mRNA_S-ischiensis_contig8.19606.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19606.1
Unique NamemRNA_S-ischiensis_contig8.19606.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: D8LEZ0_ECTSI (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ0_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 2.270e-116
Identity = 187/337 (55.49%), Postives = 238/337 (70.62%), Query Frame = 2
Query:   32 MGLHEAFVLLGYLAVAFRKVLTVAWIRLNKFVSNSDSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVKLNDPRAARS--RAFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKLGAGVPPRGGGGAAEGAGEEQSKGPQGPAPVSGVGASGANKKKKKAE 1036
            M   E ++L  YL VA R+ LTV WIR+NKF+   D  IRP  DF HK+V+IGDGFAEGVGDWVVMGG +GVTR L+K  G ++K+RT W +INRGR GS+S+DW+P D    Y R+ V+S+AC DA+ F+V LGT D+V D VGMP++AM+KTA D F EGE+C+T++NLRE+CD LR  GK V +CNVMTSGAG+ RR G AKR+NRQ+ LY K +A  +         G +PV +VK+N+PRAAR   RAFDGLHLN+ GYR+FA A ++V+GPMMVAVEW +WK+KL AG+   G GGAA              AP+SG G    +K  KKA+
Sbjct:    1 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRK-VQSEACRDAEIFVVALGTMDVVNDCVGMPVSAMRKTALDTFEEGEICDTVKNLREICDALRAEGKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGKATATATAKGETAPKGG-QPVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLT-NGAGGAAV-------------APISGEGFEPKSKSNKKAD 321          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: T0QG23_SAPDV (SGNH_hydro domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG23_SAPDV)

HSP 1 Score: 145 bits (367), Expect = 6.590e-36
Identity = 97/280 (34.64%), Postives = 138/280 (49.29%), Query Frame = 2
Query:   65 YLAVAFRKVLTVAWIRLNKFVSNSDSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVKLNDPRAAR--SRAFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            YL V  R      W+RL +++      I P  ++ HK+V+IGDGFA G GD++      G+ ++L   + +E KIR  W+VINRG   + S+ W P  + K YF+ +   K   DAD  LVV+G+ D  R     PI            E E+  TLRN++ +CD L ++GK VA+  +  S           K +N + T   K      D         L  +    L  P   R  ++AFDG+H NS+GY+  AK A DV+ P+  AVEW  WK KL
Sbjct:    7 YLYVIVRSYCAWLWLRLCRWIQQPPRAILPTSEYRHKIVIIGDGFAAGYGDYINFDSPGGLAKYLHAAMAQEAKIRHNWQVINRGIVDTDSSQWTPMADTK-YFQTVFSKKEYRDADIVLVVVGSMDAQRSP---PI------------EPEV--TLRNIKSICDALTKKGKRVAVGTLCHSDI---------KAINVKHTATNKLLR---DFCVDTQHDELPVMCAPDLAIPMVRRPEAKAFDGIHFNSSGYKQIAKDAMDVIQPLATAVEWTTWKKKL 256          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: A0A2D4BF39_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF39_PYTIN)

HSP 1 Score: 145 bits (367), Expect = 1.190e-35
Identity = 99/290 (34.14%), Postives = 151/290 (52.07%), Query Frame = 2
Query:   77 AFRKVLTVAWIRLNKFVSNS--DSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTD----------IVRDTVGMPITAMKKT-AQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVKLNDPRAARSR---AFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            + R  LT+ W+++ ++V ++  D  ++P   F+HK+VVIGD FA GVGD++V+GG +G+ +HL   + + DK+R RW V+NRG  GS + DW+     K Y   I+ SKA  DA+  +VVLG+ +          + R  +   I  M +  +Q     G + +   NL  +CD LR++GKHV L  +  S + +G+   +   +N  +  +   S +G D           PV L    D  A R     AFD  HL S GY+  A+   D L P+M  VEW  WK +L
Sbjct:    8 SIRLYLTLLWLKICRWVVHALYDRSLKPTDQFFHKIVVIGDDFAAGVGDYLVLGGNAGLAQHLPHAIAQSDKVRHRWAVVNRGVVGSTTGDWLLNAPTK-YMDDILSSKATRDAEVVIVVLGSQEYRCVPVRLHTLPRSWITDEIVGMDRNRSQPSCQVGVMHK---NLVAICDTLRKKGKHVCLATI-ASPSPLGQDEKIP--LNAMLEEFCA-STKGDD----------TPVVLGPRLDTYAFRRESLLAFDSYHLCSNGYKVLARNTADFLVPIMTGVEWKTWKKQL 279          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: W4FUK0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.010e-35
Identity = 92/285 (32.28%), Postives = 146/285 (51.23%), Query Frame = 2
Query:   68 LAVAFRKVLTVAWIRLNKFVSNSDSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHV---ALCN--VMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVK-LNDPRAARS--RAFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            L VA R  +   W+R  ++ +     +    ++YHK+V+IGDGFA G GDW+ M    G++ ++   + +EDKIR +W+VINRG   + S+ W P    K YF+ ++ +    DAD  LVV+G+ D  R T  +                   +TLRN++ +CD LR++GK V   +LC+  V+T   G        + +N+ +  +   +A  +D           PV +   L+ P   RS  +AFDG H N+  Y+  A+ +  VL P++ AVEW  WK +L
Sbjct:    4 LYVAVRTFIAWLWLRFCRWCAQPLRLVLKSNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTK-YFQSVMSTPQLRDADVVLVVVGSMDARRKTPSISPD----------------QTLRNIQAICDALRKKGKRVCVGSLCHSDVVTECDGH-------RSINQALVDFCASTA--TDAF---------PVKITPDLSTPVVRRSDAKAFDGFHFNAKAYQQIARDSMMVLTPLLTAVEWSTWKKQL 253          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: A0A485L2D1_9STRA (Aste57867_14724 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.340e-35
Identity = 90/281 (32.03%), Postives = 133/281 (47.33%), Query Frame = 2
Query:   65 YLAVAFRKVLTVAWIRLNKFVSNSDSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHV---ALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVKLNDPRAARSRAFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            Y+ V  R      W+R  ++V+     +    +F HK+V+IGDGFA G GDWV M    G+ +++ K +  E KIR +W+VINRG   S SADW P  + K YF+ +  ++   DA+  LV++G+ DI R                 +      ETL+N++ +CD L ++GK V   +LC++             A R+  +  L         +           P+        R A S+AFDG H NS  Y+  A+    VL P + AVEW  WK KL
Sbjct:    8 YIYVTVRTFFAWLWLRYCRWVAQPIRLVPRSNEFVHKIVIIGDGFAAGFGDWVTMDSAGGLAQYIAKEIVNEPKIRHKWKVINRGILNSDSADWHPTSQTK-YFQDVFSTRQLRDAEVVLVIVGSIDIRR-----------------YPRIPAAETLKNIQSICDALTKKGKRVCVGSLCHIDIEAQNE------AHRLENKAILDLCTDTSADELPIKMAPDLSTPIV-------RRADSKAFDGFHFNSKAYQQIARDTMTVLTPTLTAVEWTTWKKKL 257          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: A0A6G0XR96_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR96_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.040e-34
Identity = 92/282 (32.62%), Postives = 137/282 (48.58%), Query Frame = 2
Query:   65 YLAVAFRKVLTVAWIRLNKFVSNSDSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHL-QKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVAL---VKLNDPRAARSRAFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            Y+ VA R      W+RL ++ +     I P  +F HK+V+IGDGFA G GDWV M    G+ R++  ++  EE K+R +W+VINRG   + S+ W P    K YF+         DAD  LV++G+ D  R     P                  +T+ N++ +CD LR++GK V +  +  S      +  + +  N+Q+  Y   ++ G D           PV +   + L   R   ++AFDG H NS  Y+  A  A  VL PM+ AVEW  WK +L
Sbjct:    7 YIYVAIRTFFAWIWLRLCRWCAQPLRLILPSNEFRHKIVIIGDGFAAGFGDWVTMDSPGGLARYIANEIAQEESKVRHKWQVINRGILDTDSSQWHPTASTK-YFQDTFSKHQLRDADIVLVIVGSMDSKRSPPIPP-----------------SQTVTNIQSICDALRKKGKRVCIGTLCHSDVEA--QNEIHRATNKQLLEYCNETS-GDD----------LPVKMTPDLSLPIVRRPDAKAFDGFHFNSKAYQQIAHEAMTVLTPMLTAVEWITWKKQL 257          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: A0A0W8C468_PHYNI (SGNH_hydro domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C468_PHYNI)

HSP 1 Score: 137 bits (344), Expect = 1.010e-32
Identity = 89/285 (31.23%), Postives = 138/285 (48.42%), Query Frame = 2
Query:   74 VAFRKVLTVAWIRLNKFVSNS--DSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSG-VTRHLQKLVGEEDK----IRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVKLNDPRAARSRA---FDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            VA R  L + W  +  F++ +     ++P   F+HK+V+IGD FA G+GD++ +GG  G + ++L+K+V  +DK    +R  W +IN G  GS +ADW+     K YF+ +  S   +DA   +++LG+T+I              TA+ +          RNL E+CD LR++GK V L  V++           +  +N  +  + K ++               PV L    D  A R  +   +D  H NS  YR  A+   D L PMM AVEW  WK +L
Sbjct:    3 VALRAFLALVWWHICHFLAYNLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYITIGGAGGGIAQYLKKIVAYDDKASGAVRHNWAIINAGVPGSTTADWLMSSPKK-YFKNVFTSSVMSDASIVIIILGSTEIRNSG----------TAEHEIK--------RNLMEICDTLRKKGKQVCLATVVSPEPTASEMDSASSTLNTALEQFCKSTSTEE-----------APVILGPRLDTYAFRRESALCYDKYHFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQL 257          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: A0A1V9ZUG2_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUG2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.560e-32
Identity = 92/283 (32.51%), Postives = 131/283 (46.29%), Query Frame = 2
Query:   56 LLGYLAVAFRKVLTVAWIRLNKFVSNSDSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVKLNDPRAAR--SRAFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            +L Y+ V  R  L   W+RL ++V      I P  ++ HK+V+IGDGFA G GD++      G+ ++L+  + ++ KIR  W+V+N G   + S+ W P    K YF  I       DAD  LV++G+ D  R     PI                 ETLRNL+ + D L ++GK VAL  +                +  Q  ++   S    D         L  V    L  P   R  ++AFDG H NS+ Y+  A+ A DV+ PM  AVEW  WK KL
Sbjct:    4 ILLYIYVTVRSYLAWFWLRLCRWVQQPARAILPTSEYRHKIVIIGDGFAAGYGDYITFDSPGGLAKYLRAAMSQDAKIRHNWQVLNCGIVDTDSSQWTPMASTK-YFHDIFSKAEYKDADIVLVMVGSMDATRTP---PIAPE--------------ETLRNLKSIADALTKKGKRVALAPLCHCD------------LAAQNDVHVAASKLIRDFCTDTQHDDLPVVCGPNLALPMVRRPEAKAFDGFHFNSSAYKQIAQDAMDVVQPMATAVEWTTWKKKL 256          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: A0A5D6Y1F6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1F6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.260e-32
Identity = 92/280 (32.86%), Postives = 134/280 (47.86%), Query Frame = 2
Query:   74 VAFRKVLTVAWIRLNKFVSN--SDSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVKLNDPRAAR---SRAFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            +A R  L + W R+   +        ++P   ++HK+VVIGD FA GVGD+V +G  +G+ +HL  L+   DK+R RWE++N G  GS SADW+     + Y           DA+  +V+LG+T+I RD                  + ++    ++L  +CD L ++GK V L  V  S A +         +N  +  + K ++               PV L    D  A R   S AFDG H NS+ YR  A+ A D L PMM AVEW  WK +L
Sbjct:    8 IALRLQLALLWWRVCALLLRLLHTQSLKPANQYFHKVVVIGDDFAAGVGDFVTLGKPAGLAQHLAPLIAHNDKVRHRWEIVNAGVPGSTSADWLLNAPTQYYNSVFAARSTVADAEIVIVMLGSTEI-RDP-----------------KADVVRIRKHLIAICDALCKKGKRVCLATV-ASPAPLKTGDSDTSPLNVALEEFCKSTSTDE-----------LPVVLGPRLDTYAFRRDTSLAFDGYHFNSSAYRLLARNAADFLVPMMTAVEWATWKKQL 257          
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Match: A0A024U869_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U869_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.270e-31
Identity = 91/284 (32.04%), Postives = 143/284 (50.35%), Query Frame = 2
Query:   56 LLGYLAVAFRKVLTVAWIRLNKFVSNSDSQIRPRGDFYHKLVVIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGSISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITAMKKTAQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRRGGVAKRVNRQITLYAKGSARGSDGXXXXXXXGLEPVALVK-LNDP--RAARSRAFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKL 898
            L+ Y+ VA R      W+R  ++++     +    ++ HK+V+IGDGFA G GDW+ M    G++++L + V +EDKIR RW+VINRG   + S+ W P    K YF+ +       DAD  +V++G+ D  R     P  + ++T         +C    N++ +CD LR++GK V  C      A         +  N+ +  Y + S +  D           PV L   L+ P  R + S+AFDG H N+  Y+  A+ +  VL P++ AVEW  WK +L
Sbjct:    4 LVLYVYVAVRTAAAWLWLRFCRWLTQPLRLVLKANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSSTK-YFQDVFSVPQLRDADIVMVIVGSIDSRRKN---PSISPEQT---------VC----NIQAICDALRKKGKRV--CVGSLCHADFDTENETHRVTNQALVDYCE-STKMDD----------LPVKLTPDLSTPVVRRSDSKAFDGYHFNAKAYQQIARDSMAVLTPLLTAVEWATWKKQL 257          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ0_ECTSI2.270e-11655.49SGNH_hydro domain-containing protein n=2 Tax=Ectoc... [more]
T0QG23_SAPDV6.590e-3634.64SGNH_hydro domain-containing protein n=1 Tax=Sapro... [more]
A0A2D4BF39_PYTIN1.190e-3534.14Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
W4FUK0_9STRA3.010e-3532.28SGNH_hydro domain-containing protein n=3 Tax=Aphan... [more]
A0A485L2D1_9STRA3.340e-3532.03Aste57867_14724 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XR96_9STRA8.040e-3432.62SGNH_hydro domain-containing protein n=1 Tax=Aphan... [more]
A0A0W8C468_PHYNI1.010e-3231.23SGNH_hydro domain-containing protein n=15 Tax=Phyt... [more]
A0A1V9ZUG2_9STRA2.560e-3232.51SGNH_hydro domain-containing protein n=1 Tax=Achly... [more]
A0A5D6Y1F6_9STRA9.260e-3232.86Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024U869_9STRA1.270e-3132.04SGNH_hydro domain-containing protein n=1 Tax=Aphan... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2498462..2503249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score361.3
Seed ortholog evalue4.9e-97
Seed eggNOG ortholog2880.D8LEZ0
EggNOG OGs2AVME@1,2RZWN@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionSGNH hydrolase-type esterase domain
Ec32 orthologEc-21_006070.1
Exons4
Model size1908
Cds size1008
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19606.1prot_S-ischiensis_contig8.19606.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 2498493..2502380 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817291.629311-UTR-S-ischiensis_contig8:2498461..24984921622817291.629311-UTR-S-ischiensis_contig8:2498461..2498492Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 2498462..2498492 +
1695741000.9320307-UTR-S-ischiensis_contig8:2498461..24984921695741000.9320307-UTR-S-ischiensis_contig8:2498461..2498492Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 2498462..2498492 +
1622817291.698737-UTR-S-ischiensis_contig8:2502380..25032491622817291.698737-UTR-S-ischiensis_contig8:2502380..2503249Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 2502381..2503249 +
1695741000.9931362-UTR-S-ischiensis_contig8:2502380..25032491695741000.9931362-UTR-S-ischiensis_contig8:2502380..2503249Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 2502381..2503249 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817291.644525-CDS-S-ischiensis_contig8:2498492..24986361622817291.644525-CDS-S-ischiensis_contig8:2498492..2498636Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2498493..2498636 +
1695741000.9485726-CDS-S-ischiensis_contig8:2498492..24986361695741000.9485726-CDS-S-ischiensis_contig8:2498492..2498636Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2498493..2498636 +
1622817291.6605399-CDS-S-ischiensis_contig8:2498803..24989141622817291.6605399-CDS-S-ischiensis_contig8:2498803..2498914Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2498804..2498914 +
1695741000.9608116-CDS-S-ischiensis_contig8:2498803..24989141695741000.9608116-CDS-S-ischiensis_contig8:2498803..2498914Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2498804..2498914 +
1622817291.671556-CDS-S-ischiensis_contig8:2499722..24998031622817291.671556-CDS-S-ischiensis_contig8:2499722..2499803Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2499723..2499803 +
1695741000.971782-CDS-S-ischiensis_contig8:2499722..24998031695741000.971782-CDS-S-ischiensis_contig8:2499722..2499803Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2499723..2499803 +
1622817291.6874056-CDS-S-ischiensis_contig8:2501708..25023801622817291.6874056-CDS-S-ischiensis_contig8:2501708..2502380Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2501709..2502380 +
1695741000.9810421-CDS-S-ischiensis_contig8:2501708..25023801695741000.9810421-CDS-S-ischiensis_contig8:2501708..2502380Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2501709..2502380 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19606.1

>prot_S-ischiensis_contig8.19606.1 ID=prot_S-ischiensis_contig8.19606.1|Name=mRNA_S-ischiensis_contig8.19606.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=336bp
MGLHEAFVLLGYLAVAFRKVLTVAWIRLNKFVSNSDSQIRPRGDFYHKLV
VIGDGFAEGVGDWVVMGGLSGVTRHLQKLVGEEDKIRTRWEVINRGRTGS
ISADWVPGDENKGYFRRIVESKACTDADAFLVVLGTTDIVRDTVGMPITA
MKKTAQDDFNEGELCETLRNLRELCDELRRRGKHVALCNVMTSGAGMGRR
GGVAKRVNRQITLYAKGSARGSDGGGGGGAGGLEPVALVKLNDPRAARSR
AFDGLHLNSAGYRSFAKAAFDVLGPMMVAVEWPMWKAKLGAGVPPRGGGG
AAEGAGEEQSKGPQGPAPVSGVGASGANKKKKKAE*
back to top

mRNA from alignment at S-ischiensis_contig8:2498462..2503249+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19606.1 ID=mRNA_S-ischiensis_contig8.19606.1|Name=mRNA_S-ischiensis_contig8.19606.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4788bp|location=Sequence derived from alignment at S-ischiensis_contig8:2498462..2503249+ (Schizocladia ischiensis KU_0333)
GCCCTCGGTCCCCGAATTATTTGAATCAAGGATGGGGCTCCACGAGGCTT TCGTCCTGCTGGGCTACCTCGCTGTAGCATTTAGGAAAGTCCTAACGGTG GCATGGATACGGTTGAACAAGTTCGTGTCCAATTCGGACTCGCAGATCAG ACCCCGCGGGGACTTTTATCACAAGGTGCGTCTCGACATGGGGATGCCGG TCCTGTGGGGGGCGATTTCACTGTCAGTTCGCGTCTGGTAACTTGATTAC GCTGTCAGTGTGCTTATCTCGTGAGAAACTCACACTCCCGCTCTACCATG CCCGTCCGGCCATATCCCCGCGCCCTGGGCGGGAACGCACAGCTGGTCGT TATAGGCGACGGGTTCGCAGAGGGCGTGGGAGATTGGGTGGTCATGGGCG GGCTAAGTGGCGTCACGCGACATCTGCAGAAGCTCGTGGGGGAGGAGGAC AAGGTATGCGCTTGGCAGGCGAAGGGAAGGGGCTTAGCCCTTATGGGGAA GATGGCGGCACACAACTCTCTACTACTGTAATATACTGAGGAATCAGCAC AGTACTATCAGCAACAACACGGGGCGAGGTGGAATCAGCACAGTAGTACA CCGTGGCACTTGAGCAGCACACCAATTTCAAGTGCTTCGGTGATGATTGA GGGTGCCCTGCGACAGGGCCAAGTGCTGGTAAGCTGCGAACGGTGTCAGG CACGGCCTGGGCGCCGGCGGATACTGTGGTCCCCGTCCCGCTTGTACAAT GCTGGAAATGCCGAGGGCCGAAACGTTCGGCACTACAATGTAGCATGGAC ACTGGTCCCGCCCACCCGTGGCACGATCCACTTCTTCGCTTACCATTAGC TTGCGTAGAGGCAAATGGAACACCATCTATTCGGGTTCAGTGAGTACGAG CAATTTACTTGTACAGTACGTACTTGCAAGTACTCGAGTAGAGTACACAA ATCTACTGCCACCCCAGTGCTGTACTGCCACTTGGCATGGTGCTTCGAAG TAGCGCGTAGTGTATCTTACCGCCGTCCTCTGCGTCTTTACCCCTTACGG GACGACGTTACACTGACTGCAGGGTTGAGTGCACTACTGTCGGAGCTAGT ACGGTATTAACAGGAACAACACAGGGCGAGGTACAGTCCTAGTCGCCCAG GGTCAAGGGCTAAAGTTGCTGCACGCCGCGCTCCCTGCCCCGTCCCTTCC CTTCCGCCGCCGCTTGCTGCCGTGGATCCGATCCAATCCGATCCGCCCTT TGGGGGGGCAGATCCGCACCCGGTGGGAGGTGATTAACCGGGGACGAACG GGGAGCATATCGGCGGACTGGGTGCCCGGTGACGAGAACAAGGTGAGGTG CTAAGTTATGTTGGAGTACAGCAGTCATTGTATCCATCACCTCACCCCCC CCTGAAAGGATTCGCTTTCGCGGTTGTGCAGCACACTTGTTTCCGGGAGA GCATGAAGCGACCTGCGTTTTCGTTGCCCACCTCAGTATGCAAGCGGCGA GTGATTGTGTGATCGTCGGTGGCTGATTGAGCGCGAAAGCGCCCGCCCGC CCGCCCGCGCGGGGGAACTGGTGCTGTCTGCTTGTGGATGGTGCTCTGCA TCTGCGGATGACGGGAGGCATTTTCAGAGATTTCGGGGGAGAGGCCCCCA GGGGGGGGGGCGAGTACCTTACTGTAGTGTTCTCCTGAGCTGCGGCTTTG GAGTGTAAAACGTCTCCGACCAATACCTGCGGTACGGGCAATGGGAGAAC AGGGCTGGCACACGGAGGCAAGTTGCATACGATTTATGTACATTTGCAGG CACGGCAAATCAACTCAACTCGTTGGCCGCGATATCTATGGTAGACTGCA GTCCATGTGATGTACTCGTACAAATGTAATCCCTCTCGATCATACTTTCA AGTACTCTGTAAGTGTTATGACTTGGTGCAGTAGGTGCAAGCACTATAGT GACTTTGTAGGACATCTGCGTTGGCCCCTGCTATGCTTTCGGTAGCTTGC CTGCATAGTGAATCCAACCAGTTTCAGCCCCGACGCGTTGCCGATATGCT GCCGTTTGGACGGGCGCACGTGTGCCGCACTCGAGTGCTTGGAAGTACCC ACGTTGTACGGCACTTTGAAGTATACAGTACAGTACAAACGCTTCGATGA TACTACTTAGTGTAATTTGGCAGCCCTGCGGTGCCCACTGCTTCTTCAGC CTACTGTACTGTAGTACAGTATACATTCCAAGCATCGTTTACAATCCAGT AGCCTGCGGGGCCGCCCTGGCTAAGGGGGGGAGCAGTCCATCGCCCGGGT AAATGGTCCTCCCGTGGCCCGCTTTCTCGTTTTGGGGGATCGATTTCGTA TATATGTATACATGTGGTATATCGTATCTGTGTGTCTGCTCATGTGGTCC GGTGTAAGTGTAAACTTGCAACTTGGCCGTTAGCCCTTGCGTAACAGGCA GCTGGCTGCTGTGCAGATGCACATGCTGTGCATCAGTACTTCCACGTACT CGAAATGGTGGTGTATAGAGAGTCTACTTGTAGAGCCATTGGAAGTACTG GGAGTACTCGTGCGAGTAGGTACTAAGCTTCTGGATGCACGTAGGTATGT AGTAGGTACTTCGTACTTCGAAGTATACTCTACTGTAGCGACGGACGATC GTTGGAATTGGTTCAGTCCAAATTCGAGTGAGTGAGTACTTCGGTGAGTC ATGGGGAGCAACTGCTCTGCTGCTGTTCCAGAGCAGCTACAGAACTTGAA GGGAATCTCAGCAAGTTGCATTGCGCGCCCCTCGCTACACAATTTCCACC ACCGCCGCCACCACCGCCGCCGCCGCGCCAGCACCAGCACCACCGCCACC ACCATCATCACCACCGCCACTGGTGCCCGCCCCTCTCCCTGCCCCCTACG CATGCTCCTGTGCCGCCGCCACCGCTGCCGTGCCCGCCCTCCCCCCACCA CCACTCCTGCTACACTCCTTTGGCCTGCCGTGCTGCCCCCCTTGGCCCGC CCCAAACCTCTCCCCGCCACCCCCACCCCTCCTCCACCTCGGCAACACCC CTGCCCCCACCCCCCTTCCCCCTCCTTGTTCTTAGTTCCTTGATGTGATT GTCACTAGTCTAAGAACACTCAGTGCTTAACTGCGACAACTCCTAATACG AGTACGAGCATAGTCAATCTCACACGCGTGCGATTGTACCTCATTACAAT CTATATGAATCACACCCCCGCCGCCTCCCGCGCGCCCTACCCTGCAGGGG TACTTCCGCCGGATCGTGGAGTCGAAGGCGTGCACGGACGCGGACGCCTT CCTGGTGGTGCTGGGGACCACGGACATCGTGCGGGACACGGTGGGCATGC CCATCACCGCCATGAAGAAGACCGCGCAGGACGACTTCAACGAGGGGGAG CTCTGCGAGACACTCCGGAACCTCCGCGAGCTGTGCGACGAGCTGCGCCG CCGGGGCAAGCACGTCGCGCTGTGCAACGTGATGACCAGCGGCGCCGGCA TGGGCCGCCGCGGCGGCGTCGCCAAGCGCGTCAACCGGCAGATCACCCTC TACGCCAAGGGGTCCGCCCGCGGCAGCGACGGCGGGGGGGGGGGGGGGGC GGGGGGGCTCGAGCCCGTGGCCTTGGTGAAGCTGAACGACCCGCGGGCCG CGCGGTCACGGGCGTTTGACGGGCTGCACCTGAACAGCGCCGGCTACCGC TCCTTTGCCAAGGCCGCGTTCGACGTCCTGGGGCCCATGATGGTGGCCGT CGAGTGGCCCATGTGGAAGGCGAAGCTGGGGGCGGGGGTGCCGCCAAGAG GGGGAGGGGGGGCTGCGGAAGGGGCAGGAGAGGAGCAGTCCAAGGGCCCG CAAGGGCCGGCGCCGGTGAGCGGCGTGGGGGCTTCCGGCGCAAACAAGAA GAAAAAGAAGGCTGAGTGATGGAGAAGGGCAAAGGGCGAGTGCCGTGGAG GGTTTCGCGCTCGCTACCGCCGCCGCTGTGGGGGTGGCTGTGATGGCTGC GATGGACAGTTGCTGAGGAGAGCCTGGCCCGGTGGGGTGGGGCAGCCGGC CTGGCATGTGTGTGCGCGTGGGCCACGAGGGGCAGGTAGCTGTGGCGACG CTTCTTGGCCACTTGTACACAGACGCACAAACACACACGTGCAGATGCAG ACCTACCCTGTTCAGCTCTGCTCGGGCAGGATGCAAGGGAGCAGGGAGGC TTGGCCAGGCCCAGCCAAGCCATGCAGTGCTTGGAAGTACAGCGATACTC AGTACCTCAAGTATACCCGTGTGCCTGCAGTGCAGCAGCTTAGCAGTGCT ATACGCACAGCCACTTGGGCTGATTCGGGTGAGTTGAGCGGCGGGGGCAG CAACCCTGCAATGCAGAAGGAGGAACTCTGTCCAGGTGTGGCACACACCA CAACCCCCGAGACCGAGGCGTGCTTGGCATGTCTCAGGCTTTGAGTTTGG GATTCACACGTGGCCTAAGGTACGCGAGCTGCAGTAGCTGGTTCGTGTTT CCGAGAAAGAACTCAAGGCAGGCGCTTCAAGCTGTGGTGTAAAGTACTTC GAAGTAGGGACTTGTGCGCGGCACGGCACGGGCGCTCGCTCGTCGCCGTG CGCAAACCTGCCGCACCCCTCGCACGCCGGGCGCTTGAATTAGAGAGATT CTACAATAGTCTTTGGAAGATCTTGGCCTTGGGCGCGGCGCTCGCTTGCC AAGTACTTGCAGCGCGGTTGCTTGCGCTTGGCATATGTACAATACACTTG TACGAACTTAAGCAGTATCTAACGATAATGGGGGCACT
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig8:2498462..2503249+

>mRNA_S-ischiensis_contig8.19606.1 ID=mRNA_S-ischiensis_contig8.19606.1|Name=mRNA_S-ischiensis_contig8.19606.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2016bp|location=Sequence derived from alignment at S-ischiensis_contig8:2498462..2503249+ (Schizocladia ischiensis KU_0333)
ATGGGGCTCCACGAGGCTTTCGTCCTGCTGGGCTACCTCGCTGTAGCATT
TAGGAAAGTCCTAACGGTGGCATGGATACGGTTGAACAAGTTCGTGTCCA
ATTCGGACTCGCAGATCAGACCCCGCGGGGACTTTTATCACAAGATGGGG
CTCCACGAGGCTTTCGTCCTGCTGGGCTACCTCGCTGTAGCATTTAGGAA
AGTCCTAACGGTGGCATGGATACGGTTGAACAAGTTCGTGTCCAATTCGG
ACTCGCAGATCAGACCCCGCGGGGACTTTTATCACAAGCTGGTCGTTATA
GGCGACGGGTTCGCAGAGGGCGTGGGAGATTGGGTGGTCATGGGCGGGCT
AAGTGGCGTCACGCGACATCTGCAGAAGCTCGTGGGGGAGGAGGACAAGC
TGGTCGTTATAGGCGACGGGTTCGCAGAGGGCGTGGGAGATTGGGTGGTC
ATGGGCGGGCTAAGTGGCGTCACGCGACATCTGCAGAAGCTCGTGGGGGA
GGAGGACAAGATCCGCACCCGGTGGGAGGTGATTAACCGGGGACGAACGG
GGAGCATATCGGCGGACTGGGTGCCCGGTGACGAGAACAAGATCCGCACC
CGGTGGGAGGTGATTAACCGGGGACGAACGGGGAGCATATCGGCGGACTG
GGTGCCCGGTGACGAGAACAAGGGGTACTTCCGCCGGATCGTGGAGTCGA
AGGCGTGCACGGACGCGGACGCCTTCCTGGTGGTGCTGGGGACCACGGAC
ATCGTGCGGGACACGGTGGGCATGCCCATCACCGCCATGAAGAAGACCGC
GCAGGACGACTTCAACGAGGGGGAGCTCTGCGAGACACTCCGGAACCTCC
GCGAGCTGTGCGACGAGCTGCGCCGCCGGGGCAAGCACGTCGCGCTGTGC
AACGTGATGACCAGCGGCGCCGGCATGGGCCGCCGCGGCGGCGTCGCCAA
GCGCGTCAACCGGCAGATCACCCTCTACGCCAAGGGGTCCGCCCGCGGCA
GCGACGGCGGGGGGGGGGGGGGGGCGGGGGGGCTCGAGCCCGTGGCCTTG
GTGAAGCTGAACGACCCGCGGGCCGCGCGGTCACGGGCGTTTGACGGGCT
GCACCTGAACAGCGCCGGCTACCGCTCCTTTGCCAAGGCCGCGTTCGACG
TCCTGGGGCCCATGATGGTGGCCGTCGAGTGGCCCATGTGGAAGGCGAAG
CTGGGGGCGGGGGTGCCGCCAAGAGGGGGAGGGGGGGCTGCGGAAGGGGC
AGGAGAGGAGCAGTCCAAGGGCCCGCAAGGGCCGGCGCCGGTGAGCGGCG
TGGGGGCTTCCGGCGCAAACAAGAAGAAAAAGAAGGCTGAGTGAGGGTAC
TTCCGCCGGATCGTGGAGTCGAAGGCGTGCACGGACGCGGACGCCTTCCT
GGTGGTGCTGGGGACCACGGACATCGTGCGGGACACGGTGGGCATGCCCA
TCACCGCCATGAAGAAGACCGCGCAGGACGACTTCAACGAGGGGGAGCTC
TGCGAGACACTCCGGAACCTCCGCGAGCTGTGCGACGAGCTGCGCCGCCG
GGGCAAGCACGTCGCGCTGTGCAACGTGATGACCAGCGGCGCCGGCATGG
GCCGCCGCGGCGGCGTCGCCAAGCGCGTCAACCGGCAGATCACCCTCTAC
GCCAAGGGGTCCGCCCGCGGCAGCGACGGCGGGGGGGGGGGGGGGGCGGG
GGGGCTCGAGCCCGTGGCCTTGGTGAAGCTGAACGACCCGCGGGCCGCGC
GGTCACGGGCGTTTGACGGGCTGCACCTGAACAGCGCCGGCTACCGCTCC
TTTGCCAAGGCCGCGTTCGACGTCCTGGGGCCCATGATGGTGGCCGTCGA
GTGGCCCATGTGGAAGGCGAAGCTGGGGGCGGGGGTGCCGCCAAGAGGGG
GAGGGGGGGCTGCGGAAGGGGCAGGAGAGGAGCAGTCCAAGGGCCCGCAA
GGGCCGGCGCCGGTGAGCGGCGTGGGGGCTTCCGGCGCAAACAAGAAGAA
AAAGAAGGCTGAGTGA
back to top