mRNA_S-ischiensis_contig8.19392.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: A0A835Z2J1_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J1_9STRA) HSP 1 Score: 197 bits (500), Expect = 3.030e-58 Identity = 96/172 (55.81%), Postives = 132/172 (76.74%), Query Frame = 3
Query: 222 ESMKSSSRRLLGEQEE--KTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYSAVPGRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSFCTQVCC 731
ES++ S+RRLLG++E KT A+ELEE VC CP+LTYK+R++GF CLT+G ILT G+LFR+++L+AG+P PFVI YS+GN++S+C+SFFL+GPWAQ+K MF PTR AT VY++ LG TF VA +P R P+L+ LVV+QF + +WY LSY+P+AR++ C C
Sbjct: 23 ESVRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRC 194
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: D8LG13_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG13_ECTSI) HSP 1 Score: 193 bits (490), Expect = 5.030e-57 Identity = 98/167 (58.68%), Postives = 131/167 (78.44%), Query Frame = 3
Query: 222 ESMKSSSRRLLG-EQEEKTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAF--YSAVPGRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSF 713
ESMK+SS RLLG E EEK+T QE+EEAVC +CP+L+++ R++G+ ACL +G LT GSLFR+ QLL G+P PFV+++SLG+ +++CSSFFL+GPW Q+K MF P RA AT +YL+ L AT FVA Y++VP RG +L+ LVV QF + VWYTLSYVP+AR++ F
Sbjct: 6 ESMKASSMRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRAVATSIYLATLSATLFVALSPYASVPFRGILLLCLVVAQFLSYVWYTLSYVPFARRFMAGF 172
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: F0YE90_AURAN (Vesicle transport protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE90_AURAN) HSP 1 Score: 167 bits (422), Expect = 6.380e-47 Identity = 80/172 (46.51%), Postives = 120/172 (69.77%), Query Frame = 3
Query: 228 MKSSSRRLLGEQEEKTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYSA-VPGRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSFCTQVCCTDV 740
M S+ L GE +T A+++EE C CP L++K+R++GF+ C +G+++ GS R+++L+ G+P PF + YSLGN++++CSSFFL+GP+ Q KSM APTR AT YL A+GAT FVA + A +P R ++I+LV VQ A+ WY +SY+P+AR + K+ C + CC D
Sbjct: 1 MASTRSLLTGEPRPQTVAEQVEEECCKACPRLSWKQRLIGFSLCFALGVVVELGSFMRIVELVGGNPKPFAVTYSLGNVIAICSSFFLAGPYKQCKSMLAPTRVIATATYLVAIGATLFVALFDARIPARAGLIILLVCVQTIALFWYMISYIPFARDFVKN-CCKGCCADA 171
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: A0A7S3JV88_9STRA (Vesicle transport protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV88_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.860e-43 Identity = 77/159 (48.43%), Postives = 111/159 (69.81%), Query Frame = 3
Query: 252 LGEQEEKTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYSAVP--GRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSFCTQ 722
L E++ KT A+E E+A+C +CP LTY++R+ G+ AC + L+ GS RL++L+ G+P PFV+FY+LGN++++ S FLSGP AQ K M+ PTR AT VYL + T FVAFY +P GR I+I+ + +Q+ AM+WYT+S++PYAR Y C Q
Sbjct: 10 LAEEKPKTAAEEFEDALCSICPQLTYQQRIGGYIACFFVSFCLSIGSFTRLVELVKGNPAPFVVFYTLGNVMAIIGSLFLSGPRAQCKKMWDPTRRIATSVYLLTIFFTIFVAFYEGIPDDGRIGIIIMCIFIQWIAMLWYTISFIPYARDYVIMICCQ 168
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: A0A7S3MGJ6_9STRA (Vesicle transport protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGJ6_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.200e-42 Identity = 79/161 (49.07%), Postives = 109/161 (67.70%), Query Frame = 3
Query: 258 EQEEKTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYSA-VPGRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSFCTQVCCTD 737
EQ +K ++LEE VC + P LTY++R++G CL IG IL+ GS FRL++L+ GDP+PF Y++GNIV + S+ FL GP +QVK MFAPTR AT VYL + T +AFY +P R L++ + QF A+VWY LSY+P+AR+ K+ C +CC D
Sbjct: 21 EQRQKEWYEDLEEQVCSIFPALTYQQRIIGCLTCLLIGFILSMGSTFRLIKLMEGDPEPFATMYTIGNIVGLFSTCFLYGPVSQVKQMFAPTRLVATAVYLFFMATTLLLAFYPEYIPVRVMWLLISIFFQFLALVWYNLSYIPFAREIMKNMCQTMCCKD 181
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: W7THB3_9STRA (Vesicle transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THB3_9STRA) HSP 1 Score: 155 bits (391), Expect = 6.130e-42 Identity = 79/155 (50.97%), Postives = 112/155 (72.26%), Query Frame = 3
Query: 237 SSRRLLG-EQEEKTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYSAVPGRGPILIVLVVVQFFAMVWYTLSYVPYARQ 698
S+RRLLG E KT + LEE +C CPTLT+++R+ G C +G+IL GS FR +LL G P+PF + Y++GN++S+ S FLSGP++QVKSMF PTRA T VY+ L T +AF S VPG+GP+L+++++VQF ++ +Y LSY+P+ARQ
Sbjct: 33 SARRLLGVEARPKTFCERLEEDMCWWCPTLTWQQRLFGCLCCFLVGMILEFGSFFRFTKLLTGHPEPFAVMYTIGNLISLAGSCFLSGPFSQVKSMFHPTRAVCTSVYVLTLVFTLLIAF-SDVPGQGPLLVLMIIVQFLSLSYYILSYIPFARQ 186
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: A0A482RX34_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX34_9ARCH) HSP 1 Score: 151 bits (381), Expect = 7.320e-40 Identity = 73/161 (45.34%), Postives = 112/161 (69.57%), Query Frame = 3
Query: 258 EQEEKTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYSA-VPGRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSFCTQVCCTD 737
E E+K +ELEE+VC CP ++ ++R+MG C+ G +++ GS RL++LL G P+ F + Y+LGN++ +CS+ FL GP +Q K MFA TR AA+++YL+ +G T F+AFY A VPGR +L++ +V+QF A+ WYTLS++P+AR + T+ C D
Sbjct: 23 EPEQKEWYEELEESVCSTCPKMSLQQRIMGCLVCMGTGFLISMGSTLRLVRLLEGHPEDFAVMYTLGNVLGLCSTCFLYGPLSQAKQMFASTRLAASLIYLTLMGTTLFLAFYPAYVPGRLALLVLSIVLQFLALTWYTLSFIPFARDLVAACLTRSCGCD 183
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: A0A7S2XZK4_9STRA (Vesicle transport protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZK4_9STRA) HSP 1 Score: 145 bits (365), Expect = 5.360e-39 Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 3
Query: 339 VMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYSAVPGRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSFCTQVCC 731
++G A L GL+L+ GS+FR+MQL+ G P PFV+FYSLGN+VS+C S FLSGPW Q+K MFAPTRA ATIVYLS L T +AF VP +G IL++L +VQ A+ WY LSY+P AR Y CC
Sbjct: 1 MIGCAVTLGFGLLLSMGSVFRIMQLIRGRPIPFVVFYSLGNVVSLCGSMFLSGPWNQIKRMFAPTRAFATIVYLSTLVTTLTLAFTPGVPFKGGILLILFIVQLLALFWYMLSYIPGARNYATKCLKASCC 131
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: A0A7S2IBZ2_9STRA (Vesicle transport protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBZ2_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.250e-38 Identity = 76/156 (48.72%), Postives = 109/156 (69.87%), Query Frame = 3
Query: 261 QEEKTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYS-AVPGRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSFCTQV 725
+EEK+ ++EE VC L P LT ++RV+G +C+ G +L+ GS FRL LL G P PFV+ +LGNI+++C S FL+GP AQ K MF R ATI+YLS++ AT VAF +PG+GP+LI+L++ Q+ ++ WY LSY+P+ARQ FC++V
Sbjct: 48 EEEKSWQDQIEEEVCELFPALTLQQRVIGCISCMVFGYLLSFGSFFRLAGLLKGKPVPFVVAATLGNIIALCGSCFLTGPAAQTKKMFHDDRRIATIMYLSSVIATLIVAFACHKMPGQGPLLILLMICQYISVTWYCLSYIPFARQMVSQFCSRV 203
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Match: A0A8J2SX58_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX58_9STRA) HSP 1 Score: 133 bits (335), Expect = 5.100e-34 Identity = 73/163 (44.79%), Postives = 107/163 (65.64%), Query Frame = 3
Query: 243 RRLLG-EQEEKTTAQELEEAVCGLCPTLTYKERVMGFAACLTIGLILTCGSLFRLMQLLAGDPDPFVIFYSLGNIVSVCSSFFLSGPWAQVKSMFAPTRAAATIVYLSALGATFFVAFYSAVP--GRGPILIVLVVVQFFAMVWYTLSYVPYARQYCKSFCTQ 722
R+ +G E+++ T Q L+E+ CP L+Y +R+ G+ C++IG ILT GSL RL +LL G+P FVI+++ GN+ ++ S FFLSGP + K M PTR AT YL + TFFV FY +P GR I+I+ V +Q+ AM+WYT+S++P+AR + C Q
Sbjct: 5 RKAVGIEKKQTVTDQILDES----CPKLSYNQRLTGYVLCMSIGFILTMGSLVRLKELLHGEPKNFVIYFTFGNLCAIASCFFLSGPKSHCKKMIDPTRRIATAFYLITIFFTFFVVFYEKIPDDGRVGIIILCVFIQWIAMLWYTISFIPFARDWVCMCCCQ 163 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19392.1 >prot_S-ischiensis_contig8.19392.1 ID=prot_S-ischiensis_contig8.19392.1|Name=mRNA_S-ischiensis_contig8.19392.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=184bp MSMSLSSEWLESMKSSSRRLLGEQEEKTTAQELEEAVCGLCPTLTYKERVback to top mRNA from alignment at S-ischiensis_contig8:1155256..1158254- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19392.1 ID=mRNA_S-ischiensis_contig8.19392.1|Name=mRNA_S-ischiensis_contig8.19392.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2999bp|location=Sequence derived from alignment at S-ischiensis_contig8:1155256..1158254- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1155256..1158254- >mRNA_S-ischiensis_contig8.19392.1 ID=mRNA_S-ischiensis_contig8.19392.1|Name=mRNA_S-ischiensis_contig8.19392.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1104bp|location=Sequence derived from alignment at S-ischiensis_contig8:1155256..1158254- (Schizocladia ischiensis KU_0333)back to top |