mRNA_S-ischiensis_contig83.20025.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig83.20025.1
Unique NamemRNA_S-ischiensis_contig83.20025.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.20025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:550362..555648 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1206
Cds size1206
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817324.918224-CDS-S-ischiensis_contig83:550361..5505271622817324.918224-CDS-S-ischiensis_contig83:550361..550527Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 550362..550527 +
1695741027.7377405-CDS-S-ischiensis_contig83:550361..5505271695741027.7377405-CDS-S-ischiensis_contig83:550361..550527Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 550362..550527 +
1622817324.9340518-CDS-S-ischiensis_contig83:551588..5516921622817324.9340518-CDS-S-ischiensis_contig83:551588..551692Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 551589..551692 +
1695741027.7493207-CDS-S-ischiensis_contig83:551588..5516921695741027.7493207-CDS-S-ischiensis_contig83:551588..551692Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 551589..551692 +
1622817324.9468164-CDS-S-ischiensis_contig83:552199..5522891622817324.9468164-CDS-S-ischiensis_contig83:552199..552289Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 552200..552289 +
1695741027.758507-CDS-S-ischiensis_contig83:552199..5522891695741027.758507-CDS-S-ischiensis_contig83:552199..552289Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 552200..552289 +
1622817324.9598749-CDS-S-ischiensis_contig83:553079..5531661622817324.9598749-CDS-S-ischiensis_contig83:553079..553166Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 553080..553166 +
1695741027.7697957-CDS-S-ischiensis_contig83:553079..5531661695741027.7697957-CDS-S-ischiensis_contig83:553079..553166Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 553080..553166 +
1622817324.9714005-CDS-S-ischiensis_contig83:553801..5539381622817324.9714005-CDS-S-ischiensis_contig83:553801..553938Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 553802..553938 +
1695741027.7797344-CDS-S-ischiensis_contig83:553801..5539381695741027.7797344-CDS-S-ischiensis_contig83:553801..553938Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 553802..553938 +
1622817324.982856-CDS-S-ischiensis_contig83:554414..5545081622817324.982856-CDS-S-ischiensis_contig83:554414..554508Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 554415..554508 +
1695741027.7914965-CDS-S-ischiensis_contig83:554414..5545081695741027.7914965-CDS-S-ischiensis_contig83:554414..554508Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 554415..554508 +
1622817324.996386-CDS-S-ischiensis_contig83:555120..5556481622817324.996386-CDS-S-ischiensis_contig83:555120..555648Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 555121..555648 +
1695741027.8056407-CDS-S-ischiensis_contig83:555120..5556481695741027.8056407-CDS-S-ischiensis_contig83:555120..555648Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 555121..555648 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.20025.1prot_S-ischiensis_contig83.20025.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig83 550362..555648 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig83.20025.1

>prot_S-ischiensis_contig83.20025.1 ID=prot_S-ischiensis_contig83.20025.1|Name=mRNA_S-ischiensis_contig83.20025.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=402bp
KAGAGATVARANSGQANGSPSNSLAAAAANGGQVVLDEPWQPNEEDVAAI
ACFEIGCKKSAEAGMPPAGTPWPSSSGWNWETELLRVDREVRSRHPRAHR
SRGYLERLSGVLSLPVDRTRSTLIWLDRHAVSTGRQALFHKAREEFLEEV
ANLPVQPPGADGSTPAFEWSLGLRSRLHETFQAHEAWVEAANACRAATPG
QVREGMSKEGLEPLSMIKLTRGLVDELSSRWPSTAVAMTAKDLKKMLNLE
KRRVKAKEKNLNGGGGGGGGGGGGSGDTASTPGGGAAATAATAADERATP
VPQAAAPETPPGPPATTAAGASATTPVLVAAAATNTAAGPAKAAGRPAGA
GAGAGAGTPGLAKPRPRPKAGKPRGRPSSSAPPGPPRGTRFEAPPPFQQE
DF
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mRNA from alignment at S-ischiensis_contig83:550362..555648+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig83.20025.1 ID=mRNA_S-ischiensis_contig83.20025.1|Name=mRNA_S-ischiensis_contig83.20025.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5287bp|location=Sequence derived from alignment at S-ischiensis_contig83:550362..555648+ (Schizocladia ischiensis KU_0333)
AAGGCTGGAGCCGGGGCCACAGTGGCCAGGGCCAATAGTGGGCAGGCGAA TGGCTCCCCAAGCAATAGCTTGGCAGCAGCAGCGGCTAACGGGGGCCAGG TTGTGCTGGATGAACCGTGGCAGCCGAACGAGGAGGACGTTGCTGCCATC GCCTGCTTCGAGATAGGTGGGTTCAGGCCCGGTTAGGCTTCCACCGGGCT GCCCGCCCGCCCGACGCACCTGCCTGCCTGGACGCCCACAGCGGTAGCCC GCCCTCCCTTCCACCAGCGCTCCCCTTAGCCGTTTTACCCCTGCGTAGTT GGACTTACACACTAATACCCTGTGATTGTTCGGACCCCAGGGGTAAAAGG GTTACCCTTTTTGCTCCGGTTAGCGGAATCGGGCCGGTACTGGGCTCTTC GGCCGAATACTGTGTGTTATGTTACACGACGGGTACAATGCAATACATCA GACAGGAGCCACCGCGAGTGCAATAGTGCACTTACAATCCACAGCATGTG CCCTTCAATTTTTGCCGGGCCCCCTCCCTTGCAATCAATCCGTTTTCGTT TCTCCCGCGGGTGCGGGGCTGATGATGCACCCCGAGAGCAAGGGGCTCCC CAGTCAGCTGAGACTCTGGCTCCCTCGCCTGCCTTGCTCCTTGCGCCCCC TCCCTCAGCTCGGCCACTACCCTTGTGCCACGTCCCAACCCCCTCAGCCG TAGGCTCGGCTCGGCGGCGGCTGCTGCCCGCCGCTGCCGCTGCCATGGCC GCTGCAGCCGTACCCCTGCTGCATACTGAGCCCCCGCCATCAGTGATTGA ATATCTAAGCAAATCAACCTATTCATTGACAGTACTGATCTATTTTGAGT GGTAGATAAGCGGCGAGTTCCAGGCCCCGTGCCAAAAGGCGCGTCCCGAA ACGGGACTCAACGAAGCCCTTCTTCCCCTCGCATGGCAAAAACAAAATAA AAAAAAGAATCAACTGGGCGGGGCAGGGAAAAGGAAGGGGCTATATATCT ATCGATAGTCGATATTCCATAGTTGGACCCACGCTAAATCCAAGTAGCTA CTTAGTAACGCTACCCACAAATCAGTCGAGCCCAATAACAATCTACTGAT CGATATTCCATCACTGCCCGCCATGCCGTCCTGCCCCCCCCGGCCCACCC GCGCCCCTCCTTCGACGGCGGCCGCCATGTTTTTTTTTACCCCCTGGGTG CCTGCGGGCGGCGGCGTACCACGCCAGGGTGCAAAAAGTCGGCAGAGGCG GGCATGCCTCCCGCCGGCACGCCGTGGCCGTCATCGTCCGGGTGGAATTG GGAGACGGAGCTGCTCCGCGTGGACCGTGAGGTGGGGGGGCTGTACGTAC AGCGGTGATAGTACGCCAGGGCATACCGCAATCGTCGGAGAGATCTTGCC CCCCCATGCCAATTTTCGGGAGAACTTTTCTCGCCGAATACTGGTCGGAT TCGCGCAGGAAAACTCGGAAAATCTCCCTCAGGATCTGGGGAAAGTTTTC CGAGAGTTTGCGGGACAATTCAGGGCCTTCCCATGTAGAAATATTCGCCC GAAAATTGGCCCTTGGGGGCAAAATCTCTCCGACGACTACGGTACGTGGA GAACAGGTATGTAACACGGTACAGTGCCTGTGCCTATGTGCTAAGTCCAT CGAACCGTCTGCTTTTCTCCCCCCCGCCTCCACCCTGCCCTTGGTCCTTC TCTCCGTCGGATCATTCCTTCCCCTCCCCCTCCCCCTCCTCGTCCTTTGT CTCCCCTTCTTTTCATCCCCCTCCTCCCCCCCTCCCACGGCCCCTTCCCC CCCCACCCTGCGTGCCCCTCCTCCTCCCTCCCCACCAGGTCCGCAGCCGA CACCCACGTGCCCACAGGTCCCGCGGCTATCTGGAGCGCCTCTCGGGGGT ACTGAGCCTGCCCGTGGACAGAACAAGGGTGCGTACCATAATCGTCGGGA GAGATCTTGCCCCCCCATGCCAATTTTCGGGAGAACTTTTCTCGCCGAAT ACTGGTCGGATTCGCGCAGGAAAACTCTGAAAAAACGTCGCGTAGGACCT GGGGAACTTTTCCGAGGAGTTTCGGGACGGTTCAGGACCTTCCCGGCGAG AAATATTCCCCCGAAAATTGTCCCGTGGGGGGCAAGATCTCTCCGACGAT TGCGGTACCCCTCGCATTTGGCTCGTCAGTCTGTGCGCTGCAGGGGCTGG ACAGAGCGCCGCCCGCCTGCCCCGTTATCTCTTGCTCAAGTTTGCCCTAC CCATAGGCGGGTGGCGCATACGGTAGGCAGTGGGCCCTTTCACGTGTCGG TAGTAGGTGCCAGCATTTCAGCGTGGCATGCTGTCCAGGATTGAGCGGAT CGCGTTTGGTGATTGCGTGTCACATACTCCCAAGTACTTCCAAGTAGTTG GAAGTACAGTAGATGCACTTTGTAATAGTGCATGACCGCCTGGCCTTCTG TTCGCTACCCCCCAACTCCCTTCCCTTCCCCTCCCCTCCCCTCCCCCCTG CCCTCCTCCCCTCACCCCTGGCTCTCTTGGCTCCCCGCGCCACACCGCCC CGGCTCCGGGTACGTACGACACGTGGGCTCATGCGTCCACCATGCCCCCG GCCCCAACCCTGCCCCACCCGATTTGCCACTTCGGTCTGTCGGGCGGCGG CATGTGATGGCGGCGGTGCAATCGGGGCTGACACCATCAATAACATGCCG TGGGGGGCTGATGGGCAGTCCACTCTGATTTGGCTCGACCGCCACGCCGT CTCCACTGGGCGGCAAGCGCTCTTCCACAAGGCGCGCGAGGAGTTCCTAG AGGAGGTGGGTTGGCCTGTGATTCATATAAACTGTAATGAGGTACAATCG CACGTGTGTGAGATTTTTAGGTTCTTTTCTTGATTGTTGTGCCCTACGGG TTAGAAGAGGGCTTCTGGCGAGGTCCCCACCTTAGGTTGTTGGGACGGGG CCCGGAACTCGCATGCCATCAACATAATTGAACAAATTGTAATGAGGTAC AATCGCACGTGTGTGGGATTGGGTGTTCTCGTGTTAGTGGTTGTCTCATT TAAAAATTGAGTGTTCTCGTATTAGTGACTACTTCGCACTTCGAAGTATG TCGATAGAGTGATGTATCTATTCAGGGTCTCTGCGTGGTCAACGGCCATA CGGCTACGGCAACTCGTGCCTCCCCCCCCCCCCCTCTTCCCAACCACAGA GGTATAGTGCTCCGGCCCGTAGGGTTATACAGGTGGGAACACATTTCATT TGTTCGTACGGCCATCTATATTGTACTTCGAAGTACGCGAGTACCTATTT ACGAGTAAGTACTTTGGTGTGTTGTGTGGTCAATGGTCTCGGGACTAGGT ACGGCAAGCACCTCATGGGTACATGTATGTTGTTCCAATGCATCTGTTGC GACGTTCAATATTCTACACGCCTCCACCGCCCGCCTGCAGGTGGCCAATC TCCCCGTGCAACCCCCAGGCGCCGACGGCAGCACCCCGGCCTTTGAGTGG AGCCTGGGTCTCCGCTCCAGGCTGCACGAGACCTTCCAGGCCCACGAGGC GTGGGTGGAGGCCGCCAACGCGTGCAGGTTGGCATTTGTGCTACTGTACT ACTGTACCCAAGTGTAGTGTACTGTACAAGGCCGGAAAGTTCATTTTAAT GCCCTGTCCCGCGGGACCTCACGTGAAGAGGTAAAAAAACCTTCCTTCGC CCGCTACTGTAGTGTGGTGCGATGTGATGTGCGCTCTAATTTACTTCAAA GTACTGCAGTGTGACCTCACATCACATCACATGAGTCAAACTTGGGACCT CACCTGAAGAGGTAAACCCTTCCTTCACTCACTACGGTAGTGTGATGTGA TGTGATGTGCGCTCTAATTTACTGTAGTGTGACATCGCCTCACATCACAT CACATCGCATCAGTCAAACTTGGGACCTCACCTGAAGAGTTAAACCCTTC CTTCGCTCGCAGAATCTGCAGACGTAAGTGGTCAGCACTTCAAAAAGTAT ACGCCGGTCTCCCAAACGCGCTCGCCGCCCTCTGCCCCCCCGCGCCTTGG CAGGGCGGCCACCCCCGGGCAAGTAAGGGAGGGTATGTCCAAGGAGGGCT TGGAGCCGCTCAGCATGATCAAGCTCACCAGGGGTCTGGTGGACGAGGTG TGCGTGCGTGTGTGCGTGCGTGCGATTGTGTTTGCGACGTGGTATGATTG GCGCTGCATGCACTACTAAATGTCTCTTCTTCCCCCTCGCTTGTTTGCTT GTCTTGTTGCAACAGACTGTTGCTTCCAAGTAAATTGACCTACAGTACAA TAACATTGCATCATATGATATCATCGGCATGCGCGCATGCACATGTGCGT GAGTGCGTGCGTGCGTGCAGATGTGAGCGTGCGGTTAAACGGTTTTGTGC CGGGTGGCGCGGGGGGGTGTGGGCACGGGCGTGTGCGTGGGCGCCTGCAC CCAGCCGTAGCCGCGCCCTCAACCTTAACCGCGCCCTTCCACCCAAGTGC TTTGGCGCGTGATTACCTCGATGCCAGAGCTGCAGTTTCAGCTGCAGCCG ATGCCTTCATGAAGTGACATAACGTAAAGCAGCAGCTCGAAGCATCTACG TACTTCCGTAAGTACTACAGTACGTATGTCACAGAACACACCACATCACA CATCTAGGGTCTCTCTCCAATGCGGAACATGTGTCGAATGTTCATACGGA AACGACAAGCAACGTGACCCCCCCGCCGCCCCGCTCCCCACTGGCCCTGC CGGGCACAGCTGAGCTCAAGGTGGCCCAGCACCGCCGTGGCCATGACCGC CAAGGACCTCAAGAAAATGTTGAACCTGGAGAAGCGGCGCGTCAAAGCCA AGGAAAAGAACCTCAACGGCGGAGGGGGCGGCGGCGGCGGCGGCGGCGGC GGCAGTGGTGACACGGCCAGCACCCCGGGCGGCGGAGCCGCCGCCACCGC CGCCACCGCCGCCGACGAAAGGGCCACCCCCGTGCCTCAGGCGGCGGCGC CGGAGACACCGCCGGGGCCCCCGGCAACAACAGCGGCAGGAGCTTCTGCT ACTACGCCGGTGTTGGTAGCGGCGGCGGCGACGAATACGGCCGCTGGCCC GGCAAAGGCGGCGGGGCGGCCAGCAGGGGCAGGGGCAGGGGCAGGGGCAG GGACCCCGGGGCTGGCCAAGCCCAGACCAAGGCCCAAGGCTGGGAAGCCC CGGGGCCGGCCTTCTTCCTCGGCGCCCCCCGGGCCCCCCCGGGGGACTAG GTTCGAGGCCCCGCCGCCGTTCCAGCAGGAAGACTTC
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Coding sequence (CDS) from alignment at S-ischiensis_contig83:550362..555648+

>mRNA_S-ischiensis_contig83.20025.1 ID=mRNA_S-ischiensis_contig83.20025.1|Name=mRNA_S-ischiensis_contig83.20025.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2412bp|location=Sequence derived from alignment at S-ischiensis_contig83:550362..555648+ (Schizocladia ischiensis KU_0333)
AAGGCTGGAGCCGGGGCCACAGTGGCCAGGGCCAATAGTGGGCAGGCGAA
TGGCTCCCCAAGCAATAGCTTGGCAGCAGCAGCGGCTAACGGGGGCCAGG
TTGTGCTGGATGAACCGTGGCAGCCGAACGAGGAGGACGTTGCTGCCATC
GCCTGCTTCGAGATAGAAGGCTGGAGCCGGGGCCACAGTGGCCAGGGCCA
ATAGTGGGCAGGCGAATGGCTCCCCAAGCAATAGCTTGGCAGCAGCAGCG
GCTAACGGGGGCCAGGTTGTGCTGGATGAACCGTGGCAGCCGAACGAGGA
GGACGTTGCTGCCATCGCCTGCTTCGAGATAGGGTGCAAAAAGTCGGCAG
AGGCGGGCATGCCTCCCGCCGGCACGCCGTGGCCGTCATCGTCCGGGTGG
AATTGGGAGACGGAGCTGCTCCGCGTGGACCGTGAGGGTGCAAAAAGTCG
GCAGAGGCGGGCATGCCTCCCGCCGGCACGCCGTGGCCGTCATCGTCCGG
GTGGAATTGGGAGACGGAGCTGCTCCGCGTGGACCGTGAGGTCCGCAGCC
GACACCCACGTGCCCACAGGTCCCGCGGCTATCTGGAGCGCCTCTCGGGG
GTACTGAGCCTGCCCGTGGACAGAACAAGGGTCCGCAGCCGACACCCACG
TGCCCACAGGTCCCGCGGCTATCTGGAGCGCCTCTCGGGGGTACTGAGCC
TGCCCGTGGACAGAACAAGGTCCACTCTGATTTGGCTCGACCGCCACGCC
GTCTCCACTGGGCGGCAAGCGCTCTTCCACAAGGCGCGCGAGGAGTTCCT
AGAGGAGTCCACTCTGATTTGGCTCGACCGCCACGCCGTCTCCACTGGGC
GGCAAGCGCTCTTCCACAAGGCGCGCGAGGAGTTCCTAGAGGAGGTGGCC
AATCTCCCCGTGCAACCCCCAGGCGCCGACGGCAGCACCCCGGCCTTTGA
GTGGAGCCTGGGTCTCCGCTCCAGGCTGCACGAGACCTTCCAGGCCCACG
AGGCGTGGGTGGAGGCCGCCAACGCGTGCAGGTGGCCAATCTCCCCGTGC
AACCCCCAGGCGCCGACGGCAGCACCCCGGCCTTTGAGTGGAGCCTGGGT
CTCCGCTCCAGGCTGCACGAGACCTTCCAGGCCCACGAGGCGTGGGTGGA
GGCCGCCAACGCGTGCAGGGCGGCCACCCCCGGGCAAGTAAGGGAGGGTA
TGTCCAAGGAGGGCTTGGAGCCGCTCAGCATGATCAAGCTCACCAGGGGT
CTGGTGGACGAGGGCGGCCACCCCCGGGCAAGTAAGGGAGGGTATGTCCA
AGGAGGGCTTGGAGCCGCTCAGCATGATCAAGCTCACCAGGGGTCTGGTG
GACGAGCTGAGCTCAAGGTGGCCCAGCACCGCCGTGGCCATGACCGCCAA
GGACCTCAAGAAAATGTTGAACCTGGAGAAGCGGCGCGTCAAAGCCAAGG
AAAAGAACCTCAACGGCGGAGGGGGCGGCGGCGGCGGCGGCGGCGGCGGC
AGTGGTGACACGGCCAGCACCCCGGGCGGCGGAGCCGCCGCCACCGCCGC
CACCGCCGCCGACGAAAGGGCCACCCCCGTGCCTCAGGCGGCGGCGCCGG
AGACACCGCCGGGGCCCCCGGCAACAACAGCGGCAGGAGCTTCTGCTACT
ACGCCGGTGTTGGTAGCGGCGGCGGCGACGAATACGGCCGCTGGCCCGGC
AAAGGCGGCGGGGCGGCCAGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGA
CCCCGGGGCTGGCCAAGCCCAGACCAAGGCCCAAGGCTGGGAAGCCCCGG
GGCCGGCCTTCTTCCTCGGCGCCCCCCGGGCCCCCCCGGGGGACTAGGTT
CGAGGCCCCGCCGCCGTTCCAGCAGGAAGACTTCCTGAGCTCAAGGTGGC
CCAGCACCGCCGTGGCCATGACCGCCAAGGACCTCAAGAAAATGTTGAAC
CTGGAGAAGCGGCGCGTCAAAGCCAAGGAAAAGAACCTCAACGGCGGAGG
GGGCGGCGGCGGCGGCGGCGGCGGCGGCAGTGGTGACACGGCCAGCACCC
CGGGCGGCGGAGCCGCCGCCACCGCCGCCACCGCCGCCGACGAAAGGGCC
ACCCCCGTGCCTCAGGCGGCGGCGCCGGAGACACCGCCGGGGCCCCCGGC
AACAACAGCGGCAGGAGCTTCTGCTACTACGCCGGTGTTGGTAGCGGCGG
CGGCGACGAATACGGCCGCTGGCCCGGCAAAGGCGGCGGGGCGGCCAGCA
GGGGCAGGGGCAGGGGCAGGGGCAGGGACCCCGGGGCTGGCCAAGCCCAG
ACCAAGGCCCAAGGCTGGGAAGCCCCGGGGCCGGCCTTCTTCCTCGGCGC
CCCCCGGGCCCCCCCGGGGGACTAGGTTCGAGGCCCCGCCGCCGTTCCAG
CAGGAAGACTTC
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