mRNA_S-ischiensis_contig79.19159.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: A0A6H5KIJ3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIJ3_9PHAE) HSP 1 Score: 221 bits (564), Expect = 1.150e-65 Identity = 128/235 (54.47%), Postives = 162/235 (68.94%), Query Frame = 1
Query: 1 MQKQAPEEELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGGGEESEQVDVVLEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGLCGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLNLERNCGSHLVQGLGQNQADAVLGSGXXXXXXXGADGGELSKAAGAVAKVSVSMERLTWGDHPSFVERHGG 705
MQ+QA E+ELGLS+AAL ALKEFA++ +L G D D D+RL+VQE MD +R +EF F FG + EQV + L G+N ELGQTL+STGLTVWR A+E++RFMWEHRRWF G RVVELGAGLGLCGI+A+KLC G VV+TDGGEEFT A ALR NL +N + L +N ++A +G G A AAG A+V+ +E+LTWG+H +F+ER+GG
Sbjct: 1 MQQQADEDELGLSSAALAALKEFALENNMLGGDD--DVVDVRLQVQERMDVKKRTHEFSFTFGDDGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFA------GKRVVELGAGLGLCGILASKLCTGGTVVITDGGEEFTNSAMDALRANLIKNSCNLLAHSPARNGSNAAVGCGGDAAAVGAA-------AAGRGARVA--LEKLTWGEHEAFLERNGG 218
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: A0A836C7F5_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7F5_9STRA) HSP 1 Score: 125 bits (314), Expect = 6.010e-30 Identity = 95/236 (40.25%), Postives = 116/236 (49.15%), Query Frame = 1
Query: 10 QAPEEELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGGGEESEQ------VDVVLEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGLCGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLNLERNCGSHLVQGLGQNQADAVLGSGXXXXXXXGADGGELSKAAGAVAKVSVSMERLTWGDHPSFVERH 699
QA EEELGLS L ALKEFA L GLD + D R VQ+ MDT R F F F Q V V L G++ ELGQTL+STGLTVW A L+ +++ R V+ELGAGLGLCGI+ AKL G VV+TDGG+EFT+EA AL +ERN + A ++ERLTWGDH +F++ H
Sbjct: 5 QADEEELGLSEDTLRALKEFA---SLNLGLDP-NAADFRRTVQDAMDTIPRNENFTFNFTSDAPQTQPGAGDAVTVELSGVSPELGQTLASTGLTVWTAARHLAHYLFHIRDQIAART------VIELGAGLGLCGILCAKL--GGSVVVTDGGDEFTDEALGALVEQVERN-------------------------------------RSVTAAAFECAVERLTWGDHDAFLKAH 191
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: A0A7R9UAN4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAN4_9STRA) HSP 1 Score: 118 bits (296), Expect = 9.990e-28 Identity = 81/170 (47.65%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 10 QAPEEELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGGGEESEQVDVVLEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGL----CGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLNLERN 507
QAPEEELGLSAAAL AL EFA+D G+L D D +R +VQ + E E F F G V + +EG +LGQTLSSTGLTVW GAE+L+ ++W HR P + Q VVELGAGLGL CG + A G V+ TDG + E+ LR N+E N
Sbjct: 12 QAPEEELGLSAAALAALAEFALDNGILAEADA--DSSIRQQVQSHFEALEPEKEELFTFEYG----HVRLTMEGWRRDLGQTLSSTGLTVWSGAEDLAAYLWRHRAVLFPEKSQ--KVVVELGAGLGLPGILCGAIMALASDSGTVICTDGDDNSLEK----LRRNVEIN 169
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: A0A7R9UBL8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBL8_9STRA) HSP 1 Score: 118 bits (296), Expect = 9.150e-27 Identity = 81/170 (47.65%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 10 QAPEEELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGGGEESEQVDVVLEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGL----CGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLNLERN 507
QAPEEELGLSAAAL AL EFA+D G+L D D +R +VQ + E E F F G V + +EG +LGQTLSSTGLTVW GAE+L+ ++W HR P + Q VVELGAGLGL CG + A G V+ TDG + E+ LR N+E N
Sbjct: 12 QAPEEELGLSAAALAALAEFALDNGILAEADA--DSSIRQQVQSHFEALEPEKEELFTFEYG----HVRLTMEGWRRDLGQTLSSTGLTVWSGAEDLAAYLWRHRAVLFPEKSQ--KVVVELGAGLGLPGILCGAIMALASDSGTVICTDGDDNSLEK----LRRNVEIN 169
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: A0A833WMX4_PHYIN (Lysine methyltransferase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A833WMX4_PHYIN) HSP 1 Score: 107 bits (268), Expect = 1.740e-23 Identity = 66/162 (40.74%), Postives = 103/162 (63.58%), Query Frame = 1
Query: 19 EEELGLSAAALDALKEFAVDTGL-LEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFG--GGEESEQVDVVLEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGLCGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLN 495
EE+L LS AAL AL+EFA++ G+ +E + D+RL +Q+ +D + + F+F+FG G EE ++ + L G+ ++GQTL STGLT+WR + LS +M++ R F G ++ELG+GLGL GI+A+ L + +VV+TDG ++ E A +LN
Sbjct: 9 EEQLVLSGAALAALQEFAIERGIAVED----ESSDVRLDIQKALDIEPKEDSFEFKFGKNGDEEDAEITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSEYMYQDRGRFA------GKSIIELGSGLGLIGILASYLTDK-KVVITDGDDDTIELLVANCKLN 159
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: A0A662YF07_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF07_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.410e-23 Identity = 65/160 (40.62%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 22 EELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGGGEESEQVDVV--LEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGLCGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLN 495
E+L LS+AAL AL+EFA++ G+ + D +R+++Q+ +D + + F F+FG +++E +V L G+ ++GQTL STGLT+WR + LS +M+ +R F G VVELG+GLGLCGI+A+ L + +VV+TDG ++ E A +LN
Sbjct: 9 EQLTLSSAALAALQEFAIERGIAVEEEATD---VRMEIQKALDIEPKEDSFVFKFGKTDDAEDAEVTIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMYANRATFV------GKSVVELGSGLGLCGILASYLTDK-RVVITDGDDDTVELLVANCKLN 158
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: G4YRN5_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YRN5_PHYSP) HSP 1 Score: 104 bits (259), Expect = 3.270e-22 Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 22 EELGLSAAALDALKEFAVDTGL-LEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGGGEESEQVDVV--LEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGLCGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLN 495
E+L LS AAL AL+EFA++ G+ +EG D D+R +Q+ +D R + F+F+FG ++ ++ L G+ ++GQTL STGLT+WR + LS FM+++R F G V+ELG+GLGL GI+A+ L QV++TDG ++ E A +LN
Sbjct: 10 EQLMLSGAALAALQEFAIERGIAVEG----DSVDVRKDIQKALDVEPREDSFEFKFGQTQDGADAEITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDFMYQNRGRFA------GKSVIELGSGLGLIGILASYLTDE-QVLITDGDDDTIELLVANCKLN 159
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: M4BI17_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI17_HYAAE) HSP 1 Score: 104 bits (260), Expect = 4.040e-22 Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 1
Query: 22 EELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGG---GEESEQVDVVLEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGLCGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLN 495
E L LS AAL AL+EF V+ G++ D RL +Q+ +D + + F+F+FG G E+ + + L G+ ++GQTL STGLT+WR + LS +M+EHR F G V+ELG+GLGL GI+A+ L QVV+TDG ++ E A +LN
Sbjct: 37 EPLALSGAALAALQEFVVERGIIVEKS---SADTRLDIQKALDIEPKEDSFEFKFGSTENGGEAAPIFIRLNGLRRDIGQTLQSTGLTLWRAGDFLSSYMYEHRGRFA------GKSVIELGSGLGLIGILASYLTDV-QVVITDGDDDTIELLVANCQLN 187
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: A0A3M6VEV1_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEV1_9STRA) HSP 1 Score: 103 bits (257), Expect = 6.250e-22 Identity = 61/158 (38.61%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 22 EELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGGGEESEQVDVVLEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGLCGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLN 495
E+L LS A+L AL+EFA++ G+ + D D+RL +Q +D + + F+F+FG + ++ + L G+ ++GQTL STGLT+WR + LS +M ++R F G ++ELG+GLGL GI+A+ L + VV+TDG ++ E A +LN
Sbjct: 12 EDLTLSVASLAALQEFAIEQGIAM---ISDSSDIRLDIQNALDIEPKEDSFEFKFGTSKGEAEIIIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMSQNRGRFA------GKSIIELGSGLGLVGILASYLTDQ-HVVITDGDDDTIELLTANCQLN 159
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Match: A0A0P1AJ66_PLAHL (Predicted methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ66_PLAHL) HSP 1 Score: 102 bits (255), Expect = 1.200e-21 Identity = 62/161 (38.51%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 19 EEELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDTTERFNEFQFRFGGGEESEQVDVV--LEGINCELGQTLSSTGLTVWRGAEELSRFMWEHRRWFTPSQGQGGLRVVELGAGLGLCGIVAAKLCPRGQVVLTDGGEEFTEEAAAALRLN 495
EE+L LS AAL AL++FA++ G+ + D+RL +Q+ +D + + F+F+FG + E +++ L G+ ++GQTL STGLT+WR + LS +M+++R F G ++ELG+GLGL GI+A+ L + +VV+TDG ++ E A +LN
Sbjct: 9 EEQLSLSDAALIALQQFALEQGIAVDNE---SSDVRLDIQKALDIEPKEDSFEFKFGKSKTREDAEIIIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMYQNRDQFA------GKSIIELGSGLGLIGILASYLTDK-KVVITDGDDKTIELLLANCKLN 159 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig79.19159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig79.19159.1 >prot_S-ischiensis_contig79.19159.1 ID=prot_S-ischiensis_contig79.19159.1|Name=mRNA_S-ischiensis_contig79.19159.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=362bp MQKQAPEEELGLSAAALDALKEFAVDTGLLEGLDLCDDGDLRLKVQECMDback to top mRNA from alignment at S-ischiensis_contig79:98404..101274+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig79.19159.1 ID=mRNA_S-ischiensis_contig79.19159.1|Name=mRNA_S-ischiensis_contig79.19159.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2871bp|location=Sequence derived from alignment at S-ischiensis_contig79:98404..101274+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig79:98404..101274+ >mRNA_S-ischiensis_contig79.19159.1 ID=mRNA_S-ischiensis_contig79.19159.1|Name=mRNA_S-ischiensis_contig79.19159.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2172bp|location=Sequence derived from alignment at S-ischiensis_contig79:98404..101274+ (Schizocladia ischiensis KU_0333)back to top |