mRNA_S-ischiensis_contig8.19701.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19701.1
Unique NamemRNA_S-ischiensis_contig8.19701.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A6H5K6Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y8_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 5.710e-130
Identity = 194/263 (73.76%), Postives = 217/263 (82.51%), Query Frame = 1 
Query:   34 VWYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFYDRDYDTLLLVELATALAMHLAYKRYKAFKEQGQPFSGTDLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPRTQVEHGKRVG 822
            +WY+GA  LV GSLVNFAS GFAPQSLLASLGSVQFI NVVFGK IL E++TRRII GT TIILGN LT+CFSPHQD N+   +LKAFYD +Y+TLLL+ELA ALAMH AYK +K  KEQG+P   +DL MPLAYA+CSAIVGTQSV+ AKCLSELL++T RGENQLGS FTYLV  +W+ TT FWL RMNRALAMFHGLFIIPALQVFWTFFSV+ GG YFEEF+TL  L   GF  GV VVF GVYLLAPRTQ +HG+  G
Sbjct:  302 LWYLGAVLLVAGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREMVTRRIILGTATIILGNTLTLCFSPHQDDNFSTHELKAFYDAEYNTLLLLELAIALAMHAAYKSFKRSKEQGRPRRHSDLVMPLAYAICSAIVGTQSVVNAKCLSELLTLTFRGENQLGSIFTYLVFAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIDGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGRHAG 564
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BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: D7G9H4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H4_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 4.230e-126
Identity = 192/263 (73.00%), Postives = 217/263 (82.51%), Query Frame = 1 
Query:   34 VWYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFYDRDYDTLLLVELATALAMHLAYKRYKAFKEQGQPFSGTDLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPRTQVEHGKRVG 822
            +WY+GA  LV GSLVNFAS GFAPQSLLASLGSVQFI NVVFGK IL E++TRRII GT TIILGN LT+CFSPHQD N+   +LKAFYD +Y+TLLL+ELA ALAMH AYK +K  KEQG+P   +DL MPLAYA+CSAIVGTQSV+ AKCLSELL++T +GENQLGS FTYLV  +W+ TT FWL RMN+ALAMFHGLFIIPALQVFWTFFSV+ GG YFEEF+TL  L   GF  GV VVF GVYLLAPRTQ +HG+  G
Sbjct:  305 LWYLGAVLLVAGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREMVTRRIILGTATIILGNTLTLCFSPHQDDNFSTHELKAFYDAEYNTLLLLELAIALAMHAAYKSFKRSKEQGRPRRHSDLVMPLAYAICSAIVGTQSVVNAKCLSELLTLTFQGENQLGSIFTYLVFAIWLGTTIFWLVRMNQALAMFHGLFIIPALQVFWTFFSVIDGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGRHAG 567
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BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A7R9YAD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAD8_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.100e-66
Identity = 112/263 (42.59%), Postives = 164/263 (62.36%), Query Frame = 1 
Query:   34 VWYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFYDRDYDTLLLVELATALAMHLAYKRYKAFKEQGQPFSGT--DLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPRTQVEHGKR 816
            +WY+G   +V G ++ F S+GFAPQSLLA LGS+QF+ NV+ G+ +L E +TRR I  T+ ++LG+AL V F  H++ +Y +  L+  Y   Y   L++ L  A  +H  Y +Y  + ++G P +        PL+Y   SAI+GTQ  I AK  S ++  T+ G+NQL  P +++ I   ++ + FWL RMN AL MF GLFIIPALQV W F+ ++ GG+YF+EFN L+   I GF   + ++F GVYLL P  + E  +R
Sbjct:   56 IWYIGVFLMVFGGILVFGSLGFAPQSLLAPLGSIQFVSNVIMGRFLLKETVTRRTIIATVLLMLGSALAVVFGDHEEQSYTLSDLEGLYTVGYVIFLVLVLLLAALLHFVYVKYHKYAKEGGPIAPPYHKYVYPLSYCNTSAIIGTQGAIFAKAASHIVDETISGDNQLKFPLSWVFIFGAIAGSIFWLVRMNSALKMFAGLFIIPALQVCWIFWMIIAGGLYFQEFNGLAAWQICGFVVSILIIFTGVYLLVPVDEEEEMQR 318
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BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A7S1U9L0_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9L0_9STRA)

HSP 1 Score: 204 bits (518), Expect = 6.350e-60
Identity = 108/258 (41.86%), Postives = 159/258 (61.63%), Query Frame = 1 
Query:   37 WYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFY-DRDYDTLLLVELATALAMHLAYKRYKAFKEQG-QPFSGTDLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPRTQVE 804
            W++G    + GSL+ FAS GFAPQS+LA+L +VQFI N+ FGK +L E IT+R++ GT+ ++ G +L V FS H+ + Y    L++ Y +  Y   L     T +A  + +  Y A ++QG +     +L  P++Y   SA++GTQ ++ AKC+S LL +T  G+NQ    FTY  I VW+ +  +W+ RM+  L +F G FIIP LQV +T  ++V GG+YF+EF+   P  I  F AG  ++F GVYLLAP    E
Sbjct:   80 WFIGTSIFICGSLLLFASFGFAPQSVLAALEAVQFITNIFFGKFVLGEAITKRMVLGTVALVGGMSLVVAFSKHETSLYSSEDLQSLYGELAYIVFLAFAGVTLIASRVLFNVYGARRQQGLENLPYHNLVYPISYCYFSAMIGTQQLLMAKCISNLLRLTGDGDNQFTHWFTYFCIAVWLLSAIYWVYRMDLGLKLFKGPFIIPVLQVHFTLLAIVSGGIYFKEFDGQPPGHICAFVAGCVIIFGGVYLLAPAEVEE 337
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BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A2K1K606_PHYPA (Probable magnesium transporter n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K606_PHYPA)

HSP 1 Score: 203 bits (517), Expect = 4.950e-59
Identity = 114/255 (44.71%), Postives = 150/255 (58.82%), Query Frame = 1 
Query:   37 WYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFYDRD-YDTLLLVELATALAMHLAYKRYK--AFKEQGQPFSGTDLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPR 792
            W +G     LG+++NF S G+A QSLLA+LGSVQF+ NV F   +L+EI+TRRII  T+ I++GN   V F  HQ   Y  GQL A Y    Y T L + L    A H  Y+R +  A      P     + +P  YAV S  VG+ SV+ AK LS LL  TL G+NQL   FTY+V  ++V T +FW+ R+N  LAMF  + I+P LQ+ WTFFS+  G +YFEE+          FG GV  +F G+ LLAP+
Sbjct:   60 WRIGVIVFSLGNILNFISFGYAAQSLLAALGSVQFVSNVFFAYLMLNEIVTRRIILATVFIMVGNGFLVAFGNHQSVIYTHGQLLASYKGHIYLTYLFILLCIVAAHHSIYRRGRQLAASRGEDPVGVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGDNQLDGWFTYIVFFLFVGTASFWMARLNDGLAMFDAILIVPMLQIVWTFFSIFTGFIYFEEYRVFDHFRATMFGIGVLALFVGMSLLAPQ 314
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BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A7I4DFZ4_PHYPA (Probable magnesium transporter n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DFZ4_PHYPA)

HSP 1 Score: 196 bits (498), Expect = 1.230e-56
Identity = 108/255 (42.35%), Postives = 147/255 (57.65%), Query Frame = 1 
Query:   37 WYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFYD-RDYDTLLLVELATALAMHLAYKRYKAFK-EQGQ-PFSGTDLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPR 792
            W +G      G+++NF S G+A QSLLA+LGS+QF+ NV F   +L+E++TRRI+  T  I++GN   V F  HQ   Y   QL   Y  R Y T   + L      H  Y+R +     +G+ P S   + +P  YAV S  VG+ SV+ AK LS LL  TL GENQL   FTYLV  ++  T +FW+ R+N  LA+F  + I+P LQ+ WTFFS+  G +YFEE+          FG GV  +F G+ LLAP+
Sbjct:   58 WRIGVAIFSFGNILNFISFGYAAQSLLAALGSIQFVSNVFFAYLMLNEVVTRRIVLATSFIVVGNGFLVAFGNHQSVIYTSEQLLRNYGGRVYLTYCFILLCIVAVHHAIYRRGRQLTVSRGEDPGSVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGENQLDGLFTYLVFFLFAGTASFWMARLNDGLALFDAILIVPMLQIVWTFFSIFTGFIYFEEYRVFGRFRAAMFGVGVLALFVGMSLLAPQ 312
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BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A2R6W3B2_MARPO (Probable magnesium transporter n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W3B2_MARPO)

HSP 1 Score: 197 bits (501), Expect = 1.820e-56
Identity = 110/266 (41.35%), Postives = 156/266 (58.65%), Query Frame = 1 
Query:   37 WYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFY-DRDYDTLLLVELATALAMHLAYKRYKAF-KEQGQPFSGT--DLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPRTQVEHGKRVG 822
            W  G     LG+ +NF S GFA QSLLA+LGSVQF+ NV F   +L+E +T RI++ T  I++GN   V F  HQ + Y   +L A Y D  Y     + +   ++ H  YKR +     +G+   GT     +PL+YA+ S  +GT SV+ AK LS L+ +TL GE QL + FTYL+  +++ T +FW+ R+N  LAMF  + I+P LQ+ WTFFS+  G +YFEE+          F  G+F +F G+ LLAP+T   HG + G
Sbjct:   73 WRFGVIVFSLGNCLNFISFGFAAQSLLAALGSVQFVSNVGFAYLVLNETVTGRILFATAFIVVGNIFLVAFGNHQSSTYTNEELLANYKDPLYLGYCALLILIVISQHFVYKRGRHLVMTRGEEAVGTFWRTMVPLSYAIVSGAIGTHSVLFAKSLSILMRLTLSGETQLDAFFTYLIFFLFLGTASFWMARLNEGLAMFDAILIVPMLQIAWTFFSIFTGFIYFEEYQVFDGPRASMFALGMFALFLGMSLLAPQTPKGHGTKSG 338
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BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A7I4DHS0_PHYPA (Probable magnesium transporter n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DHS0_PHYPA)

HSP 1 Score: 196 bits (498), Expect = 3.410e-56
Identity = 108/255 (42.35%), Postives = 147/255 (57.65%), Query Frame = 1 
Query:   37 WYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFYD-RDYDTLLLVELATALAMHLAYKRYKAFK-EQGQ-PFSGTDLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPR 792
            W +G      G+++NF S G+A QSLLA+LGS+QF+ NV F   +L+E++TRRI+  T  I++GN   V F  HQ   Y   QL   Y  R Y T   + L      H  Y+R +     +G+ P S   + +P  YAV S  VG+ SV+ AK LS LL  TL GENQL   FTYLV  ++  T +FW+ R+N  LA+F  + I+P LQ+ WTFFS+  G +YFEE+          FG GV  +F G+ LLAP+
Sbjct:   58 WRIGVAIFSFGNILNFISFGYAAQSLLAALGSIQFVSNVFFAYLMLNEVVTRRIVLATSFIVVGNGFLVAFGNHQSVIYTSEQLLRNYGGRVYLTYCFILLCIVAVHHAIYRRGRQLTVSRGEDPGSVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGENQLDGLFTYLVFFLFAGTASFWMARLNDGLALFDAILIVPMLQIVWTFFSIFTGFIYFEEYRVFGRFRAAMFGVGVLALFVGMSLLAPQ 312
[Close]
BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A6U2SCF9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2SCF9_9STRA)

HSP 1 Score: 193 bits (490), Expect = 4.780e-54
Identity = 105/257 (40.86%), Postives = 156/257 (60.70%), Query Frame = 1 
Query:   34 VWYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFYDRD-YDTLLLVELATALAMHLAYKRYKAFKEQGQPFSGTDLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRG-ENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPRTQ 798
            +W VG    V GSL NFAS  F  QS+LASL S+QF+ N++FGK +L   +T R+  GT  I+ G  L+V FS     ++ +  + + Y    Y   ++  +A  + + +A+ R++    + +P   TD A+PL Y+V SA+ GTQSV+QAK L+ELL +  RG EN   S F Y  I++W+ST   WL R+N AL  F+ LFIIP LQ  + FF+++ GG++F+EF+T + +   GF  G  V+  G+ LL P+ Q
Sbjct:  127 IWLVGTLIFVSGSLFNFASYAFGAQSMLASLESIQFVTNLIFGKYMLGCTVTGRMALGTFLIVTGTVLSVQFSSKDRLDFTIDDIISLYQNPKYIAYMVFVVALLVILQIAFDRFELAVLKNRPMKYTDSAVPLIYSVWSALFGTQSVVQAKVLAELLEVQSRGKENIFQSWFLYFTILMWLSTVVVWLKRLNNALRKFNPLFIIPLLQCSFIFFAIISGGIFFKEFDTFNGVQWLGFWCGNMVMMSGLMLLTPKPQ 383
[Close]
BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Match: A0A250X4V1_9CHLO (Probable magnesium transporter n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X4V1_9CHLO)

HSP 1 Score: 194 bits (492), Expect = 2.470e-53
Identity = 110/260 (42.31%), Postives = 156/260 (60.00%), Query Frame = 1 
Query:   37 WYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICNVVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFYDRDYDTLLLVELATALAMHLAYKRY--KAFKEQGQPFSGTDLAMPLAYAVCSAIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTRMNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAGVFVVFWGVYLLAPRTQVEHG 810
            W VG    +LG++ NFAS GFA QSLLA+LGSVQF+ NVVF   +L E ITR ++  T  II G  + V F  H +A Y+V QL   Y +      L  +   +A   A   Y  K  K  G+  +     MP+AY+V +A++GTQSV+ +K LS LL MT++G+NQ  + +T++ ++ +  +  FW+TR+N+ L MF  + I+P LQ+ WT FS+V G +YFEE+ + + L    F  GV VVF GVYLL    Q + G
Sbjct:   51 WQVGLVVFILGNIANFASFGFAAQSLLAALGSVQFVSNVVFASTVLKEKITRMVLIATACIIGGCLILVIFGDHSNATYEVEQLIDLYRQPVYISYLCVMGAFVAGGYALYVYGRKVEKIPGREQALVVQIMPVAYSVFAALLGTQSVLFSKSLSVLLRMTVQGDNQFNNWYTWVTLICFFISAGFWVTRLNKGLRMFPAMIIVPLLQICWTLFSIVSGLLYFEEYRSFNTLRACMFALGVTVVFVGVYLLTRSGQKKKG 310
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6Y8_9PHAE5.710e-13073.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9H4_ECTSI4.230e-12673.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YAD8_9STRA1.100e-6642.59Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1U9L0_9STRA6.350e-6041.86Hypothetical protein n=6 Tax=Phaeomonas parva TaxI... [more]
A0A2K1K606_PHYPA4.950e-5944.71Probable magnesium transporter n=2 Tax=Physcomitri... [more]
A0A7I4DFZ4_PHYPA1.230e-5642.35Probable magnesium transporter n=1 Tax=Physcomitri... [more]
A0A2R6W3B2_MARPO1.820e-5641.35Probable magnesium transporter n=2 Tax=Marchantia ... [more]
A0A7I4DHS0_PHYPA3.410e-5642.35Probable magnesium transporter n=4 Tax=Physcomitri... [more]
A0A6U2SCF9_9STRA4.780e-5440.86Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A250X4V1_9CHLO2.470e-5342.31Probable magnesium transporter n=1 Tax=Chlamydomon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3246601..3252375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.0
Seed ortholog evalue1.9e-105
Seed eggNOG ortholog2880.D7G9H4
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0012505,GO:0015693,GO:0016020,GO:0030001,GO:0031410,GO:0031982,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0070838,GO:0071944,GO:0072511,GO:0097708
EggNOG free text desc.magnesium ion transmembrane transporter activity
EggNOG OGsKOG2922@1,KOG2922@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons7
Model size880
Cds size876
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817298.202032-CDS-S-ischiensis_contig8:3246602..32467191622817298.202032-CDS-S-ischiensis_contig8:3246602..3246719Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3246603..3246719 -
1695741006.2433422-CDS-S-ischiensis_contig8:3246602..32467191695741006.2433422-CDS-S-ischiensis_contig8:3246602..3246719Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3246603..3246719 -
1622817298.2180843-CDS-S-ischiensis_contig8:3247237..32473421622817298.2180843-CDS-S-ischiensis_contig8:3247237..3247342Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3247238..3247342 -
1695741006.255248-CDS-S-ischiensis_contig8:3247237..32473421695741006.255248-CDS-S-ischiensis_contig8:3247237..3247342Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3247238..3247342 -
1622817298.230523-CDS-S-ischiensis_contig8:3248156..32482761622817298.230523-CDS-S-ischiensis_contig8:3248156..3248276Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3248157..3248276 -
1695741006.2693467-CDS-S-ischiensis_contig8:3248156..32482761695741006.2693467-CDS-S-ischiensis_contig8:3248156..3248276Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3248157..3248276 -
1622817298.2461808-CDS-S-ischiensis_contig8:3249408..32495711622817298.2461808-CDS-S-ischiensis_contig8:3249408..3249571Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3249409..3249571 -
1695741006.2788267-CDS-S-ischiensis_contig8:3249408..32495711695741006.2788267-CDS-S-ischiensis_contig8:3249408..3249571Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3249409..3249571 -
1622817298.2579954-CDS-S-ischiensis_contig8:3250611..32507211622817298.2579954-CDS-S-ischiensis_contig8:3250611..3250721Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3250612..3250721 -
1695741006.287737-CDS-S-ischiensis_contig8:3250611..32507211695741006.287737-CDS-S-ischiensis_contig8:3250611..3250721Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3250612..3250721 -
1622817298.2690077-CDS-S-ischiensis_contig8:3251288..32513841622817298.2690077-CDS-S-ischiensis_contig8:3251288..3251384Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3251289..3251384 -
1695741006.2978103-CDS-S-ischiensis_contig8:3251288..32513841695741006.2978103-CDS-S-ischiensis_contig8:3251288..3251384Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3251289..3251384 -
1622817298.2804227-CDS-S-ischiensis_contig8:3252210..32523751622817298.2804227-CDS-S-ischiensis_contig8:3252210..3252375Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3252211..3252375 -
1695741006.3099859-CDS-S-ischiensis_contig8:3252210..32523751695741006.3099859-CDS-S-ischiensis_contig8:3252210..3252375Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3252211..3252375 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19701.1prot_S-ischiensis_contig8.19701.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 3246603..3252375 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19701.1

>prot_S-ischiensis_contig8.19701.1 ID=prot_S-ischiensis_contig8.19701.1|Name=mRNA_S-ischiensis_contig8.19701.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=292bp
RLLLLRRRSKTVWYVGAGSLVLGSLVNFASMGFAPQSLLASLGSVQFICN
VVFGKAILHEIITRRIIWGTMTIILGNALTVCFSPHQDANYDVGQLKAFY
DRDYDTLLLVELATALAMHLAYKRYKAFKEQGQPFSGTDLAMPLAYAVCS
AIVGTQSVIQAKCLSELLSMTLRGENQLGSPFTYLVIVVWVSTTAFWLTR
MNRALAMFHGLFIIPALQVFWTFFSVVGGGVYFEEFNTLSPLAIFGFGAG
VFVVFWGVYLLAPRTQVEHGKRVGSYSTAGGSFSGGGRRLLG
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mRNA from alignment at S-ischiensis_contig8:3246601..3252375-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19701.1 ID=mRNA_S-ischiensis_contig8.19701.1|Name=mRNA_S-ischiensis_contig8.19701.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5775bp|location=Sequence derived from alignment at S-ischiensis_contig8:3246601..3252375- (Schizocladia ischiensis KU_0333)
CGGCTGCTGCTGCTGCGGCGGAGGAGCAAGACGGTGTGGTACGTGGGGGC
GGGGTCGCTGGTGCTGGGGAGCCTGGTGAACTTTGCGTCCATGGGTTTTG
CGCCACAGAGCCTGCTGGCGAGCCTGGGCTCGGTGCAGTTCATCTGCAAC
GTGGTGTTTGGGAAGGCGAGTAGTGTATTTTCTATTCGCTCACGTCTGCT
CTGCTCTGTCTCTGCTCGCCGTGCTGTATTTGAAACGTGGGAAGGAAGGT
CAAACTTACCAACGTTGCGGTGGTCCCGGCCGCCTGTTAACTCTTTGGGG
ACTACAACAAATTGTAGGGTGGGCAGGGTATTAACTGGCGGGACTCTCGT
CCCGCACCCAACTCCCATGGTATGGTGTCCCGTCGTCCTCAAAGGGCTGG
TCTCGTTGAGGAGCTAATTGGATAACGGTGGGACCCTAATCTGCTTTGCA
GGAGTGTTTTCAGTAGCAGGGTGGGGTAAGTTACGCCTCCCGTCGCCCTC
TCCTAGGATATGCAGTAAAGCAAGAGTTGGGACCCCCTCTCGGGGGGATA
CGCCGACAATCATGTTGCCGTGTGTGTGTGTGTGTGTCGCTCGGAACCGT
GAGGGATCAGCGGACGAGTACCACGGGCTGCTGAGGGTTTATGGTGAAGT
CCTCGTGTCTCCAGCCAGCCTGCCCGCCTGCCCGGCCGTCCGCCTGGCCC
CTTCCTCGTGTGGTCCTCACTACAGTTGTGTGCCGGTCGCCCACTGTGAC
CTCCCTGGTGCTGTGATGGAATCAACCTATTCATCGACAGTACTGATCTA
TACATCTATTAATAGCCGATATTCGATAGTTTGACCCGCACAAAAAATCC
CAAGTAGTTAGTAACGCCACACACAAAATCAGTCGAGCCCGATATCTGTC
TACTGATCGATATTCCATCACTGCCCGCGGTGTGTGTGTGTGTGCGCGCG
CGCGCACGCGCGCGTGCGTGCGCATGTGCCGGTTGGCGCAGGCGATCCTC
CACGAGATCATCACCCGGCGCATAATCTGGGGCACCATGACCATCATCCT
GGGGAACGCCCTCACCGTCTGCTTCAGCCCGCACCAGGTACTTCGAAGTA
CTAGGTCGTCCCGCCTTTCCTTTTGCCTGCTCCTCCTCCCCCAGGCCACA
GTTGCCAATGTGGGCCACCACCACCAGTGCCGCTGCGGCCCTTGCCACCA
CCACCACCGCCGCTGCGGCAACCCTCACCGCCGCCCCGGCCTCTGCCATG
AGAACACTCAATCTCACACACGTGTGATTGTACCTCGTTGCAATTTGTAT
GAATCACCACCTTTGCCACCACTATGATCACGACAACCGCTACCACCGTC
ACCATCACCTCCTTCACCACCACCACCACCACCGCCGCCGCCGCCACCAC
CAACACCACCACCACCACCACCACCACCACTGCCACCACCACCACCGCCG
CCACCAACACCACCACCACCAGCACCACCCCCACCAGCCCCCCCCCCCCC
CACCGCCGCCCCCTCACCACCACCACCACCACCACCACCTTCGCCACTAC
AGCCGCAGTCACAACCCTGCCTCGGAGCCGGATCCCCTCGCGGTCATCCA
AAACGTAACCCCAACCCCAAGCCCCCCCCCCGGCCCCCGGCCCCCGGCCC
CCAGGACGCCAATTACGACGTGGGGCAGCTCAAGGCCTTCTATGACAGGG
ATTACGACACCCTCTTGCTCGTGGAGCTGGCCACCGCCCTCGCCATGCAC
CTCGCCTACAAGAGGTAAGCATAGTACTGCACTCGTACAGTACAGCAGCC
TAGAAGAGGTAAGCAATTGTAGGTACTATACTCGTGCAGTGCAGCAGCGC
TGTGACTGCGGTACAGCAGTTGCCACCGGACATGGGGGGTGGGGGGGCAA
AAATAAGCTCTAGAGCTCTATTGTACGATATGTGCCGCGGAGGAATTGTG
GTACTCGAGTACAAGTAATTGCCTGCTTGTGCATGTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCCCCTCAGTTGTACACGCCGCACGCCGTCGAAT
TATTCCAACATCACGACGTGGCTGTTGGTGTTCGTCTTCATGCATTCCAC
CAAGCTTGAACTGCCACGGGAGCAAAAAAGGCAACGAACGAACCGCCGCA
CCCCCGGGGGACCCTCTATCCAAGCAAGCACGTGTGTATGACGCCCGTAG
GCATCCACGGCCAGGGTTGGCACTTCGAGGTTAAATAGGGGGTCCTAATT
AGCCTTAATTGGGGACCAATAGCCTTCGTTTTAGGTCTAATTACCCCTAA
TTACCTCTAGTTAAGGGCCTAAAGGGGCACCACTTAGGGGTTATACGCCA
ACCCAGTGGACCACGACCGTCTACTGTACTCTATCTCCTCCAGGAACAAG
GCCTTCAAGGAGCAGGGGCTACCCTTCTCGGGCACGGACCTGGACATGCC
TACCTGTCATTTGCCTTGAGTAGGGCCTAATTAGCCCGCCTTTTAGGTCT
AATTACCTCTAATTTTGCCTGTCTCCTCCAGGTACAAGGCCTTCAAGGAG
CAGGGGCAGCCCTTGTCGGGCACGGACCTGGCCATGCCTACTGGTAAATT
GCCTTAAAGGGCCTAATTAGCCTTTCTTCTAGGTCTAATTACCCATTTTT
GCCTCTAATCAGGTACAAGGCCTTTATGGAGCAGGGGCAGCCCTTCTCGG
CCACGGACCTGGCCATGCCTCTGATAGCTTGCCTTAATTAGGGCCTACAT
AGTTAGCCTTCCTTTTAGGTCTAACTACTGGTACCCCTAATTACCCCTAA
TCAGGTACAAGGCCTTCAAGGAGCAGGGGCAGCCCTTCTCGGGCACGGAC
CTGGCCATGCCCCTGGCGTACGCCGTGTGCTCGGCCATTGTGGGCACGCA
GAGCGTCATACAGGCCAAGTGCCTGTCGGAGCTGCTGTCCATGACCCTCC
GCGGGGAGAACCAGCTGGTGTGTGTTGTGCTTGTTTTTAACCCTTTGAGA
ACTAAATCCCTATAGTTCCGTGTACACTTGGGGCAGAAGGGTTGTACCTT
CATCGCCTCTGTTTGGTGACTCGGCGTTTTTAGGTGCCTGTCGGAGCTGC
TGTCCATGACCCTCCGCGGGGAAAACCAGCTGGTGCGTCGGGTGTGCTTG
TTTTTGTTTACCCTTTGAGCAACAAATCCCTAGAGCTCTATAGTTCTGTG
TTGGGACAGAAGGGTTAGCATTCATTGCCTCTGTTTGGTGTGAGAGCTGC
TGTCCATGACCCTCCGCGGGGAGAACCAGCTGGTGCATGCGTGTGCTCGT
TTTAAACCCTTTGACCATTAGCTCTTTGAGTGTGTACACGTGCACTACAT
AGGTCCCTGTAGTTCCATGTAAACCTGGGTTATAAGCAGAAGGGTTAACC
TTCCTTGCCTCTGCTTGGTGTGAGACTCGGCGTTTTTAGCCCTTTGACCC
CCCGGGGAGGGTGTACGGATGTGTGTATCACTCGACTTAGTATACTAGTA
GTATAGTCGGGATTTTATCACTCGACGTAATTAGTACTTCGAAGTACAGC
ATAGTCGAGAGTCCACGGCAAAATAGATATTCCTGTCGGAGGGCAAACCC
CGGGGAAGTTGCGACTTGGGGCTGTCGGCAATGCACGCAAGGTTATGTCG
CATGACAATCATTACAGGCAATGGGTAGAGTACACACCTAATATATACTT
GCGGCAGCGGAGTGCTTCGTATACCTCTGCCGCTGCTACTATTATTACAT
GCTTGGAACTACTTCCTATGTACTGTTGCGCTGCAGTAGAGTAAACCTCG
TGACACCACTAGCTACTATAACGCTCCTGCTCCTGCTGCCACCTCTGTGG
CTTCCGCCGCCTCGTCTGCTGCTGCTGCTCGTGCTACTGCCGCTGCCGCC
GCCACTGCCGCCGCCGCTGCCCCCGTCACCGCTGCTGCCGCCGCCGCCAC
TGCTGCCGCTGCTGCTGCTGCCGCTGCTGCCCCCGTCGTCGCCGCCGCCG
CCGCCGCTGCCGCCGCCGCTGCTGCCGCTGCTGCCGCTGCCACCGCTGCC
TACTCCCACCTCCTTGCCCGGCGCTCTCCCTCCTCTCTCCTCGGCGCAGG
GCTCCCCCTTCACGTACCTGGTGATTGTCGTGTGGGTGTCCACCACGGCC
TTCTGGCTGACCCGCATGAACAGGGCCCTGGCCATGTTCCACGGGCTATT
CATCATACCCGCCCTGCAGGTGAACAGCCAGCTGCCGGTGCTACAGTACT
TTGTACTTAATACCGCGGTCCCTCCTTGTTCTTAGTTCCTTGATATGATA
GTCACTAGTACTTCGAAGTATAAGAACAGTGAATTTTAAATGGGACAACT
ACTAGTAGAATCTCACACACGTGCCATTGTTACCTCATTACAATTTTGGC
ATGAAGATAAACAAGCGAGTGGGAAAGAAGAGGTAATCCTGCTTGCGCGA
GTCCAGGGCCCCCCATCCCCGGAAGCCTGTCTTTTTGCCCGCCTTCACTC
ACAGGGCAGATAGAGCAGAAAATCAAGAAAAACAAGGTTACAATTTATGT
GAATCACTGTGGTCCCGTGTTCCAACTGGTTGTCGCAGGCTTGAGGTTCC
CCCCCCCCCCTGGAGGGCATGTGCTGTACCTACAGAGTACCCGTGTAAAG
TACAGTGGCAATACGGTTGCTTCCACTACAAGTACTCCGGTGCCCGTGCT
GCACAGTACTTAGCGAGGTACACGTACAGTACAATGACCAAAGTGCTGCA
GTGGCATTGCTTCTGCGTAGCGCAGCACCCCTGCTGTACAGTACTTGGCG
CGCACAGCACAGTTGCCACTGTGGTGTAGAAGTACTACTGTACTCGTCCA
AGTACAGTCCTGTTGCAGTGCAGCGGCCCCCCTTCTCCTCTCCTCATCCT
CATCCCCCCACACCATACACCCCTCCATCTCCACTCCTCCTCCCCCCCAC
TGTCCACCCCCCACCCCCACCCTCCCCCTCCCCCGCCCGCTCCCCTACCC
CCGTGGACCTGTCGCCCCAAACGCCCCTCCCAGGTGTTCTGGACCTTCTT
CTCGGTGGTGGGGGGAGGTGTTTACTTTGAGGAGTTCAACACCCTGTCCC
CCCTTGCCATCTTCGGCTTCGGGGCAGGGGTATTTGTGGTGAGCCGACCC
ACTGCGGCCGCCGCTACCGCCGCCGCCGCCGCCACCACTGCTCTATCGGA
GTCCCTGCTTTTCCCGTCCATTACGGCTGCCCGTTTTACGGCCAGTTTGA
TACCTGACAAAGGTTTTTGGGGATGCAAGAATGTCGTGCGAGGCGACGTG
ATGTGATGTGTTGTCATGTGTGACGTCAAACTATAGCAAAGGAATTCGTC
ATGTGATGTGACGCGATTTGCATTCTTAGCTACAGTAGCATTGGAAGTCG
TTTTCCACCACCGTTGACGCCTTAAAGTGACGTGGCCTGCGCCTGTGTCG
TTGTTATCTACTTTGTAGTACTCAACTAGCTTGCAGTGCGCAAGGTCATT
GTATGTCCCAAGACAAGCCGACAAGCACATAGAAGTACTATTTAACCCTT
TCACCCCCGCTAAATTGGACTTGCACACTAAACCCCAATGATTGCGCGGA
CCCCAGGGGTAGAAGGGTTGACGTTTTGAATCGACCGCACGTGACACTGC
CCGCAGGTCTTCTGGGGCGTGTACCTCCTCGCCCCCCGCACCCAGGTGGA
GCACGGGAAGCGCGTCGGCAGCTATAGCACGGCGGGGGGCTCATTCTCCG
GGGGGGGGAGGCGTTTGCTCGGGCC
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:3246601..3252375-

>mRNA_S-ischiensis_contig8.19701.1 ID=mRNA_S-ischiensis_contig8.19701.1|Name=mRNA_S-ischiensis_contig8.19701.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1752bp|location=Sequence derived from alignment at S-ischiensis_contig8:3246601..3252375- (Schizocladia ischiensis KU_0333)
CGGCTGCTGCTGCTGCGGCGGAGGAGCAAGACGGTGTGGTACGTGGGGGC
GGGGTCGCTGGTGCTGGGGAGCCTGGTGAACTTTGCGTCCATGGGTTTTG
CGCCACAGAGCCTGCTGGCGAGCCTGGGCTCGGTGCAGTTCATCTGCAAC
GTGGTGTTTGGGAAGCGGCTGCTGCTGCTGCGGCGGAGGAGCAAGACGGT
GTGGTACGTGGGGGCGGGGTCGCTGGTGCTGGGGAGCCTGGTGAACTTTG
CGTCCATGGGTTTTGCGCCACAGAGCCTGCTGGCGAGCCTGGGCTCGGTG
CAGTTCATCTGCAACGTGGTGTTTGGGAAGGCGATCCTCCACGAGATCAT
CACCCGGCGCATAATCTGGGGCACCATGACCATCATCCTGGGGAACGCCC
TCACCGTCTGCTTCAGCCCGCACCAGGCGATCCTCCACGAGATCATCACC
CGGCGCATAATCTGGGGCACCATGACCATCATCCTGGGGAACGCCCTCAC
CGTCTGCTTCAGCCCGCACCAGGACGCCAATTACGACGTGGGGCAGCTCA
AGGCCTTCTATGACAGGGATTACGACACCCTCTTGCTCGTGGAGCTGGCC
ACCGCCCTCGCCATGCACCTCGCCTACAAGAGGACGCCAATTACGACGTG
GGGCAGCTCAAGGCCTTCTATGACAGGGATTACGACACCCTCTTGCTCGT
GGAGCTGGCCACCGCCCTCGCCATGCACCTCGCCTACAAGAGGTACAAGG
CCTTCAAGGAGCAGGGGCAGCCCTTCTCGGGCACGGACCTGGCCATGCCC
CTGGCGTACGCCGTGTGCTCGGCCATTGTGGGCACGCAGAGCGTCATACA
GGCCAAGTGCCTGTCGGAGCTGCTGTCCATGACCCTCCGCGGGGAGAACC
AGCTGGTACAAGGCCTTCAAGGAGCAGGGGCAGCCCTTCTCGGGCACGGA
CCTGGCCATGCCCCTGGCGTACGCCGTGTGCTCGGCCATTGTGGGCACGC
AGAGCGTCATACAGGCCAAGTGCCTGTCGGAGCTGCTGTCCATGACCCTC
CGCGGGGAGAACCAGCTGGGCTCCCCCTTCACGTACCTGGTGATTGTCGT
GTGGGTGTCCACCACGGCCTTCTGGCTGACCCGCATGAACAGGGCCCTGG
CCATGTTCCACGGGCTATTCATCATACCCGCCCTGCAGGGCTCCCCCTTC
ACGTACCTGGTGATTGTCGTGTGGGTGTCCACCACGGCCTTCTGGCTGAC
CCGCATGAACAGGGCCCTGGCCATGTTCCACGGGCTATTCATCATACCCG
CCCTGCAGGTGTTCTGGACCTTCTTCTCGGTGGTGGGGGGAGGTGTTTAC
TTTGAGGAGTTCAACACCCTGTCCCCCCTTGCCATCTTCGGCTTCGGGGC
AGGGGTATTTGTGGTGTTCTGGACCTTCTTCTCGGTGGTGGGGGGAGGTG
TTTACTTTGAGGAGTTCAACACCCTGTCCCCCCTTGCCATCTTCGGCTTC
GGGGCAGGGGTATTTGTGGTCTTCTGGGGCGTGTACCTCCTCGCCCCCCG
CACCCAGGTGGAGCACGGGAAGCGCGTCGGCAGCTATAGCACGGCGGGGG
GCTCATTCTCCGGGGGGGGGAGGCGTTTGCTCGGGGTCTTCTGGGGCGTG
TACCTCCTCGCCCCCCGCACCCAGGTGGAGCACGGGAAGCGCGTCGGCAG
CTATAGCACGGCGGGGGGCTCATTCTCCGGGGGGGGGAGGCGTTTGCTCG
GG
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