mRNA_S-ischiensis_contig8.19518.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 3.100e-19 Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 1 MPTYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAK 213
MPTYSEM AIL+LKER+GSS PAIKK I + YP L+F Q+R ALKKG ETG F+++K+S+K+SP AK
Sbjct: 1 MPTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAK 71
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 4.490e-19 Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 4 PTYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAK 213
PTYS MV +AI +LKER GSS PA+KK I + YP L+F QMR ALKKG E+GKF+++KSS+KLSP AK
Sbjct: 7 PTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAK 76
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 2.920e-18 Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 4 PTYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAKVKATK 228
PTY+ MV +AI +LKER+GSS AIKK IT+ YP L+F QMR ALKKGVE+GKF+++K+S+KLS AK A K
Sbjct: 6 PTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 2.000e-17 Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 4 PTYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAK 213
PTY+ MV +AI +LKER+GSS AIKK IT+ YP L+F QMR ALKKGVE+GKF+++K+S+KLSP AK
Sbjct: 99 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAK 168
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: A0A835Z9C5_9STRA (H15 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9C5_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.600e-17 Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 1
Query: 1 MPTYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAK 213
MPTY EM+ +AI++LK+RSGSS AIKK+I + DL+F Q +R+ALKKGVE+GK ++IK+S+KL+ S K
Sbjct: 1 MPTYYEMIKDAIMALKDRSGSSPAAIKKYIEANNKDLNFAQHSLRMALKKGVESGKLIKIKASYKLADSEK 71
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: A0A7S2SPL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPL4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 7.390e-17 Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 1 MPTYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAK 213
MPTY EM A+L+LK+RSGSSN AIKK+I + YP + F Q +R ALKKGVE+G +IK+S+KL+ AK
Sbjct: 18 MPTYLEMTKAALLALKDRSGSSNSAIKKYIEANYPGVKFAQHSLRAALKKGVESGMLEKIKASYKLTEKAK 88
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 2.640e-16 Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 19 MVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAK 213
MV +AI +LKER GSS PA+KK I + YP L+F QMR ALKKG E+GKF+++KSS+KLSP AK
Sbjct: 1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAK 65
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 3.110e-16 Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 19 MVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAK 213
MV +AI SLKER+GSS AIKK IT+ YP L+F QMR ALKKGVETGKF+++KSS+KLS AK
Sbjct: 1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAK 65
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 3.300e-16 Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 1 MPTYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLS-----PSAKVKATKK 231
MPTY EM EA+ +LKER+GSS AIKK IT+ YP L+F MR ALKKGVE+GKF+++K+S+KLS P+AK + +K
Sbjct: 1 MPTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAKPQEAQK 82
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Match: A0A7S3Y4H7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4H7_HETAK) HSP 1 Score: 80.1 bits (196), Expect = 4.260e-16 Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 7 TYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKGVETGKFVQIKSSFKLSPSAKVKATKK 231
TY +M EAIL+LK+R+GSS AIKK+I S Y ++FQQ +RLALKKGVE GK +++K+S+K+S K+ A KK
Sbjct: 43 TYYDMAKEAILALKDRTGSSPQAIKKYIESTYKKITFQQHSLRLALKKGVEAGKLIKVKASYKISAGEKL-AVKK 116 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19518.1 >prot_S-ischiensis_contig8.19518.1 ID=prot_S-ischiensis_contig8.19518.1|Name=mRNA_S-ischiensis_contig8.19518.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=169bp MPTYSEMVTEAILSLKERSGSSNPAIKKFITSKYPDLSFQQFQMRLALKKback to top mRNA from alignment at S-ischiensis_contig8:1886926..1887432- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19518.1 ID=mRNA_S-ischiensis_contig8.19518.1|Name=mRNA_S-ischiensis_contig8.19518.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=507bp|location=Sequence derived from alignment at S-ischiensis_contig8:1886926..1887432- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1886926..1887432- >mRNA_S-ischiensis_contig8.19518.1 ID=mRNA_S-ischiensis_contig8.19518.1|Name=mRNA_S-ischiensis_contig8.19518.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1014bp|location=Sequence derived from alignment at S-ischiensis_contig8:1886926..1887432- (Schizocladia ischiensis KU_0333)back to top |