mRNA_S-ischiensis_contig84.20081.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: D8LKT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT8_ECTSI) HSP 1 Score: 183 bits (464), Expect = 8.060e-52 Identity = 128/346 (36.99%), Postives = 168/346 (48.55%), Query Frame = 1
Query: 10 VRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAE--------GDILPLNLAEGTAGSXXXXXXXXXXXXXXXXXXXXXXXTN----PAQXXXXXXXSQDGPEGGEGCQEPPPAPVAGNSGPQQPGTEQPRQEAESGLPIQDCGDDGEE-----------SSAAACR----------AKVCGLLVERGARRTWRRAPTGAQAALQVTIALLREEDGGRSFCTFSG 948
VR+ R DP MM RG+ L AR+G LR++D V CPR E+L WF+V MF++AC +HLQ + +MVD G+D F AV EA+HW+V+ + + FLV AGM QR D+RTPLH+A RGL+ A L+ELGADVNAVA+ GD++PL LAE A + A DG +G +E + E+ AE G + CG++ SS + CR A++C +LVERGARR WRRAP+ Q AL A+L E D GR+FCTFSG
Sbjct: 11 VRRERDSDPIKTELMMRRGQLLVRFAREGRLRDMDQVSRSCPRGEMLAWFTVRMFKEACAHNHLQTMRFMVDHGLDVEFHAVLEAVHWLVDGCDEEQDGIDVVPAIDFLVTEAGMPPDVQRKSDFRTPLHVAVRRGLFEAARRLIELGADVNAVAKMAPLGNAKGDVMPLTLAEEPAETDGFRATDDTSPEAGDDVATKGKAAEIAAGAAAVNRYHLTRNDGARDEQGVRE------------EDHDVERMSLAAERG---RQCGEETSHVGGVGARSPSPSSRSLCRRRWSRVMASRARICEILVERGARRGWRRAPSEEQVALDKKYAVLLEGDDGRNFCTFSG 341
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: A0A6H5L1X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X8_9PHAE) HSP 1 Score: 160 bits (405), Expect = 1.250e-42 Identity = 123/360 (34.17%), Postives = 162/360 (45.00%), Query Frame = 1
Query: 1 MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAE--------GDILPLNLAEGTAGSXXXXXXXXXXXXXXXXXXXXXXXTN-----PAQXXXXXXXSQDGPEGGEGCQEPPPAPVAGNSGPQQPGTEQPRQEAESGLPIQDCGDDGEE-------------------------------SSAAACRAKVCGLLVERGARRTWRRAPTGAQAALQVTIALLREEDGGRSFCTFSG 948
++RVR+ R DP RMM RGK L AR+G LR++D V S CPR E+L WF+V MF++AC + LQ + +MVD G+D F AV EA+HW+V+ + + FLV AGM QR GL+ A L+ELGADVNAVA+ GD++PL LAE A + A +G +G +E ++ E+ AE G + CGD+ S A RA++CG+LVERGARR WRRAP+ Q AL A+L E D GR+FCTFSG
Sbjct: 57 LSRVRRERDSDPIKTERMMRRGKLLVRFAREGRLRDMDQVSSSCPRGEILAWFTVRMFKEACTHNRLQTMRFMVDHGLDVEFHAVLEAVHWLVDGCDEEQDGMDVVPAIDFLVTEAGMPPDVQR--------------GLFEAARRLIELGADVNAVAKMAPLGNAKGDVMPLTLAEEPAETNGFRATDDTSPEARDDVGTEGQAAEIAAGASAVNGYYYLTRNNGARDEQGVRE------------EEHDVERMSLAAERG---RQCGDETSHVGGSGXXXXXXXXXXXXXXSPSSRSLCRRRWSRVTASRARICGILVERGARRGWRRAPSEEQVALDKKYAVLLEGDDGRNFCTFSG 387
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: D0MS03_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MS03_PHYIT) HSP 1 Score: 113 bits (283), Expect = 3.580e-26 Identity = 62/165 (37.58%), Postives = 100/165 (60.61%), Query Frame = 1
Query: 1 MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAEGDILPL 495
M R+ ++R+ DP +A ++A GK L D R+G+LR L ++L +++V MFR+AC G + ++++M+ G D S + + LH V+E+ + EA + L++FL+ AG+ V+ QR D T LH+A + LY +A +LV GADVNA+A D +PL
Sbjct: 13 MKRLEKLRERDPESAENLVANGKLLVDFVRNGNLRALQCAAEHLGEGQMLIFYAVRMFREACAGRRMDILQFMLLNGFDLQQSYMRDILHSVIENVDSPQSAEAVQPLIRFLLD-AGVDVNWQRKADLYTALHVACCKNLYPIAYLLVLYGADVNAIAADDSMPL 176
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: A0A6A3S9Q7_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S9Q7_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.480e-26 Identity = 62/168 (36.90%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 1 MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAEGDILPLNLA 504
M R+ ++R+ DP +A ++A GK L D R+G+LR L ++L +++V MFR+AC L ++ +++ G D S + + LH V+ES + +A + L++FL+ AG+ V+ QR D T LH+A + LY +A +LV GADVNA+A D +PL A
Sbjct: 13 MKRLEKLREQDPESATNLVANGKLLVDFVREGNLRALQCAAEHLEEGQMLIFYAVRMFREACALRRLDILRFLLFNGFDLQQSYMRDILHGVIESIHSPQSADAVQPLIRFLLD-AGVDVNWQRKSDLYTALHVACCKNLYPIAYLLVLFGADVNAIAVDDAMPLACA 179
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: W2QEL4_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QEL4_PHYPN) HSP 1 Score: 112 bits (281), Expect = 1.210e-25 Identity = 61/168 (36.31%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 1 MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAEGDILPLNLA 504
M R+ ++R+ DP +A ++A GK L D RDG+LR L+ ++L +++V MFR+AC L ++ +M+ G D S + + LH ++++ + +A + L++FL+ AG+ V+ QR D T LH+A + LY +A +LV GADVNA+A D +PL A
Sbjct: 13 MRRLEKLRELDPESAANLVANGKLLVDFVRDGNLRALECAAEYLEEGQMLIFYTVRMFREACATRRLDILRFMLLNGFDLQQSYMRDVLHSIIDNIDSPQSADAVQPLIRFLLD-AGVDVNWQRTSDLYTALHVACCKNLYPIAYLLVLFGADVNAIAANDSMPLACA 179
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: A0A5D6YHF8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YHF8_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.630e-25 Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 1
Query: 1 MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAEGDILPLNLAEGTAGS 522
M + ++R+ DP +A+ ++A GK L + G+LR L + +L ++S MFR AC L ++ +M G D T V + LH VVES + E+A+ LV+FL+ AG+ V+ QR D T LH+A + L+ +A +L+ GADVNA+A D +PL AE T GS
Sbjct: 32 MQLLERMRERDPESAVNVVANGKLLLEFTELGNLRALQCALDHMGEDRVLLFYSTRMFRAACARRRLDILRFMFTHGFDVTQVGVRDILHCVVESVEDEQSAESAQPLVRFLLD-AGVDVNCQRETDLFTALHVACRKHLFAIAYLLIIYGADVNAIAMHDEMPLTCAERTRGS 204
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: G4YE98_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YE98_PHYSP) HSP 1 Score: 110 bits (275), Expect = 6.410e-25 Identity = 61/168 (36.31%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 1 MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAEGDILPLNLA 504
M R+ ++R+ DP +A ++A GK L D +G+LR L + L +++V MFR+AC L ++ +++ G D S + + LH V+ES + +A + L++FL+ AG+ V+ QR D T LH+A LY +A +LV GADVNA+A D +PL A
Sbjct: 13 MKRLEKMREQDPESAANLVANGKLLVDFVHEGNLRALQCAAEHLEEGQTLIFYAVRMFREACASKRLDILRFLLLNGFDLQQSYMRDVLHGVIESIDSPQSADAVQPLIRFLLD-AGVDVNWQRKSDLYTALHVACCNNLYPIAYLLVLFGADVNAIAADDAMPLACA 179
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: A0A3R7KFT7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KFT7_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.740e-25 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 1 MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVA 474
M R+ ++R+ DP +A ++A GK L A+DG+LR L ++L ++ V +FR+AC L V+ +M+ G D S V + LH VV E +AA+ LV+FL+ AG+ ++ QR D T LH+A + LY +A +LV GADVNA+A
Sbjct: 13 MKRLERLREQDPQSAANLVANGKLLVQFAQDGNLRALQCAAEHLDEGQVLIFYVVRVFREACRAQRLDVLRFMLLNGFDLQQSCVRDVLHSVVGGIDSPESADAAQPLVRFLLD-AGVDINWQRKSDLYTALHVACRKNLYSIAYLLVLYGADVNAIA 169
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: A0A0P1A917_PLAHL (Ankyrin repeat-containing domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A917_PLAHL) HSP 1 Score: 109 bits (273), Expect = 1.930e-24 Identity = 60/156 (38.46%), Postives = 93/156 (59.62%), Query Frame = 1
Query: 31 DPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAEGDILPLN 498
DP +A ++A GK L ++ RDG+LR L V Q ++L +++V MFR+AC L ++ YM+ G D S + + LH ++E+ E + L++FL+ AG+ V+ QR D T LH+A + LY ++ +LV GADVNAVA D +PL+
Sbjct: 23 DPESAANLVANGKFLVNIVRDGNLRALMCAVEQLQEGQVLTFYAVRMFREACAIKRLDILHYMLQNGFDLQQSYMWDTLHSIIETVDSNHSAELVQPLIRFLLN-AGIDVNWQRKSDLFTALHVACCKNLYSISYLLVIYGADVNAVAADDAMPLS 177
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Match: A0A329SY44_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SY44_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.190e-24 Identity = 60/168 (35.71%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 1 MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLHWFSVNMFRKACEGHHLQVVEYMVDRGMDATFSAVGEALHWVVESSRPGEGTEAAESLVKFLVQGAGMFVSTQRAKDYRTPLHLAAERGLYRLAAVLVELGADVNAVAEGDILPLNLA 504
M R+ ++R+ DP +A ++A GK L D R+G+LR L ++L +++V MFR+ACE L ++ +M+ D S + + LH ++E+ + +A + L++FL+ AG+ ++ QR D T LH+A + LY +A +LV GADVNA+A D +PL A
Sbjct: 13 MKRLEKLRERDPESAANLVANGKLLVDFVRNGNLRALQCAAEHLEEGQVLIFYAVRMFREACETRRLDILRFMLLNSFDLQQSYMRDILHNIIENVDNPQSADAVQPLIRFLLD-AGVDINWQRKSDLYTALHIACCQNLYPIAYLLVIYGADVNAIAADDSMPLACA 179 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig84.20081.1 >prot_S-ischiensis_contig84.20081.1 ID=prot_S-ischiensis_contig84.20081.1|Name=mRNA_S-ischiensis_contig84.20081.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=317bp MARVRQVRQDDPTAALRMMARGKTLEDLARDGDLRELDYVVSQCPRLELLback to top mRNA from alignment at S-ischiensis_contig84:538338..539790+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig84.20081.1 ID=mRNA_S-ischiensis_contig84.20081.1|Name=mRNA_S-ischiensis_contig84.20081.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1453bp|location=Sequence derived from alignment at S-ischiensis_contig84:538338..539790+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig84:538338..539790+ >mRNA_S-ischiensis_contig84.20081.1 ID=mRNA_S-ischiensis_contig84.20081.1|Name=mRNA_S-ischiensis_contig84.20081.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1902bp|location=Sequence derived from alignment at S-ischiensis_contig84:538338..539790+ (Schizocladia ischiensis KU_0333)back to top |