mRNA_S-ischiensis_contig82.19902.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.330e-37 Identity = 80/182 (43.96%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 13 WDQGEGDLNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQGTPVTELTRLSAVATETGSWSGLLPMGRSSNDYMLTLTGHVADNLGAQALSSMDDRGDTVAIRVT 558
W Q EGDL+L + W+ F+T +T LV G+LT G TYTF LSATDV S +TGF+ + + +N+PP GGH+ SP +G A +F L L WTD+ +DLPL ++FSY + LS A E W G LP+G SS++Y + + GHV+D+ GA A+S+ D G V +RVT
Sbjct: 772 WTQAEGDLDLEERE------WSTVFATAQTGANLVIPRGLLTGGSTYTFRLSATDVASQATGFADMTLTINAPPTGGHVVASPRAGVAAIDTFVLESLDWTDEVDDLPLLFSFSYNNEEESGQQRSLSVFAVELPEWQGSLPLGPSSDNYTMLIKGHVSDSFGATAVSTSDAIGSPVTVRVT 947
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: D7FLQ1_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ1_ECTSI) HSP 1 Score: 105 bits (262), Expect = 5.870e-23 Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 13 WDQGEGDLNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSY 357
W Q EGDL+L + W+ F+T +T LV G+LT G TYTF LSATDV S +TGF+ + + +N+PP GGH++ SP +G A +F L L WTD+ +DLPL ++FSY
Sbjct: 480 WTQAEGDLDLEERE------WSTVFATAQTGANLVIPRGLLTGGSTYTFRLSATDVASQATGFADMTLTINAPPTGGHVDASPRAGVAAVDTFLLESLDWTDEVDDLPLMFSFSY 588
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 1.880e-20 Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 1
Query: 19 QGEGDLNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQG--------TPVTELTRLSAVATETGSWSGLLPMGRSSNDYMLTLTGHVADNLGAQALSSMDDRGDTVAIR 552
Q G+L+L + GW+ FST + L+ R G L G Y+F LSATD S G+++ N+PP GGHL+ S A L L WTDD +DLPL+Y+F Y QG + T + +LS+ + + + S +P G S ND+ LT+ V+D LG+ A +++ + G + +R
Sbjct: 349 QENGNLDLRN-------GWSEAFSTPVNARTLIIRKGALGAGQVYSFSLSATDA-SGLVGYAEFSFETNAPPSGGHLKSDRLSATAGVNPVVLQTLGWTDDIDDLPLTYSFGYIQGYHEVITIASESTFVNKLSSSPSVSTTLSTNVPAGISRNDFNLTIVVSVSDTLGSMAATTLGEDGAPMIVR 526
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: A0A7S1GCK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCK9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.580e-20 Identity = 68/182 (37.36%), Postives = 92/182 (50.55%), Query Frame = 1
Query: 34 LNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQGTPVTELT---RLSAVAT----ETGSWSGLLPMGRSSNDYMLTLTGHVADNLGAQALSSMDDRGDTVAIRVT 558
L + V G G F + R ++ A + G TYTF L +D N FS+LEV +N PP G++ V P SG A +F +S WTDD +DLPL Y FSY + P T +L VA E LLP GR N ++T+ G+V DNLGA+ +S D+ G+ + VT
Sbjct: 393 LQVQWSVTGPGVTNDIAFVSPANRMLIKTAANIFVPGATYTFRLDTSD--DNGQSFSELEVLINEPPSSGYIAVEPQSGIAAVSNFQISAELWTDDADDLPLVYRFSYEEEVPATSNAAAGKLQEVALGIYKEDNFVDVLLPAGRGENG-VVTIFGYVRDNLGAKVKASKDESGNALWASVT 571
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: A0A7S1GR23_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GR23_HEMAN) HSP 1 Score: 94.7 bits (234), Expect = 1.370e-19 Identity = 70/185 (37.84%), Postives = 98/185 (52.97%), Query Frame = 1
Query: 1 LTVEWDQGEGDLNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQGTPVTELTRLSAVATETGS--WSGLLPMGRSSND-YMLTLTGHVADNLGAQALSSMDDRGDTVA 546
L+ W GD++L+ A ST T +V RA LT G +YTF L+AT + S S G ++ N PP GG V P +G ++S S++LS L WTDDTEDLPLSY FS++ S++ T + + +S LP+G S+N Y L LT V D L A + ++ GD+ A
Sbjct: 148 LSYSWSTVVGDVSLSD---------AGLLSTTLTGTSIVIRADKLTPGISYTFRLTATYLGSESWG--EVSFKTNQPPLGGSFSVYPMNGTSLSTSYTLSALGWTDDTEDLPLSYLFSHSSA---------SSLGTPSANPVFSAYLPVGDSTNSTYALNLTLTVRDALSAATVVTLCGLGDSSA 312
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: D7FJB7_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB7_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 2.200e-19 Identity = 63/185 (34.05%), Postives = 94/185 (50.81%), Query Frame = 1
Query: 7 VEWDQGEGDLNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQG---------TPVTELTRLSAVATETGSWSGLLPMGRSSNDYMLTLTGHVADNLGAQALSSMDDRG 534
+ W Q G+L+L + GW FST + LV R G L G Y+F LSATD S G+++ N+PP GGHL+ S A L L WTDD +DLPL+Y+F Y QG + + RLS+ + + + + +P G S N++ LT+ +D LG+ A +++ + G
Sbjct: 299 LTWRQENGNLDLRN-------GWTKAFSTPVNARTLVTRKGALGAGQVYSFSLSATDA-SGLVGYAEFSFETNAPPSGGHLKSDRLSATAGVNPVVLQTLGWTDDIDDLPLTYSFGYIQGYHEVIAIASSESALVNRLSSSPSVSTTLTTNVPAGLSRNEFNLTIVVSASDTLGSTAATNLGEDG 475
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: A0A662WEE3_9STRA (GPS domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEE3_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.360e-13 Identity = 60/193 (31.09%), Postives = 84/193 (43.52%), Query Frame = 1
Query: 4 TVEWDQGEGDLNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQGTPVTELTRLSAVATETG---------------------SWSGLLPMGRSSNDYMLTLTGHVADNLGAQALSS 519
T W+Q +GDL L G A T + IL LT G TY F L A+D N GF + V +NSPP G V+P SG A+ F+LSC W+DD D PL+Y+F + L+ T+ G + S + P G + +T+ ++D LGA A++S
Sbjct: 1021 TARWEQTQGDLVLPDATAGDSSDAFALPLTSLSNAIL---KNTLTAGLTYGFRLVASDSEGN-VGFGSISVVVNSPPSSGTFTVTPQSGYAMQDVFTLSCSQWSDDVNDFPLTYSFGVLS---TSSFQALNNATTDIGVLVELLQKAMTPLVVNQPSPQATSTMFPPGNMQDSEEMTVVAFISDILGAVAVAS 1206
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: A0A7S1DEY3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DEY3_HEMAN) HSP 1 Score: 77.0 bits (188), Expect = 5.670e-13 Identity = 59/160 (36.88%), Postives = 81/160 (50.62%), Query Frame = 1
Query: 28 GDLNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQGTPVTELTRLSAVATET-GSWSGLLPMGRSSNDYMLTLTGHVADNLGA 504
G LN+T D F TG + LV + G L+ G Y F S T V S + + + + +NSPP G +VSP+SG A FS+ C WTDD ED+P+SY F T + ++ +AT T GS +LP S D +T+T V+D GA
Sbjct: 490 GPLNMTRPED---------FPTGLSSTTLVVKPGELSPGIRYIFRFSTTHVPSGAVSTADMFLAVNSPPKAGTFQVSPTSGTAGVTRFSMVCARWTDDLEDMPISYEFVATGIFNGRYASLIAPMATSTTGSAERILPSVDS--DRTVTVTAIVSDANGA 638
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: A0A5A8C2U3_CAFRO (GPS domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C2U3_CAFRO) HSP 1 Score: 77.0 bits (188), Expect = 5.710e-13 Identity = 57/181 (31.49%), Postives = 85/181 (46.96%), Query Frame = 1
Query: 76 AAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQGTPVTELTRLSAVATETGSWSGL--------------LPMGRSSNDYMLTLTGHVADNLGAQALSSMDDRGDTVAIRVTFTPATT 576
AA F+T + + GVL G + F L+ TD + G + +++ N PPY G ++ SP +G ++ SF+L WTD+ EDLPLSY F + + TP L A + + ++ L LP G + + LT+ V D LGA S G V + V P+TT
Sbjct: 335 AAAFATSTSAARVTLSPGVLPEGASLVFKLTVTDA-TGQAGSATVQLRTNEPPYAGFVQASPEAGTVLATSFTLQASQWTDNAEDLPLSYLFGFYRATPAAVLAAAEAGTSASVPFTPLGAAFQSSPLLENAPLPQGAGAG-HNLTIAVRVRDALGAVVESFAGQDGQPVTVSVA-PPSTT 512
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Match: A0A5A8DPK7_CAFRO (GPS domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DPK7_CAFRO) HSP 1 Score: 77.0 bits (188), Expect = 5.870e-13 Identity = 57/181 (31.49%), Postives = 85/181 (46.96%), Query Frame = 1
Query: 76 AAFFSTGKTRKILVARAGVLTVGGTYTFLLSATDVRSNSTGFSQLEVHLNSPPYGGHLEVSPSSGDAISQSFSLSCLAWTDDTEDLPLSYTFSYTQGTPVTELTRLSAVATETGSWSGL--------------LPMGRSSNDYMLTLTGHVADNLGAQALSSMDDRGDTVAIRVTFTPATT 576
AA F+T + + GVL G + F L+ TD + G + +++ N PPY G ++ SP +G ++ SF+L WTD+ EDLPLSY F + + TP L A + + ++ L LP G + + LT+ V D LGA S G V + V P+TT
Sbjct: 2215 AAAFATSTSAARVTLSPGVLPEGASLVFKLTVTDA-TGQAGSATVQLRTNEPPYAGFVQASPEAGTVLATSFTLQASQWTDNAEDLPLSYLFGFHRATPAAVLAAAEAGTSASVPFTPLGAAFQSSPLLENAPLPQGAGAG-HNLTIAVRVRDALGAVVESFAGQDGQPVTVSVA-PPSTT 2392 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig82.19902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig82.19902.1 >prot_S-ischiensis_contig82.19902.1 ID=prot_S-ischiensis_contig82.19902.1|Name=mRNA_S-ischiensis_contig82.19902.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=193bp LTVEWDQGEGDLNLTSKVDGSGQGWAAFFSTGKTRKILVARAGVLTVGGTback to top mRNA from alignment at S-ischiensis_contig82:12490..15310- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig82.19902.1 ID=mRNA_S-ischiensis_contig82.19902.1|Name=mRNA_S-ischiensis_contig82.19902.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2821bp|location=Sequence derived from alignment at S-ischiensis_contig82:12490..15310- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig82:12490..15310- >mRNA_S-ischiensis_contig82.19902.1 ID=mRNA_S-ischiensis_contig82.19902.1|Name=mRNA_S-ischiensis_contig82.19902.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1158bp|location=Sequence derived from alignment at S-ischiensis_contig82:12490..15310- (Schizocladia ischiensis KU_0333)back to top |