mRNA_S-ischiensis_contig83.19956.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: UPI0011B23BDA (tetratricopeptide repeat protein n=1 Tax=Haliangium sp. UPWRP_2 TaxID=1931276 RepID=UPI0011B23BDA) HSP 1 Score: 116 bits (290), Expect = 1.960e-26 Identity = 63/150 (42.00%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 109 LEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLL-CRGHLDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAWKAAPELSSLARSGSLDFAVY 555
+EEG RLS S +WP+ +Y +KGP AW SG+ +PF++TSN +A YA+V+ A LRD L G LD P+Y+VE+ AG G + LFLR L ML + + G+ VMTD+A++N+ AW ++P L G LD A++
Sbjct: 51 IEEGKRLSDSMLWPLTRRFYEAKGPAAWSSGE-------IPFYVTSNPFVANCYAQVVLAFLRDALRTPGFLDASAPIYIVEMAAGHGLLTFLFLRRFLPMLRSS---SVRGLDVRYVMTDIAESNLTAWVSSPALGPYFEEGVLDCALF 190
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: A0A7C1FV82_9CHLR (Tetratricopeptide repeat protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1FV82_9CHLR) HSP 1 Score: 112 bits (279), Expect = 6.280e-25 Identity = 66/156 (42.31%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 103 VMLEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGH-------LDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAWKAAPELSSLARSGSLDFA 549
++LE+ RLS S +W Q ++ +G EAW G VPF++TSN IA+ YARV+ LRD G LD G PVY+VELGAG G+F FL+ LL +L LT G+R VMTD + ++ W+A P L L +G LDFA
Sbjct: 14 LILEQNQRLSRSLLWQFQRTFFDQQGVEAWRRG-------LVPFYVTSNPFIAQAYARVVFGFLRDCAAIGEENADFAPLDPGQPVYIVELGAGSGRFGAYFLKRLLTLLDH---LTLNGVRVQYVMTDFTERHIAYWQAHPALQPLMEAGQLDFA 159
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: A0A7S1C368_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C368_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.670e-24 Identity = 64/127 (50.39%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 178 GPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGHLDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRP---VLVMTDLAQANVEAWKAAPELSSLARSGSLDFA 549
G AW S TVPFFITSN IAR YAR + LLRDL RG L G +Y+VELGAG GKF L +AL +AA AG+R V+V+TD A++NV AW+A P L +LA G +DFA
Sbjct: 1 GVTAWSSA-------TVPFFITSNPFIARAYARCVRGLLRDLAGRGELVPGEKIYVVELGAGSGKFGFLLAQALQAAMAARRGGAVAGVRASDVVVVLTDFAESNVGAWEAMPGLRALADEGVVDFA 120
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: UPI001B2E0AD6 (Tetratricopeptide repeat protein n=2 Tax=Paenibacillaceae TaxID=186822 RepID=UPI001B2E0AD6) HSP 1 Score: 101 bits (252), Expect = 2.320e-21 Identity = 64/149 (42.95%), Postives = 84/149 (56.38%), Query Frame = 1
Query: 109 LEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGHLDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAWKAAPELSSLARSGSLDFAVY 555
LE G LS S +W +Q YY + GP AW G TVP +ITSN +A +A VI +RD L R D +Y+VELGAG G+FS LR L L A P L + +R VMTD A++NV W+ +L+ SG+LDFA++
Sbjct: 5 LESGKPLSASVLWELQRRYYSAAGPGAWSGG-------TVPHYITSNPFMAGAFAAVIAGYMRDWLERPDRDPEARLYIVELGAGSGRFSYHLLREL-ARLCALPTLRQ--VRYTYVMTDFAESNVAFWERHDKLAPFVASGTLDFALF 143
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: A0A835Z6J8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J8_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.050e-21 Identity = 59/155 (38.06%), Postives = 81/155 (52.26%), Query Frame = 1
Query: 100 KVMLEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGH---LDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAWKAAPELSSLARSGSLDFAVY 555
+ +LE+ + S S +W + ++Y KG E+W G VP FIT N I R YA V+C LRD + LD P+Y++ELGAG GKFS L+ALL M E + V VMTD ++N + W P L +SG LD A++
Sbjct: 82 RCVLEDFTQCSQSHLWKLMMSFYDRKGVESWSQG-------IVPHFITCNSFIGRSYAHVLCGFLRDCMTAKSTMPLDQTQPLYIIELGAGSGKFSFFMLKALLQMKDMCDFPLE---KIVFVMTDFTESNFKFWADHPALKPFVQSGQLDMAIF 226
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: A0A3N5SPI7_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5SPI7_9CHLR) HSP 1 Score: 94.4 bits (233), Expect = 3.400e-21 Identity = 58/129 (44.96%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 109 LEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGHLDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAW 495
+E G LS S +W +QA Y+ +G AW S +TVP +ITSN IA YARV+ LRDLL LD PVYL+ELGAG G+F+ FLR L +L P G+R V++D A+ NV W
Sbjct: 12 IESGHPLSKSLLWALQARYFRDQGIAAWSS-------NTVPSYITSNPSIAHAYARVVFGYLRDLLPT--LDTSQPVYLLELGAGSGRFAFYFLRRLRELLEWVP-----GVRVCYVLSDYARRNVGFW 126
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: A0A6P0V6F1_9CYAN (Tetratricopeptide repeat protein n=4 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0V6F1_9CYAN) HSP 1 Score: 99.8 bits (247), Expect = 1.130e-20 Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 1
Query: 109 LEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGHLDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAWKAAPELSSLARSGSLDFAVYGVD 564
LE+ +LS S +W Q ++ +G EAW G TVP +ITSN IAR YA+VI LRD +G L+ P+Y++ELGAG G+F+ FL+ PL I VMTD N+E W++ P L RSG LDFA + ++
Sbjct: 12 LEQNQQLSKSLLWRFQRNFFDHQGVEAWNQG-------TVPHYITSNPFIARAYAKVIFGFLRDCHAQG-LNTEQPIYIMELGAGSGRFAYHFLKKFFEFFHRSPL---QHISVKYVMTDFTDHNLEFWRSHPFLYPFVRSGVLDFARFDME 152
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: A0A1I0MMT5_9BACT (Putative S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Chitinophaga sp. YR573 TaxID=1881040 RepID=A0A1I0MMT5_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 2.140e-20 Identity = 53/156 (33.97%), Postives = 84/156 (53.85%), Query Frame = 1
Query: 103 VMLEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGH-----LDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAWKAAPELSSLARSGSLDFAVY 555
V++EE R S S++W +Q +++ +G +AW G VP ++TSN IA YA++ A + DL+ + DL HP+Y+VELG G G+FS F++ +L L I+ + VM+D Q+ + W P+L + G LDFA +
Sbjct: 11 VIIEEKCRFSQSRIWNLQRLFFNQQGTKAWSKG-------IVPHYVTSNPYIAACYAKLTYAYISDLIAQHSESTPTFDLQHPIYIVELGTGSGRFSFHFMKCFFDILDQSAL---RKIKVIYVMSDFVQSTINDWLVHPQLQDWVKKGRLDFATF 156
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: A0A7W1YV74_9BACT (Uncharacterized protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YV74_9BACT) HSP 1 Score: 98.6 bits (244), Expect = 2.460e-20 Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 1
Query: 106 MLEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGHLDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAWKAAPELSSLARSGSLDFAVY 555
++E + S S +W +Q Y G +AW VP +ITSN IA++YA+V+ LRD L + +DL HP+Y+V+LGAG G+ + LFL+ L +A+ L + VMTD+A +N+E W+ P+L G LD A +
Sbjct: 5 LIEAPTKFSQSLLWKLQRDAYCQFGIDAWNQYG-------VPSYITSNSFIAKNYAQVVLGYLRDCLSKESIDLTHPIYIVDLGAGTGRLAYLFLKELHASIASSSL---PKLNLCYVMTDIASSNIEFWQQNPQLKPYFEQGLLDCAYF 144
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Match: A0A7S4D973_HETAK (Type II protein arginine methyltransferase (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D973_HETAK) HSP 1 Score: 96.3 bits (238), Expect = 5.570e-20 Identity = 58/155 (37.42%), Postives = 80/155 (51.61%), Query Frame = 1
Query: 100 KVMLEEGVRLSHSQVWPMQAAYYHSKGPEAWGSGDGQRRADTVPFFITSNRRIARDYARVICALLRDLLCRGH---LDLGHPVYLVELGAGPGKFSCLFLRALLGMLAADPLLTEAGIRPVLVMTDLAQANVEAWKAAPELSSLARSGSLDFAVY 555
+ +LE+ R S S +W + ++Y KG E+W G VP FIT N I + YA+V+ +RD + LD P+Y++ELGAG GKFS L+ALL M +L + V VMTD + N W A P L SG LD A++
Sbjct: 76 RCVLEDYTRCSESHLWKLMMSFYDRKGVESWSQG-------IVPHFITCNAFIGKAYAQVLYGFIRDCMSGRSPLALDPAEPLYVIELGAGSGKFSFFMLKALLEM---KEVLEFPAEKIVYVMTDFTENNFNFWNAHPMLKPYIESGQLDSAIF 220 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig83.19956.1 >prot_S-ischiensis_contig83.19956.1 ID=prot_S-ischiensis_contig83.19956.1|Name=mRNA_S-ischiensis_contig83.19956.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=218bp MQGGAVAGVGAGAARLWGRLAVLAQRKAEQDRGKVMLEEGVRLSHSQVWPback to top mRNA from alignment at S-ischiensis_contig83:116106..118056+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig83.19956.1 ID=mRNA_S-ischiensis_contig83.19956.1|Name=mRNA_S-ischiensis_contig83.19956.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1951bp|location=Sequence derived from alignment at S-ischiensis_contig83:116106..118056+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig83:116106..118056+ >mRNA_S-ischiensis_contig83.19956.1 ID=mRNA_S-ischiensis_contig83.19956.1|Name=mRNA_S-ischiensis_contig83.19956.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1308bp|location=Sequence derived from alignment at S-ischiensis_contig83:116106..118056+ (Schizocladia ischiensis KU_0333)back to top |