mRNA_S-ischiensis_contig8.19803.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: A0A6H5JYJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ7_9PHAE) HSP 1 Score: 195 bits (496), Expect = 2.030e-56 Identity = 93/167 (55.69%), Postives = 121/167 (72.46%), Query Frame = 2
Query: 149 ECLSRQLGFVPTNVVGVVARSDNGDPTVVKLYPLTASPKALRACRTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEAL 649
E + RQLGF PTNV + AR+ G+PTV++LYPL S K RA ERQPFPT YWL+CP LKA +S+LE +GLI EW+ R+Q + ++ +MEAAHKSYA++RW LL+ +D+ +K GWE + G VAG+ +P IKCLHTH+AH+L TGR N+VGKW EAL
Sbjct: 32 EVIHRQLGFRPTNVHSIAARAMTGEPTVLRLYPLAVSLKGARARNAERQPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPGIMADMEAAHKSYAEERWSLLSAEDVDTIKRQGWEKSFSNG--VAGIVQPRHIKCLHTHFAHFLATGR--NVVGKWTQEAL 194
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: A0A1W0AC20_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC20_9STRA) HSP 1 Score: 144 bits (363), Expect = 9.520e-37 Identity = 85/179 (47.49%), Postives = 107/179 (59.78%), Query Frame = 2
Query: 146 LECLSRQLGFVPTNVVGVVARSDNG----DPTVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEALR-LEAT 664
L L R LG VP N++ VVA +N +P V+ LYPL A + R +PFPTTYWL +LK +S LE G + + R+ N +EME AH+SYAD RW LLT D+ V+K WE A+ G+AG+R +KCLHTHYAHYL T + NLVGKWV EAL L+AT
Sbjct: 42 LLALERNLGSVPNNLIRVVATHENAQHCNEPAVLLLYPLRNCMDAYKKHHRAYIEPFPTTYWLASTELKEKVSILEGMGFVEIFTDRLVANPQYAKEMEDAHQSYADFRWSLLTPRDIQVIKAKQWEHAI-KDVGIAGIRNRASVKCLHTHYAHYLAT--KSNLVGKWVHEALMDLKAT 217
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: A0A1V9Z5R7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5R7_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.830e-35 Identity = 80/178 (44.94%), Postives = 106/178 (59.55%), Query Frame = 2
Query: 134 DDGDLECLSRQLGFVPTNVVGVVAR---SDNG-DPTVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEALR 652
D L + R LG+VP N++ V A +++G +P V++LYPL A + R +PFPTT+WL +LK +S LE G + + R++ N Q ME AHK+YAD RW LLT D+ +V WE AL G+AG+R +KCLHTHYAHYL TG NLVG WV EAL+
Sbjct: 39 DASVLAAIERNLGYVPNNLIRVAAMHVSAEHGHEPAVLQLYPLRNCMDAYKKHERAYIEPFPTTFWLASTELKEKVSVLEGMGYVEIFTDRLEANATYRQAMEDAHKNYADLRWGLLTSRDIAIVASKHWERAL-KDVGIAGIRNRASVKCLHTHYAHYLATGD--NLVGAWVHEALQ 213
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: A0A3R7HVX3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HVX3_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.060e-35 Identity = 80/183 (43.72%), Postives = 107/183 (58.47%), Query Frame = 2
Query: 143 DLECLSRQLGFVPTNVVGVVA---------RSDNGD----PTVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEAL 649
D+ + +LG+VP N+V V A RS +G P V+ LYPL + A + R + +PFPT YWL +LKA +S LE + E Q R++ +EA ++M H+ YA+ RW +LTE DL VVK GWE L G+AG+R +KCLHTHYAHYL TG NL+G+WV E L
Sbjct: 22 DVALIQEELGYVPNNLVRVSAFVDSEGRASRSCSGSADQRPAVLLLYPLRNAEDAYKKKQRAKVEPFPTIYWLASTELKARVSTLEDEQYVMELQRRLEADEASKEKMAQNHREYAEQRWRMLTEHDLGVVKGRGWEFVLRD-VGIAGIRDFTNVKCLHTHYAHYLATGN--NLIGEWVQELL 201
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: M4BYE9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYE9_HYAAE) HSP 1 Score: 136 bits (342), Expect = 5.530e-34 Identity = 77/182 (42.31%), Postives = 107/182 (58.79%), Query Frame = 2
Query: 143 DLECLSRQLGFVPTNVVGVVARSD-------NGD-----PTVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEAL 649
++ + + LGFVPTN+V V A D +GD P V+ LYPL + A + R +PFPT YWL+ P+LKA +S LE + + Q R+ NE ++M H+ YA +RW ++T DD+ +VK WE L G+AG+R +KCLHTHYAHYL TG+ NL+G+WV E L
Sbjct: 13 EVALVRQDLGFVPTNLVRVSAFVDRDGCTSRSGDSKDHLPAVLLLYPLRNAESAYKKKQRALVEPFPTIYWLSSPELKARVSALEDQQFVLTLQHRLDTNEGAKEKMAQCHREYAAERWNMMTPDDVALVKGRRWEFVLRD-VGIAGIRDFTNVKCLHTHYAHYLATGK--NLIGEWVQELL 191
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: A0A067CIQ7_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIQ7_SAPPC) HSP 1 Score: 136 bits (342), Expect = 9.910e-34 Identity = 78/178 (43.82%), Postives = 104/178 (58.43%), Query Frame = 2
Query: 131 VDDGDLECLSRQLGFVPTNVVGVVARSDNGD----PTVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEAL 649
VD L + R LG+VPTN++ V A ++ + P V+ LYPL A + R +PFPTT+WL +LK +S LE G + + R+ N L+ M AH+SYAD R++LLT D +V+ WE AL G+AG+R +KCLHTHYAHYL T + NLVG WV EAL
Sbjct: 39 VDPATLGAIERNLGYVPTNLITVAAFHESDEHGHEPAVLMLYPLRNCMDAYKKHERAYIEPFPTTFWLASTELKEKVSVLEGMGFVEVFTERLTSNPEYLEAMAMAHQSYADLRYDLLTPRDEAIVEAKRWERAL-KHVGIAGIRNRASVKCLHTHYAHYLAT--KNNLVGAWVQEAL 213
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: A0A2P4Y3U7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3U7_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.390e-32 Identity = 75/189 (39.68%), Postives = 108/189 (57.14%), Query Frame = 2
Query: 137 DGDLECLSRQLGFVPTNVVGVVA------------RSDNGDPTVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEALRLEAT 664
D ++ + ++LGFVP N+V V A S++ P V+ LYPL + A + R + +PFPT YWL +LKA +S LE + + Q R+ +EA ++M +H+ YA+ RW ++T+ DL +VK WE L G+AG+R +KCLHTHYAHYL TG N +G+WV E L AT
Sbjct: 14 DVEVALVQQELGFVPNNLVKVSAFVDSKGHTSHSRESEDYRPAVLLLYPLRNAEDAYKKKQRAKVEPFPTIYWLASTELKARVSTLEDQQYVLSLQHRLDTDEAAKEKMAQSHREYAEQRWRMMTQHDLNLVKGRHWEFVLRD-VGIAGIRDFTNVKCLHTHYAHYLATGN--NQIGEWVQELLDSTAT 199
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: F0W810_9STRA (Uncharacterized protein AlNc14C32G2960 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W810_9STRA) HSP 1 Score: 130 bits (328), Expect = 5.440e-32 Identity = 68/177 (38.42%), Postives = 107/177 (60.45%), Query Frame = 2
Query: 131 VDDGDLECLSRQLGFVPTNVVGVVARSDNGDP---TVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEAL 649
V++ D + QLGF+P N+V V + GD VV LYPL + +A + RT +PFPT YWL LKA +S LE++G + E Q +++ + L+ ++++H+ YA RW +LTE+D ++V+ W+ L G+ G++ +KCLH HYAHYL + + N++G+WV E L
Sbjct: 13 VNEDDAADIMEQLGFIPNNLVKVASYIPKGDKHQVAVVLLYPLKSDLQAYKVKQRTAIEPFPTIYWLVSKDLKARVSLLESQGKLQEIQHKLKHSVQALESIKSSHEQYASMRWSMLTENDKLLVEKMKWKYPL-EDVGIGGIQEFTYVKCLHVHYAHYLASDGKENIIGRWVQELL 188
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: G4ZX89_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZX89_PHYSP) HSP 1 Score: 130 bits (326), Expect = 1.500e-31 Identity = 74/184 (40.22%), Postives = 103/184 (55.98%), Query Frame = 2
Query: 143 DLECLSRQLGFVPTNVVGVVA--------------RSDNGDPTVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEAL 649
D+ + +LG+VP N+V V A S + P + LYPL ++ A + R + +PFPT YWL +LKA +S LE + + Q R+ +EA Q M+ +H+ YA+ RW ++T DL +VK WE L G+AG+R +KCLHTHYAHYL TG NLVG+WV E L
Sbjct: 20 DVAQVREELGYVPNNLVKVAAFVAGDGSGRTSRVRGSADQRPATLLLYPLRSAEDAYKKKQRAKVEPFPTIYWLASTELKARVSALEDQQFVLTLQHRLDADEAAKQRMKESHREYAEQRWRMMTAHDLELVKGRRWEFFLRD-VGIAGIREYTNVKCLHTHYAHYLATGN--NLVGEWVQELL 200
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Match: A0A024G9M3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9M3_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.860e-31 Identity = 69/177 (38.98%), Postives = 105/177 (59.32%), Query Frame = 2
Query: 131 VDDGDLECLSRQLGFVPTNVVGVVARSDNGDP---TVVKLYPLTASPKALRAC-RTERQPFPTTYWLTCPKLKADISRLETRGLINEWQARVQGNEALLQEMEAAHKSYADDRWELLTEDDLVVVKDNGWEAALGPGAGVAGLRRPDQIKCLHTHYAHYLGTGRRINLVGKWVDEAL 649
V++ D + QLG++P N+V V + + + VV LYPL + KA +A RT +PFPT YWL LKA +S LE++G + E Q R++ + L ++++H+ YA RW +LTE+D +V+ W L G+ G++ +KCLH HYAHYLG+ + N++G WV E L
Sbjct: 13 VNEDDARDILEQLGYIPNNLVRVASYTSKANEHKVAVVLLYPLKSDLKAYKAKQRTAIEPFPTIYWLVSKDLKARVSLLESQGKLQEIQQRLKLSIEALASIKSSHEQYASMRWNMLTENDKFLVEKMKWRYPL-QNVGIGGIQDFTYVKCLHVHYAHYLGSNGKENIIGHWVQELL 188 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19803.1 >prot_S-ischiensis_contig8.19803.1 ID=prot_S-ischiensis_contig8.19803.1|Name=mRNA_S-ischiensis_contig8.19803.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=185bp MGVDDGDLECLSRQLGFVPTNVVGVVARSDNGDPTVVKLYPLTASPKALRback to top mRNA from alignment at S-ischiensis_contig8:4121167..4127183- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19803.1 ID=mRNA_S-ischiensis_contig8.19803.1|Name=mRNA_S-ischiensis_contig8.19803.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6017bp|location=Sequence derived from alignment at S-ischiensis_contig8:4121167..4127183- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:4121167..4127183- >mRNA_S-ischiensis_contig8.19803.1 ID=mRNA_S-ischiensis_contig8.19803.1|Name=mRNA_S-ischiensis_contig8.19803.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1110bp|location=Sequence derived from alignment at S-ischiensis_contig8:4121167..4127183- (Schizocladia ischiensis KU_0333)back to top |