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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 818 |
| Cds size | 741 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817266.0469534-UTR-S-ischiensis_contig8:985920..985969 | 1622817266.0469534-UTR-S-ischiensis_contig8:985920..985969 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 985921..985969 + |
| 1695740980.7168198-UTR-S-ischiensis_contig8:985920..985969 | 1695740980.7168198-UTR-S-ischiensis_contig8:985920..985969 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 985921..985969 + |
| 1622817266.0594323-UTR-S-ischiensis_contig8:986078..986105 | 1622817266.0594323-UTR-S-ischiensis_contig8:986078..986105 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 986079..986105 + |
| 1695740980.7314458-UTR-S-ischiensis_contig8:986078..986105 | 1695740980.7314458-UTR-S-ischiensis_contig8:986078..986105 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 986079..986105 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817266.0723813-CDS-S-ischiensis_contig8:986105..986846 | 1622817266.0723813-CDS-S-ischiensis_contig8:986105..986846 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 986106..986846 + |
| 1695740980.743122-CDS-S-ischiensis_contig8:986105..986846 | 1695740980.743122-CDS-S-ischiensis_contig8:986105..986846 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 986106..986846 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19369.1 >prot_S-ischiensis_contig8.19369.1 ID=prot_S-ischiensis_contig8.19369.1|Name=mRNA_S-ischiensis_contig8.19369.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=247bp
MNKEMEDAVGTGIGPDGYRNRAEQQAAAVAAMSCAAEAAAAAVASYAPPH
PAGPGQEYSQHHLHQWFRSPAELGLSGTGPKVSPQVPPPPAVGAVGGAPP
PLHQGAFPYRRGHRVQPPPSAPWYPYGVPPGYQYGAAVGMSPAALAPQAA
GQAGGPEGLSVAGLPQGPFGVPGVVGPWGLRTPAGRPPEPTAGTMLGPLS
ASSDGMAAGSPRRPFPGRVRGAPGLGPGLASSGMPGFSVVSSAPVPA back to topmRNA from alignment at S-ischiensis_contig8:985921..986846+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19369.1 ID=mRNA_S-ischiensis_contig8.19369.1|Name=mRNA_S-ischiensis_contig8.19369.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=926bp|location=Sequence derived from alignment at S-ischiensis_contig8:985921..986846+ (Schizocladia ischiensis KU_0333)
GATCAACACACACAGACCGAGGACATGTGGAGCGAAGTACGGGAAGAAGG
TGAGGCCCGAGTCATCCGTTCCCATTGCCCTTGTCCTTGCCTCCCCTATT
GCCGGGATTGTGATCCGACAGGCTCGTCCCCTGCCTGTGCCCTGGTGTGT
ACCTGCAGGTGGTTGATCGTTAGCGGCACGTAGTGATGAATAAGGAGATG
GAGGACGCTGTTGGGACTGGGATCGGGCCCGATGGCTATCGGAACAGAGC
TGAACAGCAAGCGGCGGCCGTGGCAGCCATGAGTTGTGCAGCGGAGGCGG
CAGCGGCGGCCGTTGCCTCTTACGCCCCGCCGCATCCCGCTGGCCCTGGT
CAGGAGTACTCACAACACCACCTGCACCAGTGGTTCCGCTCGCCTGCGGA
ACTGGGATTGTCGGGGACGGGGCCCAAGGTGTCGCCCCAGGTGCCACCTC
CTCCCGCTGTTGGGGCAGTGGGGGGGGCGCCCCCGCCTCTACACCAGGGC
GCCTTCCCCTACAGACGGGGACACAGGGTGCAGCCCCCTCCAAGCGCCCC
CTGGTATCCGTATGGAGTCCCCCCGGGGTACCAGTACGGCGCTGCGGTGG
GTATGTCGCCCGCGGCACTGGCTCCGCAGGCAGCGGGCCAGGCGGGGGGT
CCGGAAGGGTTGTCCGTGGCAGGCCTGCCTCAGGGGCCCTTTGGCGTCCC
GGGAGTGGTGGGGCCTTGGGGTCTGAGGACACCGGCTGGCAGGCCTCCGG
AGCCGACGGCAGGCACGATGTTGGGCCCGTTGTCGGCGAGCAGTGACGGG
ATGGCTGCGGGATCCCCACGCCGCCCGTTCCCCGGCAGAGTGCGTGGGGC
GCCGGGCCTTGGGCCTGGCTTGGCCTCTTCAGGCATGCCGGGTTTCTCCG
TCGTGAGCTCAGCGCCGGTGCCCGCG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:985921..986846+ >mRNA_S-ischiensis_contig8.19369.1 ID=mRNA_S-ischiensis_contig8.19369.1|Name=mRNA_S-ischiensis_contig8.19369.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1482bp|location=Sequence derived from alignment at S-ischiensis_contig8:985921..986846+ (Schizocladia ischiensis KU_0333)
ATGAATAAGGAGATGGAGGACGCTGTTGGGACTGGGATCGGGCCCGATGG
CTATCGGAACAGAGCTGAACAGCAAGCGGCGGCCGTGGCAGCCATGAGTT
GTGCAGCGGAGGCGGCAGCGGCGGCCGTTGCCTCTTACGCCCCGCCGCAT
CCCGCTGGCCCTGGTCAGGAGTACTCACAACACCACCTGCACCAGTGGTT
CCGCTCGCCTGCGGAACTGGGATTGTCGGGGACGGGGCCCAAGGTGTCGC
CCCAGGTGCCACCTCCTCCCGCTGTTGGGGCAGTGGGGGGGGCGCCCCCG
CCTCTACACCAGGGCGCCTTCCCCTACAGACGGGGACACAGGGTGCAGCC
CCCTCCAAGCGCCCCCTGGTATCCGTATGGAGTCCCCCCGGGGTACCAGT
ACGGCGCTGCGGTGGGTATGTCGCCCGCGGCACTGGCTCCGCAGGCAGCG
GGCCAGGCGGGGGGTCCGGAAGGGTTGTCCGTGGCAGGCCTGCCTCAGGG
GCCCTTTGGCGTCCCGGGAGTGGTGGGGCCTTGGGGTCTGAGGACACCGG
CTGGCAGGCCTCCGGAGCCGACGGCAGGCACGATGTTGGGCCCGTTGTCG
GCGAGCAGTGACGGGATGGCTGCGGGATCCCCACGCCGCCCGTTCCCCGG
CAGAGTGCGTGGGGCGCCGGGCCTTGGGCCTGGCTTGGCCTCTTCAGGCA
TGCCGGGTTTCTCCGTCGTGAGCTCAGCGCCGGTGCCCGCGATGAATAAG
GAGATGGAGGACGCTGTTGGGACTGGGATCGGGCCCGATGGCTATCGGAA
CAGAGCTGAACAGCAAGCGGCGGCCGTGGCAGCCATGAGTTGTGCAGCGG
AGGCGGCAGCGGCGGCCGTTGCCTCTTACGCCCCGCCGCATCCCGCTGGC
CCTGGTCAGGAGTACTCACAACACCACCTGCACCAGTGGTTCCGCTCGCC
TGCGGAACTGGGATTGTCGGGGACGGGGCCCAAGGTGTCGCCCCAGGTGC
CACCTCCTCCCGCTGTTGGGGCAGTGGGGGGGGCGCCCCCGCCTCTACAC
CAGGGCGCCTTCCCCTACAGACGGGGACACAGGGTGCAGCCCCCTCCAAG
CGCCCCCTGGTATCCGTATGGAGTCCCCCCGGGGTACCAGTACGGCGCTG
CGGTGGGTATGTCGCCCGCGGCACTGGCTCCGCAGGCAGCGGGCCAGGCG
GGGGGTCCGGAAGGGTTGTCCGTGGCAGGCCTGCCTCAGGGGCCCTTTGG
CGTCCCGGGAGTGGTGGGGCCTTGGGGTCTGAGGACACCGGCTGGCAGGC
CTCCGGAGCCGACGGCAGGCACGATGTTGGGCCCGTTGTCGGCGAGCAGT
GACGGGATGGCTGCGGGATCCCCACGCCGCCCGTTCCCCGGCAGAGTGCG
TGGGGCGCCGGGCCTTGGGCCTGGCTTGGCCTCTTCAGGCATGCCGGGTT
TCTCCGTCGTGAGCTCAGCGCCGGTGCCCGCG back to top
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