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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 364 |
| Cds size | 291 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817254.564381-CDS-S-ischiensis_contig8:31465..31703 | 1622817254.564381-CDS-S-ischiensis_contig8:31465..31703 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 31466..31703 - |
| 1695740972.8896394-CDS-S-ischiensis_contig8:31465..31703 | 1695740972.8896394-CDS-S-ischiensis_contig8:31465..31703 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 31466..31703 - |
| 1622817254.5813034-CDS-S-ischiensis_contig8:34173..34226 | 1622817254.5813034-CDS-S-ischiensis_contig8:34173..34226 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 34174..34226 - |
| 1695740972.9016008-CDS-S-ischiensis_contig8:34173..34226 | 1695740972.9016008-CDS-S-ischiensis_contig8:34173..34226 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 34174..34226 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817254.5929568-UTR-S-ischiensis_contig8:34226..34298 | 1622817254.5929568-UTR-S-ischiensis_contig8:34226..34298 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 34227..34298 - |
| 1695740972.9277322-UTR-S-ischiensis_contig8:34226..34298 | 1695740972.9277322-UTR-S-ischiensis_contig8:34226..34298 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 34227..34298 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19232.1 >prot_S-ischiensis_contig8.19232.1 ID=prot_S-ischiensis_contig8.19232.1|Name=mRNA_S-ischiensis_contig8.19232.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=97bp
MALGGTGRGASLGHLARRHLAGLHATPSPPPVVPLAGRTRAAPGPGRRPP
NASQPPLLPPPRRGDEAGARLAAACHPPGGRAARWPSPAATATAVVG back to topmRNA from alignment at S-ischiensis_contig8:31466..34298- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19232.1 ID=mRNA_S-ischiensis_contig8.19232.1|Name=mRNA_S-ischiensis_contig8.19232.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2833bp|location=Sequence derived from alignment at S-ischiensis_contig8:31466..34298- (Schizocladia ischiensis KU_0333)
GGGGAATCGAATCAAGACCCGCTGGAGGTGCTGGCCAGGGTTGGGGCGCA
ATAACAGGGACAAGGGCATGACATGGCGTTGGGCGGGACAGGACGCGGCG
CGAGCCTCGGCCACCTGGCGCGCCGGTGAGATTGAATGACGGAAACTATG
TACGCCGGAACATGAGAACCGTGGATTGGGGGCAGGTGTTGTGGCCCGCC
GGCTCCTGCTGGATCATGCTGTCCCGCCCCGATGACGATTGGGGAACGTG
TGAGCAGCAAGCGTTTGGTGTGGGAGGTAGTGGCGCTTGTCAAAGCAGAG
ACGTCCTTCTTGCGGCAAGTCGCCCTGGGCTGTGTCATGGTTGCACCAAC
CGCTTGCTTTGGCAGCCATTCCCTTTAATTTCGTTGCTGGACGCCCTTGC
CTTGAGTGGTATGGTACAGACACACAATGGTTATGCTTGTAAAAGCGGCT
GGGTATGTGCAACACCAAGCTCTCTTCACCAGTTCGTCTCTGGCCCCTTG
TTTCTTTTCCAGCCGGTTTTACTTCCGTTTCAAGCCTTTTTTCCGGCCCG
AGTGATAGGCACATGAAAGCTGTAAGTATGAGCTGACATGCGCTTCATTT
GTGCCCATGCGGACGAGCAACTTCAGTATTGCACCACCCAGATCATTGTG
TGTGTGCTGTGATAGGTGTTTTCTGGCGACCAGATGCGTAACAAATTCGG
TGCCTTTGCTTGTTTCCTTGGTGTACGGCACCAAGCACGTCCAGCGGGGA
GCTTGTATGCACCCACCATGCGGGGCACTACTTACGCACAATCTTGTGTT
GCTGGTTCGTTTTGCGAACATCATCGGTAACATCATCGGTCCGTTTCGTG
GAGCTATGCGCCATCGAGAAGTGGAGGTTCTACTCGTACGTGTTAAACAA
CGCTCGAAATATCAGGACGAATTGAGCGCGAAAACGCGTGGCCGTGCGGG
GTGATCAAATCAACTCTCCTTCGCTTTATATCGTACAGCGGTCTCGGTAT
TGGGCTGCATGCCCTCTCGACTCTTCCGAGTTGGGAGCCGCCCGCCCCGG
TCCGTGGCAACATTGCACACACACACACACACACACACACACACACACAT
TAAACCATTGATGGCGTGTGGTCAATGGTCTCGCAACTACGGCACGCACA
ACGTGAGTACTTACATGTATACATATTAAGCACCGTCCACATGGCTCTCA
CGTTTTCGTTCATACAAGTATATATATACGTACTAAATATATCACCACCC
GTGAGGCTGGTCGGCGGTCCAGTCCAGCAGGTATAGTGGGCCGCTCTCCG
GCGGCATGGTTTCCTGTACTATGCAGTAGTGCAACAAACCCAGCACCTCA
TATGGTGGGGCAATAGTACCTACTTCCCAACTACTAAGATTTCCTCTCCC
TCTGCTCTTGTCTATGTCTCTCCCAACCGGACACATGGTCGCCCTCCTCA
ACAACGTCCTTGCTCTGCGGGCCTAGTGCGCTGCGTCATGTTTGTGGGAG
AGTCGGGAAGATTTCGACCGCTTTGGGGGGGGACAGTCTACGTACTTGTA
GCACAAATGGGGTAATTAGGGGTCGAATCGGGCCAATGCTATGTACGAGT
ACTACGGAAGGGCATATTACGTAAGACTGAAGAATGCTGTTTGTAGGCCG
AAATAGGCCGAATGGGGCCCGCGACCGCGAAAAAAAAAAAAGAGACGAAA
TAAGCATCGCGCCACAACCGGAAGGAATCGCGGCAAGGTTCCGTAGTGAA
ATTTGATCCTTGGGAGTTGCGGAGCTATCGCACGTTACTTGACGGTCATC
CGAGCTGCCGTTCCAAAGTTGCAGCCGTTGGAAGGAGGGGGGTGCGGTAG
AAAAGTGCCGAAAAGCACCCAAACGGGGGGGAACAACTCTCCCGCGCTTC
GCGTCGCGCGGGGGTGGGACTTTTTCCCACGTGCCGTCCACCTCGCGCCC
TAGTGGGTGACTAAGCCGGATTTGTGATTCGTTGCCTCATTCGTGAGTTA
TAGCTTAGACGTTCGAACAACGAGAAGCTGATCATCGGCGAGGCCGGTTC
ATTAGTCAAGTGATTTGAGGTTCGAACATTTCCAGATTTAGCCGGCAACG
GTCATAATCGTCGATTTTCGGCGAATTAACCGCGATAGCTCGACGATTAA
TCGGTATTGGATCGCGAAATCGCACAATCATCGAACGCTCGGCCAGACCT
TTCGAACGAGCTATTGCACGTCAACTGACTCGGTCTCAATCCCGAGGTAT
GAATTTGAACGTGGCCAGTTCTTAAATACTATGCCCTTCCATAGTATGTA
CTCTTGTATGCTTGCCGTAGTCCTGAGACCATTGACCACACGCCTCGATC
GAGGCGGAGCAGGCCCCCTCCCTCCCCGGCAATAGGCAACTCCAGAACAC
CCGCTCCATGACTGGCCGCTTCGGAATGTTTCCGGGTTTTCCCGCCGCCA
GTGTTGGGCAAAAATCGCTCTCGCACAGCCTACTGTTGTACTTCGAAGTA
ACTGGGAGGGCAATACATATCTGTCCTGACAACCTACAAGCGGCGACCCC
CCCGGCCTCCTCCCCCTCTGCACAATAACATTTACTTCCGAGCAGGCATC
TCGCAGGCCTGCACGCCACGCCCTCCCCGCCGCCAGTAGTACCACTTGCC
GGGCGGACTAGGGCTGCTCCCGGGCCCGGGCGCCGGCCGCCGAACGCCTC
CCAACCGCCGCTGCTGCCCCCGCCGCGCCGAGGCGATGAGGCAGGTGCAA
GGCTCGCTGCGGCATGCCACCCTCCCGGGGGGCGCGCGGCGCGGTGGCCT
TCGCCCGCCGCCACCGCCACCGCAGTTGTTGGT back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:31466..34298- >mRNA_S-ischiensis_contig8.19232.1 ID=mRNA_S-ischiensis_contig8.19232.1|Name=mRNA_S-ischiensis_contig8.19232.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=582bp|location=Sequence derived from alignment at S-ischiensis_contig8:31466..34298- (Schizocladia ischiensis KU_0333)
ATGGCGTTGGGCGGGACAGGACGCGGCGCGAGCCTCGGCCACCTGGCGCG
CCGATGGCGTTGGGCGGGACAGGACGCGGCGCGAGCCTCGGCCACCTGGC
GCGCCGGCATCTCGCAGGCCTGCACGCCACGCCCTCCCCGCCGCCAGTAG
TACCACTTGCCGGGCGGACTAGGGCTGCTCCCGGGCCCGGGCGCCGGCCG
CCGAACGCCTCCCAACCGCCGCTGCTGCCCCCGCCGCGCCGAGGCGATGA
GGCAGGTGCAAGGCTCGCTGCGGCATGCCACCCTCCCGGGGGGCGCGCGG
CGCGGTGGCCTTCGCCCGCCGCCACCGCCACCGCAGTTGTTGGTGCATCT
CGCAGGCCTGCACGCCACGCCCTCCCCGCCGCCAGTAGTACCACTTGCCG
GGCGGACTAGGGCTGCTCCCGGGCCCGGGCGCCGGCCGCCGAACGCCTCC
CAACCGCCGCTGCTGCCCCCGCCGCGCCGAGGCGATGAGGCAGGTGCAAG
GCTCGCTGCGGCATGCCACCCTCCCGGGGGGCGCGCGGCGCGGTGGCCTT
CGCCCGCCGCCACCGCCACCGCAGTTGTTGGT back to top
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