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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 517 |
| Cds size | 510 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817259.4377863-UTR-S-ischiensis_contig8:1841649..1841654 | 1622817259.4377863-UTR-S-ischiensis_contig8:1841649..1841654 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 1841650..1841654 + |
| 1695740976.3340204-UTR-S-ischiensis_contig8:1841649..1841654 | 1695740976.3340204-UTR-S-ischiensis_contig8:1841649..1841654 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 1841650..1841654 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817259.4486911-CDS-S-ischiensis_contig8:1841654..1841813 | 1622817259.4486911-CDS-S-ischiensis_contig8:1841654..1841813 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 1841655..1841813 + |
| 1695740976.3542006-CDS-S-ischiensis_contig8:1841654..1841813 | 1695740976.3542006-CDS-S-ischiensis_contig8:1841654..1841813 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 1841655..1841813 + |
| 1622817259.4626958-CDS-S-ischiensis_contig8:1842936..1843287 | 1622817259.4626958-CDS-S-ischiensis_contig8:1842936..1843287 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 1842937..1843287 + |
| 1695740976.3666768-CDS-S-ischiensis_contig8:1842936..1843287 | 1695740976.3666768-CDS-S-ischiensis_contig8:1842936..1843287 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 1842937..1843287 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19502.1 >prot_S-ischiensis_contig8.19502.1 ID=prot_S-ischiensis_contig8.19502.1|Name=mRNA_S-ischiensis_contig8.19502.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=170bp
MSWPEGARAPVRPAHPAPLSVLPAVDARLRGLWDFFRASLENGRGRSAVR
GYGGRVGSPPDGRPQGDPALAGGGGGGVTDGAHVDEQFDTWSFAWMPAIE
DFLPRPPPGVHGAPPPAPGTALSAAGPYPPAVAAGPDYYSALARAGEGAP
GAGGEVAADAPGAAQPWEVW back to topmRNA from alignment at S-ischiensis_contig8:1841650..1843287+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19502.1 ID=mRNA_S-ischiensis_contig8.19502.1|Name=mRNA_S-ischiensis_contig8.19502.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1638bp|location=Sequence derived from alignment at S-ischiensis_contig8:1841650..1843287+ (Schizocladia ischiensis KU_0333)
CGTGGATGTCTTGGCCAGAGGGGGCTAGAGCGCCCGTGCGACCGGCCCAT
CCAGCTCCATTGTCAGTCCTCCCTGCGGTAGACGCCAGGCTACGCGGCCT
CTGGGACTTCTTTCGGGCGTCCTTGGAGAATGGACGCGGGCGTTCCGCCG
TCCGCGGCTATGGGGTGAGTGGCTTGGGCTGGCTTGCAAATGTGCTGAAT
AGCTGCTGACCGTGTTTCGTGCCTCATGATGGAGAGGGTTTTGCCCATTG
CCGGCCCCTTGCTCTATCTGTGTAAATCTGATCCATCACACCGGTCCATT
TTGTACGCCCGGGGAATATGAGTACATGATGCACTGATGAGCACACATGA
ACATATTATTATGTGCCGGATCTTCTTGTTCTGCTACCTTTGACTGAACT
GCTGGAGTTTTACTGTTTTATGTAACGGCAGTATCTCAAAACTGCTAAGC
GCAAACTTGTGCTTTATATGCGTTGGAGGTATGCACACTGTATACATCAT
GTACAGTACCCTGCGATTGGATCGTAGATAAGCTAGCTCTGGTAATTTTA
TGGGTACTTGAAAGTAGCTCATAGTGAATTTCGCTTTGTTATGTGAGATG
CTGAACTTTCCTTTTTTCGTTTTCGAAGGAAAACGTTCGATACATTCTTG
GGCCGTATTTGAGTGCTTTGGATTTACTGCACGTGAGGCACGAGCAGCAT
TCAATGTACACGAAGTACTACACACAGTGCCGGGCACCTGTTTGTCCTCG
AGGTTTTGTATTGTATCTTGGATATTGTTTGTCTTTTGTGGGGCACATGA
CTTCGTTTACATTCCTGAAATGGCTGTTTTAGCCTGTCAGTGATCGCCGC
CAGCGGTTGATCCCTCGTATCTGAACTCCAACCCAGCCCGTCGTCCATCT
GACCCAATCAGCTGATCCACCAACTGGATATCGACCCGATCCGGTTTCGA
TCAGGCCCATACAGTTAATTGGGGTTGGACGCCGATATCCAGACTCTCTG
ATGGGTGGCCACAGGTCTGTTTTCATTGGCCGGTCGCAATGCACAACCAC
GGTAGTACCACGGCTTGTGAATGGTAAGACAAGTTGATAAAAAGATGCTT
GTGGCCGCCGGCGGGGACATCTTGTGCCAATATCGAAGCCCGTCTGTCGA
TTTTGCGCCACGAGGGGCCCTCCAACACGCATGGTTCCTACTTCAGTACA
ATAGAGCTCTACTGTAGCATAGCAGTCGTGAGTAGAGTACGACCCCTCCC
CAACCCCCGCCTGCTCGTGCTGCACGGCCGTCAGCAGGGACGGGTGGGCT
CGCCGCCCGATGGCCGCCCCCAGGGGGACCCCGCCCTTGCCGGCGGTGGC
GGCGGTGGCGTTACAGACGGGGCGCATGTGGACGAGCAATTCGACACGTG
GAGCTTTGCCTGGATGCCAGCCATCGAGGACTTCTTACCCCGCCCCCCGC
CAGGCGTCCACGGTGCCCCACCACCAGCCCCGGGGACGGCCCTGTCGGCT
GCCGGCCCCTACCCTCCCGCCGTGGCCGCGGGGCCCGACTATTATTCGGC
CCTGGCAAGGGCGGGGGAAGGGGCCCCTGGGGCAGGAGGAGAGGTCGCGG
CGGATGCGCCGGGGGCAGCGCAGCCTTGGGAGGTGTGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:1841650..1843287+ >mRNA_S-ischiensis_contig8.19502.1 ID=mRNA_S-ischiensis_contig8.19502.1|Name=mRNA_S-ischiensis_contig8.19502.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1020bp|location=Sequence derived from alignment at S-ischiensis_contig8:1841650..1843287+ (Schizocladia ischiensis KU_0333)
ATGTCTTGGCCAGAGGGGGCTAGAGCGCCCGTGCGACCGGCCCATCCAGC
TCCATTGTCAGTCCTCCCTGCGGTAGACGCCAGGCTACGCGGCCTCTGGG
ACTTCTTTCGGGCGTCCTTGGAGAATGGACGCGGGCGTTCCGCCGTCCGC
GGCTATGGGATGTCTTGGCCAGAGGGGGCTAGAGCGCCCGTGCGACCGGC
CCATCCAGCTCCATTGTCAGTCCTCCCTGCGGTAGACGCCAGGCTACGCG
GCCTCTGGGACTTCTTTCGGGCGTCCTTGGAGAATGGACGCGGGCGTTCC
GCCGTCCGCGGCTATGGGGGACGGGTGGGCTCGCCGCCCGATGGCCGCCC
CCAGGGGGACCCCGCCCTTGCCGGCGGTGGCGGCGGTGGCGTTACAGACG
GGGCGCATGTGGACGAGCAATTCGACACGTGGAGCTTTGCCTGGATGCCA
GCCATCGAGGACTTCTTACCCCGCCCCCCGCCAGGCGTCCACGGTGCCCC
ACCACCAGCCCCGGGGACGGCCCTGTCGGCTGCCGGCCCCTACCCTCCCG
CCGTGGCCGCGGGGCCCGACTATTATTCGGCCCTGGCAAGGGCGGGGGAA
GGGGCCCCTGGGGCAGGAGGAGAGGTCGCGGCGGATGCGCCGGGGGCAGC
GCAGCCTTGGGAGGTGTGGGGACGGGTGGGCTCGCCGCCCGATGGCCGCC
CCCAGGGGGACCCCGCCCTTGCCGGCGGTGGCGGCGGTGGCGTTACAGAC
GGGGCGCATGTGGACGAGCAATTCGACACGTGGAGCTTTGCCTGGATGCC
AGCCATCGAGGACTTCTTACCCCGCCCCCCGCCAGGCGTCCACGGTGCCC
CACCACCAGCCCCGGGGACGGCCCTGTCGGCTGCCGGCCCCTACCCTCCC
GCCGTGGCCGCGGGGCCCGACTATTATTCGGCCCTGGCAAGGGCGGGGGA
AGGGGCCCCTGGGGCAGGAGGAGAGGTCGCGGCGGATGCGCCGGGGGCAG
CGCAGCCTTGGGAGGTGTGG back to top
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