mRNA_S-ischiensis_contig8.19462.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19462.1
Unique NamemRNA_S-ischiensis_contig8.19462.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: A0A835Z600_9STRA (Heme oxygenase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z600_9STRA)

HSP 1 Score: 290 bits (741), Expect = 8.000e-94
Identity = 146/223 (65.47%), Postives = 169/223 (75.78%), Query Frame = 1 
Query:  556 MSKADPNSFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAYPEDFQGGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSIS 1224
            MSKADPNSFVQG+MR  AM+LHTRDQAPREG+QE  GKKF+EWAPTR GYLQFLVDSRAVY+  +E V A+ AL  LRDTGLER AAL++DIAW+L  YPE     V+  A+A    Y  FL   A +S   FVCHFYNHYFAHTAGGIMIG+KVAD CLGG+ L FY+W      DVRALL+AVR  IDAMA GW  EE++ CL+ET R+F +GG LL SI+
Sbjct:    1 MSKADPNSFVQGEMRGVAMKLHTRDQAPREGQQEETGKKFAEWAPTRAGYLQFLVDSRAVYSTFDEVVGANDALAALRDTGLERTAALEKDIAWMLETYPELATPPVSDNAAA----YCAFLKDIAAKSVPGFVCHFYNHYFAHTAGGIMIGKKVADLCLGGQKLAFYQWAS----DVRALLDAVRVNIDAMADGWSREEKDECLDETARTFKYGGSLLGSIT 215
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BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: A0A6H5KUU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU7_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 5.110e-87
Identity = 156/288 (54.17%), Postives = 190/288 (65.97%), Query Frame = 1 
Query:  388 WVFEPRTRRAAAARPCAVPASMCATSPSSSKSEVDVAEPAEGKTARVS--GKGHGHGGMS-KADPNSFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAYPEDFQ-----GGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSISS 1227
            W   P  RRAAA     VP  +  TS ++     DVA  AEGK A+          GG+  K D NSFVQ DMR+AAM+LHTRDQ+P+EG+QEN+G  FS+W P+R GYLQFLVDS+ VY ALEEA  + P L   R+TGLER  AL +DIAW+L  Y + +       G AP  +    EYA FL      S  AF+CH+YNHYFAHTAGG MIGRKVA++CL GRTLEFY+WG     DV+ LL+ VR +IDAMA GW  EE+EAC+ ET R+F +GG LLSSI+S
Sbjct:   51 WAASPLRRRAAA-----VP--LWCTSQTT-----DVAATAEGKGAKKEEXXXXXXXGGVKPKTDKNSFVQWDMRRAAMKLHTRDQSPKEGKQENKGTPFSDWKPSRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLETYSDSWAEGGGGDGKAPSPTENALEYASFLREKVASSLPAFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYQWGAD---DVKVLLDGVRVKIDAMAKGWSEEEKEACVSETARTFKYGGSLLSSITS 323
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BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: D7FK52_ECTSI (Heme oxygenase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK52_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 7.280e-78
Identity = 170/356 (47.75%), Postives = 206/356 (57.87%), Query Frame = 1 
Query:  265 VLLTAEDSRAFQLGGALIVRAFQR--PLS-TGRRAGGALHPHSR----WVFEPRTRRAAAARPCAVPASMCATSPSSSKSEVDVAEPAEGKTARVSGKGHGH-----GGMS-KADPNSFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAYPEDFQ-----GGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVA------------------DACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFA----FGGRLL 1212
            VL TA    AF+ G      AFQ   P S +GR    A    S     W      RRAAA     VP  +  TS ++     DVA  AEGK A+   K  G      GG+  K D NSFVQ DMR+AAM+LHTRDQ+P+EG+QEN+G KFS+W P+R GYLQFLVDS+ VY ALEEA  + P L   R+TGLER  AL +DIAW+L AYP+ +       G AP  +    EYA FL      +   F+CH+YNHYFAHTAGG MIGRKVA                  D+CL GRTLEFY+WG     DV+ LL+ VR +IDAMA GW  EE+EAC+ ET R+F     F GR++
Sbjct:    3 VLSTATAVLAFERGTVTTSSAFQVLVPSSGSGRSTAAARRSSSNKAFPWAASSFRRRAAA-----VP--LWCTSQTT-----DVAATAEGKGAK---KEEGXXXXXXGGVKPKTDKNSFVQWDMRRAAMKLHTRDQSPKEGKQENKGTKFSDWKPSRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLEAYPDSWAEGGGGDGKAPSPTENALEYASFLREKVASTLPGFMCHYYNHYFAHTAGGRMIGRKVAESALGVFFKHVSAFPFRSDSCLDGRTLEFYQWGSD---DVKVLLDGVRVKIDAMAKGWSEEEKEACVSETARTFNLRVFFVGRMV 340
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BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: A0A8J5XQF0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQF0_DIALT)

HSP 1 Score: 218 bits (555), Expect = 7.170e-66
Identity = 124/228 (54.39%), Postives = 152/228 (66.67%), Query Frame = 1 
Query:  553 GMSKADPNSFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAYPEDFQGG---VAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSISS 1227
            G S      FVQ +MRKAAM LHTRDQA +EG+Q+ + K  ++W PTR GYLQFLVDSR VY A+EE V     L TL++TGLER  ALD+DIAW L       +GG     P  +ATG  YA  L R    S  AF+CHFYN+YFAHTAGG MIG++++D  L GR LEFYKW     GDV+ LL+A R+ IDAMAA W  +ER+ACL +T  SF  GG L++S+ S
Sbjct:    2 GGSTTQATGFVQTEMRKAAMALHTRDQA-KEGQQQAQ-KPLAKWEPTRKGYLQFLVDSRHVYGAVEEIVGERAELATLKNTGLERTVALDKDIAWFL-----SDEGGCQPTTPTEAATG--YAAELKRL---STPAFICHFYNYYFAHTAGGRMIGKQMSDMLLDGRVLEFYKWD----GDVKELLDAARQHIDAMAASWTQDERDACLAQTAASFKGGGGLMASLRS 213
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BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: A0A6V1QVP2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QVP2_HETAK)

HSP 1 Score: 218 bits (555), Expect = 2.820e-65
Identity = 115/216 (53.24%), Postives = 146/216 (67.59%), Query Frame = 1 
Query:  577 SFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAYPEDFQGGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSIS 1224
            SFVQ DMR  AM+LHT+DQA REGEQ+ + K  S+W+P    YLQFLVDSR VY  +E+  N++P LE  ++TGLER AALD+DIAW+   +  D      P AS  G+ YA+ L      S   FVCH+YNHYFAHTAGG+MIGRK+++A L G TLEFYKW     GDV+ +  AV   IDA+A  W   +++ CLEETG +F +GG LLS +S
Sbjct:   47 SFVQNDMRAYAMKLHTKDQA-REGEQKAQ-KPVSKWSPEPINYLQFLVDSRLVYQTMEDICNSTPGLEKFQNTGLERTAALDQDIAWMSEKFSVD-----VPAASPLGQGYADVLREVVGRSLPGFVCHYYNHYFAHTAGGLMIGRKISEALLEGATLEFYKWA----GDVKEMGMAVIRDIDALADTWSDAQKQECLEETGNTFRYGGALLSHLS 251
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BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: A0A7S2RHC9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHC9_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.360e-61
Identity = 118/221 (53.39%), Postives = 141/221 (63.80%), Query Frame = 1 
Query:  559 SKADPNSFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAYPEDFQGGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSI 1221
            +KA P  FV G+MR  AM LHT+DQA +EGE++ +    ++W+PT  GYLQFL DSR VY  LE+ V     L +LR TGLER  ALD DI WL        Q    P    +G+ YAE L + ARES   F  HFYN+YFAH+AGG MIGRK+ADA L GR LEFYKW     GDV+ LL AV   ID +AA W  EER+ACLEET R+F  GG LL  +
Sbjct:   67 TKAPP--FVNGEMRPYAMSLHTKDQA-KEGERKAQKAPLAKWSPTIEGYLQFLTDSRHVYRTLEKIVAEYEELGSLRSTGLERGDALDADIQWLCTLASPPLQ---VPPVGKSGRHYAEVLEQVARESVPQFTNHFYNYYFAHSAGGRMIGRKMADALLDGRELEFYKWE----GDVKELLGAVSGSIDELAATWTAEERQACLEETARAFQLGGALLGYL 277
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BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: A0A2K3D9D4_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D9D4_CHLRE)

HSP 1 Score: 204 bits (518), Expect = 1.170e-59
Identity = 108/214 (50.47%), Postives = 140/214 (65.42%), Query Frame = 1 
Query:  592 DMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAY---PEDFQGGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSIS 1224
            +MRK AM+LHT+DQAP+EGE+E    K   W PTRPGYL+FLV+S+ V+   E  VN+S A + LR+TGLER   L  DIAW+  ++   P D +    P+ +A    Y  FL + A+  P AF+CH+YN YFAHTAGG MIG KV+   L G+TLEFYKW     GDV   LE VR+ I+ MA GW P E+E CL ET  SF + G++L +I+
Sbjct:   60 EMRKVAMKLHTKDQAPKEGEKE--APKQGPWTPTRPGYLRFLVESKEVFDTFERLVNSSDAYKALRNTGLERGPGLAADIAWMEQSFQLAPPDMK----PDGAAA--TYVAFLEKLAKTDPPAFICHYYNFYFAHTAGGRMIGNKVSSMLLDGQTLEFYKWQ----GDVNEHLEGVRKSINVMAEGWTPAEKEHCLAETESSFKYSGQILRAIT 261
[Close]
BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: A0A0G4I7Y0_9ALVE (ATP-dependent DNA helicase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I7Y0_9ALVE)

HSP 1 Score: 206 bits (523), Expect = 9.860e-58
Identity = 111/217 (51.15%), Postives = 147/217 (67.74%), Query Frame = 1 
Query:  577 SFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAY-PEDFQGGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSIS 1224
            SF++G +RKAAM+LHTRDQ+ +EGEQ+ +     +W PT   YLQFLVDS+ VYA LE+ V A  AL +LR+TGLER  AL++D+ W+   + P        PE ++ GKEYAE L + A+ES   FV HFYN YFAHTAGG MIG+++A+  L G TL+FY+W     GDV+ALLE     IDA+A  W   ER+AC++ET  +F  GG +LS +S
Sbjct:  282 SFIKGPLRKAAMKLHTRDQS-KEGEQKAQ-TPVKKWDPTLADYLQFLVDSQHVYAVLEDLVGADEALSSLRNTGLERREALEKDVVWITEEFAPSKGVQLTRPEVASPGKEYAETLQQAAKESIPRFVNHFYNFYFAHTAGGRMIGKRMAELLLDGETLKFYQWE----GDVKALLERTSGAIDALARSWTESERQACVDETAAAFKGGGAVLSHLS 492
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BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: K8FER7_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FER7_9CHLO)

HSP 1 Score: 199 bits (507), Expect = 1.980e-57
Identity = 110/221 (49.77%), Postives = 143/221 (64.71%), Query Frame = 1 
Query:  580 FVQGDMRKAAMRLHTRDQAPREGEQENRG----KKFSEWAPTRPGYLQFLVDSRAVYAALEEAV--NASPALETLRDTGLERVAALDEDIAWLLVAYPEDFQGGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSIS 1224
            FV+ +MR  AM+LHTR+QAP+EGE++       K  ++W PT+ GYL FLV+S+AVY A+E  V  NA P  +   D GLER  ALD+DI W    + E  +  V PEA   GKEYAEFL   A+ESP  F+CHFYN YFAH+AGG MIGRKV++  L G+ LEFY W + GG  +   L  V+E+++  A  W  EE++ CLEET +SF   G LL  I+
Sbjct:   97 FVE-EMRFVAMKLHTREQAPKEGEKKAEKVPEQKPMAQWQPTKEGYLNFLVESKAVYDAMEAIVASNADPMYKAFIDCGLERSEALDKDIEW----FRETLEMEV-PEAKGAGKEYAEFLKNLAKESPPRFLCHFYNVYFAHSAGGKMIGRKVSEMILDGKELEFYVWNKNGG--LEKSLAEVKEKLNEAAEKWSREEKDVCLEETSKSFQLSGALLRLIA 309
[Close]
BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Match: A0A0M0JY97_9EUKA (Heme oxygenase 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JY97_9EUKA)

HSP 1 Score: 197 bits (502), Expect = 2.840e-57
Identity = 110/218 (50.46%), Postives = 136/218 (62.39%), Query Frame = 1 
Query:  577 SFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSEWAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDIAWLLVAYPEDFQGGVAPEASATGKEYAEFLSRTARESPAA-FVCHFYNHYFAHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDV-RALLEAVRERIDAMAAGWGPEEREACLEETGRSFAFGGRLLSSIS 1224
            SFVQ +MR AAM LHTRDQAPREG+Q  + +  S W PTR  YLQFLVDSR VY  LEE V  +    + R +GLER AALD+DIAW    + E       P   + G+ YA  L +   +     FVCHFYN YFAHTAGG MIG+++A   L G TLEFY+W     GDV + LL  +R +IDA+ AGW  E+++ CL ET  SF  GG ++  IS
Sbjct:   52 SFVQTEMRGAAMALHTRDQAPREGKQPAQ-RPMSSWQPTRADYLQFLVDSRKVYRTLEEIVEETEMFASFRASGLERGAALDKDIAWFAATHGEK-----EPAVKSQGETYAAELRKMVADGELERFVCHFYNFYFAHTAGGRMIGKRMAGMLLDGHTLEFYQWD----GDVDQVLLPGLRTKIDALVAGWSREQKDKCLAETANSFKGGGAMMQHIS 259
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z600_9STRA8.000e-9465.47Heme oxygenase-like protein n=1 Tax=Tribonema minu... [more]
A0A6H5KUU7_9PHAE5.110e-8754.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK52_ECTSI7.280e-7847.75Heme oxygenase 1 n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A8J5XQF0_DIALT7.170e-6654.39Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A6V1QVP2_HETAK2.820e-6553.24Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2RHC9_9STRA4.360e-6153.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2K3D9D4_CHLRE1.170e-5950.47Uncharacterized protein n=2 Tax=Chlamydomonas TaxI... [more]
A0A0G4I7Y0_9ALVE9.860e-5851.15ATP-dependent DNA helicase n=1 Tax=Chromera velia ... [more]
K8FER7_9CHLO1.980e-5749.77Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
A0A0M0JY97_9EUKA2.840e-5750.46Heme oxygenase 1 n=1 Tax=Chrysochromulina tobinii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1595892..1600306 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.5
Seed ortholog evalue4.4e-66
Seed eggNOG ortholog2880.D7FK52
Preferred nameHY1
KEGG rclassRC01270
KEGG koko:K21480
KEGG ReactionR11579
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
EggNOG free text desc.heme oxidation
EggNOG OGsCOG5398@1,KOG4480@2759
EC1.14.15.20
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionheme oxygenase 1
Ec32 orthologEc-04_005790.1
Exons4
Model size1230
Cds size999
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19462.1prot_S-ischiensis_contig8.19462.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 1595892..1600075 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817283.0078344-CDS-S-ischiensis_contig8:1595891..15964261622817283.0078344-CDS-S-ischiensis_contig8:1595891..1596426Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1595892..1596426 -
1695740994.1338582-CDS-S-ischiensis_contig8:1595891..15964261695740994.1338582-CDS-S-ischiensis_contig8:1595891..1596426Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1595892..1596426 -
1622817283.0236733-CDS-S-ischiensis_contig8:1597341..15974701622817283.0236733-CDS-S-ischiensis_contig8:1597341..1597470Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1597342..1597470 -
1695740994.1464-CDS-S-ischiensis_contig8:1597341..15974701695740994.1464-CDS-S-ischiensis_contig8:1597341..1597470Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1597342..1597470 -
1622817283.0400271-CDS-S-ischiensis_contig8:1599259..15994211622817283.0400271-CDS-S-ischiensis_contig8:1599259..1599421Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1599260..1599421 -
1695740994.1628869-CDS-S-ischiensis_contig8:1599259..15994211695740994.1628869-CDS-S-ischiensis_contig8:1599259..1599421Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1599260..1599421 -
1622817283.05672-CDS-S-ischiensis_contig8:1599902..16000751622817283.05672-CDS-S-ischiensis_contig8:1599902..1600075Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1599903..1600075 -
1695740994.17853-CDS-S-ischiensis_contig8:1599902..16000751695740994.17853-CDS-S-ischiensis_contig8:1599902..1600075Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1599903..1600075 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817283.0715625-UTR-S-ischiensis_contig8:1600075..16003061622817283.0715625-UTR-S-ischiensis_contig8:1600075..1600306Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 1600076..1600306 -
1695740994.1879394-UTR-S-ischiensis_contig8:1600075..16003061695740994.1879394-UTR-S-ischiensis_contig8:1600075..1600306Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 1600076..1600306 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19462.1

>prot_S-ischiensis_contig8.19462.1 ID=prot_S-ischiensis_contig8.19462.1|Name=mRNA_S-ischiensis_contig8.19462.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=333bp
MRSNVLFLVGGVLLTAEDSRAFQLGGALIVRAFQRPLSTGRRAGGALHPH
SRWVFEPRTRRAAAARPCAVPASMCATSPSSSKSEVDVAEPAEGKTARVS
GKGHGHGGMSKADPNSFVQGDMRKAAMRLHTRDQAPREGEQENRGKKFSE
WAPTRPGYLQFLVDSRAVYAALEEAVNASPALETLRDTGLERVAALDEDI
AWLLVAYPEDFQGGVAPEASATGKEYAEFLSRTARESPAAFVCHFYNHYF
AHTAGGIMIGRKVADACLGGRTLEFYKWGEGGGGDVRALLEAVRERIDAM
AAGWGPEEREACLEETGRSFAFGGRLLSSISS*
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mRNA from alignment at S-ischiensis_contig8:1595892..1600306-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19462.1 ID=mRNA_S-ischiensis_contig8.19462.1|Name=mRNA_S-ischiensis_contig8.19462.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4415bp|location=Sequence derived from alignment at S-ischiensis_contig8:1595892..1600306- (Schizocladia ischiensis KU_0333)
CAGCGGCGGCGTGCGCCTTTCTCCCTCGCGTCGCAAAGCTAGATAGCCTT
CCCCCAGCTCCGGGCGGACCTTTTCGTGCTCTTTTTCTTCGGAAGTTGCT
GGTGGCGCGGTGATAAGGCTTCACTTCCGCGCCTGTTTGCCCCGAGGTCG
ACTGAGTCCGGCCGGCCCATTTCCGCGGTATTTTCTTTGGCCTGAGACAT
CTCGGGCACCGGAGCGGCGACAACAGCGGGGATGAGGTCAAATGTGCTAT
TCTTGGTGGGGGGGGTGCTGCTCACAGCTGAAGACAGCAGGGCATTCCAG
CTGGGCGGGGCGCTCATCGTGAGGGCATTCCAGAGGCCACTGTCGACAGG
GCGACGGGCCGGCGGCGCTCTGCACCCCCATTCCAGATGGGTCTTCGAAC
CACGGTGCGCCACTCTTACTCTTCCCTTACTCGCCTCGCTGCATGACCTG
GACAAGCTTTCGCAGTGTCGGACCGCCCATGTGTTACCCCCACGGACATG
TCATGGCGCTGTTTCGCTCCATGTGTGCGCCTCTCAGGCAGCGCCACCCG
CCTCCTGTCTTCCAGCCCTGGTTTGGCACGCACCCTGTAGGCTAACACGG
GGCACGAGACCGCCTCCGTATGCGCGACATACCACAGAGAATGCAGCAGG
CTTTCGCTCGCACCTTTGCTTGGTGACACTTGGAGACCCTCTGTACTGTA
GAATGGAACACCACTCCATGCCCTATTTATTTGATTTGTTTTTATTTTAT
TTTATCTCGCTGCCATCCGTGCGTCCACACCCTCCACCGCTCTCTGTGGC
CCTCCCCCCCTCCCTGCCCGCCGGCTGCCCCTTTGGCACGCCTGCTTATC
CCCGTGTAACTCACTTCTGCGTGTGGTGTGCACAGGACTCGACGGGCGGC
AGCTGCTCGGCCATGCGCGGTGCCCGCGTCCATGTGCGCAACGTCGCCGT
CATCATCAAAGAGCGAGGTTGACGTGGCGGAGCCCGCAGAGGGCAAGACG
GCCCGAGTTTCCGGGAAGGGGCACGGGCACGGCGGAATGTCAAAAGCGTG
AGTCGCGCACCTCTCAGCGTGCCGGCAATGTGTGTATTCTCCAGCGCTAC
TGTACGTAGCATACGTCTACATGTACTCGGTTTGTGCTTGCTGTAAGTCA
GGCCTGAGAATGTGGACCACGTTCCTTGACCGACTATAGACGGAGCAGGC
CACCTGTGGCCCCTGGCAGAACCCGGGTGAGAGGGCGAGGCCACCCCTCC
GTCCTGGGCGATTTGGCTTTTCACGTGTACGAGTATATACGAAGTACGAG
TATATATATATATATTGGGCGGGGGGGGACTAGAGGGCCGGGGGGGGTGG
GGGCTTGGGAGGGCAGCGAGGCAGTGTTGTGCAGTATTACTACGATATAT
GCCACAGGACATGTACTGTCTGAACGAGTACAGGAACAACCATAGTGTCT
TTGTTGCACCCACCGGAAGTTAACCATGTCTACAATAGTGTTTAGTCGTG
TTAGAATATTCTGTGGGTTGTGCTTGTGTCGTTCTATCTGGACTGTTGAG
TCGCATCGAAGTGCCCCGCCCCACGACGGACACGCAGTCCTACGTTGTTG
CAGTTATTGCACTTGTGCCTACGAGGCGGTGTGCAGTATATATATATATA
TACTACGTAGTACAACATGATGTGATGTGATGTCAAACTGCAATACATTG
GAGTACACATCACATCACATCAAGTACGTAATGTGATTATTCGAGTATAT
ATATATACATACTCATACTACAGTATACGAAGATGTACTCACATGTATAT
GTACTCATGTTGTGCTTGCTGTAGTCCCGAGACCATTGAGCACGCACCGT
TGACGACGGAGCCATGAGTACAGTAGCATAAATGTACTCCATGCATTCAC
GTCTCGTCCGAGGCGCGTGGTCAATGGTCTCGGGACTACGGCAAGCACCA
CGTGAGTACGTATATTCCCGTAAGCATACATATACTCACGCTGTTCTTGC
CCTAGCCCTGAAACCATTGACCCTGCGCCTCGAACGAGGCGGAGTAGTGC
TGTAGTAGTTTATGCTGGGTTCGTTGGCTAAGCATCGCTTTTGGCGGTTT
CAGGTTGAGGGCACATCGCCAAGGAAAGGGGTAGCACCTCAGGCATCAGC
GTGTGGTAAAGGGGGGGCGGGGCTGGGCAGCACGCTATCCGTGTCGGCAT
TCTTGTACGTTCGAGCCAGAGCAAGTACTTGTGCCGTGACAGCTGCGGTG
GACATCTTTCCGACTCCCTTCGGGGTGTGTCTTTTGTCACACAATACTGC
TTTCTTTGTTCCTGGCGGCGGCAAAGCGAAATGTAAACGCGGTTCATGTA
CCCCGTACTACTACTGTAGTACCGCAGTACTTTATACGTACAGTAGTAGT
AGTACTTCGGAGTACTTACTACTGATTTGTCTCAGTACACTCGTACTCAA
GTAGTGGCACAGTAGTGAACAACAGTGATGTGCTTAAAAGTGAAGCACGA
GTACTTGCAGTGCACGCACTGCAATGCACTGCTATGTATAGCAGCACTTT
GTATGTGTTGTCGCAGTGTACTGCTTACTGGCAAGTTCGGCCGGACCAAA
TGGTGGTAGCAGAACATATGCAATTTGTGGCAAGTGTACCCCCCCCCCCC
AAAAAAAAAAATCCTCCTCCCTACTGAACTCCTCCGACCACATCCTCGCT
CGCTTGCTGTGCTGCTGCACCTGCCTTCCCTGCCCTCCCCCCTTTGCTCC
CTCCCCCCCTCCCTCCCTCCCTGCCTCCCTCTCTTGCTCAACCAACCTCT
GCTGTCTGTCGCACTGTCCCTCGGCGGCGGCGGCAGCGACCCTAACTCAT
TTGTTCAGGGGGACATGCGCAAAGCGGCCATGCGGCTACACACGCGCGAC
CAGGCCCCCCGCGAGGGGGAGCAGGAGAACCGGGGGAAGAAGTTCTCCGA
GTGGGCACCCACCAGGTAACTTGCCCAAAGTACATATGTACTGTACGGCA
CTCTACTGTGATGTACTGTACGGTATTGTACTTGCTAACCTACTAGCTCC
CAGGGCAAACTGACCAGTTTGTGTTACAGCGCAGCCAAGTACATATAGCC
TCTCATGTGTGTGAGTGCATACAGCATCTGCTCCGTCTCGGTCGAGTTGC
GTGGTCAATGGTATTACCTATGCCCTTGGAACCGCGACAGGCACAAGGTG
AATACCGTATATGGCGGAAGATAGCGACCCGGCTTTAGATAGCACTCCCC
TCTGAGAAAACAACCCTGGTCGCTAAAATTTCCACCTGGCAAACGTATCG
ACCGGGGCTACGAAAGATAACATCCCTGCGTCACCCAGCCTGGGCCATGA
AACTTGCTCGGGTGCCTGAGATTAGGAGGGCCCAGCATGAGTGCGCCAGG
CAAATTTGAACGTGCCAGCATATCGTGTGACTACTCCATTGACTGATGGG
ACCTGGCTTGGTGTAACTTACCGGCGCGATATCCAAATCACAGGAACTGT
AAACTGTGATGTGATGTCAAACTACAGTAGGTAATTCAAAGTACTGTATA
GCGCATTGCAGTACACATCACATGGTTCAGCTTGCCACAGGTATTTAACG
CACACTGCAGTCCAGGGGAGGGAGGGAGAGTGCTCCGTCTTGAACGGCGC
GTGGTAAATGGTCTCAGGACTGCAGCAAGCACAACGCGTGTACATATATA
TATGTATATACCACAGAAGGTCCTCGAGTACATGCAGAGGCTAACTTACG
GCGTGCTGCAGTATTTAGTTCAGGCAGGTTTCCCGCAACTACTGTACTGT
AGCCGAAGCCCCCGGCAAGCCATCCACAACAGCAGCTCATTTGCCCTTCC
CCCCCACACACCCCCGCCGCCCCCGGGCAGGCCCGGGTACCTGCAGTTCC
TCGTGGACTCCCGCGCCGTCTACGCCGCGCTCGAGGAAGCCGTGAACGCC
AGCCCGGCCCTGGAAACCCTGAGGGACACGGGGCTCGAGCGCGTGGCCGC
GCTCGACGAGGACATTGCGTGGCTGCTCGTCGCGTACCCGGAGGATTTCC
AAGGCGGGGTCGCGCCGGAGGCGTCCGCGACGGGGAAGGAATACGCGGAG
TTCCTCTCGCGGACGGCGCGCGAGAGCCCCGCCGCCTTTGTGTGCCACTT
CTATAACCACTACTTTGCGCACACGGCGGGGGGCATCATGATCGGGCGCA
AGGTGGCAGACGCGTGCCTGGGTGGGCGGACGCTGGAGTTCTACAAGTGG
GGGGAGGGCGGGGGGGGCGACGTGCGCGCGCTGCTGGAGGCGGTGCGCGA
GCGGATTGACGCCATGGCGGCAGGCTGGGGCCCGGAGGAGCGCGAGGCGT
GCCTGGAGGAGACGGGCAGGTCTTTCGCCTTTGGCGGGCGCCTCCTGTCC
AGCATATCCTCATGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:1595892..1600306-

>mRNA_S-ischiensis_contig8.19462.1 ID=mRNA_S-ischiensis_contig8.19462.1|Name=mRNA_S-ischiensis_contig8.19462.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1998bp|location=Sequence derived from alignment at S-ischiensis_contig8:1595892..1600306- (Schizocladia ischiensis KU_0333)
ATGAGGTCAAATGTGCTATTCTTGGTGGGGGGGGTGCTGCTCACAGCTGA
AGACAGCAGGGCATTCCAGCTGGGCGGGGCGCTCATCGTGAGGGCATTCC
AGAGGCCACTGTCGACAGGGCGACGGGCCGGCGGCGCTCTGCACCCCCAT
TCCAGATGGGTCTTCGAACCACGATGAGGTCAAATGTGCTATTCTTGGTG
GGGGGGGTGCTGCTCACAGCTGAAGACAGCAGGGCATTCCAGCTGGGCGG
GGCGCTCATCGTGAGGGCATTCCAGAGGCCACTGTCGACAGGGCGACGGG
CCGGCGGCGCTCTGCACCCCCATTCCAGATGGGTCTTCGAACCACGGACT
CGACGGGCGGCAGCTGCTCGGCCATGCGCGGTGCCCGCGTCCATGTGCGC
AACGTCGCCGTCATCATCAAAGAGCGAGGTTGACGTGGCGGAGCCCGCAG
AGGGCAAGACGGCCCGAGTTTCCGGGAAGGGGCACGGGCACGGCGGAATG
TCAAAAGCGACTCGACGGGCGGCAGCTGCTCGGCCATGCGCGGTGCCCGC
GTCCATGTGCGCAACGTCGCCGTCATCATCAAAGAGCGAGGTTGACGTGG
CGGAGCCCGCAGAGGGCAAGACGGCCCGAGTTTCCGGGAAGGGGCACGGG
CACGGCGGAATGTCAAAAGCCGACCCTAACTCATTTGTTCAGGGGGACAT
GCGCAAAGCGGCCATGCGGCTACACACGCGCGACCAGGCCCCCCGCGAGG
GGGAGCAGGAGAACCGGGGGAAGAAGTTCTCCGAGTGGGCACCCACCAGC
GACCCTAACTCATTTGTTCAGGGGGACATGCGCAAAGCGGCCATGCGGCT
ACACACGCGCGACCAGGCCCCCCGCGAGGGGGAGCAGGAGAACCGGGGGA
AGAAGTTCTCCGAGTGGGCACCCACCAGGCCCGGGTACCTGCAGTTCCTC
GTGGACTCCCGCGCCGTCTACGCCGCGCTCGAGGAAGCCGTGAACGCCAG
CCCGGCCCTGGAAACCCTGAGGGACACGGGGCTCGAGCGCGTGGCCGCGC
TCGACGAGGACATTGCGTGGCTGCTCGTCGCGTACCCGGAGGATTTCCAA
GGCGGGGTCGCGCCGGAGGCGTCCGCGACGGGGAAGGAATACGCGGAGTT
CCTCTCGCGGACGGCGCGCGAGAGCCCCGCCGCCTTTGTGTGCCACTTCT
ATAACCACTACTTTGCGCACACGGCGGGGGGCATCATGATCGGGCGCAAG
GTGGCAGACGCGTGCCTGGGTGGGCGGACGCTGGAGTTCTACAAGTGGGG
GGAGGGCGGGGGGGGCGACGTGCGCGCGCTGCTGGAGGCGGTGCGCGAGC
GGATTGACGCCATGGCGGCAGGCTGGGGCCCGGAGGAGCGCGAGGCGTGC
CTGGAGGAGACGGGCAGGTCTTTCGCCTTTGGCGGGCGCCTCCTGTCCAG
CATATCCTCATGAGCCCGGGTACCTGCAGTTCCTCGTGGACTCCCGCGCC
GTCTACGCCGCGCTCGAGGAAGCCGTGAACGCCAGCCCGGCCCTGGAAAC
CCTGAGGGACACGGGGCTCGAGCGCGTGGCCGCGCTCGACGAGGACATTG
CGTGGCTGCTCGTCGCGTACCCGGAGGATTTCCAAGGCGGGGTCGCGCCG
GAGGCGTCCGCGACGGGGAAGGAATACGCGGAGTTCCTCTCGCGGACGGC
GCGCGAGAGCCCCGCCGCCTTTGTGTGCCACTTCTATAACCACTACTTTG
CGCACACGGCGGGGGGCATCATGATCGGGCGCAAGGTGGCAGACGCGTGC
CTGGGTGGGCGGACGCTGGAGTTCTACAAGTGGGGGGAGGGCGGGGGGGG
CGACGTGCGCGCGCTGCTGGAGGCGGTGCGCGAGCGGATTGACGCCATGG
CGGCAGGCTGGGGCCCGGAGGAGCGCGAGGCGTGCCTGGAGGAGACGGGC
AGGTCTTTCGCCTTTGGCGGGCGCCTCCTGTCCAGCATATCCTCATGA
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