mRNA_S-ischiensis_contig8.19710.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: A0A835YSF8_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF8_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.520e-57 Identity = 88/112 (78.57%), Postives = 100/112 (89.29%), Query Frame = 3
Query: 261 KRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLSRQLNMSV 596
KR V+KW+ EED+LM LV E+GT+QWGLIG L+ RTGKQCRERWHNQLDP IKK+ WT+EEEE+LM AHS HGNRWAEIAK+LPGRTDN+IKNHWNSAKRRLSRQLNMS+
Sbjct: 28 KRVVRKWSPEEDQLMALLVKEHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPHIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLSRQLNMSM 139
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: A0A835YW24_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW24_9STRA) HSP 1 Score: 181 bits (459), Expect = 3.680e-55 Identity = 83/105 (79.05%), Postives = 95/105 (90.48%), Query Frame = 3
Query: 261 KRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLS 575
KRSV+KW+ EED+LM+ LV E+GT+QWGLIG L+ RTGKQCRERWHNQLDP IKK+ WT+EEEE+LM AHS HGNRWAEIAK+LPGRTDN+IKNHWNSAKRRLS
Sbjct: 3 KRSVRKWSPEEDQLMMLLVREHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPMIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLS 107
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: A0A6H5JK21_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK21_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.950e-53 Identity = 93/132 (70.45%), Postives = 110/132 (83.33%), Query Frame = 3
Query: 219 VDVGLVLDTLDHKRKRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNN----RTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLSRQLNMSVST 602
+D +L+ LD KRKR V+KW+ +ED MV+LV E G KQWGLIG +L++ RTGKQCRERWHNQLDP IKK+PWTK EE+ LM AHS HGN+WAEIAK+LPGRTDN+IKNHWNSAKRRLSRQLNMSV++
Sbjct: 6 IDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVNS 137
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: A0A7S2CJK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJK5_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.080e-50 Identity = 81/110 (73.64%), Postives = 93/110 (84.55%), Query Frame = 3
Query: 255 KRKRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLSRQL 584
K +R V+KWT EED LM+ LV E+GTK WG IG L RTGKQCRERWHNQLDP I+K+PWT EEEIL+ AHS +GNRWAEIAK+LPGRTDN++KNHWNSAKRRLSRQ+
Sbjct: 43 KPRRVVRKWTPEEDSLMMTLVQEHGTKHWGRIGSSLQGRTGKQCRERWHNQLDPAIRKDPWTGGEEEILLKAHSLYGNRWAEIAKLLPGRTDNAVKNHWNSAKRRLSRQV 152
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: A0A7S0SQE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQE8_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.300e-49 Identity = 81/112 (72.32%), Postives = 94/112 (83.93%), Query Frame = 3
Query: 246 LDHKRKRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLSRQ 581
L + +KR+V+KWT EED LM+ LV+E+GT+ WGLIG KLN RTGKQCRERWHNQLDP I K PWT+ EE +L+ AH+ GNRWAEIAK LPGRTDN+IKNHWNSAKRRL RQ
Sbjct: 10 LSNGQKRTVRKWTQEEDNLMMALVSEHGTRHWGLIGAKLNGRTGKQCRERWHNQLDPAINKTPWTEHEESLLLAAHNDLGNRWAEIAKRLPGRTDNAIKNHWNSAKRRLLRQ 121
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: I2CQ47_NANGC (Myb transcription factor (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ47_NANGC) HSP 1 Score: 160 bits (406), Expect = 1.500e-46 Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = 3
Query: 261 KRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLS 575
K+ V+KW+AEED MVRLV E GTKQWG IG +L R+GKQCRERWHNQLDP+IKKE W+ EEE +L H+ +GNRWAEIA+ LPGRTDN+IKNHWN+A+RR+S
Sbjct: 20 KKMVRKWSAEEDAEMVRLVKELGTKQWGQIGIQLGGRSGKQCRERWHNQLDPNIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIKNHWNNARRRMS 124
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: A0A024GD84_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GD84_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.520e-46 Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 3
Query: 255 KRKRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLSRQLNMSVS 599
K ++ V KWT EED +M++LV YGT+ W +IG KL R GKQCRERWHNQLDP I+K+PWT EEE IL AH +GN+WAEIAK LPGRTDN+IKNHWNS+KRRL R MS+S
Sbjct: 25 KDRKPVSKWTDEEDNMMIKLVERYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPSIRKDPWTDEEERILKEAHEKYGNKWAEIAKKLPGRTDNAIKNHWNSSKRRLKRSR-MSIS 138
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: A0A7R9U0E6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0E6_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.630e-46 Identity = 78/110 (70.91%), Postives = 95/110 (86.36%), Query Frame = 3
Query: 255 KRKRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLSRQL 584
++KR V+KWT EED+LM+ LV +GTK+WGLIG +L RTGKQCRERWHNQLDP I+K+PW+K+EE IL+ H GNRWAEIAK+LPGRTDN+IKNHWNSAKRRL+RQ+
Sbjct: 18 RKKRQVRKWTPEEDKLMMDLVNTFGTKRWGLIGGRLQGRTGKQCRERWHNQLDPSIRKDPWSKQEEAILIVVHQQVGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLTRQM 127
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: A0A8K1FIZ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIZ4_PYTOL) HSP 1 Score: 165 bits (417), Expect = 6.210e-46 Identity = 76/122 (62.30%), Postives = 94/122 (77.05%), Query Frame = 3
Query: 234 VLDTLDH-------KRKRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLSR 578
+LD DH K ++ V KWT +ED++M++LV +YGT+ W +IG KL R GKQCRERWHNQLDP I+K+PWT EEE IL +H +GN+WAEIAKMLPGRTDN+IKNHWNS+KRRL R
Sbjct: 13 LLDDEDHYRGSKKRKERKPVCKWTEKEDQMMIKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKDPWTDEEERILRESHELYGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 134
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Match: D0MS64_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MS64_PHYIT) HSP 1 Score: 163 bits (412), Expect = 2.090e-45 Identity = 76/114 (66.67%), Postives = 88/114 (77.19%), Query Frame = 3
Query: 237 LDTLDHKRKRSVKKWTAEEDELMVRLVAEYGTKQWGLIGPKLNNRTGKQCRERWHNQLDPDIKKEPWTKEEEEILMHAHSTHGNRWAEIAKMLPGRTDNSIKNHWNSAKRRLSR 578
LD K ++ V KWT +ED LM++LV +YGT+ W +IG KL R GKQCRERWHNQLDP I+KEPWT EEE IL H GN+WAEIAKMLPGRTDN+IKNHWNS+KRRL R
Sbjct: 21 LDPPTRKERKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPEEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 134 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19710.1 >prot_S-ischiensis_contig8.19710.1 ID=prot_S-ischiensis_contig8.19710.1|Name=mRNA_S-ischiensis_contig8.19710.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=176bp MSATQGVDVGLVLDTLDHKRKRSVKKWTAEEDELMVRLVAEYGTKQWGLIback to top mRNA from alignment at S-ischiensis_contig8:3282321..3283178+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19710.1 ID=mRNA_S-ischiensis_contig8.19710.1|Name=mRNA_S-ischiensis_contig8.19710.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=858bp|location=Sequence derived from alignment at S-ischiensis_contig8:3282321..3283178+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:3282321..3283178+ >mRNA_S-ischiensis_contig8.19710.1 ID=mRNA_S-ischiensis_contig8.19710.1|Name=mRNA_S-ischiensis_contig8.19710.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1056bp|location=Sequence derived from alignment at S-ischiensis_contig8:3282321..3283178+ (Schizocladia ischiensis KU_0333)back to top |