mRNA_S-ischiensis_contig8.19412.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19412.1
Unique NamemRNA_S-ischiensis_contig8.19412.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: D7FY33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY33_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 1.130e-103
Identity = 151/204 (74.02%), Postives = 180/204 (88.24%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSIL+YNGAAI AM GK+CVGI +D+RLG Q QTVATDF+K+FKM DKLMVGLPGLATDV+T+++LLTFRLN+YRLREEREIKP+TF+AL+SH+LY++RFGPYFVEP+V GL +   P+++ FDLIG+ V T D+VV GTCTNNL+GMCE+ +R DMDKDELFETM QCLL +VDRDALSGWGGVVHIITPEGI SK L+ R D
Sbjct:    1 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKEDNTPFISAFDLIGAPVVTDDFVVGGTCTNNLYGMCESFYRPDMDKDELFETMAQCLLTSVDRDALSGWGGVVHIITPEGIMSKTLKGRQD 204
[Close]
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA)

HSP 1 Score: 307 bits (787), Expect = 5.610e-97
Identity = 144/204 (70.59%), Postives = 176/204 (86.27%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSIL+YNGAAI AMAGKDCVGIAADTRLGVQ QTVATDF+KVFKMND+L  GL GLA+DV T+ QLL FR N+Y LREERE+ P+ F+ L+S +LYE+RFGPYFVEP+V GL +KGKP+L+G DLIG+ V T D+VV+GTCT N++GMCETL++ DM+ D+LFET+ Q LLA+VDRDALSGWGGVVHIIT +G+TS++L+ R D
Sbjct:    1 MSILEYNGAAIIAMAGKDCVGIAADTRLGVQAQTVATDFKKVFKMNDRLFCGLAGLASDVQTLDQLLKFRQNLYELREEREMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDMEPDQLFETLAQALLASVDRDALSGWGGVVHIITKDGVTSRELKGRQD 204
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BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A7S2FDP8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDP8_9STRA)

HSP 1 Score: 305 bits (781), Expect = 1.230e-95
Identity = 140/205 (68.29%), Postives = 178/205 (86.83%), Query Frame = 3 
Query:   78 TMSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            TMSIL+YNG AI AM GK+CV IA DTRLG+Q QTV+ DFQK+FKMNDKLM+G+ GLATDV+T+QQLL F+LNMY+LREERE+KP+TF+ L++ +LYE+RFGPYF EPVV GL +K +P+L+  DLIG+ V T+D+VV+GTCT NL+GMCET++R DM+ D+LFET+ QCLLA+VDRDALSGWG +VH+ITPEG TS++L+ R D
Sbjct:   30 TMSILEYNGGAIIAMTGKNCVAIACDTRLGLQQQTVSCDFQKIFKMNDKLMLGVTGLATDVLTLQQLLKFKLNMYKLREEREMKPETFSWLLTSVLYEKRFGPYFTEPVVAGLNEKNEPFLSAMDLIGAPVMTKDFVVSGTCTANLNGMCETMYRPDMEPDDLFETISQCLLASVDRDALSGWGAMVHVITPEGTTSRRLKGRQD 234
[Close]
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A835ZI80_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI80_9STRA)

HSP 1 Score: 303 bits (775), Expect = 3.390e-95
Identity = 142/204 (69.61%), Postives = 173/204 (84.80%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSIL YNG  I AM GK CVGIA+DTRLG Q QTVA DFQK+F+M D++M+GL GLATDV T+QQLLTF++NMY+LREER++KP+TF+AL+S  LYERRFGPYF EPVV GL + GKP+L+  DLIG+ V T D+VVAGT T NL+GMCETL+R DM+++ELFET+ Q LLA+VDRDALSGWGGVVHII P G+T+K+L+CR D
Sbjct:    1 MSILSYNGGDIIAMTGKGCVGIASDTRLGNQAQTVACDFQKIFRMTDRIMLGLTGLATDVQTLQQLLTFKINMYKLREERDMKPKTFSALLSTTLYERRFGPYFTEPVVAGLDEDGKPFLSAMDLIGAPVFTDDFVVAGTSTENLYGMCETLYRPDMNEEELFETLSQALLASVDRDALSGWGGVVHIIGPNGVTTKQLKCRQD 204
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BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A6U4EA60_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EA60_9STRA)

HSP 1 Score: 299 bits (766), Expect = 7.340e-94
Identity = 139/204 (68.14%), Postives = 170/204 (83.33%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSIL+YNG A+ AM GKDCVGIAADTRLG Q QT+ATDF+KVF++ND+L VGL GL TDV T++ LL FRLN+Y+LREEREI P+ F+A++S +LYE+RFGPYFVEP+V GL   G  +L+  DLIG+ V T D+VV GTCTNNL+GMCE+L+R DMDKDELFET+ QCL A+VDRDA+SGWGG VH+ITPEG+ SK L+ R D
Sbjct:    1 MSILEYNGGAMIAMVGKDCVGIAADTRLGAQAQTIATDFKKVFQLNDRLFVGLAGLGTDVQTLRNLLKFRLNLYKLREEREITPKAFSAMLSSILYEKRFGPYFVEPMVCGLNADGSAFLSAMDLIGAPVFTDDFVVQGTCTNNLYGMCESLYRPDMDKDELFETLAQCLQASVDRDAVSGWGGEVHVITPEGVYSKTLKSRQD 204
[Close]
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A6U1HBX0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1HBX0_9STRA)

HSP 1 Score: 298 bits (763), Expect = 2.040e-93
Identity = 142/204 (69.61%), Postives = 170/204 (83.33%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSIL +NGAAI  MAGK+CV IAADTR G+Q QTVA DF+KVFKM+D++ VGL GLATDV T++  L F+L +Y LREER +KP+ F+AL+SHMLYE+RFGPYFVEPVV GL D G P+L G DLIG+ V T DYVV+GTCT NL+GMCE+++R DM  DELFET+ QCLLA+VDRDALSGWG VVH+ITP+GITSK L+ RMD
Sbjct:    1 MSILQHNGAAIICMAGKNCVAIAADTRFGLQQQTVACDFEKVFKMSDRMFVGLAGLATDVQTLRNTLKFKLALYELREERVMKPEAFSALLSHMLYEKRFGPYFVEPVVCGLKDDGSPFLCGMDLIGAPVYTDDYVVSGTCTPNLNGMCESMWRPDMAPDELFETISQCLLASVDRDALSGWGAVVHVITPQGITSKSLKGRMD 204
[Close]
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A6U6IRL2_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A6U6IRL2_9STRA)

HSP 1 Score: 298 bits (762), Expect = 2.880e-93
Identity = 139/204 (68.14%), Postives = 173/204 (84.80%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSIL+YNGAAI AMAGK CVGIA+DTRLG+Q QTVATDF+KVFKMND+L VGL GLATDV T+ QLL FR N+Y LREER++ P+  + L+S++LYE+RFGPYF+EPVV GL + GKP+L+G DLIG+ V T D+VV+GT T NL+GMCETL++ DM+ D+LFET+ Q LLA+VDRDALSGWGGVVHIIT +G+ S++L+ R D
Sbjct:    1 MSILEYNGAAIIAMAGKGCVGIASDTRLGIQAQTVATDFRKVFKMNDRLFVGLAGLATDVQTMDQLLRFRQNLYELREERQMSPRVMSNLLSNLLYEKRFGPYFIEPVVAGLDENGKPFLSGMDLIGAPVYTDDFVVSGTATGNLYGMCETLYKPDMEADQLFETLAQALLASVDRDALSGWGGVVHIITKDGVMSRELKGRQD 204
[Close]
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A6U1MII2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MII2_9STRA)

HSP 1 Score: 297 bits (761), Expect = 4.050e-93
Identity = 137/204 (67.16%), Postives = 171/204 (83.82%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSI++YNG A  AMAGK+CVGI +D RLG+Q QTVATDF KVFKMND+L +GL GLATD+ T+QQLL FRLNMY+L+EERE++P+ F+A++S +LYE+RFGPYFVEP++ GL D   P+L+  DLIG   +T D+VVAGTCT NL+GMCE+L+R D   DELFET+ QCLL++VDRDA+SGWG VVHIITP+GITSK L+ RMD
Sbjct:    1 MSIMEYNGGACIAMAGKNCVGICSDLRLGMQAQTVATDFPKVFKMNDRLFLGLTGLATDIQTMQQLLKFRLNMYKLKEEREMRPEVFSAMMSSVLYEKRFGPYFVEPIIAGLKDDNTPFLSTMDLIGCESKTDDFVVAGTCTPNLYGMCESLYRPDQGPDELFETLSQCLLSSVDRDAVSGWGAVVHIITPDGITSKMLKGRMD 204
[Close]
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A485L233_9STRA (Proteasome subunit beta n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L233_9STRA)

HSP 1 Score: 296 bits (759), Expect = 8.010e-93
Identity = 136/204 (66.67%), Postives = 175/204 (85.78%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSIL YNGAAI AMAGKDCV IA+DTRLGVQGQT+ATDFQKVF++N+K  VGL GLATDV +V QLL F+LNMY++REER+IK +T ++++S+M+YE+RFGP+FVEP+V GLTD  KP+L+G D +GS V T+DYV AGT  + LHGMCE+LF+ DM+ ++LFET+ QCLL+A +RDA+SGWGGVVHI+TP+G+T+K L+ R D
Sbjct:    1 MSILAYNGAAIIAMAGKDCVAIASDTRLGVQGQTIATDFQKVFRLNNKAFVGLSGLATDVQSVSQLLRFKLNMYKMREERDIKVKTLSSMISNMMYEKRFGPWFVEPIVAGLTDDNKPFLSGMDCLGSEVFTKDYVCAGTMDDALHGMCESLFKPDMEPEDLFETISQCLLSACNRDAMSGWGGVVHILTPQGVTTKVLKTRKD 204
[Close]
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Match: A0A7S1FMY7_9STRA (Proteasome subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMY7_9STRA)

HSP 1 Score: 296 bits (759), Expect = 8.010e-93
Identity = 138/204 (67.65%), Postives = 172/204 (84.31%), Query Frame = 3 
Query:   81 MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLMVGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRFGPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCETLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLRCRMD 692
            MSIL+YNG AI AMAGKDCV IA+DTRLG+  QTVATDF+KVFKMN++L VGL GLATDV T+ QLL FR  +Y LREER++KP+TF+ L+S MLYE+RFGPYF EPVV GL +K KP+L+G DLIG++V   D+VV GTCT NL+GMCETL++ D+  +ELFET+ QCLL+AVDRDA+SGWG VVH+ITP+G+TS++L+ R D
Sbjct:    1 MSILEYNGGAIIAMAGKDCVAIASDTRLGINMQTVATDFKKVFKMNERLYVGLAGLATDVQTLDQLLRFRSELYELREERKMKPKTFSNLLSTMLYEKRFGPYFCEPVVAGLDEKNKPFLSGMDLIGATVIADDFVVTGTCTENLYGMCETLYKPDLGPEELFETISQCLLSAVDRDAMSGWGAVVHVITPKGVTSRELKGRQD 204
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY33_ECTSI1.130e-10374.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XNS4_9STRA5.610e-9770.59Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2FDP8_9STRA1.230e-9568.29Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
A0A835ZI80_9STRA3.390e-9569.61Nucleophile aminohydrolase n=1 Tax=Tribonema minus... [more]
A0A6U4EA60_9STRA7.340e-9468.14Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U1HBX0_9STRA2.040e-9369.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U6IRL2_9STRA2.880e-9368.14Hypothetical protein n=2 Tax=Mediophyceae TaxID=58... [more]
A0A6U1MII2_9STRA4.050e-9367.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A485L233_9STRA8.010e-9366.67Proteasome subunit beta n=1 Tax=Aphanomyces stella... [more]
A0A7S1FMY7_9STRA8.010e-9367.65Proteasome subunit beta n=2 Tax=Corethron hystrix ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1257359..1265013 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.9
Seed ortholog evalue1.4e-86
Seed eggNOG ortholog2880.D7FY33
Preferred namePBC1
KEGG koko:K02735,ko:K03660
KEGG Pathwayko03050,ko03410,map03050,map03410
KEGG ModuleM00337,M00340
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0016020,GO:0019538,GO:0019774,GO:0031090,GO:0032991,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0098588,GO:0098805,GO:1901564,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0180@2759
EC3.4.25.1,4.2.99.18
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-27_006930.1
Exons5
Model size2198
Cds size615
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817279.3832579-UTR-S-ischiensis_contig8:1257358..12574381622817279.3832579-UTR-S-ischiensis_contig8:1257358..1257438Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 1257359..1257438 +
1695740990.9536614-UTR-S-ischiensis_contig8:1257358..12574381695740990.9536614-UTR-S-ischiensis_contig8:1257358..1257438Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 1257359..1257438 +
1622817279.4578815-UTR-S-ischiensis_contig8:1263510..12650131622817279.4578815-UTR-S-ischiensis_contig8:1263510..1265013Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 1263511..1265013 +
1695740991.0370321-UTR-S-ischiensis_contig8:1263510..12650131695740991.0370321-UTR-S-ischiensis_contig8:1263510..1265013Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 1263511..1265013 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817279.3961904-CDS-S-ischiensis_contig8:1257438..12574411622817279.3961904-CDS-S-ischiensis_contig8:1257438..1257441Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1257439..1257441 +
1695740990.96855-CDS-S-ischiensis_contig8:1257438..12574411695740990.96855-CDS-S-ischiensis_contig8:1257438..1257441Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1257439..1257441 +
1622817279.4100428-CDS-S-ischiensis_contig8:1257671..12578181622817279.4100428-CDS-S-ischiensis_contig8:1257671..1257818Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1257672..1257818 +
1695740990.9796877-CDS-S-ischiensis_contig8:1257671..12578181695740990.9796877-CDS-S-ischiensis_contig8:1257671..1257818Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1257672..1257818 +
1622817279.4234905-CDS-S-ischiensis_contig8:1260303..12604491622817279.4234905-CDS-S-ischiensis_contig8:1260303..1260449Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1260304..1260449 +
1695740990.991034-CDS-S-ischiensis_contig8:1260303..12604491695740990.991034-CDS-S-ischiensis_contig8:1260303..1260449Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1260304..1260449 +
1622817279.4349911-CDS-S-ischiensis_contig8:1262553..12627281622817279.4349911-CDS-S-ischiensis_contig8:1262553..1262728Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1262554..1262728 +
1695740991.0051732-CDS-S-ischiensis_contig8:1262553..12627281695740991.0051732-CDS-S-ischiensis_contig8:1262553..1262728Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1262554..1262728 +
1622817279.4454443-CDS-S-ischiensis_contig8:1263366..12635101622817279.4454443-CDS-S-ischiensis_contig8:1263366..1263510Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1263367..1263510 +
1695740991.0258386-CDS-S-ischiensis_contig8:1263366..12635101695740991.0258386-CDS-S-ischiensis_contig8:1263366..1263510Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 1263367..1263510 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19412.1prot_S-ischiensis_contig8.19412.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 1257439..1263510 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19412.1

>prot_S-ischiensis_contig8.19412.1 ID=prot_S-ischiensis_contig8.19412.1|Name=mRNA_S-ischiensis_contig8.19412.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=205bp
MSILDYNGAAIFAMAGKDCVGIAADTRLGVQGQTVATDFQKVFKMNDKLM
VGLPGLATDVMTVQQLLTFRLNMYRLREEREIKPQTFAALVSHMLYERRF
GPYFVEPVVVGLTDKGKPYLTGFDLIGSSVETQDYVVAGTCTNNLHGMCE
TLFRKDMDKDELFETMGQCLLAAVDRDALSGWGGVVHIITPEGITSKKLR
CRMD*
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mRNA from alignment at S-ischiensis_contig8:1257359..1265013+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19412.1 ID=mRNA_S-ischiensis_contig8.19412.1|Name=mRNA_S-ischiensis_contig8.19412.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7655bp|location=Sequence derived from alignment at S-ischiensis_contig8:1257359..1265013+ (Schizocladia ischiensis KU_0333)
GTCTGTGGGTAGCGGGCGACTGCAGAGCGCGGCGAATGCGAGGAGGAGCC
CTTACAATCCGCGGACGGTGATTTCAGACCATGGTGAGGTCACGTTAACA
TGTCGGGACGCGCTCGCAGTGATGTCGCTTGGTCATAGGGCGGGGCGACC
GCCTTTGCACGCTTGCGCGAGTGGATTGCACGCAAATCCAGCCCCGCCCG
AGGTTGGCGGGCCGAGCATTGCTTCCGCACGAGTTACGAGCGCTGCTTCC
GGTGCACGCACACACCTTGCTTCCGGTGCACGCACACACCTTGCCACCGC
CGGATATGCACAGTCCATCTTGGATTACAATGGGGCCGCTATCTTCGCCA
TGGCGGGGAAGGATTGCGTGGGGATCGCGGCGGACACAAGGCTCGGCGTG
CAGGGGCAAACCGTGGCAACAGACTTCCAGAAGGTCTTCAAAATGAACGA
TAAGCTCATGGTGGGTTCACAGGCAGTGGAAGGGCATGGCTGTCCATTTA
GCTCGGTACCACATTAGTCCGTGGCTAAATAGCTACTCCTGCCGCAGGGC
AAACCAGAAGTTTCGACGTAGGGCTGTTGGCATGGCACGCAAGGTTATGT
CACAAGACAAGCCAATGGGTACGTATACCACAACCATAGTAACCCTGGTG
ACAACCCGGGGTCGGGTATGTCTCTGCAGGCCACTTCAGGGTGGCCTGGG
GGGGGGTCTCATTTCCTGGATGACGACATGCCTTGGTACAATGGGTGGGA
AACGGCGAGAACAGGGGCAATCGGCCCGAATGCTTCAGAGCCAGTGAAAC
GAGGGCACTACACATTACGAGTGTATATATATATGGACTCGTTGGCTTGT
CTTGTAGCGGAACCTTGCGTGCTTGGCCGACAGCCCTAGCTTAAGAATTC
AGGTTTTGTCCTCTGACAGGACTCGCTATTTAGCATTGACTCTCGTATCC
CGGCCGAGCCGGTACTTGGTGAATATCTGTAGTCAACCTCACTTTGGCTT
TTGCCAGCGCGGCATCGAACCGCTTGCTTAGTGAAGAGGGTTGTGTAGCG
TCGTAGGTTTATTGGCCCATTGTGGGGTTTTTGCATCATCATGGCGCGGC
GATGGCCCCTCCCTCGTGCCCGGGGCGGGATGGAGATTGCTACGCCCTCA
GCGGCGCGTGGTCAATGGTCTCTGGACTACGGCGAGCACAACGTGATGCG
TACTGGGTAAACAAACAATGGCGACATCGGCTTCCTGCGCCCAACTTCAA
AGACAGAGTCGTGCACGCAAGTCTACTGCTGTAGAAACCTGACAGCAAGG
CCCGTACCTGTGCCACGCCCCGCGCACCAAGTTACCGCGGTGGTTTGTGT
GCGCGTATTTGTGTCGTTTGTTTTGCACCCCGCTGGCCCGCATGCCCAGC
AGTTTGACTTCGTGCGGAGCGGGGCGTGGTTTTACTAGGGTTGATTTCGC
GACAACCCTTGCCATGTCCTTGCGTTTGTTCGTGGTTCGTGCCCTCCAAT
GTCCACACCATTATCCGTTTCGGTTTCTTTCTTTTTAACCGGTTTGCGGC
ACGCGGCACCCTGGCCCACCTGGGCATTGTTCGGCACGAGGATCAGACCT
ATTGTTTTTCCATTTGACCCTTCGTGTATCAGTCGACTACCGGATAAATC
TATGGCGAGGTATCTACGTTGTACGTGGCGTTTGCCCCGCCGGTCCCTTG
CTTGGTCCCCATGCGTTCCCCCGACCTCGGGCAGCTCGTGCGGTCAACGG
CCGCGGGACTATGGGGAGACTGCCGCGAAGTACAGTACGAGCACAGTACA
GTACAGACATGTTTCTCATGTTTCTCAAGGAGTATTTCGTGACCGTTCGG
TAGAAGCCATTTCGTGCCCGACCGGGAAGCGAGGGGGGGGGAACCATCAT
ACCAGGTGGGCCCGCCGGGGTCATGGCACGGCCGGCCTGGCCCGCGCTTG
TCCCTGTGGTATGGCTGGCAATGAAATCAGGCAGTGCTGTTTCCCTGGAG
CCTGTGGCAATCAAATCAGGCATTGCTGGTTTCCTCGAGCCTGCCCGGCT
GTCGCCCGGTCGGTGCGTCTCGCGGGCAGATCCCACGCTTTGTGCCTGGC
AAAGACGTGCAACTGTACTCGGAAGTATACATACTTTGAAGCATATATGT
ACCCACGTCGTGCTTGCCGTAGTCCCGAGACCATTGACCACGCGCCTCGG
TCGAGACGGAGCAGTATATACGAGTAGAGTGCTTTGACGAATGTAGGTGT
CCTCGCGTCCAACAGAGGTTGTCTCACTGCCAGTTGCACGCGCCTTTAAC
CCTTCCCAGAATGCGCCTGGAAGCGCAAGCACGTTTTCCCGCGTGGGTTC
AGGGAGCGTCGGCCGGTGCCAAGGCCGGCGTCGTTGTGCTTTAGCCTTTG
CCTAGGGCCGCCGGGCCGTGACGACCTGGGTGTTGTACCGTGACGCGGTT
GGCCTGCAGTCCAGTGGGTGCAATGCCGGGCCGCTGCCCGGAGGCAAGAA
CACACGCACTGTCGATGATAGACCTCGAAAGGTGTATGAATGACTACACA
CCCGTTTTACTCCGGATCGGGGAAGAGCGCGCTTGGTCAACCTTCTTTAA
GCTACGGCAAGTGCACCATGAGTACGCCCAGTACTTTGGTTTCCTCGTCC
TTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCCTCTCCCCCTCCCTTGAAGCATATAAGTACCTGCACTCTGACG
TACTTCAGCATAAATGTACTCGTACTTACTTCCAAGTACGAGTACGCCTC
TATCAGCCCGAGCGAACGTTTCGCTCAAACGAACGGGGACCGGGTTTGTG
TAGCACGCACGCGCTCATCCGGCCGGCACTGACTATGGCTACTTGCTGAC
ACGCGCGCGCACCCACGAATGCAACCCCCGCGCCCCCGCCCCCAGGTGGG
GTTGCCGGGGCTGGCTACAGACGTGATGACCGTGCAGCAGCTGCTCACCT
TCCGCCTGAACATGTACCGCCTGCGCGAGGAGCGCGAGATCAAGCCGCAG
ACCTTTGCGGCGCTCGTGTCGCACATGCTGTACGAACGGAGGTGGGTGGT
GGTGGTGGTGGTGGTGGTGGTGGTTTTGTGGAGAAAGAGATGGGCGTTCG
AGGCACGGCGGGGGGTGCGTTCTATGTAGGTGCGCGCGGTCGATGGCCGT
CTTGGGACGAAGAGCCAGCAAGCTCAGCGTCAAGCGAGTAGCTTACTGAG
TACTCCAGTGCCTTCTTGGGAGCGTGTGAATGGGTTGCTCCGTCTATAGT
CAGTCGAGGCGCACGGTCAATGGTCTTCTCCCTCGGCATGCGCAACGTGA
GTTCATGTGCTCGAGTACGAGTACTCGTATGTAAGCTATGTACGCCGACT
ATGCGACGAGTGTGTGGGACGGGAGCAAGGTTGCTCCGGCCGCGGCAGAG
GCCACGTGCGCGGGCGATTGGTCTCGGGGCTGCTACGGGCCCTCCTCCTG
CTCCTCTCCACCTCCTGCTCACCTCCGCCGCCCCAGTTCCTTTTCCTTCC
CCCTTGGGTTTGCCTTCTGCTCTGCGGGAAAGGGCGACCCGCTGTTGAGG
TTGGTTGTGATGTGATGCGATGTGATGTGAAACCACTGAGTTGTAGAGTG
CTCATCACATCACATGGGTGCCGCTATGGAGGCCACGAGCAGCGTGGAGA
CTGCACCTCGCTTGAGATTTATTTTGTACTCGAGTAGCACGAAATGCTAC
GGCGAGCACACCGTGAGTGTATGTGTGTGCGTGTGTGTGCGTGTGCGTGT
GTGTACTCGTTGGCTTGTCTTGCGACATACTTCAAAGTACCTAGCCGTGC
GCGCGTGCGTAGTTGACAGCCCAAAGTTAATCTTTGGAAGCACGCCGTGA
GTACCAATACATGTAAAATGCCGGTACTTAAGAGCCGAGCGAGGTGCCCA
CCAGGTCCCACCGTGGCTGTCGAAGGGATTCTCCGTCTGTTTGGGTGCGT
GGAGGCGTTGCCACCAAGCTGCCGTCTTGCGTCGGAGTGGTTCTGCACCC
CCCTGTGGGAGGTCCAACATTTGATTCGGAAAGGCCTTTTTTTAACCCCA
CACAATCATCCAGTCCATTGAGCGTTCGCTTTCTTGGCAGGCAACAGTAG
TCCCGGGGATTCTTTTCTTGGGGGGGCTTCACGCCGTTTCTGCGGTGTGT
GTGTGTGTGTGTGTGTGCGCGCGCGTGTGTGCATGCATGTGTTGCCCTCT
CTGGCTTTTTCGTGGCTTGCTGTTTGTCCCGCTTTCTGTCTGTCCGCCTG
CAAGGCCACTTTGCCAGAGCTGCAAAGGCGCCTGCCCGACCCACATGCGA
GCTCTCTCGCGGTGGCCAGCGCTGCACAAAGATGCTGCCCCCCCCGCCCG
CCCCGCCCTGCCCTGCCAGCTGTGTGGCAGGGCTGTGCGGTCAGGCTCTG
CCCTTGATGCTTACGGGCAAGCACAGTGTGCATGCGTGCTGTATGTGTAT
CGAAGCATTGACCAAGCGCGCGCTGCCCCGTCTTCGAGAAACGAAATGAT
GTGATGTGATGTCAAACTACAGTACAGTACTTCAGAGTACACATAACATA
ACATAACATCACATCGCATCGCATCGTATCGCATCGTATCGCATCACATC
GCATGCTGCTCCGTCTTGGTCGAGGCGCGTGGTCACTGGTCTCGGGACTA
CAGCAAGCACAACATGTGTATTCGTACTCGAGTACATACTTGGCGCTACT
CTTCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCC
TCCCCCTCCCCTCCCGCACACGCCCCTTCCCCGTGAGCCAACTGAGGAAG
GGTCACTGTTGATATATTTTGTGACGTGGCCCGCACCTTGCCTTGTGTTG
TTTGTTTGTTGATTTCTCTATGCCTGCCGTAGTCCTGAGACCATTGACCA
CAATAGCACTGTTGACGGCGTAGTATGAGGTATATACATACGTCCGTACT
TTGTATTTCCATGCTCCTGCCAGAGCCTACTTGTAGAGACACAGTGCTGC
CTGGGACCTCTCCCGAGAGAGGAGCGCTGTGCAGCATCTCCCAACAGTGC
TCCATGGACATAAAACGGGCACCGTGTGCTGACGCCCCACATCGGATCGG
ATCGGATGGAATGGAATCGAAATTGAATCGAATTTGCTATCGCAGATTCG
GGCCGTACTTTGTGGAGCCGGTGGTGGTGGGGCTGACGGACAAGGGCAAG
CCCTACTTGACGGGCTTCGACCTCATCGGGTCGTCGGTCGAGACGCAGGA
CTACGTGGTTGCAGGGACGTGCACAAACAACCTCCACGGCATGTGCGAAA
CTCTCTTCCGCAAAGACATGGTGAGAGGGAGAGGGAGAGAAAATAGGGGG
GGTGGGGGGGAAGGGCAGTGTGAGAGAAGGAGGGAGGGAACGATCGAGAG
GGAGAGAGAGAGAGAGAAAGAATAGAGGAGCCTCGGCGAGGAACCGCCTT
CGCAGGGGTGCGGCGGTGGCGGTGGCGGCGGCAGCAGTGATGGTGGCGAG
CGAGCGGGTTACTCAGTGCTACAGTAGTAGTTGGTTGCCTTGCTATAAGT
AGCTGTGTGACCATTGACCACACATCCCACTAGGGGGGCCCCATGGGATG
GGGCACTGTCTGTTCTGTCGTCGGGAGGACCCCTCCATTCTTTGTTACCG
CAGGCAACGGCCGGGGGGGGGGGGGCAGGGTTTAGGAAAGGTGTATTTGC
GGCGGCGCCTTCATGCCCCGCTTCTACTGTACTCGAGTGCACTGATAAGG
CTCTGGGCATGCTCGCCCGACCATGGACAAAGCTTTGTGCTTGCTTCGGT
AGTTCGCCTGCCGAGGAGACTGTACTCTTGGAAGCGTTGACTGACCCGTG
CGCTTTCCCCACATCCTCCGGCTGCCCCCCCCCCCGCTCCTCTCTCTCAC
CGTGGGCCACGATTGAAACCATATACCTACCGACGACGTGGCCGCCCGCG
TGCTGCAGGACAAGGACGAGTTGTTTGAGACCATGGGACAGTGCCTGCTG
GCGGCCGTGGACCGAGACGCCCTGAGTGGCTGGGGAGGCGTTGTCCATAT
CATCACGCCGGAGGGGATCACCTCCAAAAAGCTCCGCTGCCGCATGGACT
GAGGGAGCCCGCCGGCCACTGCGTGTCTGCTTACATAAATAGTGAACTCT
GCGCCGGCCGCACCTGCATGCCCCGAGCGTGTGTCCACTTGCGCCTCTCT
ACGAGCTGCTAACTTGCTACTACTGTAGTAAGTACACACTCGTAGAGGTT
GTGCTCTCCCGTGTTTCACATGCTGGGAAAGACAGCTGTACAGCAGGTTG
AGCGAATGGGGAGGAGGGGCAGCGGGAGGAGGAGGAGGAGGGCAAGGTAA
CGGGAGCACTGGGGGGGGCTGGAGGCTGGAGCCCCGCCCCTGGGGGGGGA
GAGACCCGCCGCCTCTTCCAGCCTGGAGTACAGCACAGTACAGTACCTTT
TGATTAGTTTCCACCTGACATGGTGCAGGGGTTGAGTCTTCAATGGAGTA
CAGTACAGTGCAGGCAGACAGGCGGATTGGCACGTCAGTTGGCCAGCCTT
CTGCTGAAGGCCCGTGGGAAGAGCAGCTGCTCGTGCCGTTTGTTGTCGTG
GCGGCAGCGGTAGCCCCCGGCGGCCGCGGCCGCGGCTGTGGGCGCAGCAC
CGGGCGGGCAGGCGGGGGCAACCCGGCGCCGCCGTCCATGTACTAAAGAC
AAAAACACAGAACAGACAAGTACTCGTGCAGTGCCTACTGGCATTGAAGT
ACTGCGCCTTCCGCAGTGTTTGGGAGGAAATGTGCCAAAAGGTACCTTAT
ACTGTACTACTACTGTACGTCGTATGTACTGCAACCACTGTCGCGGTCTT
CAGTGACACGGCCTGCACCTCGCTCAGCGTTGTCTGTTAATACCGCACGT
ATACATGTACTCAAGTACTCCGTACAGCTAGTACTTCCGGACTACAATAC
CGCAAGTCCCAACTTTGCAGTAGTGTGTGTGGCACTCTATGTACGAGTAC
TCGGACTCTTACAGTACGTAGTACTCTACTTCAACTGCGTGGCACTCGGG
GAAACACCTCCATGCCCTGTGGTGACGAGCTACTTTGACATGGCTGCCAT
GGGCAAAGCGGCCTGCTGAAAGAGAGACTCGCTCGGGAAGTGAGGCTGCC
CCAAATCTTCAGCTCCGGAGCCGCATCAAGTGCTGCCATGACCTGATGAC
ATGGAGAAATCTGCATGTACTTTACCTGCAGTATGTAAATCATGTTGATG
GGCGGGCTCCGCCTTTCTCTGCCTCTCCCGGTGTCGACATTTTGACTAGG
CAGATTCATACTCTTTGAGCTCTAGAGGGCGTTTGTTGACAAATTGGATC
CATCTGCGGGGCGACTACTGTAGCTCTTACTTGGCCCGGTAAATATACGC
TGCTACCAAAATGCGGAGCAGGATCCATTCTTGGAAGGCGTGTGAGTCCC
GTGTAACTTGGCGCAAGGCGAGGAAGTTCTCGGCATCTTGCCCAACAGCT
AAACCCTTTGACCCCTGGTAAATTGGACTTCAACACCAAACCCTGACCAT
ACGGACCCCTGGGGTAAAGGGGACAAAGGGGCACAGCGGAACGCAGGGTC
ATGGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:1257359..1265013+

>mRNA_S-ischiensis_contig8.19412.1 ID=mRNA_S-ischiensis_contig8.19412.1|Name=mRNA_S-ischiensis_contig8.19412.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1230bp|location=Sequence derived from alignment at S-ischiensis_contig8:1257359..1265013+ (Schizocladia ischiensis KU_0333)
ATGATGTCCATCTTGGATTACAATGGGGCCGCTATCTTCGCCATGGCGGG
GAAGGATTGCGTGGGGATCGCGGCGGACACAAGGCTCGGCGTGCAGGGGC
AAACCGTGGCAACAGACTTCCAGAAGGTCTTCAAAATGAACGATAAGCTC
ATGTCCATCTTGGATTACAATGGGGCCGCTATCTTCGCCATGGCGGGGAA
GGATTGCGTGGGGATCGCGGCGGACACAAGGCTCGGCGTGCAGGGGCAAA
CCGTGGCAACAGACTTCCAGAAGGTCTTCAAAATGAACGATAAGCTCATG
GTGGGGTTGCCGGGGCTGGCTACAGACGTGATGACCGTGCAGCAGCTGCT
CACCTTCCGCCTGAACATGTACCGCCTGCGCGAGGAGCGCGAGATCAAGC
CGCAGACCTTTGCGGCGCTCGTGTCGCACATGCTGTACGAACGGAGGTGG
GGTTGCCGGGGCTGGCTACAGACGTGATGACCGTGCAGCAGCTGCTCACC
TTCCGCCTGAACATGTACCGCCTGCGCGAGGAGCGCGAGATCAAGCCGCA
GACCTTTGCGGCGCTCGTGTCGCACATGCTGTACGAACGGAGATTCGGGC
CGTACTTTGTGGAGCCGGTGGTGGTGGGGCTGACGGACAAGGGCAAGCCC
TACTTGACGGGCTTCGACCTCATCGGGTCGTCGGTCGAGACGCAGGACTA
CGTGGTTGCAGGGACGTGCACAAACAACCTCCACGGCATGTGCGAAACTC
TCTTCCGCAAAGACATGATTCGGGCCGTACTTTGTGGAGCCGGTGGTGGT
GGGGCTGACGGACAAGGGCAAGCCCTACTTGACGGGCTTCGACCTCATCG
GGTCGTCGGTCGAGACGCAGGACTACGTGGTTGCAGGGACGTGCACAAAC
AACCTCCACGGCATGTGCGAAACTCTCTTCCGCAAAGACATGGACAAGGA
CGAGTTGTTTGAGACCATGGGACAGTGCCTGCTGGCGGCCGTGGACCGAG
ACGCCCTGAGTGGCTGGGGAGGCGTTGTCCATATCATCACGCCGGAGGGG
ATCACCTCCAAAAAGCTCCGCTGCCGCATGGACTGAGACAAGGACGAGTT
GTTTGAGACCATGGGACAGTGCCTGCTGGCGGCCGTGGACCGAGACGCCC
TGAGTGGCTGGGGAGGCGTTGTCCATATCATCACGCCGGAGGGGATCACC
TCCAAAAAGCTCCGCTGCCGCATGGACTGA
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