mRNA_S-ischiensis_contig83.19965.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig83.19965.1
Unique NamemRNA_S-ischiensis_contig83.19965.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: D7FZY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY0_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.270e-88
Identity = 139/246 (56.50%), Postives = 176/246 (71.54%), Query Frame = 1 
Query:  334 MEKELNSSDSSQAFVGYAPLEQDGENEVNLRYSLQCDLGELFKGEKVEAASGGWQGLMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLL-GSGEGGGRS---ARRAAAAGSAVFGATALSF 1059
            ME EL  SD+SQAF+GYAP+E+ G+NE+ L Y+L CDL EL     V       + L  TG+ W+ TGSVV AS GR DI GWC  PGAL  WN+FRRG A           PD +L+HSSCLMCVSCHP  PA++AAGSFNGEVVVWDT++D+PL+A T+I++L+HREPV  ++WV+N ++++YRLA+V+ DGK+LFWSLKNNL+CPVEGY +   G  GGR    ARR++A G    G T LSF
Sbjct:    1 MEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDLSELLSATGVGGTGSSSKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHA-----PDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDEYRLAAVSGDGKLLFWSLKNNLQCPVEGYRVPAEGADGGRDGTRARRSSARGRTA-GCTTLSF 240
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: A0A835ZBI6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI6_9STRA)

HSP 1 Score: 221 bits (562), Expect = 5.460e-64
Identity = 115/228 (50.44%), Postives = 147/228 (64.47%), Query Frame = 1 
Query:  334 MEKELNSSDSSQAFVGYAPLEQDGENEVNLRYSLQCDLGELFK--GEKV--EAASGGWQGLMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKE--EDYRLASVAADGKILFWSLKNNLECPVEGYLLGSGEGGGR 999
            ME  L S+ +S AF  YAP   +  + V L   LQC+   L +  G+    E++  G Q L  TG+SWN+TGS + AS GR ++ GWC+ PGAL  WN F+R   S          PDV+ +HSS LMC+ CHP  PA+VAAGSFNGEV+VW+TA DDPL+ V++I++ FHREPV +VAWVY+M E  E YRL S + DGKIL WSL+N L  PVEGY L +   G R
Sbjct:    1 MEGLLQSNATSVAFKEYAPAPDEDSSHVKLHAILQCNTEALLRARGQSAMRESSQRGVQSLQCTGVSWNSTGSTLAASYGRLNVAGWCNEPGALACWNAFKR---SSSADEAATLTPDVVFDHSSYLMCLCCHPTHPAIVAAGSFNGEVLVWNTAADDPLLGVSQIDDYFHREPVTQVAWVYDMDEQGEGYRLVSTSGDGKILCWSLRNRLAYPVEGYALLTAPAGNR 225
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: A0A7S2UTZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTZ9_9STRA)

HSP 1 Score: 207 bits (527), Expect = 6.000e-63
Identity = 89/158 (56.33%), Postives = 124/158 (78.48%), Query Frame = 1 
Query:  502 LMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLL 975
            L  TG+ W+ATGSV+VAS GR D+ GWC  PG L AWN+F+R            A+P+ + EHSSCLMCV+CHP +PA++AAGSFNGEV+VWDTA ++PL+A T+I++ FHREP+ KVAWVY+++EE+Y+++SV+ +GK+L+WSLK  L+ P +G+LL
Sbjct:   20 LQCTGVGWSATGSVLVASFGRHDLCGWCDIPGVLCAWNIFQR-------RGFDPAKPEFVYEHSSCLMCVACHPTKPAIIAAGSFNGEVLVWDTAAEEPLIASTKIDDYFHREPIVKVAWVYDLREEEYQVSSVSGEGKVLWWSLKTGLKNPSKGFLL 170
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: A0A7S1CG11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG11_9STRA)

HSP 1 Score: 213 bits (542), Expect = 7.880e-61
Identity = 134/309 (43.37%), Postives = 175/309 (56.63%), Query Frame = 1 
Query:  154 QTDDVLLYDEETQTVDARVQETQTED---DAGCRASASALLGFEDWRDMPHDLERFLLRAGARMEKELNSSDSSQAFVGY---APLEQDGENEVNLRYSLQCDLGELFKG-EKVEAASGGWQGLMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLLGSGEGGGRSARRAAAAGSAVFGATALSF 1059
            QTD V   +   QT+  +  ETQTE    D G  A     L  + WR    D+  FL R    M+ +L+ + +S AF  Y   A  E D    V++  +      +  +G E  E        L  TG+SW++TGSVV AS G QD  GWC     +  WNVF +G+ +G         PDVLL+  SC+MCV+CHP RP+VVAAG+FNGEVVVWDT + +PLVA +RI++ FHREPV +V W+Y+M    Y LASV+ADGK+LFW+L N L  PV+G+ L  G      ARR     S V G TAL+F
Sbjct:   39 QTDPVSFAEASAQTLVPQSIETQTEPLEADEGKEAD----LSIDGWRP-DADVAEFLERVAPIMDMQLSRNAASHAFDDYDALAATEDDDPEVVHVLSTTFLQPADAVEGGEAKEGTEDVEVTLPCTGVSWSSTGSVVCASFGFQDHSGWCTHRAGVGTWNVFGKGLRAGT--------PDVLLDTMSCVMCVACHPERPSVVAAGTFNGEVVVWDTNEAEPLVAQSRIDDYFHREPVTRVEWLYDMFARAYMLASVSADGKVLFWTLANKLAYPVQGFRLAPGRRHRPRARRERPGASDVVGGTALAF 334
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: A0A485LGC1_9STRA (Aste57867_20716 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGC1_9STRA)

HSP 1 Score: 195 bits (495), Expect = 9.520e-54
Identity = 135/339 (39.82%), Postives = 181/339 (53.39%), Query Frame = 1 
Query:   79 FRDVDFGEVDFPSLKAEVENREKLTQTDDVLLYDEE--TQTVDARVQETQTE--DDAGCRASASALLGFEDWRDMPHDLERFLLRAGARMEKELNSSDSSQAFVGYAPLEQDGENEVNLRYSLQCDLGELFKGEK--------VEAASGGWQGLMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLLGSGEGGGRSARRAAAAGSAVFGATALSF 1059
            F+D   G   F S KA  +N  K   TD V +  E   TQT  A    +QTE  + AG   +A+         ++  D++ FL +AGARM +E+N       F      ++  E       +L  D    FK           V   S G Q L VTG+SWNATGSV+  S GR D  GWC +  AL  WN+F   + +        A+P V+LE SS LMCV+ HP  PAVVAAGSFNGE+ VW+T+ ++ LVA + I + FHREPV K+AWV++    +Y +ASV  DGK+L W LK+ L  PVEG+LL +     +S ++  AAG  V G  +L F
Sbjct:    3 FQDAHAGSCSFRS-KASAKNPTKDAMTDAVQVDFESISTQTSVAVDNSSQTEFIERAGGNQAAA---------EVTEDVQSFLTKAGARMLEEMNKGGQWAIFNELQQDDESDEKGATKILTLAFDFFSHFKPAATADAATAAVSKQSAGLQ-LQVTGVSWNATGSVLAVSYGRFDHSGWCDYRSALCLWNIFSADLNA--------AKPHVVLETSSGLMCVAHHPTNPAVVAAGSFNGEIYVWNTSLEETLVATSGIGDYFHREPVTKLAWVFDTPSREYHIASVGGDGKVLLWQLKDKLAFPVEGFLLKT-----KSTKQPKAAGLVVGGNPSLDF 317
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: G4Z490_PHYSP (WD-40 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z490_PHYSP)

HSP 1 Score: 194 bits (494), Expect = 1.670e-53
Identity = 124/318 (38.99%), Postives = 174/318 (54.72%), Query Frame = 1 
Query:   79 FRDVDFGEVDFPSLKAEVENREKLTQTDDVLLYDEETQTVDARVQ-ETQTEDDAGCRASASALLGFEDWRDMPHD-LERFLLRAGARMEKEL-NSSDSSQAFVGYAP-LEQDGENEVNLRYSLQCDLGELFKGEKVEAASGGWQG-----LMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLLG-SGEGGGRS 1002
            F+DV  G   F + + + +  E  +QT ++ ++DEE QT DA     TQT  +    A         D ++     +   L   G  M +E+  +  +S  F G    LE+  E  V+  + LQ D    F+ ++  A S G        L  TG+SWNATGSV+  + GR D  GWC++  AL  WNVF+  +           +P ++LE SS LMCV+ HP+ P++VAAGSFNGEV VWDT   D     + I + FHREPV KVAWVY+++  DY +ASV+ DGKILFW +K+ L  PVEGY++   G  GG+S
Sbjct:    2 FQDVTLGSARFKAKRTK-QVAEVFSQTVEIEMFDEEAQTDDATASASTQTGQEKQAPARGKGKDAASDTQEEDQRRVSECLQNVGGLMLREMAKNGHTSSCFSGLERYLEESEEKNVSKLFRLQFDYDTYFQPQQATATSNGAGAPSSLRLSCTGVSWNATGSVIAVAYGRFDHSGWCNYRSALCLWNVFQSDL--------NPQKPSLVLETSSGLMCVAFHPQSPSIVAAGSFNGEVFVWDTEPVDYRFFSSGIGDYFHREPVTKVAWVYDIQTNDYNVASVSGDGKILFWRVKDKLAFPVEGYVMHLPGANGGKS 310
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: A0A2P4YCZ2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCZ2_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.480e-52
Identity = 121/318 (38.05%), Postives = 174/318 (54.72%), Query Frame = 1 
Query:   79 FRDVDFGEVDFPSLKAEVENREKLTQTDDVLLYDEETQTVD------ARVQETQTEDDAGCRASASALLGFEDWRDMPHDLERFLLRAGARMEKELNSSDS-SQAFVGYAP-LEQDGENEVNLRYSLQCDLGELFKGEKVEAASGGWQGLMV--TGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLLGSGEGGGRS 1002
            F+DV  G V F + K   +  E   QT D+ L+D E QT +      A+  ++Q     G    A++    ED R +   L+      G  M +E++ + + S  F G    L +  E ++   + LQ D    F+ +     +G    L +  TG+SWNATGS++  + GR D  GWC++  AL  WNVF+  + S         +P ++LE SS LMCV+ HP+ P++VAAGSFNGEV VWD    D     + I + FHREPV KVAWVY+++  DY +ASV+ DGKILFW +K+ L  PVEGY++   +G G S
Sbjct:    2 FQDVTLGSVRFEA-KQTKQVIEVYAQTVDIELFDGEAQTENEMTSSSAQTGQSQQPPTRGKGKDATSDTREEDQRRVAECLQN----VGGLMLREMSKNGTTSSCFSGLERYLGESEEKDITKLFRLQFDYDLYFQPQATTNDAGTSTSLKLSCTGVSWNATGSIIAVAYGRFDHSGWCNYRSALCLWNVFQSDLNS--------QKPSLVLETSSGLMCVAFHPQNPSIVAAGSFNGEVFVWDLEPVDYKFLSSGIGDYFHREPVTKVAWVYDIQTADYNIASVSGDGKILFWRIKDKLAFPVEGYVMHLPQGVGGS 306
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: A0A067CJD9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJD9_SAPPC)

HSP 1 Score: 189 bits (481), Expect = 1.050e-51
Identity = 116/281 (41.28%), Postives = 160/281 (56.94%), Query Frame = 1 
Query:  151 TQTDDVLLYDEETQTVDARVQETQTEDDAGCRASASALLGFEDWRDMPHDLERFLLRAGARMEKELNSSDSSQAFVGYAPLEQDGEN-EVNLRYSLQCDLGELFKGEKVEAASGGWQG---LMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLLGS 981
            ++T  V     +TQT  A     QTE       S+S  +  +D R     ++ FL   G  M +E+ +S  S AF  ++  E D E+ +V   ++L  D    FK    E  +GG      L  T +SWNATGSV+  + GR D  GWC++  AL  WN+F              A+P ++LE SS LMCV+ HP  PAV+AAGSFNGEV+VW+T+ ++ LVA + I + FHREP+ KV+WVY+    DY +ASV+ DGK+L W LK+ L  PVEGYLLG+
Sbjct:   28 SETPGVEFVSADTQTAIAADSSCQTEP----IESSSTKVAVDDAR-----VKAFLNDVGGLMLREMQASAKSLAFDDFSVEEADAEDADVTRLFTLSFDFFTHFKAP-AEIGAGGRPSTLQLQCTAVSWNATGSVLAVAYGRFDHSGWCNYRSALCLWNIFH--------PDFNVAKPSLVLETSSGLMCVAHHPTMPAVIAAGSFNGEVLVWNTSLEETLVASSGIGDYFHREPIAKVSWVYDPVARDYNIASVSGDGKVLVWQLKDKLAYPVEGYLLGA 290
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: A0A1V9YQW6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQW6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.080e-51
Identity = 106/230 (46.09%), Postives = 143/230 (62.17%), Query Frame = 1 
Query:  301 LERFLLRAGARMEKELNSSDSSQAFVGYAPLEQDG-ENEVNLRYSLQCDLGELFKG--EKVEAASGGWQGLMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKV--AWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLL 975
            ++RFL   G  M +EL ++  S AF G+A  +QDG E ++   ++L  D    FK   E  E A+ G + L  TG+SWNATGSV+  + GR D  GWC++  AL  WN+F               +P ++LE SS LMCV+ HP  PAVVAAG+FNGEV+VW+T  ++ LVA + I + FHREP+ KV  AWVY+    +Y +ASV+ DGK+L W LK+ L  PVEGYLL
Sbjct:   72 VKRFLSDVGGLMLQELKAAAKSLAFDGFANEQQDGDEADLTRLHTLSFDFFAHFKAPTEGKEQATTGLK-LQCTGVSWNATGSVIAVAYGRFDHSGWCNYRSALCLWNIFHADFNPN--------KPSLVLETSSGLMCVAHHPTMPAVVAAGTFNGEVLVWNTTLEESLVASSAIGDYFHREPISKVWVAWVYDSASREYNIASVSGDGKVLLWQLKDKLAYPVEGYLL 292
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BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Match: W4FF73_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF73_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.470e-51
Identity = 97/226 (42.92%), Postives = 142/226 (62.83%), Query Frame = 1 
Query:  301 LERFLLRAGARMEKELNSSDSSQAFVGYAPLEQDGENEVNLRYSLQCDLGELFKGEKVEAASGGWQ-GLMVTGLSWNATGSVVVASLGRQDIVGWCHFPGALVAWNVFRRGVASGXXXXXXXAEPDVLLEHSSCLMCVSCHPRRPAVVAAGSFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLASVAADGKILFWSLKNNLECPVEGYLL 975
            ++ FL  AG RM +E+  S+ S AF+ + P +   +  V+  ++L  D    FK + ++A     +  L  TG+SWNATGSV+  + GR D  GWC++   L  WN+F     +         +P ++LE SS LMCV+ HP  PA+VAAGSFNGE++VW+T+ ++PLVA + I + FHREP+ K+AWVY+    +Y +ASV+ DGK+L W LK+ L  PVEG+LL
Sbjct:   73 VQAFLNSAGNRMLREMKHSNQSSAFLDFEPEQDADDKHVSKVFTLTFDFFTHFK-QPIDAKKPSARLKLECTGVSWNATGSVLAVAYGRFDHSGWCNYRSVLCLWNLFSADFNAN--------KPTLVLETSSGLMCVAHHPTNPAMVAAGSFNGELMVWNTSLEEPLVATSGIGDYFHREPITKLAWVYDTPSREYHIASVSGDGKVLLWQLKDKLSYPVEGFLL 289
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZY0_ECTSI1.270e-8856.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZBI6_9STRA5.460e-6450.44WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2UTZ9_9STRA6.000e-6356.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1CG11_9STRA7.880e-6143.37Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A485LGC1_9STRA9.520e-5439.82Aste57867_20716 protein n=1 Tax=Aphanomyces stella... [more]
G4Z490_PHYSP1.670e-5338.99WD-40 domain-containing protein n=5 Tax=Phytophtho... [more]
A0A2P4YCZ2_9STRA2.480e-5238.05Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A067CJD9_SAPPC1.050e-5141.28Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YQW6_9STRA1.080e-5146.09Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
W4FF73_9STRA2.470e-5142.92Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:153016..157999 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.6
Seed ortholog evalue6.1e-74
Seed eggNOG ortholog2880.D7FZY0
Preferred nameWDR34
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005868,GO:0005875,GO:0005929,GO:0005930,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0030705,GO:0031503,GO:0032838,GO:0032991,GO:0035735,GO:0036064,GO:0042073,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044782,GO:0045503,GO:0045504,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060271,GO:0070925,GO:0071840,GO:0097014,GO:0097542,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG1587@1,KOG1587@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size1068
Cds size1065
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.19965.1prot_S-ischiensis_contig83.19965.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig83 153016..157997 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817327.4541023-CDS-S-ischiensis_contig83:153015..1532311622817327.4541023-CDS-S-ischiensis_contig83:153015..153231Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 153016..153231 +
1695741029.535515-CDS-S-ischiensis_contig83:153015..1532311695741029.535515-CDS-S-ischiensis_contig83:153015..153231Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 153016..153231 +
1622817327.472223-CDS-S-ischiensis_contig83:153465..1536181622817327.472223-CDS-S-ischiensis_contig83:153465..153618Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 153466..153618 +
1695741029.5515585-CDS-S-ischiensis_contig83:153465..1536181695741029.5515585-CDS-S-ischiensis_contig83:153465..153618Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 153466..153618 +
1622817327.487933-CDS-S-ischiensis_contig83:154268..1543971622817327.487933-CDS-S-ischiensis_contig83:154268..154397Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 154269..154397 +
1695741029.5646327-CDS-S-ischiensis_contig83:154268..1543971695741029.5646327-CDS-S-ischiensis_contig83:154268..154397Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 154269..154397 +
1622817327.4985962-CDS-S-ischiensis_contig83:154939..1551361622817327.4985962-CDS-S-ischiensis_contig83:154939..155136Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 154940..155136 +
1695741029.5790417-CDS-S-ischiensis_contig83:154939..1551361695741029.5790417-CDS-S-ischiensis_contig83:154939..155136Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 154940..155136 +
1622817327.5090983-CDS-S-ischiensis_contig83:156094..1562511622817327.5090983-CDS-S-ischiensis_contig83:156094..156251Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 156095..156251 +
1695741029.5915902-CDS-S-ischiensis_contig83:156094..1562511695741029.5915902-CDS-S-ischiensis_contig83:156094..156251Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 156095..156251 +
1622817327.5197241-CDS-S-ischiensis_contig83:156972..1570381622817327.5197241-CDS-S-ischiensis_contig83:156972..157038Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 156973..157038 +
1695741029.6050386-CDS-S-ischiensis_contig83:156972..1570381695741029.6050386-CDS-S-ischiensis_contig83:156972..157038Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 156973..157038 +
1622817327.530617-CDS-S-ischiensis_contig83:157487..1576041622817327.530617-CDS-S-ischiensis_contig83:157487..157604Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 157488..157604 +
1695741029.6189072-CDS-S-ischiensis_contig83:157487..1576041695741029.6189072-CDS-S-ischiensis_contig83:157487..157604Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 157488..157604 +
1622817327.5433986-CDS-S-ischiensis_contig83:157967..1579971622817327.5433986-CDS-S-ischiensis_contig83:157967..157997Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 157968..157997 +
1695741029.633919-CDS-S-ischiensis_contig83:157967..1579971695741029.633919-CDS-S-ischiensis_contig83:157967..157997Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 157968..157997 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig83.19965.1

>prot_S-ischiensis_contig83.19965.1 ID=prot_S-ischiensis_contig83.19965.1|Name=mRNA_S-ischiensis_contig83.19965.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=355bp
PPRARSTVLRELAMTISAGHRAPRDGFRDVDFGEVDFPSLKAEVENREKL
TQTDDVLLYDEETQTVDARVQETQTEDDAGCRASASALLGFEDWRDMPHD
LERFLLRAGARMEKELNSSDSSQAFVGYAPLEQDGENEVNLRYSLQCDLG
ELFKGEKVEAASGGWQGLMVTGLSWNATGSVVVASLGRQDIVGWCHFPGA
LVAWNVFRRGVASGGGGGGGGAEPDVLLEHSSCLMCVSCHPRRPAVVAAG
SFNGEVVVWDTAQDDPLVAVTRIENLFHREPVQKVAWVYNMKEEDYRLAS
VAADGKILFWSLKNNLECPVEGYLLGSGEGGGRSARRAAAAGSAVFGATA
LSFPA
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mRNA from alignment at S-ischiensis_contig83:153016..157999+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig83.19965.1 ID=mRNA_S-ischiensis_contig83.19965.1|Name=mRNA_S-ischiensis_contig83.19965.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4984bp|location=Sequence derived from alignment at S-ischiensis_contig83:153016..157999+ (Schizocladia ischiensis KU_0333)
CCGCCGCGAGCACGGAGCACGGTCTTGAGAGAGCTTGCCATGACTATCTC
TGCAGGACACAGGGCACCCAGGGACGGGTTCCGGGATGTGGATTTCGGGG
AGGTCGATTTCCCCAGCCTCAAGGCAGAGGTCGAAAACCGCGAAAAGCTG
ACGCAGACGGACGACGTGCTTTTGTACGACGAGGAAACGCAGACAGTGGA
CGCCCGGGTGCAAGAGGTGTGCTACCGCCCAATGGCCCTAACGTGCGATT
TAGGAACGTTTCTTCACCAAATGTAGCCCTGAGGGTCGCAGGCGTGCTCC
AGGATCGTTGCCCATTGCGCCGGCCTCGTTGTGCACCCTAGCGCTTGGCC
CACCTTGTAGAAAATTGCACGGGGGAGGCATGTGCACCTGGACCCCCTGG
CCAAGGCAAGTTCCTCCTCCTCTCCTGCCGCCCTTGCACTCGTCCGACAG
ACGCAGACGGAAGACGACGCTGGCTGCCGTGCGTCCGCTTCCGCCCTCTT
GGGGTTTGAAGACTGGAGGGACATGCCCCACGACCTGGAGCGATTCCTGC
TCAGGGCCGGCGCGAGGATGGAGAAGGAGTTGAATAGTTCGGATAGCAGT
CAGGTGAGGAGTTGAATAATTCGGATAGCAGTCAGGTGCAGCAGCGTGCT
TTATGTGGGGGTGGTGGGGACCTGGGGCCTCTGTGTACGAATGGCAGAGG
TGCAGCAACATGCTTGGTGCGGGCATGGTGGGGACCTGCGGCCTCTGTGT
ACCAATGGCAGTCAGGTGCAGCAGCATGCTTTGTGGTGGGGGGGTGGGGA
CCTGAGGCCTCTGTGTACGAATTGCATGCCGGGTCCCGATATCGGGGGCT
GTCCCTCGCTTACTTACCATGTAGTGGTGGTGGGGTTCACGGGATGCACG
GGACAGGTCAGTGGCTGGGAGGCGACAGCTCGCATCACTTGCTGGCAAGT
AGCACTTTCGAGATGCCACCGCACTTGCAGTTCTGCGCTCACGTCCTTGT
GGACGGTGGCTCGTGAACTGCAGTTGCGCCATGGCTATGGGCGAGTTGCG
TTCACAAGGGGCACTCCAACGCAGGGACCCTCGCCGCCCTGCGAGACGGT
CGGCAGGCTTGCCGTACCATGTACACACCTACTAGAGCTCTAAGGCAATG
CGGTATGTCTCTGGGGTGTTGACCCTGTCCCAAGGTCGAAACTTCTCACG
TCCCCATCCACGGTGTCTCTCGGCTGCTCGCCCCGACCCGATCATTGCTG
CAGGCGTTCGTAGGCTACGCCCCTCTGGAGCAAGACGGGGAGAACGAGGT
TAACCTCCGGTACAGCTTGCAGTGCGACCTCGGGGAGCTTTTCAAGGGCG
AGAAGGTCGAGGCGGCCAGCGGCGGGTGGCAGGTGGGGAATTTCTTATGG
AAGGCGTTTTTTTCACGTGGAAGTGTCCCAGGCGGGGGTGCTCCCCCTTG
GAGGCGGGGGAAGATGGTGGTGCCTGCCGGGCCGAAAAGCTCCTCGGTGG
TTTGGAGGCGCTTGGCCGACATGAAAGCTGTTTGAGCACTCGTGTGCTGA
CTGTTTGAAAGTGTTTCGCTGCGATCAAGTATGAGTAGGTAGGTACTAAG
TACTGTATAAGTGCTCGTTCACTATGTACTGTCAAAGCACTTCAAGGCCG
CTGTTAGCAGCAGGTGCTGTGCGATGCTGTCCTGCAGTACTTGATGTTTC
TTCCTTGGAAGTACAGTACTTAGTAGTACAGTGTGGTACCTGGTACTGCC
CTACGTGCTTGGCACTGCGAGTAAGTACAATAGTTGTTCGAAGCACAGAG
CGTACTCGCGCTTACTCCTGAGTAGTGGCATGTGTCGCGCGGAGCTGACT
AGGCTGCCTGCTCGTCCGTGCCCTGTGCTGCGGCCCGCCAACATGCAGTC
CTGCCCGTGCCTCCCCCATTGCAGGGCCTAATGGTGACCGGGCTGTCCTG
GAACGCGACCGGGTCGGTGGTGGTTGCAAGCCTGGGCCGCCAGGATATTG
TGGGCTGGTGCCACTTCCCGGGGGCGCTGGTGGCCTGGAATGTCTTCCGC
AGGGGGGTTGCTAGTGGCGGCGGTGGCGGTGGCGGAGGTGCGGAGCCGGA
TGTGTTGCTGGAGCACAGCAGGTGGGTTATTGTTTGCTAGTGGCTGGGTG
GCGGTGGCGGAGGCGCGGAGCCGGATGTATTGCTAGATCACAGCAAGCAG
GTGGGTTGTGATTCTCATAAATTGTAACGAGGTACAATGGCACGTGTGTG
CGATTGACTGTTCTCGTACTAGTAGTTGTTTCATTTAAGAATTGAATGTT
ATTATATTAGTGACTACTTCGTCGCAGTATAGATGATTCTAGCAGGTGGG
TTGTTGTTGTTGCGTGCAGGATGCGCCTGGGGGGCGCTGCCAGGGGGCGG
TTGTGGGAAATGAGAGGGGTGGAAGGAGAGGGTGGGTCATTGGGGCGGGT
TTGTTGTTGCCCGTCCCTTGTCCGGCTGAACTGGCCCGGGCATGTTTATT
GGTGTTTCGGTATGGTCGCATTGTGTATCGATGTACAGTAGTGCTTGCGC
GTTTGTTGGTGTTTTGGTACTCGAGTACAGTATGTGTCTATGTAGTGCTC
GCACGTGTATTGGCGTTTTGGTAAGGTATGTGTCTATGTAGTGCTTGCAC
GTTTATCGGTGTTATGGTAGGGTCGCAGTATGTATCTACGTAGTGCTTTG
AAGCAATTAAAAGGACGTGGGATGGCTTTGCAATGGAATGGGGGCGAGAC
GTGGGGTTGGCAGGCGGAGGGAGGGGGGCGCAAGGATCGTGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGAAGGAGGGCGAGGAGGGCGTTGAGGCGGAGGAGAAGTGTGCTGT
ACCGTTCGTGCAAGAGCCGCTACTCTTCCCCTCTGTCCATTTGGATCTCC
CACCAGCCTCACAGACACCCAGTGACCAACGTGCATACTTCGAAGCATTT
GCACTGATCCCCAGCCTGCCCTCGTGTCCCCGTGCCCCCTGCTCCGCGGC
CGCCGCCGCCCTCTCCATGCTACTGGCAGCTGCCTCATGTGCGTGAGCTG
CCACCCGCGGCGACCGGCGGTGGTGGCTGCGGGGTCCTTCAACGGAGAGG
TGGTGGTGTGGGACACGGCCCAAGATGACCCGCTGGTGGCGGTCACACGC
ATCGAGAACCTCTTCCACAGGGAACCTGTACAGAAGGTTGGTCGGAGAGG
ATGGGACGGGGGGGAGATGGCAGGCAGAGGGGCTAAGCCGTCACGGGACA
TAACAGTGCATGATGCAGTCTATATATGTACTCATGTGGTGCTTGTCGTA
GTCCCGAGACCATTGACCACTGGGTAATAAATGAGTGTGTAGTGGTGAGA
AAAGGACCCCAACATTGCTCCTTTGCGGGGCGAAATCTCGGCTTGGATCA
AAGGACAGTCCTCCCATCAGCAAGAAACCGACGATTCGCGGCAAGAAAAC
GTGCCGTGTCGTTCTCGCCGTCGTCCGGGTGCAACAATGTTTCGTTGGCC
ACGCCGAGAACGGAGCAAGCCACGCAGTGCACGTGCAATCTCGCCACTTT
GTCTTCGGAAGGCTCTTCGCTACAGTACTGCACTGCACTGCTGCATGTAC
ACTTCGTACTTGGAAGTACTTCCTACCCTACCTACTCGAGCATAACAGTA
GTGCGACAAGTATTTTCCTGCGGCGTGCTGCGCTGCTTGCCCACCCTTTG
CCCCCTCTCGCTAACTCAATCCACTCCACGGCGGCGTGCCTGGCAACGCC
TCGCAAACACATGCGAGGTCCTGTGGGATCCAGTCATTTTTTACGGCGCC
ACAGTGGCCCAAACAAACAGATCAAACCTAGACACCTTCCTTTGGCCTGC
CCCCGGGCTGCCACCACCCCTCCTGCCGCTGCCAATGCCCGTGTGCGGGA
GACGCAGGTTGCGTGGGTATACAACATGAAGGAGGAGGACTACCGCCTTG
CCTCCGTGGCTGCCGACGGAAAGGTACTTGGAGGCGCCTTGCAGTAGGTT
CGGGGGGGGGTGTGCAGTGCCTTGTACGACAGGTTTAGGGGGGGCAGTGC
CGTGTACAACCTTATGTACCTCGAAGTACCCCCTCATCCCCCTGCTTTGC
TTTCGCGAGACCCGGCATGGTCTCCTCCCTGCATCATGTCCATGCCCTTG
TGGCCGCATCTGCAGTCAGCTGTCCTGGCTTCGCTTCGGCGGCCGCCGCC
GCCCCCGCCACCGTGCCTGGGCTGCAGACAGGCTTGCGCCAGCGCATGGC
CTGTGCGTGAGCTTTATCTCGCGAGGCTTGCACGGACACGTGAGCTTCCC
TGCAAGCCCACGGAACCCAGCATGGTCTCAATAGGAGACGGAGCCCATAC
ACGGGCCCCTTCCGCTGCCCCCCCCCTCCCCCCGCCCCTCCTCAAACCCG
GGCCGGAACAAAATAAAAACAGATCCTGTTCTGGTCCCTGAAGAACAACC
TGGAGTGTCCGGTGGAGGGTTACCTGCTGGGAAGCGGGGAAGGCGGGGGG
CGTAGCGCCCGCAGGGCGGCTGCCGCGGGCTCGGCAGTGGTGAGAGCAAG
ACGCGCGTACTGTACTAGCTCTACTTCCGGAAGTGCTGTACTGCAAGTAC
GAGTAAACATCGTGTACCGTACAGTACTTCGAAGTAGTACCGTACAGTCC
TACAGCACAACAGTACAGTGCAGTACGGTAGTACCCTTACAGTATAGGCA
TGTCGTACTGTGCCTGCCCACCCCCCTCGGACCACGCCACTAAGGACCTC
AACAGTGACCCTGCCTTAGCTCAACTAAGTGCATACTTCAAGTACTTACG
GTAGCTAGGCGTAACATCACGGTACCCCCATCCCTCAACCCCCCCCCCGC
CTCCCTCCCTCCCCACCCCCCCCAAACACCCGCAATTTGCCATCCCTCTC
AGTTTGGGGCCACCGCCCTCTCCTTCCCGGCTGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig83:153016..157999+

>mRNA_S-ischiensis_contig83.19965.1 ID=mRNA_S-ischiensis_contig83.19965.1|Name=mRNA_S-ischiensis_contig83.19965.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2130bp|location=Sequence derived from alignment at S-ischiensis_contig83:153016..157999+ (Schizocladia ischiensis KU_0333)
CCGCCGCGAGCACGGAGCACGGTCTTGAGAGAGCTTGCCATGACTATCTC
TGCAGGACACAGGGCACCCAGGGACGGGTTCCGGGATGTGGATTTCGGGG
AGGTCGATTTCCCCAGCCTCAAGGCAGAGGTCGAAAACCGCGAAAAGCTG
ACGCAGACGGACGACGTGCTTTTGTACGACGAGGAAACGCAGACAGTGGA
CGCCCGGGTGCAAGAGCCGCCGCGAGCACGGAGCACGGTCTTGAGAGAGC
TTGCCATGACTATCTCTGCAGGACACAGGGCACCCAGGGACGGGTTCCGG
GATGTGGATTTCGGGGAGGTCGATTTCCCCAGCCTCAAGGCAGAGGTCGA
AAACCGCGAAAAGCTGACGCAGACGGACGACGTGCTTTTGTACGACGAGG
AAACGCAGACAGTGGACGCCCGGGTGCAAGAGACGCAGACGGAAGACGAC
GCTGGCTGCCGTGCGTCCGCTTCCGCCCTCTTGGGGTTTGAAGACTGGAG
GGACATGCCCCACGACCTGGAGCGATTCCTGCTCAGGGCCGGCGCGAGGA
TGGAGAAGGAGTTGAATAGTTCGGATAGCAGTCAGACGCAGACGGAAGAC
GACGCTGGCTGCCGTGCGTCCGCTTCCGCCCTCTTGGGGTTTGAAGACTG
GAGGGACATGCCCCACGACCTGGAGCGATTCCTGCTCAGGGCCGGCGCGA
GGATGGAGAAGGAGTTGAATAGTTCGGATAGCAGTCAGGCGTTCGTAGGC
TACGCCCCTCTGGAGCAAGACGGGGAGAACGAGGTTAACCTCCGGTACAG
CTTGCAGTGCGACCTCGGGGAGCTTTTCAAGGGCGAGAAGGTCGAGGCGG
CCAGCGGCGGGTGGCAGGCGTTCGTAGGCTACGCCCCTCTGGAGCAAGAC
GGGGAGAACGAGGTTAACCTCCGGTACAGCTTGCAGTGCGACCTCGGGGA
GCTTTTCAAGGGCGAGAAGGTCGAGGCGGCCAGCGGCGGGTGGCAGGGCC
TAATGGTGACCGGGCTGTCCTGGAACGCGACCGGGTCGGTGGTGGTTGCA
AGCCTGGGCCGCCAGGATATTGTGGGCTGGTGCCACTTCCCGGGGGCGCT
GGTGGCCTGGAATGTCTTCCGCAGGGGGGTTGCTAGTGGCGGCGGTGGCG
GTGGCGGAGGTGCGGAGCCGGATGTGTTGCTGGAGCACAGCAGGGCCTAA
TGGTGACCGGGCTGTCCTGGAACGCGACCGGGTCGGTGGTGGTTGCAAGC
CTGGGCCGCCAGGATATTGTGGGCTGGTGCCACTTCCCGGGGGCGCTGGT
GGCCTGGAATGTCTTCCGCAGGGGGGTTGCTAGTGGCGGCGGTGGCGGTG
GCGGAGGTGCGGAGCCGGATGTGTTGCTGGAGCACAGCAGCTGCCTCATG
TGCGTGAGCTGCCACCCGCGGCGACCGGCGGTGGTGGCTGCGGGGTCCTT
CAACGGAGAGGTGGTGGTGTGGGACACGGCCCAAGATGACCCGCTGGTGG
CGGTCACACGCATCGAGAACCTCTTCCACAGGGAACCTGTACAGAAGCTG
CCTCATGTGCGTGAGCTGCCACCCGCGGCGACCGGCGGTGGTGGCTGCGG
GGTCCTTCAACGGAGAGGTGGTGGTGTGGGACACGGCCCAAGATGACCCG
CTGGTGGCGGTCACACGCATCGAGAACCTCTTCCACAGGGAACCTGTACA
GAAGGTTGCGTGGGTATACAACATGAAGGAGGAGGACTACCGCCTTGCCT
CCGTGGCTGCCGACGGAAAGGTTGCGTGGGTATACAACATGAAGGAGGAG
GACTACCGCCTTGCCTCCGTGGCTGCCGACGGAAAGATCCTGTTCTGGTC
CCTGAAGAACAACCTGGAGTGTCCGGTGGAGGGTTACCTGCTGGGAAGCG
GGGAAGGCGGGGGGCGTAGCGCCCGCAGGGCGGCTGCCGCGGGCTCGGCA
GTGATCCTGTTCTGGTCCCTGAAGAACAACCTGGAGTGTCCGGTGGAGGG
TTACCTGCTGGGAAGCGGGGAAGGCGGGGGGCGTAGCGCCCGCAGGGCGG
CTGCCGCGGGCTCGGCAGTGTTTGGGGCCACCGCCCTCTCCTTCCCGGCT
TTTGGGGCCACCGCCCTCTCCTTCCCGGCT
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