mRNA_S-ischiensis_contig8.19757.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A835ZCW5_9STRA (Trypsin-like cysteine/serine peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW5_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 4.500e-7 Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 547 RYTISDAAEKAMPCVVNITCGMTTGV---PASERDLLLSKGSGFVLSPGGLVVTNAHV 711
RYTISDAAEK P VVNITCG P + ++ GSGF+L+ G++VTNAHV
Sbjct: 97 RYTISDAAEKCAPSVVNITCGSYNSAYFTPNNPLPFGMTGGSGFILTADGIIVTNAHV 154
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: UPI0014039416 (serine protease HTRA1-like n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014039416) HSP 1 Score: 52.4 bits (124), Expect = 1.640e-5 Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 556 ISDAAEKAMPCVVNITCGMTTGVPASERDLLLSKGSGFVLSPGGLVVTNAHVVD 717
I+D EK P VV++ + VP S R++ ++ GSGF++S GGL+VTNAHV+
Sbjct: 8 IADVVEKIAPAVVHLE--LYRRVPFSNREVSVASGSGFIISEGGLIVTNAHVLS 59
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A7S1XWE8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWE8_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.010e-5 Identity = 33/66 (50.00%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 538 PFDRYTISDAAEKAMPCVVNITCGMTTGVPASERDLL----LSKGSGFVLSPGGLVVTNAHVVDPA 723
P I+DAAE A+P VVNIT G+ S R + LS GSGF++ GLVVTNAHVV A
Sbjct: 10 PLSANFIADAAEVALPAVVNITAGVV-----SHRGFIPQQGLSAGSGFLIRSDGLVVTNAHVVQGA 70
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A425DN34_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DN34_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 3.560e-5 Identity = 31/64 (48.44%), Postives = 36/64 (56.25%), Query Frame = 1
Query: 538 PFDRYTISDAAEKAMPCVVNITCGMTTGVPASERDLLLSKGSGFVLSPGGLVVTNAHVVDPATR 729
P R +I+DA EKA P VVNIT S GSGF++ P GLVVTNAHVV +R
Sbjct: 22 PMTRNSIADAVEKAAPGVVNITI--------YSHHQPTSSGSGFLIDPSGLVVTNAHVVAHVSR 77
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A397CTH5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CTH5_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 3.610e-5 Identity = 31/64 (48.44%), Postives = 36/64 (56.25%), Query Frame = 1
Query: 538 PFDRYTISDAAEKAMPCVVNITCGMTTGVPASERDLLLSKGSGFVLSPGGLVVTNAHVVDPATR 729
P R +I+DA EKA P VVNIT S GSGF++ P GLVVTNAHVV +R
Sbjct: 22 PMTRNSIADAVEKAAPGVVNITI--------YSHHQPTSSGSGFLIDPSGLVVTNAHVVAHVSR 77
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A3L6VQY0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VQY0_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 4.280e-5 Identity = 31/64 (48.44%), Postives = 36/64 (56.25%), Query Frame = 1
Query: 538 PFDRYTISDAAEKAMPCVVNITCGMTTGVPASERDLLLSKGSGFVLSPGGLVVTNAHVVDPATR 729
P R +I+DA EKA P VVNIT S GSGF++ P GLVVTNAHVV +R
Sbjct: 22 PMTRNSIADAVEKAAPGVVNITI--------YSHHQPTSSGSGFLIDPSGLVVTNAHVVAHISR 77
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A803J8E3_XENTR (PDZ domain-containing protein n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A803J8E3_XENTR) HSP 1 Score: 54.7 bits (130), Expect = 5.130e-5 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 556 ISDAAEKAMPCVVNITCGMTTGVPASERDLLLSKGSGFVLSPGGLVVTNAHVV 714
I+D AE+ P VVNI + P S R++ +S GSGF++SP GL+VTNAHVV
Sbjct: 116 IADVAERTAPAVVNIE--ILDRHPFSRREVAVSSGSGFLVSPDGLIVTNAHVV 166
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A397ACI8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACI8_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 5.470e-5 Identity = 31/64 (48.44%), Postives = 36/64 (56.25%), Query Frame = 1
Query: 538 PFDRYTISDAAEKAMPCVVNITCGMTTGVPASERDLLLSKGSGFVLSPGGLVVTNAHVVDPATR 729
P R +I+DA EKA P VVNIT S GSGF++ P GLVVTNAHVV +R
Sbjct: 22 PMTRNSIADAVEKAAPGVVNITI--------YSHHQPTSSGSGFLIDPSGLVVTNAHVVAHVSR 77
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A5D6XRN1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRN1_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 5.490e-5 Identity = 30/63 (47.62%), Postives = 36/63 (57.14%), Query Frame = 1
Query: 541 FDRYTISDAAEKAMPCVVNITCGMTTGVPASERDLLLSKGSGFVLSPGGLVVTNAHVVDPATR 729
R I+DA EKA+P VVN+ A + S GSGFV++P GLVVTNAHVV R
Sbjct: 70 LSRNFIADAVEKAIPAVVNV---------AVDSGYFSSNGSGFVIAPNGLVVTNAHVVARCNR 123
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Match: A0A397EHW2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EHW2_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 7.090e-5 Identity = 31/63 (49.21%), Postives = 35/63 (55.56%), Query Frame = 1
Query: 538 PFDRYTISDAAEKAMPCVVNITCGMTTGVPASERDLLLSKGSGFVLSPGGLVVTNAHVVDPAT 726
P R +I+DA EKA P VVNIT S GSGF++ P GLVVTNAHVV T
Sbjct: 22 PMTRNSIADAVEKAAPGVVNITI--------YSHHQPTSSGSGFLIDPTGLVVTNAHVVAHVT 76 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19757.1 >prot_S-ischiensis_contig8.19757.1 ID=prot_S-ischiensis_contig8.19757.1|Name=mRNA_S-ischiensis_contig8.19757.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=179bp MSRGVAVAAAVATASRRHLVTPRAWRRRVGSVAVPPAAQRLQSLTATGHDback to top mRNA from alignment at S-ischiensis_contig8:3701881..3705799+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19757.1 ID=mRNA_S-ischiensis_contig8.19757.1|Name=mRNA_S-ischiensis_contig8.19757.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3919bp|location=Sequence derived from alignment at S-ischiensis_contig8:3701881..3705799+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:3701881..3705799+ >mRNA_S-ischiensis_contig8.19757.1 ID=mRNA_S-ischiensis_contig8.19757.1|Name=mRNA_S-ischiensis_contig8.19757.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1074bp|location=Sequence derived from alignment at S-ischiensis_contig8:3701881..3705799+ (Schizocladia ischiensis KU_0333)back to top |