|
|
Homology
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: A0A835YHH5_9STRA (Glutathione peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH5_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.170e-59 Identity = 96/161 (59.63%), Postives = 121/161 (75.16%), Query Frame = 2
Query: 110 SFREKLRFECLAGGGATKALTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEAL 592
++ KL FE AG T L+P F GKAVLVVNTAS CGLTPQLKE+Q+VH+RF+AQG VLGVP NDFGGQEPWEE+K+ FY+ ++GVTFPLA+K V P+AH Y A+ ++ GEDA P+WNFHK+L GDL+GVF + P + E+++AIEEAL
Sbjct: 2 AYSAKLDFEGCAG---TDKLSPESFAGKAVLVVNTASKCGLTPQLKEMQLVHKRFKAQGLIVLGVPCNDFGGQEPWEEQKIMDFYKSKYGVTFPLAAKVHVRGPNAHPLYAALRKDLGEDALPQWNFHKFLFSGHGDLLGVFGHIIPPTDVEVSEAIEEAL 159
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: W4GP68_9STRA (Glutathione peroxidase n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP68_9STRA) HSP 1 Score: 165 bits (418), Expect = 5.170e-45 Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 2
Query: 167 LTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEAL 592
L P+ F+ K +LVVNTAS CGLTPQLK LQ +H R+ A+G TVL VPSNDFG QEP ++ + FY+ E+ VTFP+ +KTKVL DAH FY A+ E + + SP WNF K++VD GDL VF + PLE E+ + IE L
Sbjct: 42 LPPSLFQQKIILVVNTASKCGLTPQLKSLQELHTRYAAKGLTVLAVPSNDFGAQEPEDDATLEAFYKSEYNVTFPITTKTKVLGDDAHPFYQAIVEHYTNEVSPAWNFEKFIVDESGDLRAVFPRNVDPLEPEVIETIENLL 183
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: D7G3E9_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E9_ECTSI) HSP 1 Score: 166 bits (419), Expect = 1.210e-44 Identity = 80/139 (57.55%), Postives = 100/139 (71.94%), Query Frame = 2
Query: 74 QRAGPARCLSTSS---FREKLRFECLAGGGATKALTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPR 481
++AG T + KL F+ + G K + P DFEGKAVLVVNTASLCGLTPQLKEL++VH+RF+ +G VLGVPSNDFG QEPW+EEK++ FY K+ GVTFPL SKT V+ P+AH Y+AV EFG+D P+
Sbjct: 104 EQAGRGAAAETGTAIPLGSKLAFKAIVDG---KPMPPDDFEGKAVLVVNTASLCGLTPQLKELELVHKRFRGEGLVVLGVPSNDFGAQEPWDEEKIKDFYAKDFGVTFPLTSKTVVVGPEAHPLYSAVIAEFGQDVGPQ 239
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: A0A2N3EA54_9PROT (Glutathione peroxidase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EA54_9PROT) HSP 1 Score: 160 bits (404), Expect = 1.640e-43 Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 2
Query: 128 RFECLAGGGATKALTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEALP 595
+FE L G +AL + F GK VL+VNTAS CG TPQ +ELQ + R++ +G TV+GVPSNDFG QEP EE++ F E + V+FPL +K +V+ AH FY + E GEDA PRWNFHKYL+ G+LV ++ S +SPL+ L IE+ LP
Sbjct: 5 QFEFLTAAG--EALPLSRFSGKPVLIVNTASRCGFTPQYRELQGLWERYRTRGLTVIGVPSNDFGAQEPGTEEEIVEFCEINYSVSFPLTAKQQVVGAAAHPFYLWITETAGEDARPRWNFHKYLIGPSGELVDIYPSKVSPLDVALVAEIEKLLP 158
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: UPI000835608E (glutathione peroxidase n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI000835608E) HSP 1 Score: 160 bits (404), Expect = 1.970e-43 Identity = 72/132 (54.55%), Postives = 93/132 (70.45%), Query Frame = 2
Query: 197 VLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEAL 592
+LVVNTAS CG TPQ LQ +H ++ QG TV+GVPSNDFG QEP +EE++R F +E+GV+FPL +K V+PPD H FY +A E G+ A P+WNFHKYLV GDL G++DS P ++ + IE AL
Sbjct: 26 ILVVNTASECGTTPQYAGLQALHEQYADQGLTVIGVPSNDFGEQEPGDEEEIRAFCRREYGVSFPLTAKQHVIPPDEHPFYRDIASELGDVARPQWNFHKYLVGTDGDLAGLWDSQTEPRSADVIETIETAL 157
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: A7HPR0_PARL1 (Glutathione peroxidase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HPR0_PARL1) HSP 1 Score: 159 bits (402), Expect = 3.210e-43 Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 2
Query: 161 KALTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEAL 592
+AL + F GK +L+VNTAS CG TPQ +EL+ + R++A+G T++GVPSNDFG QEP EE++ F E + +TFPL +K +V+ +AH FY V+E GEDA PRWNFHKYLV G L G++ S +SPL+ L D IE L
Sbjct: 14 EALPLSRFSGKPILIVNTASRCGFTPQYRELEGLWERYRARGLTIIGVPSNDFGAQEPGTEEEIVEFCEVNYSITFPLTAKQQVVGAEAHPFYLWVSEVAGEDARPRWNFHKYLVGPDGALAGIYPSKVSPLDKILVDEIERLL 157
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: A0A6N6VR76_9HYPH (Glutathione peroxidase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VR76_9HYPH) HSP 1 Score: 159 bits (402), Expect = 3.320e-43 Identity = 76/146 (52.05%), Postives = 101/146 (69.18%), Query Frame = 2
Query: 161 KALTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEALPA 598
+AL + FEG+A+L+VNTAS CG TPQ +ELQ + R++ +G V+GVPSNDFG QEP E ++ F E + + FPL +K V+ +AH FY VAE GE A+PRWNFHKYL+ +G+LV V+ S +SPL TEL + IE L A
Sbjct: 14 EALPLSQFEGRAILIVNTASRCGFTPQYRELQGLWERYRGRGLVVIGVPSNDFGAQEPGTETEILEFCEVNYDIDFPLTAKEAVIGEEAHPFYKWVAEVGGEGAAPRWNFHKYLIGPEGELVNVYSSKVSPLSTELVNEIEALLGA 159
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: A0A2D8RYR8_9HYPH (Glutathione peroxidase n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D8RYR8_9HYPH) HSP 1 Score: 159 bits (402), Expect = 3.640e-43 Identity = 76/144 (52.78%), Postives = 100/144 (69.44%), Query Frame = 2
Query: 161 KALTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEAL 592
+AL + FEGK VL+VNTAS CG TPQ +ELQ + +++ +G TV+GVPSNDFG QEP E+++ F E + VTFPL +K +V+ +AH FY V+E GEDA PRWNFHKYL+ G LV ++ S +SPL+ L D IE L
Sbjct: 18 EALPLSRFEGKPVLIVNTASQCGFTPQYRELQGLWEQYRQRGLTVIGVPSNDFGAQEPGTEQEIATFCEVNYSVTFPLTAKQQVVGAEAHPFYLWVSEVAGEDARPRWNFHKYLIGPDGRLVNIYPSKVSPLDKALVDEIERLL 161
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: A0A4U8Z2U6_METTU (Glutathione peroxidase n=2 Tax=Methylocella tundrae TaxID=227605 RepID=A0A4U8Z2U6_METTU) HSP 1 Score: 159 bits (401), Expect = 4.500e-43 Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 2
Query: 161 KALTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEAL 592
+AL + F+GKAVLVVNTAS CGLTPQ + L+ ++R++Q G VLGVP+NDFG QEP E +++ F + + FP+ SK V+ PDAH FY V E GE A+P+WNFHKYL+D KG + G F S +P E+ +AIE+AL
Sbjct: 14 EALPLSTFKGKAVLVVNTASACGLTPQYEALEALYRKYQGAGLVVLGVPANDFGKQEPGTEAEIKQFCTVKFHIDFPMTSKEVVIGPDAHPFYQWVVSELGEAATPKWNFHKYLIDKKGAIAGTFGSRTAPDAPEVVEAIEKAL 157
BLAST of mRNA_S-ischiensis_contig8.19747.1 vs. uniprot
Match: A0A024TGF2_9STRA (Glutathione peroxidase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGF2_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.920e-43 Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 2
Query: 155 ATKALTPADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGGQEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDASPRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIE 583
++ AL P F+ K V+VVNTAS CGLTPQLK LQ +H R+ +G TVL VPSNDFGGQEP ++ + FY+ E+ V FP+ +K+KVL DAH FY A+ E + ++ SP WNF K++VD GDL VF + PLE E+ IE
Sbjct: 39 SSAALPPTLFQKKIVMVVNTASKCGLTPQLKSLQELHTRYADKGLTVLAVPSNDFGGQEPDDDATLEAFYKAEYNVAFPITTKSKVLGDDAHPFYKAIIEHYTDEVSPSWNFEKFVVDETGDLRAVFPRNVDPLEPEVIKTIE 181
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 160.2 |
| Seed ortholog evalue | 9.5e-37 |
| Seed eggNOG ortholog | 157072.XP_008878712.1 |
| KEGG rclass | RC00011,RC00982 |
| KEGG ko | ko:K00432 |
| KEGG Reaction | R00274,R07034,R07035 |
| KEGG Pathway | ko00480,ko00590,ko04918,map00480,map00590,map04918 |
| GOs | GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019725,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042592,GO:0042737,GO:0042743,GO:0042744,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0051920,GO:0055114,GO:0061687,GO:0061691,GO:0061692,GO:0065007,GO:0065008,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 |
| EggNOG free text desc. | glutathione peroxidase activity |
| EggNOG OGs | COG0386@1,KOG1651@2759 |
| EC | 1.11.1.9 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000 |
| Hectar predicted targeting category | mitochondrion |
| Ec32 ortholog description | Glutathione peroxidase |
| Ec32 ortholog | Ec-00_006580.1 |
| Exons | 6 |
| Model size | 1433 |
| Cds size | 582 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817301.0995061-UTR-S-ischiensis_contig8:3634295..3635121 | 1622817301.0995061-UTR-S-ischiensis_contig8:3634295..3635121 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3634296..3635121 - |
| 1695741008.6686466-UTR-S-ischiensis_contig8:3634295..3635121 | 1695741008.6686466-UTR-S-ischiensis_contig8:3634295..3635121 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3634296..3635121 - |
| 1622817301.2024035-UTR-S-ischiensis_contig8:3640578..3640603 | 1622817301.2024035-UTR-S-ischiensis_contig8:3640578..3640603 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3640579..3640603 - |
| 1695741008.7515922-UTR-S-ischiensis_contig8:3640578..3640603 | 1695741008.7515922-UTR-S-ischiensis_contig8:3640578..3640603 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3640579..3640603 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817301.1121218-CDS-S-ischiensis_contig8:3635121..3635199 | 1622817301.1121218-CDS-S-ischiensis_contig8:3635121..3635199 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3635122..3635199 - |
| 1695741008.685072-CDS-S-ischiensis_contig8:3635121..3635199 | 1695741008.685072-CDS-S-ischiensis_contig8:3635121..3635199 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3635122..3635199 - |
| 1622817301.124761-CDS-S-ischiensis_contig8:3635875..3635924 | 1622817301.124761-CDS-S-ischiensis_contig8:3635875..3635924 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3635876..3635924 - |
| 1695741008.6945343-CDS-S-ischiensis_contig8:3635875..3635924 | 1695741008.6945343-CDS-S-ischiensis_contig8:3635875..3635924 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3635876..3635924 - |
| 1622817301.1391544-CDS-S-ischiensis_contig8:3636733..3636810 | 1622817301.1391544-CDS-S-ischiensis_contig8:3636733..3636810 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3636734..3636810 - |
| 1695741008.7046084-CDS-S-ischiensis_contig8:3636733..3636810 | 1695741008.7046084-CDS-S-ischiensis_contig8:3636733..3636810 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3636734..3636810 - |
| 1622817301.153052-CDS-S-ischiensis_contig8:3638060..3638132 | 1622817301.153052-CDS-S-ischiensis_contig8:3638060..3638132 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3638061..3638132 - |
| 1695741008.7172623-CDS-S-ischiensis_contig8:3638060..3638132 | 1695741008.7172623-CDS-S-ischiensis_contig8:3638060..3638132 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3638061..3638132 - |
| 1622817301.1699784-CDS-S-ischiensis_contig8:3639226..3639329 | 1622817301.1699784-CDS-S-ischiensis_contig8:3639226..3639329 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3639227..3639329 - |
| 1695741008.727972-CDS-S-ischiensis_contig8:3639226..3639329 | 1695741008.727972-CDS-S-ischiensis_contig8:3639226..3639329 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3639227..3639329 - |
| 1622817301.1878977-CDS-S-ischiensis_contig8:3640375..3640578 | 1622817301.1878977-CDS-S-ischiensis_contig8:3640375..3640578 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3640376..3640578 - |
| 1695741008.7379804-CDS-S-ischiensis_contig8:3640375..3640578 | 1695741008.7379804-CDS-S-ischiensis_contig8:3640375..3640578 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3640376..3640578 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19747.1 >prot_S-ischiensis_contig8.19747.1 ID=prot_S-ischiensis_contig8.19747.1|Name=mRNA_S-ischiensis_contig8.19747.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=194bp
MTHLNLWRSVLRTSPLQRAGPARCLSTSSFREKLRFECLAGGGATKALTP ADFEGKAVLVVNTASLCGLTPQLKELQMVHRRFQAQGFTVLGVPSNDFGG QEPWEEEKVRGFYEKEHGVTFPLASKTKVLPPDAHAFYTAVAEEFGEDAS PRWNFHKYLVDAKGDLVGVFDSPMSPLETELTDAIEEALPAPA* back to topmRNA from alignment at S-ischiensis_contig8:3634296..3640603- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19747.1 ID=mRNA_S-ischiensis_contig8.19747.1|Name=mRNA_S-ischiensis_contig8.19747.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6308bp|location=Sequence derived from alignment at S-ischiensis_contig8:3634296..3640603- (Schizocladia ischiensis KU_0333) GGCTGCTTTGCCACCGGGGCTTACGATGACACACCTTAACCTGTGGCGGT
CGGTGCTGCGGACGAGTCCCTTGCAAAGGGCTGGACCCGCTAGGTGCTTG
TCGACGAGTTCCTTCCGTGAGAAATTGCGGTTCGAATGCCTGGCGGGTGG
CGGCGCGACAAAGGCTCTAACGCCGGCAGACTTCGAGGGAAAGGCAGTAC
TGGTCGTGAACACAGCATCGTTGTGCGGGTGAGAATTAATGCGCCCGCGA
TCGAGCGCGTTTAGCGTAGAGGATCACAGCCGCATGTATGCACATGCTGT
ACACTCTGCCTGCCTGTATTTGACTACTGGTATCAACCGACTGTCGTTGG
CATTCAATGCCAACCCCCTTCCAGTTTTACTAAACTTTTGTTTTGTTTTT
GGGGGATGGCGGACTGGTGACGTTTTACTATTATTTGTCGTGCCCACCCT
CTATGCTGCTTAGCTGCACCGGCAACGGTCTGATACACCGGCTTGAAGAT
AGTGCGCATGTGCAACCCTGCCATGGAGAGTGTTGGAGGTCCTCTGGAGA
GGTTGCATGGGCAGGGCATTAGCCTCTGGCTTCGCAGACAAGAGCTCACC
CATGACATTGGTCCGTGTTTCGCCGCTTTTCAATATGAGTACACGATCCA
CGCATTTGCCACCGTGCCGTTGCGCCCGGCACGCCTGCCTTTAAACAAGA
TGAGAGTGCGCGCTCCGCCACGCTGCTGCTCAGCCCATCGAGCCAGTCTC
GGCGGGGCGTGTGTTCAGTGGTATCTGGACTGCAGCAAGCGTGACGTGAA
TTCACCTGTGTTGAGGTACTCTGCACGTGTAAGTACTGCTATATGGTCAA
TGATGTCGGGACTACGGCAAGCACGATGTGAGTAGAGTACTTCGAAGTAC
GCATGTATGTACTCGAGTACATGCATACTGCACGGTATTGATCCCCATGT
ACTGTACGCGTACCCATACAGTGTTCCTACCGTACGCACCCGAGCACACA
AATATAGATACAGTCCAAGTGCTGCATGTATGTGTACCTGTACTCGAGTA
CCGTTACAGTAGTGCTTTGGTACTTGGAAGTACTTCCAGGTACGAAGTAG
TAGTTGATCCTCACCCGGGTTGCCAGGTGGCATCAACCAAACCACACACA
GGCATGCAGACTGTCACTACTACATAGTTCTGTTCTCTCAGTGTGCCACA
ACTCAAACAAGTAGGTATTGCCCATTGTTATGGCGCACTGCCTGCCTGCC
TGCCTGCCTGCCGCTCACTCCCAGACTAACGCCTCAGTTGAAAGAGCTGC
AGATGGTGCACCGGCGCTTCCAGGCCCAGGGGTTTACCGTGCTCGGGGTC
CCGTCCAACGATTTCGGGGGCCAGGAGGTGGGGAAGATGAAACGTTTGCT
GATTGCTTTGACGCTTGATAGTTCACGGTCGTGGTGTCTGGCGCAGAGGA
GAGAAGTCTGTTCGCCTATCATCGTACCGGGGTATGTAGAGTTGCTGTAC
ACTGTAGAGCGCTCCGACAATACCCACCCGGCCCGCTGTGCTACTGCGGC
GTACAGTACAGTACAGTACAGTATAGTACAGTACAGTGCAGTACAGTACA
GTATAGTACAGTGCAGTGCAGTACAGTACAGTATAGTGCAGTACAGTGCA
GTACAGTGCAGTACGGTACAGTACAGTACAGTACAGTACAGTAGTTCAAT
CGATGGCTCGTGCTTCCGGAAGAGAGTGGCCCCCTCTTTGACCGCGGTTG
GGGTACACCTATGATCTAAAGAACGAAATCTCTCGGAGACCGGGGGGCTC
CATACCCGGAGGAAGAACGCAAGCACTGTACAGACAGCACGTGTGTTGTG
CTCACTTCGAGCCATACATAGCCCGGAGGCCGTCGGCGGTACCACGCGCC
CCGACCTCTTGCGCGGCGAAGCAGCACTCGTACTTCGAGCTTTTAAGTAC
TCTTCCCTACTGACAGTCCTTGATGTACCGTAATTGTCAGAGAGATCTTG
CCCCCCCATGCCAATTTTTCGGAGAACTTTTCTCGCCAAATACTGGTCGG
ATTCGCGCAGGAAAACTCGGAAAATCTCCCTCCGGACCTGGGGGAACCTT
TCAGAGCGTCTTCGGGACAATTCAGTACCTTCCCGGTTAGAAATATTCCC
ATGAACATTGTCCCTTGGGGGCAAAATCTCTCCGACGACTACGGTACTTC
GAAGTACCTCAGTACGGCCTGCGCGCCCGCGCCGAACAGAGCTGTCCGTG
CCCCCCCCCCGGGGAGACAGCCACGCGCACCCTTACGTCTTCCGAGGTTG
GAAGGCTTTGCACTCCATGCCTCATCACATTCGCCTCGTGTGATGCAGGT
GGGAGAGCGCTTGCGACAGAAACGCATGAACCCTTTGTCCTGTAGGTGTA
CCTGTATCCCTCACCCCCCCTCACCCCCCTGCCCCTTTTTCCCTCCCGCG
ACCCCGTGGCCGGCGCACCAGCCATGGGAGGAGGAGAAGGTTCGGGGTTT
CTATGAGAAGGAGCACGGCGTTACCTTCCCGCTCGCGTCCAAGGTGAGTG
TGAGCTATGATGTTGCTGTGTCTGCGGCACCCAGTGTGTACGTAGTATGT
GTTCATTGGCTTACATAATTGTCTTGCGACATATCCTTGCAAGGCGCACA
TGGCCGACAGCCCAGAGTCAGGACTACGGATTTGCCCTCCGACAGGAGTA
CTGTACTGTAGCTATCTAGCCATTGACTCTCGCATCCCAACTAGGCTGCG
ACGGAGCACGCACGCTGGGTTTGCGCCGGCGCGAACGTATGTAGTGGTCT
CACGACTGCGGCAAGCGAAACGCGAGTACTTGTTTGTGCCGTGTACTGCA
CGAGTGTACTGTCCTCTAGTGTACTGCACGAGTGTACTGCATGAGTGTAC
TGTACTCTACTACAGTAGTGTACTGTACTCTACAAGTGTACTGTGCGAGT
GTACTGTACTTGTATCTCGAGTATTAGTGTACTGCATGAGTGTACTGTAC
TCTACAAGTGCACTGTACGAGTGTACTGTACTGTGCGAGTGTACTGTGCG
ATTGTACTGCAGGAGTGTACTGCATGAGTGTACTGCATGAGTATGCTGTA
CAAGTGTACTGTATGAGTGTACTGTAAAGTATACTGTACGAGTGTACTGT
GCGTGTGTACTGTACAAGTGTGCTGCACGAGAAGAGTGTACTGTACTTGT
GGCTTCCGGGGGTGGGGGGCCCCGAGCTCGCGCAAGTAGGGACACCTCTT
TTCCCCCACTCGCTTGTTCGTCCTATCGCGAAACACCGCCAGCACGCCCG
CACACCGCAGCACCTACCTCTGCGCAAGTCGCCCGCGCTCCTTCAGAGAC
GCTTCTATTGCGCCCTTGGACCCTCCCCTCCACCCGAACTGACCCACCCA
CCCGTCTTGTTCCCGTACCCTCCACCAGTAGCCGCCCACGTGCCCGCCCC
GCCTATTGCACCCAGTGATGGAATATCTAAGCAAATCAATATATTTATCG
ACAGTATTGATCTATTTTGAGTGGTAGACAAGCGGCGAGTTCCAGGCCCC
GTGCCAAAAGGCTTGTCCCAAAACAGGACTCAACGAAGCCCTTCTTCCCC
TCGCAGAACATATATCTATCGATAGTTTGACCCACACTCAATCCAAGTAG
TTAGTAACGCCACCCACAAAATCGGTCGAGCCCAATAACTGTCTACTGAT
CATATTCCATCACTGATGGCACCCAACCACCCCTACGGCCGCCCGCCTGC
CCACCTTGGCACGGCCGCTTTGCTGGGTGTGGGCGGACGCCAGACCAAGG
TGTTACCGCCGGATGCACACGCCTTCTACACGGCGGTGGCTGAGGAGTTT
GGGGAGGACGCATCCCCCAGGTGCAGTGCTCGGAAAAGCCTTTCGAGAGT
GCTCGCTATGGTAACTTGTAAATCCGGCGTGCTCCGTCCCGGTCCCGGCC
TGGTTGGGGCGCAGGTGCCGAAAAGAGCACCTGCAGGGGGGCAAACTCGA
AGTTTTGACTTAGGTATGTGCTACGTAGTAGTATAGTTAGTAGTACTCAC
ATGGTTTGACTGTATCCATGTGTAGAGTATAGAGTAGCGCTTGGTATCGT
TGAGAGTCAATGCCGAACAAGTTTCTCCTGCAGGAGGGCAAACCCGAAGT
TTTGACTTAGGCATATGCGACGTAGAAGTATAGTTGGTAGTACTCAAATG
GTTTGACTGTATCCATGTGCAGAGTATAGAGCAGTACTTCGAAGTACTTG
GTATCATTGAGAGTCAATGTCGAAGAAGCTGCTCCTGCAGGAGGGCAAAC
CCAAAGTTTTGACTTAACTATATACTTTAGTAGAGTAGCATAGATAGTAG
TACTTCCATGGTTTGACTGTATCCACGCATAGAGTGGGATAGTTGAGAGT
CAAATGCTGAAAAAGCTGCTCCTGCAGGATTGCAAACCCAAAGTGTAACT
TTGGGCTGTCGACTAAGCACGCCTAGCAAGGTTATGACGCAGGACAAGCC
ACGCACCCCACTCTCCGGTTGTGTGTGTGTGTGTGTGTGACGCGCTGCCA
AGTATTGTCCATGGCAGCCCACTCAAGACCCCCACCCCCTCCTCCTCCCG
CCCTTCCCCGCTGTCGCCCCATTCTGTGACCCCCCCCTCCCCCCCCTCCC
GGCCGCCACCACCACCCCACTGACATCAGGTGGAATTTTCACAAGTACCT
GGTGGATGCCAAGGGAGATCTTGTCGGGGTGAGCCTAAGCTATGGCTCAA
CAGGGTACCGTGCTGTGCTGTGCTGTGCTGGTGTGGTCTACAAACGCTTG
CCTTTCCCCTCCTGGCTGCACTGTAGCGTACTGTAGTGTAGTGTGTGTAG
GTTCCTTCAAAGTAGTGTAGTGTGTGCTGCTGTACAGTACAGTACAGTAC
AGCACTGTACTGCACTGTACGGCTGCTGTACGGTCCTGTACTGTACTGTG
CTGGACTATAGTGTAGCGTACTGCACTACTGTACTTGTGCTGTACTATAG
TGTGCTGTACTCTTCTGTACTTGAAGTATGACTGCTGTACGGTACAATAC
GGTACTGTAGGGGCAGGTGTTCCCCTGGTGACTTGTCATCCATTCTCCTC
CCCCCCGCCCTGGCGACTTCCGTTCTCCTTGACTTCTGTAGGATATACTG
TACTGCGCTGCACTGTGCAGTATGACTGCTGTATTGAACTACTATGTACT
ACTTGAAGCACACTACTTGGAAGTACCACTTGGAAGTAGCAGTATGTTGT
ACTGTATTGTACTGTATTCACTGCACTGTGCTGTGCGGTACTGTGGTGTA
CTGTGCTGTGCTGTACTGTACACTGTACTGTACTGTACTTTGCCGTGCTG
TACTGAACTGTACTGTACTGTCCTGTCCTGTACTATGCTGTGCTGTACTG
GCAGGTGTTTGACTCCCCCATGAGCCCTCTGGAGACGGAGCTCACGGACG
CCATCGAGGAGGCCCTCCCCGCGCCCGCATAGCCCGCGGAAGGCGGCGGC
ACACTGAAGCATGATAGCAGGGTTCTGCAGTAGCGCCGGCTGTGGGCTTG
AGTACTACTTCAAAGCACAGTAGTCCTCTTACTTGCGTGCGAAGCACAAT
GTAACAGTACCTGTACGAGTACACTATAAATAACCCCACGAAACCGTGAA
CTGGAGTGCACTGCCTGTACTGCTGTCTCCAAAGAGGCCAAGGGTTGCAA
AGGCAAACGCTCGGGGCTCTCCCGTGCCGCTGTGGCCAGGCACTTGCTCG
AGCCCAGCCGGGTACTTGTAGGCAACTGGGACACACCCACTGTGGGCTGG
TTGAAGGCGTGGCGCAAGAACGCCTGACCGAGCCCGGCTGGGCGCGCTTG
AGCAGGTCATCCGATCTTGGCAGAACGCTTTAACCATCCCGTAGCGGGGA
CCTCGTACCCGGTGGGGCTCGAGCAGCTCATGTTTTGGCGAGCGGTTCAA
TTAACCCGTAATTTATAGTACTCGTGCTCGTATTCGAGTAGTACTGTGCT
GCAGAACTCTGTGTCATGGCCCTATATGTACACTACTGTAGCACTTTGAA
TACCATTACTCGTACTTTGTACCCTACAAGTCGTACAGTTAGAGGCAAGG
GTTCTGGTGCCACACCTGGCATCGATCGCATGATTGCCGTTCTGAATTCC
GGAAGTACTTCCTGAAGAGACAACGAAACTTCATTGGGAAACTCAGCTGC
TGTTTCCGTCAGAGAAAGCATTCATCGTGCTCTGGTCGCAGCTTACCCAT
ACCCCGGGGCGGCTGAAGCCAGTGGGACAATGGGTCGGGCCTGTGCTGCA
TGCCTGGT back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:3634296..3640603- >mRNA_S-ischiensis_contig8.19747.1 ID=mRNA_S-ischiensis_contig8.19747.1|Name=mRNA_S-ischiensis_contig8.19747.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1164bp|location=Sequence derived from alignment at S-ischiensis_contig8:3634296..3640603- (Schizocladia ischiensis KU_0333) ATGACACACCTTAACCTGTGGCGGTCGGTGCTGCGGACGAGTCCCTTGCA AAGGGCTGGACCCGCTAGGTGCTTGTCGACGAGTTCCTTCCGTGAGAAAT TGCGGTTCGAATGCCTGGCGGGTGGCGGCGCGACAAAGGCTCTAACGCCG GCAGACTTCGAGGGAAAGGCAGTACTGGTCGTGAACACAGCATCGTTGTG CGGATGACACACCTTAACCTGTGGCGGTCGGTGCTGCGGACGAGTCCCTT GCAAAGGGCTGGACCCGCTAGGTGCTTGTCGACGAGTTCCTTCCGTGAGA AATTGCGGTTCGAATGCCTGGCGGGTGGCGGCGCGACAAAGGCTCTAACG CCGGCAGACTTCGAGGGAAAGGCAGTACTGGTCGTGAACACAGCATCGTT GTGCGGACTAACGCCTCAGTTGAAAGAGCTGCAGATGGTGCACCGGCGCT TCCAGGCCCAGGGGTTTACCGTGCTCGGGGTCCCGTCCAACGATTTCGGG GGCCAGGAGACTAACGCCTCAGTTGAAAGAGCTGCAGATGGTGCACCGGC GCTTCCAGGCCCAGGGGTTTACCGTGCTCGGGGTCCCGTCCAACGATTTC GGGGGCCAGGAGCCATGGGAGGAGGAGAAGGTTCGGGGTTTCTATGAGAA GGAGCACGGCGTTACCTTCCCGCTCGCGTCCAAGCCATGGGAGGAGGAGA AGGTTCGGGGTTTCTATGAGAAGGAGCACGGCGTTACCTTCCCGCTCGCG TCCAAGACCAAGGTGTTACCGCCGGATGCACACGCCTTCTACACGGCGGT GGCTGAGGAGTTTGGGGAGGACGCATCCCCCAGACCAAGGTGTTACCGCC GGATGCACACGCCTTCTACACGGCGGTGGCTGAGGAGTTTGGGGAGGACG CATCCCCCAGGTGGAATTTTCACAAGTACCTGGTGGATGCCAAGGGAGAT CTTGTCGGGGTGGAATTTTCACAAGTACCTGGTGGATGCCAAGGGAGATC TTGTCGGGGTGTTTGACTCCCCCATGAGCCCTCTGGAGACGGAGCTCACG GACGCCATCGAGGAGGCCCTCCCCGCGCCCGCATAGGTGTTTGACTCCCC CATGAGCCCTCTGGAGACGGAGCTCACGGACGCCATCGAGGAGGCCCTCC CCGCGCCCGCATAG back to top
|