mRNA_S-ischiensis_contig84.20087.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: D7G2K6_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K6_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.670e-40 Identity = 84/188 (44.68%), Postives = 117/188 (62.23%), Query Frame = 2
Query: 449 YPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVCVAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIA 1012
YPGLR + + PP+YV+DDFFS ECD+L++ N + S G+ +E + S +A +D+P+ K+ AL G E+L QV RY + H DA DL++ RR A GQR +VLVYLNDV SGG T FP++ ++VQPR+G AVVFFPA +DG LD +H+AE A+DTK+++
Sbjct: 91 YPGLRNLRETPPLYVVDDFFSGPECDALIALAG-NYMIVSPVVGAGAGEV---SESRTSSSCFLAREDLPTVCHKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVS 274
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A6U0TVS1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TVS1_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.320e-40 Identity = 84/196 (42.86%), Postives = 118/196 (60.20%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVC-VAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIA 1012
Y+ ++ YPGLR ++ PP++ +D+F + AECD L+ + S + GK + S C +A +D+P + RK+ L G ++ QV RYL H DA DLSS RR A GQR +++LVYLNDV +GG T FPR+N++VQPRRG A+VFFPA VDGTLD + +H+A AVD KY++
Sbjct: 101 YNGVNPEYPGLRVVNQNPPIFAVDNFLTPAECDFLIYAAQ-----DSLGPAPVVGKGSGEVSSSRSSSTCYLAREDLPGYIRKVTLLTGKPFQHCELPQVGRYLPTQQYLQHFDAFDLSSEDGRRFASNGGQRTITILVYLNDVSTGGNTVFPRLNIQVQPRRGMALVFFPATVDGTLDKMTLHAALPAVDVKYVS 291
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A7S4N7N8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7N8_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.350e-38 Identity = 86/220 (39.09%), Postives = 124/220 (56.36%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVCVAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIALALLTRVPREEAEGG*PRRKRARKF 1087
++ ++ PGLR + PPV+ +DDF S AECD L+ + L ++ G A + S +A +D+P + K+ AL G + QV RYL + H DA DL + RR+A + GQR ++VLVYLNDVE+GG T FP + L V+P+RG+AVVFFPA VDG LD +H+A AVD KY++ + R+ A G P ++ +F
Sbjct: 1 FNGVNPDSPGLRVLSSDPPVFAVDDFLSPAECDFLIHAA--SDALQTAPVVGRGGGEVSQAR--TSSTCFLAREDLPEYVAKVSALTGKPPGHCELPQVGRYLQSQHYQQHYDAFDLGTDDGRRVASKGGQRTVTVLVYLNDVENGGETAFPELKLAVKPKRGKAVVFFPATVDGYLDQRVLHAATPAVDVKYVSQVWI----RQGAHDGVPSKRLGPEF 212
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A7S2UA87_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA87_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.580e-38 Identity = 82/196 (41.84%), Postives = 116/196 (59.18%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVC-VAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIA 1012
Y+ ++ SYPGL ++ PPV+ +D+F S ECD L++ L S A + GK + S C +A +D+P + K+ AL G E+ Q+ RYL H DA DL RR A GQR ++VL+YLNDV +GG T FP +NL V+PRRG A+VFFPA +DG LD +A+H+A A+DTK+++
Sbjct: 52 YNGVNPSYPGLHVLNSSPPVFCVDNFLSPEECDFLIASS-----LDSFAPAPVVGKGGGEVSETRTSSTCYLAREDLPLYMNKIMALTGKPLEHCELPQIGRYLPSQKYLQHFDAFDLGDEHGRRFASNGGQRTVTVLLYLNDVMNGGHTTFPSLNLEVKPRRGMAIVFFPATIDGYLDKMALHAALPAIDTKFVS 242
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A6U6I918_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6I918_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.930e-38 Identity = 87/220 (39.55%), Postives = 125/220 (56.82%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVCVAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIALALLTRVPREEAEGG*PRRKRARKF 1087
++ ++ YPGLR + PPV+ +DDF S AECD L+ + L ++ G A + S +A +D+P + K+ AL G + QV RYL + H DA DL + RR+A + GQR ++VLVYLNDVE+GG T FP + L V+P+RG+AVVFFPA VDG LD +H+A AVD KY++ + R+ A G P ++ +F
Sbjct: 141 FNGVNPDYPGLRVLSSDPPVFAVDDFLSPAECDFLIHAA--SDALQTAPVVGRGGGEVSQAR--TSSTCFLAREDLPEYVAKVSALTGKPPGHCELPQVGRYLQSQHYQQHYDAFDLGTDDGRRVASKGGQRTVTVLVYLNDVENGGETAFPELKLAVKPKRGKAVVFFPATVDGYLDQRVLHAATPAVDVKYVSQVWI----RQGAHDGVPSKRLGPEF 352
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A7S1UYE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYE3_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.380e-38 Identity = 86/196 (43.88%), Postives = 117/196 (59.69%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVC-VAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIA 1012
Y+ ++ YPGLR ++ PP++ +D+F S EC L+ + + F P+ + GK + S C +A +D+P + RK+ L G E+ QV RY H DA DLS+ RR A GQR ++VLVYLNDV GGAT FP +NL VQPRRG A+VFFPA VDG LD +A+H+A AVDTKY++
Sbjct: 177 YNGVNPHYPGLRLLNATPPIFAVDNFLSPFECQFLMEVAQ-DSFGPA----PVVGKGAGEVSPSRTSSTCYLAREDLPDYLRKVSLLTGKPIEHCELPQVGRYFPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVHQGGATSFPALNLDVQPRRGMAIVFFPATVDGYLDKMALHAANPAVDTKYVS 367
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A8J2S9J3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J3_9STRA) HSP 1 Score: 151 bits (382), Expect = 8.280e-38 Identity = 83/197 (42.13%), Postives = 117/197 (59.39%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSR-SQVC-VAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIA 1012
Y P++ +YPGL +H PPV+ + F S AECD L++ + P+ +G+ VSR S C +A +D+P+ K+ AL G E+L QV RY G + H DA D SSP RR A GQR +VLVYLNDV GG T F ++ L +QP++G A+VFFPA++DG LD +H+AE A+D K+++
Sbjct: 31 YLPLNPAYPGLTAVHTDPPVFTVAIFLSEAECDDLINSAQ-GHMTPAPVVGAGNGEVS-----VSRTSSTCYLAREDLPTICTKVCALTGCPVEHLELPQVGRYRGGEFYKAHYDAFDTSSPDGRRFAQNGGQRVATVLVYLNDVARGGCTSFSKLGLSIQPKKGTALVFFPASLDGMLDQHYLHAAEPALDLKWVS 221
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A7S2YBM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YBM7_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.270e-37 Identity = 82/196 (41.84%), Postives = 116/196 (59.18%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVC-VAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIA 1012
Y+ ++ SYPGLR ++ PP++ +D+F + ECD LV + + F P+ + GK + S C +A +D+P RK+ L G ++ QV RY + H DA DL + R A GQR ++VL+YLND E GG T FP +NL VQPRRG A+VFFPA VDG LD +A+H+A A+DTKY++
Sbjct: 19 YNGVNPSYPGLRVLNTSPPMFCVDNFLTPFECDFLVQVAQ-DSFGPA----PVVGKGVGEISPSRTSSTCYLAREDLPDLLRKVSLLTGKPMDHCELPQVGRYFASQQYLQHFDAFDLGTEDGLRFAANGGQRTVTVLIYLNDCERGGGTRFPALNLEVQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKYVS 209
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A7S2PKA3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKA3_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.470e-37 Identity = 79/196 (40.31%), Postives = 120/196 (61.22%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVC-VAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIA 1012
Y+ ++ +YPG++ ++ PP+Y +++F + ECD L+S + + P+ + GK + S C +A +D+PS+ K+ L G E+ QV RYL H DA DLS+ R A GQR ++VL YLN+V+SGG T FP +NL++QP+RG A+VFFPA VDG LD +A+H+AE A+D KY++
Sbjct: 137 YNGVNPNYPGVKLVNVAPPIYCVENFLTDYECDFLMSAAE-DSYTPA----PVVGKGNGEVSQSRTSSTCYLAREDLPSYLNKVSLLTGKPIEHCELPQVGRYLPSQQYLQHFDAFDLSNEDGVRFASNGGQRTVTVLTYLNNVQSGGHTSFPTLNLKIQPKRGMAIVFFPATVDGLLDEMALHAAEPAIDVKYVS 327
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Match: A0A7S3KY14_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY14_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.610e-37 Identity = 82/196 (41.84%), Postives = 119/196 (60.71%), Query Frame = 2
Query: 428 YHPIDQSYPGLRQIHDQPPVYVIDDFFSSAECDSLVSRGRRNRFLPSSAYTDLDGKRQYDAEFVSRSQVC-VAWKDVPSFARKMEALAGASTENLHPVQVARYLSGMYMGLHSDAHDLSSPTERRMAMERGQRYLSVLVYLNDVESGGATCFPRMNLRVQPRRGQAVVFFPAAVDGTLDPLAVHSAEEAVDTKYIA 1012
Y+ ++ YPGLR +H+ PPV+ +++F S ECD L++ + F P+ + GK + S C +A +D+P RK+ L G ++ QV RY++ H DA DLS+ RR A GQR ++VL+YLNDV GGAT FP +NL VQP RG A++FFPA +DG LD +++H+A AVDTKY++
Sbjct: 187 YNGVNPHYPGLRVLHNSPPVFCVENFLSPHECDFLINAAH-DSFGPA----PVVGKGSGEISPSRTSSTCYLAREDLPDLMRKVTLLTGKPIDHCELPQVGRYMASQQYLQHYDAFDLSTEDGRRFASNGGQRTITVLIYLNDVHQGGATRFPALNLDVQPVRGMALIFFPATIDGMLDQMSLHAALPAVDTKYVS 377 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig84.20087.1 >prot_S-ischiensis_contig84.20087.1 ID=prot_S-ischiensis_contig84.20087.1|Name=mRNA_S-ischiensis_contig84.20087.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=347bp MYWKVAAGTMGAFVGLLLARAAPAGAHVRGEHGWSYSFVPSVRWRHGHAFback to top mRNA from alignment at S-ischiensis_contig84:612007..621627+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig84.20087.1 ID=mRNA_S-ischiensis_contig84.20087.1|Name=mRNA_S-ischiensis_contig84.20087.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9621bp|location=Sequence derived from alignment at S-ischiensis_contig84:612007..621627+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig84:612007..621627+ >mRNA_S-ischiensis_contig84.20087.1 ID=mRNA_S-ischiensis_contig84.20087.1|Name=mRNA_S-ischiensis_contig84.20087.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2082bp|location=Sequence derived from alignment at S-ischiensis_contig84:612007..621627+ (Schizocladia ischiensis KU_0333)back to top |