTACTCGTACAGCACATTGCTTGAGCCGAGCAGCGAAC
AGGACAGGACGGGAAGTAACTGAGCAATATACAGCAGTGCAGTACTCGAG
TACTCGAGTACGAGTCGTACAAAACAGTACAGCACAGTACAGCCCAGAAC
GGTCCAGAACAGTACAGTACAGTACAGCAGAGAACCCGAGTAGTAGCATT
ACTCGAGCAGAGTACTGAACGCGCAGTGTATCTCATCCTGCCCTCACCCC
CTCTCCCGCCTCCCCCCAGCTCTTTTCTCTCCCCCCTCCTTTTTTGTTTT
CGGTTCGTTGATGTGATTATCACTATTACTTCCACGTATACGAACGCTCA
ATCCTTTAATGGGATTACCACTAGTACGGGAACACTCAATCTCACACACG
TGCGATGCACCTCGTTACAATTTATATTAATCACCCCTCCGCACCGCCCC
CCCTCCCATGCCCGTGCCCTTCCCTCTGAGGCCAGGTGGTGCCCCTGCAG
CGCTGCGAAGAGGCGCCGTACTTGCCGCCGCAGCGCCGCCCCTTTGGCCG
CCCAGACTTGCTGCACATCGTTACGCTGGGGACAGAGGAGTCCCACCGGG
GAAAGGCGAGGGAGCAGCGCACAATTTGCCAGTGGTGGAATATCTATGCA
AATCAACCTATTTATTGACAGCACGGATTTTAAAATTGGTTTGATGAATG
CGAGTTCCGGGCCCCGTCCCAACAACCTAAGGTGGGGACCTCACCAGAAG
CCCTTCTTTTCACCCGCAGGGCAC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig85:99981..103104- >mRNA_S-ischiensis_contig85.20114.1 ID=mRNA_S-ischiensis_contig85.20114.1|Name=mRNA_S-ischiensis_contig85.20114.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=768bp|location=Sequence derived from alignment at S-ischiensis_contig85:99981..103104- (Schizocladia ischiensis KU_0333)
ATGCTTGGAAGTGTTCGCCTGACTACCGCTGACCTGTGCTACTACGAGAA
GGAGCAAAGACCAGGATCGTTCGGGTCCGGGGCATGCACAGAGACATGCT
TGGAAGTGTTCGCCTGACTACCGCTGACCTGTGCTACTACGAGAAGGAGC
AAAGACCAGGATCGTTCGGGTCCGGGGCATGCACAGAGACGTGGTGCCCC
TGCAGCGCTGCGAAGAGGCGCCGTACTTGCCGCCGCAGCGCCGCCCCTTT
GGCCGCCCAGACTTGCTGCACATCGTTACGCTGGGGACAGAGGAGTCCCA
CCGGGGAAAGGCGAGGGAGCAGCGCACAATTTGCCAGTGGTGGAATATCT
ATGCAAATCAACCTATTTATTGACAGCACGGATTTTAAAATTGGTTTGAT
GAATGCGAGTTCCGGGCCCCGTCCCAACAACCTAAGGTGGGGACCTCACC
AGAAGCCCTTCTTTTCACCCGCAGGGCACGTGGTGCCCCTGCAGCGCTGC
GAAGAGGCGCCGTACTTGCCGCCGCAGCGCCGCCCCTTTGGCCGCCCAGA
CTTGCTGCACATCGTTACGCTGGGGACAGAGGAGTCCCACCGGGGAAAGG
CGAGGGAGCAGCGCACAATTTGCCAGTGGTGGAATATCTATGCAAATCAA
CCTATTTATTGACAGCACGGATTTTAAAATTGGTTTGATGAATGCGAGTT
CCGGGCCCCGTCCCAACAACCTAAGGTGGGGACCTCACCAGAAGCCCTTC
TTTTCACCCGCAGGGCAC back to top
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