mRNA_S-ischiensis_contig78.19055.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig78.19055.1
Unique NamemRNA_S-ischiensis_contig78.19055.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: D8LNK7_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK7_ECTSI)

HSP 1 Score: 677 bits (1746), Expect = 3.020e-223
Identity = 385/679 (56.70%), Postives = 465/679 (68.48%), Query Frame = 1
Query:   31 MQPWQTTVLCAGKYRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAVRASIAGGLARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDS--TVLDPSPECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPG---PCVTG-------------------GRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLEDNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGEDLSSVTGFTSSSRLAEDLRRACMNKTCADCYLVSRNRACFKAHKAVLACRSAVLRRLLAECLGGPQAPGAHSQPASSSAGIPDLRRNAWAASKLAAGSDVSAASADGQLPLVCLPDTISPDVMPVILEYLYTDELNLEPQVLADSYADTYTPPSGSGVTGTGQAGDEVGMGQGRAQADRMDAGEDPKSQSGYPQQLGADGRSGEGQNGTRRQGAWLRGERYAGKAERGILAKLEMFERILEAATALELARLRSLVEWECRNRVNNETV 1995
            MQPW+T V+CAG+YRPRQFEYHPL EDV+VFGTL+GEAVVADV  N V +SI+ GL++DKHDSILGLCW+K++P+RFVVGSSHG LRLC+  +  +V       A  R  E       D+ N+R+   + A    PF   +++ A  G   P + G                   GRIV +F  F+KLTSVH+NSTD  MLASGY+  V+LFD++T QVVR+F+ +H DHINISRFANHSPFVFATSSFD TVKAWDSRVRADNAPIY+C S+ GHVML FSPDDVFLLTSAVDN+V QY+A+DGRLH+ L +P TGL++NFTR+YYTSSGRLILSGSSEEQTVRL+CAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRD+AYPLE+++VDMLQG DGEDLSS+  + SSSRL+ DLRRAC++K  AD +LV+R+R+ F AHKAV+ACRSAVL  LLA+      A  +      ++AG+      A A  K A G +     A      VCLP  +SPD++PVIL YLYTD L   P  L D  A+ Y  P G+  +G G AG EV              G     +S  P+  G   R G G  G         GER +        +K+  +E++LEAA AL L RLRSLVEWECR  VN  T+
Sbjct:    1 MQPWKTKVICAGRYRPRQFEYHPLHEDVVVFGTLRGEAVVADVASNNVCSSISSGLSKDKHDSILGLCWMKRSPSRFVVGSSHGCLRLCDAGAMPSVGTRKASEAAERAEELLQDHHGDL-NSRSNAVQEAM---PFGGRAVSRAAGGVLYPSLGGVENGPGNGPIGLDHRFSEEGRIVTEFSLFEKLTSVHINSTDDQMLASGYTYGVKLFDLSTGQVVRDFKDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLDVPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDTAYPLEIVNVDMLQGTDGEDLSSLMAYASSSRLSADLRRACVDKQGADLFLVARDRSRFLAHKAVVACRSAVLGDLLAKAAA---AASSEEGKGDAAAGV-FSSLEASATKKDAEGGEREDPEAGVTTTCVCLPRAVSPDIVPVILAYLYTDRLQTHPDNLRDGCAEEYVDPGGACSSGGGAAGPEVXXXXXXXXXXXETVG---GCRSSTPR--GGGDRQGVGLGGG--------GERDSCGEGATTRSKVAFYEKVLEAAGALGLHRLRSLVEWECRQLVNTTTI 658          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: A0A6H5K536_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K536_9PHAE)

HSP 1 Score: 654 bits (1688), Expect = 4.070e-206
Identity = 375/697 (53.80%), Postives = 450/697 (64.56%), Query Frame = 1
Query:   31 MQPWQTTVLCAGKYRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAVRASIAGGLARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDS--TVLDPSPECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPGPCVTG--------GRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLEDNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGEDLSSVTGFTSSSRLAEDLRRACMNKTCADCYLVSRNRACFKAHKAVLACRSAVLRRLLAECLGGPQAPGAHSQPASSSAGIPDLRRNAWAASKLAAGSDVSAA------------------------------SADGQLPLVCLPDTISPDVMPVILEYLYTDELNLEPQVLADSYADTYTPPSGSGVTGTGQAGDEVGMGQGRAQADRMDAGEDPKSQSGYPQQLGADGRSGEGQNGTRRQGAWLRGERYAGKAERGILA--KLEMFERILEAATALELARLRSLVEWECRNRVNNETV 1995
            MQPW+T V+CAG+YRPRQFEYHPL+E+V+VFGTL+GEA+VADV  N V +SI+ GL++DKHDSILGLCW+K++P+RF+VGSS+GYLRLC+  +  +V   +   A  R  E       D+ +     S       PF     A   PG    G        GRIV +F  F+KLTSVH+NSTD  MLASGY+  V+LFD+ T QVVR+F+ +H DHINISRFANHSPFVFATSSFD TVKAWDSRVRADNAPIY+C S+ GHVML FSPDDVFLLTSAVDN+V QY+A+DGRLH+ L +P TGL++NFTR+YYTSSGRLILSGSSEEQTVRL+CAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRD+AYPLE+++VDMLQG  GEDLSS+  + SSSRL+ DLRRAC++K  AD +LV+R+R+ F AHKAV+ACRSAVL  LLA+                 SA +    R+         GSD                                   A      VCLP  +SPD++PVIL YLYTD L   P  L D  A  Y  P G   +G G +  EV              G     +S  P + G             R+G  L G    G    G +   K+ ++E++LEAA AL L RLRSLVEWECR  VN  TV
Sbjct:    1 MQPWKTKVVCAGRYRPRQFEYHPLQENVVVFGTLRGEAIVADVASNTVCSSISSGLSKDKHDSILGLCWMKRSPSRFIVGSSYGYLRLCDAGAMPSVGTRNASEAAERAEELLQDHHGDLTSR----SNAVQEAMPFGGMGGAENGPGNGPIGLDHRFSEDGRIVTEFAQFEKLTSVHINSTDDQMLASGYTYGVKLFDLGTGQVVRDFEDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLDVPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDTAYPLEIVNVDMLQGTGGEDLSSLMAYASSSRLSADLRRACVDKQGADLFLVARDRSRFPAHKAVVACRSAVLGGLLAKAXXXXXXXXXXXXXXXGSASLRLTIRSEEGNDCNGKGSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREDPEAAVTTTCVCLPRAVSPDIVPVILAYLYTDRLEAYPDNLRDGCAKEYVDPGGGCSSGGGASEPEVXXXXXXXXXXAEAVG---GCRSSTPMEGGD------------REGVGLGGGGERGSCGEGAMTRNKVALYEKVLEAAGALGLHRLRSLVEWECRQLVNTTTV 678          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: A0A835YWL6_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWL6_9STRA)

HSP 1 Score: 358 bits (919), Expect = 4.670e-110
Identity = 189/368 (51.36%), Postives = 234/368 (63.59%), Query Frame = 1
Query:   31 MQPWQTTVLCAG-KYRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAVRASIAGGLARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDSTVLDPSPECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPGPCVTGGRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNA-----------------PIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLE--DNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQ 1074
            MQ     +LC G KY+PRQFE+HP R DV+VFGTL+GEA++AD   N + + I+ GL+  + DSILGLCWL++   R+VVGSS G        + +    P+   +                 A  +    + C         A  G     G +V  F  F+KLTSVHVN TD +MLASGYS  V ++D+ T  V R F+ IH +HINISRFAN SPF+FATSSFD TVK WD+RVRAD++                 PIY+C S QGHVM+CFSPDD FLLTSAVDN+VTQY+ VDGR H+KL +P T     +NFTRAYYT+SGR ILSGSSEE+ VRLHC+ TGRL H+ EMYPGRKH SLY+Q
Sbjct:    1 MQNLSINLLCPGHKYKPRQFEFHPDRRDVVVFGTLRGEAIIADASSNQIISQISTGLSEHRRDSILGLCWLRRHSLRYVVGSSAGASACRHAAAAIRASRPKGCESSTAXXXXXXXXXXHVRSAGLTLLRESACAAGPHLTVAAACGASPQEGAVVSSFAPFEKLTSVHVNCTDDYMLASGYSHDVAMYDVETGAVCRAFKDIHKNHINISRFANQSPFLFATSSFDKTVKMWDARVRADHSYVCPVPPACPPPPPQTRPIYTCTSAQGHVMVCFSPDDAFLLTSAVDNEVTQYLTVDGRHHLKLDVPSTAANRAENFTRAYYTASGRFILSGSSEERAVRLHCSATGRLAHAVEMYPGRKHDSLYIQ 368          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: A0A4D9D8W8_9STRA (BTB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8W8_9STRA)

HSP 1 Score: 345 bits (884), Expect = 3.000e-95
Identity = 195/431 (45.24%), Postives = 253/431 (58.70%), Query Frame = 1
Query:   31 MQPWQTTVLCAGK-YRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAVRAS----------------IAGG-------------------LARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDSTVLDPSPECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPGPCVTGGRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGR--LHVKLGMPVTGLEDNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGEDLSSVT 1209
            M  W+T VLC GK + PRQFEY P   D +VFGT++GE V+ +   N+  A                 + GG                    A+  +DSILGL WLK+ P++ +VGSS G ++LC+++    +                     +NA                                IV  +E FD+LTS+H N  D  +L SGYS +V+L+D  T  +VR F+ IH+DHINISRFANHSP +FA+SSFD ++K WD R  A   P+Y+ +S+QGHVM+CFSP+DV LL S VDND+ Q  AVDGR  LH+K G+P TGL DN+TRAYYT+SG+ ILSGSSEEQ VR+HCAQTG  + S E YPGR+H SLYVQSLRGDP  D +FSVLVNYRD+++PLE+I +DML       L + T
Sbjct:    1 MNDWRTDVLCEGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAEAWRRKDVETPAGRGMQVRGGDRRRARRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWE--------------------TENA--------------------------------IVLTYEEFDRLTSLHGNCDDSRVLVSGYSHTVQLYDTQTGAIVRRFESIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRC-AGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLK-GLPKTGLADNYTRAYYTASGQAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSVLVNYRDASFPLEIISIDMLGDSHSHTLQAAT 377          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: A0A7S1CMT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMT7_9STRA)

HSP 1 Score: 334 bits (857), Expect = 1.960e-94
Identity = 165/299 (55.18%), Postives = 222/299 (74.25%), Query Frame = 1
Query:  481 GGRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLEDNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGEDLSSVTGFTSSSRLAEDLRRACMNKTCADCYLVSRNR----ACFKAHKAVLACRSAVLRRLL 1365
            GG  V  F  FD+LTSVHVNS+DQ++LASGYSSSVRL+D+ T ++ R F  IHTDHINI+RFA+HSP +FATSSFD T+K WD R+R D  P Y+C+SD+G+V+LCFSPDD++LLTSAVDN++ QY   DGRLH+ L +  TG  DN+TR+YY + G +I+SGSSEE+ +RLHCA TG L+HSA++YPGRK   LY+QSLRG+PH D +F+VL NYRDSA+PLE++ +  +   +G DL+++T    + R  + L  A  +++ AD  LV+R +        AH+++LA R  V RRLL
Sbjct:   22 GGSTVTTFAEFDELTSVHVNSSDQYLLASGYSSSVRLYDLGTGKLARVFSEIHTDHINITRFAHHSPNLFATSSFDRTIKVWDLRMR-DRKPNYTCRSDRGNVILCFSPDDLYLLTSAVDNEIRQYTVQDGRLHLHLDVVKTGRSDNYTRSYYMNGGDVIVSGSSEEKVLRLHCAHTGELLHSADLYPGRKSPLLYIQSLRGNPHRDHEFAVLCNYRDSAFPLEIVKISQVVDAEGNDLTALTSRPGTQRWYDQLVPAVQDESSADMSLVAREKDGTMVRIPAHRSILAARCDVFRRLL 319          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: A0A835ZCY9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY9_9STRA)

HSP 1 Score: 338 bits (867), Expect = 1.470e-92
Identity = 187/330 (56.67%), Postives = 225/330 (68.18%), Query Frame = 1
Query:  484 GRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLE--DNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMY-------------PGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGEDLSSVTGFT-----------------SSSRLAEDLRRACMN--KTCADCYLVSRNRACFKAHKAVLACRSAVLRRLLAE 1371
            GRIV +FE+F+KLTSVHVNST  +MLASGYS  V ++D+ T  VVR F  IH +HINISRFAN SPF+FATSSFD TVK WD+RVRA++ PIY+C S QGHVM+CFSPDDVFLLTSAVDN+V+QY+AVDGRLH+KL +P   L   +NFTR+YYT+SGR I+SGSSEEQ+VRLHCA TGRL  +AEMY             PGRKH SLYVQSLRGDP  D  FSVLVNYRD A+PLE++ +DM    D    ++                      +   LA DL  A  +      D  +V+ + A + AH AVLACRS  L+ LL E
Sbjct:   18 GRIVTEFESFEKLTSVHVNSTSDYMLASGYSHDVAMYDLETGAVVRTFLKIHDNHINISRFANQSPFLFATSSFDKTVKMWDARVRAEHRPIYTCTSSQGHVMVCFSPDDVFLLTSAVDNEVSQYLAVDGRLHLKLDVPSASLNAHENFTRSYYTASGRFIISGSSEEQSVRLHCANTGRLARAAEMYVETSTSTVAARAYPGRKHESLYVQSLRGDPQRDGAFSVLVNYRDPAHPLEIVTIDMGAPCDAGRRAAAPXXXXXXXXXXXXXVHSGQDGACGALATDLACAWQDGGDELLDACVVAADGATYSAHVAVLACRSPALKELLQE 347          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: A0A4D8Y5A5_SALSN (Uncharacterized protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Y5A5_SALSN)

HSP 1 Score: 273 bits (699), Expect = 5.160e-78
Identity = 154/378 (40.74%), Postives = 218/378 (57.67%), Query Frame = 1
Query:   70 YRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAVRASIAGGLARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDSTVLDPSPECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPGPCVTGGRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLEDNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGEDLSS 1203
            +RPRQFEYHP    ++VFGTL GE VV + +   +   I    A +   S+LGLCWLK+ P++ + GS +G LRL ++                    MP            S G S                     G ++  F+ FD+LTSVHVNSTD+  LASGYS +V L+D+++ + +++F  +H +HIN+ +F+NHSP +FATSSFD  VK WD R +  N P Y+  S +G+VM+CFSPDD +LL SAVDN+V Q +AVDGRLH+  G+  TG   N+TR+YY +    ++SGS +E  VR+ CA TGR +    +       S++VQSLRGDP  DF  SVL  Y   +   E++ V++L+ GD +  +S
Sbjct:   93 FRPRQFEYHPTDSRLMVFGTLDGEVVVINHESEKIVNYIPSLGAMN---SVLGLCWLKKYPSKLIAGSDNGSLRLYDIQH------------------MPTT----------SRGMSQ------------------NRGNVI--FDEFDQLTSVHVNSTDELFLASGYSKNVALYDISSGKRLQDFADMHQEHINVVKFSNHSPSLFATSSFDQNVKMWDIRQKP-NQPCYTASSSRGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRLHLNFGIASTGSSQNYTRSYYMNGRDYVISGSCDEHVVRVCCANTGRRLRDVSLEGKGAGSSMFVQSLRGDPFRDFSMSVLAAYIRPSSNSEIVKVNLLESGDSDKSNS 418          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: UPI001CB98834 (uncharacterized protein LOC122593544 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB98834)

HSP 1 Score: 278 bits (712), Expect = 4.140e-76
Identity = 154/375 (41.07%), Postives = 213/375 (56.80%), Query Frame = 1
Query:   67 KYRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAVRASIAGGLARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDSTVLDPSPECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPGPCVTGGRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLEDNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGE 1191
            K+RPRQFEYHP   +++V GTL GE VV + +   +   I    A +   S+LGLCWLK+ P++F+ GS +G L+L ++      PS   +  R G +                                               F+ FD+LTSVHVNS D+  LASGYS  V L+D+ T + ++ F  +H +HIN+ +FANHSP +FATSSFD  VK WD R +  ++P Y+  S +G+VM+CFSPDD +LL SAVDN+V Q +AVDGRLH+  G+P TG   N+TR+YY +    ILSGS +E  VR+ CAQTGR +    +       S++VQSLRGDP  DF  S+L  Y   +   E++ V+ML   D +
Sbjct:  445 KFRPRQFEYHPTNSNLMVIGTLDGEVVVINHESEKIVRYIPSHGAMN---SVLGLCWLKKYPSKFIAGSDNGLLKLYDIQHI---PSTHSSVYRSGASAS---------------------------------------------FDEFDQLTSVHVNSLDELFLASGYSKHVSLYDICTGKRLQVFTDMHQEHINVVKFANHSPSMFATSSFDHDVKMWDLR-QNPHSPCYTSSSGRGNVMVCFSPDDHYLLASAVDNEVKQLLAVDGRLHLDFGIPPTGSSQNYTRSYYMNGRDYILSGSCDEHVVRICCAQTGRRLRDISLEGKSSGSSMFVQSLRGDPFRDFNLSILAAYLSPSSIPEIVKVNMLTSKDAD 767          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: A0A7S0NCM1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NCM1_9CRYP)

HSP 1 Score: 266 bits (681), Expect = 5.900e-76
Identity = 149/381 (39.11%), Postives = 207/381 (54.33%), Query Frame = 1
Query:   46 TTVLCAGKYRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAVRASIAG-GLARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDSTVLDPSPECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPGPCVTGGRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLEDNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGD 1185
            T ++     RPRQFEYHP + + +V GT+ GE +V     N +  S+ G   A     SILGLCWL+      + GS  G ++L +++    + +P                                                      + K+E F+ LTS+H++  D   L SGYS+ V L+D+   + ++ F+ +H+ HIN+ +FAN SP +FATSSFD  VK WD R  A N PI++C+SDQG+VM+CFSPDD +LL+SAVDN+V QY AVDGRL +K  +   G E N+TR+YY +    I+SGS EE  VR++CA+TGR      +  G    SLYVQSLRGDP H F  SVLV Y     P E++ V++L   D
Sbjct:   64 TRMIAPSHLRPRQFEYHPTKPEELVIGTVNGEVIVL----NHLTGSVLGQATAAGPPHSILGLCWLRLNDGLLISGSDSGNIQLYDVNLMKHNRTPT-----------------------------------------------------IYKYENFEHLTSLHIDCLDDKFLVSGYSNDVALYDLKVGKKIQTFKSLHSQHINVLKFANFSPSLFATSSFDKDVKMWDLREGA-NRPIFTCRSDQGNVMVCFSPDDRYLLSSAVDNEVRQYTAVDGRLTMKFDILSLGSEHNYTRSYYMNGSDYIISGSCEESVVRIYCARTGRFFRDFTIDRGSGPASLYVQSLRGDPFHPFHLSVLVAYNHPLAPSEMLEVNLLSRPD 386          
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Match: A0A7S3YEB9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YEB9_9EUKA)

HSP 1 Score: 267 bits (683), Expect = 2.740e-75
Identity = 163/439 (37.13%), Postives = 235/439 (53.53%), Query Frame = 1
Query:   55 LCAGKYRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAV--RASIAGGLARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDSTVLDPSPECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPGPCVTGGRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQGIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQGHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLEDNFTRAYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGEDLSSVTGFTSSSRLAEDLRRACMNKTCADCYLVSRNRACFKAHKAVLACRSAVLRRLL 1365
            LC+ + +PRQFE+HP   +++  GT +G+ VV D + N +  R        R +  SIL L WL++     + GSS G  +L  LD+             KG   M                       YR        G  +T           +++TS+H N  DQ ++ SGY+ +V +FD+ T Q VRE+ GIH DHINI RFAN+ P +  T SFD T+K WD+R  A   PI+   S  G+VM+CFSPDD++ L SAVDN+V QY  VDG LH+K  +       N+TR+YY + G L++SGSS +  V +  + TG++I S  MY GR+H +LY+QSLRG+P +  +F VLV YR S  P EV+ VD+ +   G+ +       ++ +L +D  R   N +  D  LV+ +    +AHKA+L+ R    RR L
Sbjct:   27 LCSSELQPRQFEFHP-ELNIMAVGTCEGDVVVLDWEKNQILQRRIFEAEEDRRERRSILALSWLRKNSRLLLAGSSSGKAKLYRLDN-------------KGALEMAME--------------------YRE-------GEPLT-----------EEMTSIHCNCVDQLLVTSGYTKNVNIFDVETGQEVREYNGIHEDHINICRFANNLPDILLTCSFDNTIKLWDNRCSAQR-PIHVSNSKGGNVMVCFSPDDMYFLASAVDNEVKQYTTVDGSLHLKYDIEPINSSINYTRSYYANDGDLVVSGSSNDDVVHICSSSTGKIIESIRMYEGRRHPNLYIQSLRGNPINANRFGVLVCYRYSDAPYEVVDVDLNRDSKGQPVHLPYSIAAAQQLTQDFARQIDNPSFYDVELVADDGRRLRAHKAILSPRWPWFRRRL 412          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig78.19055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNK7_ECTSI3.020e-22356.70BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K536_9PHAE4.070e-20653.80BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YWL6_9STRA4.670e-11051.36Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A4D9D8W8_9STRA3.000e-9545.24BTB domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S1CMT7_9STRA1.960e-9455.18Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835ZCY9_9STRA1.470e-9256.67BTB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D8Y5A5_SALSN5.160e-7840.74Uncharacterized protein n=1 Tax=Salvia splendens T... [more]
UPI001CB988344.140e-7641.07uncharacterized protein LOC122593544 n=1 Tax=Erige... [more]
A0A7S0NCM1_9CRYP5.900e-7639.11Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S3YEB9_9EUKA2.740e-7537.13Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig78contigS-ischiensis_contig78:36432..43324 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score682.9
Seed ortholog evalue1.5e-193
Seed eggNOG ortholog2880.D8LNK7
Preferred nameLRRIQ1
KEGG koko:K14963
KEGG Pathwayko04934,map04934
EggNOG free text desc.axoneme assembly
EggNOG OGsCOG4886@1,KOG0531@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Hectar predicted targeting categoryother localisation
Exons12
Model size3551
Cds size2088
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig78.19055.1prot_S-ischiensis_contig78.19055.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig78 36462..41386 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817240.8265347-UTR-S-ischiensis_contig78:36431..364611622817240.8265347-UTR-S-ischiensis_contig78:36431..36461Schizocladia ischiensis KU_0333UTRS-ischiensis_contig78 36432..36461 +
1695740961.6833289-UTR-S-ischiensis_contig78:36431..364611695740961.6833289-UTR-S-ischiensis_contig78:36431..36461Schizocladia ischiensis KU_0333UTRS-ischiensis_contig78 36432..36461 +
1622817240.9935393-UTR-S-ischiensis_contig78:41386..425891622817240.9935393-UTR-S-ischiensis_contig78:41386..42589Schizocladia ischiensis KU_0333UTRS-ischiensis_contig78 41387..42589 +
1695740961.819947-UTR-S-ischiensis_contig78:41386..425891695740961.819947-UTR-S-ischiensis_contig78:41386..42589Schizocladia ischiensis KU_0333UTRS-ischiensis_contig78 41387..42589 +
1622817241.005948-UTR-S-ischiensis_contig78:42861..429371622817241.005948-UTR-S-ischiensis_contig78:42861..42937Schizocladia ischiensis KU_0333UTRS-ischiensis_contig78 42862..42937 +
1695740961.8322656-UTR-S-ischiensis_contig78:42861..429371695740961.8322656-UTR-S-ischiensis_contig78:42861..42937Schizocladia ischiensis KU_0333UTRS-ischiensis_contig78 42862..42937 +
1622817241.018173-UTR-S-ischiensis_contig78:43170..433241622817241.018173-UTR-S-ischiensis_contig78:43170..43324Schizocladia ischiensis KU_0333UTRS-ischiensis_contig78 43171..43324 +
1695740961.8469257-UTR-S-ischiensis_contig78:43170..433241695740961.8469257-UTR-S-ischiensis_contig78:43170..43324Schizocladia ischiensis KU_0333UTRS-ischiensis_contig78 43171..43324 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817240.8417482-CDS-S-ischiensis_contig78:36461..365671622817240.8417482-CDS-S-ischiensis_contig78:36461..36567Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 36462..36567 +
1695740961.69972-CDS-S-ischiensis_contig78:36461..365671695740961.69972-CDS-S-ischiensis_contig78:36461..36567Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 36462..36567 +
1622817240.8539693-CDS-S-ischiensis_contig78:36924..370691622817240.8539693-CDS-S-ischiensis_contig78:36924..37069Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 36925..37069 +
1695740961.715034-CDS-S-ischiensis_contig78:36924..370691695740961.715034-CDS-S-ischiensis_contig78:36924..37069Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 36925..37069 +
1622817240.8689892-CDS-S-ischiensis_contig78:37674..378071622817240.8689892-CDS-S-ischiensis_contig78:37674..37807Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 37675..37807 +
1695740961.7290945-CDS-S-ischiensis_contig78:37674..378071695740961.7290945-CDS-S-ischiensis_contig78:37674..37807Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 37675..37807 +
1622817240.8854196-CDS-S-ischiensis_contig78:37918..381161622817240.8854196-CDS-S-ischiensis_contig78:37918..38116Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 37919..38116 +
1695740961.7417846-CDS-S-ischiensis_contig78:37918..381161695740961.7417846-CDS-S-ischiensis_contig78:37918..38116Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 37919..38116 +
1622817240.9025674-CDS-S-ischiensis_contig78:38551..386531622817240.9025674-CDS-S-ischiensis_contig78:38551..38653Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 38552..38653 +
1695740961.7515957-CDS-S-ischiensis_contig78:38551..386531695740961.7515957-CDS-S-ischiensis_contig78:38551..38653Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 38552..38653 +
1622817240.9187698-CDS-S-ischiensis_contig78:38872..389611622817240.9187698-CDS-S-ischiensis_contig78:38872..38961Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 38873..38961 +
1695740961.7610502-CDS-S-ischiensis_contig78:38872..389611695740961.7610502-CDS-S-ischiensis_contig78:38872..38961Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 38873..38961 +
1622817240.9387553-CDS-S-ischiensis_contig78:39171..393211622817240.9387553-CDS-S-ischiensis_contig78:39171..39321Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 39172..39321 +
1695740961.7708402-CDS-S-ischiensis_contig78:39171..393211695740961.7708402-CDS-S-ischiensis_contig78:39171..39321Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 39172..39321 +
1622817240.9530578-CDS-S-ischiensis_contig78:39820..400541622817240.9530578-CDS-S-ischiensis_contig78:39820..40054Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 39821..40054 +
1695740961.7841997-CDS-S-ischiensis_contig78:39820..400541695740961.7841997-CDS-S-ischiensis_contig78:39820..40054Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 39821..40054 +
1622817240.967389-CDS-S-ischiensis_contig78:40260..406661622817240.967389-CDS-S-ischiensis_contig78:40260..40666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 40261..40666 +
1695740961.7962546-CDS-S-ischiensis_contig78:40260..406661695740961.7962546-CDS-S-ischiensis_contig78:40260..40666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 40261..40666 +
1622817240.9793248-CDS-S-ischiensis_contig78:40861..413861622817240.9793248-CDS-S-ischiensis_contig78:40861..41386Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 40862..41386 +
1695740961.8083906-CDS-S-ischiensis_contig78:40861..413861695740961.8083906-CDS-S-ischiensis_contig78:40861..41386Schizocladia ischiensis KU_0333CDSS-ischiensis_contig78 40862..41386 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig78.19055.1

>prot_S-ischiensis_contig78.19055.1 ID=prot_S-ischiensis_contig78.19055.1|Name=mRNA_S-ischiensis_contig78.19055.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=696bp
MQPWQTTVLCAGKYRPRQFEYHPLREDVIVFGTLKGEAVVADVKDNAVRA
SIAGGLARDKHDSILGLCWLKQTPNRFVVGSSHGYLRLCELDSTVLDPSP
ECAFARKGENTMPFRADVQNARARCSEGASTGCPFYRTSLAFALPGPCVT
GGRIVRKFETFDKLTSVHVNSTDQHMLASGYSSSVRLFDMATSQVVREFQ
GIHTDHINISRFANHSPFVFATSSFDCTVKAWDSRVRADNAPIYSCKSDQ
GHVMLCFSPDDVFLLTSAVDNDVTQYMAVDGRLHVKLGMPVTGLEDNFTR
AYYTSSGRLILSGSSEEQTVRLHCAQTGRLIHSAEMYPGRKHGSLYVQSL
RGDPHHDFQFSVLVNYRDSAYPLEVIHVDMLQGGDGEDLSSVTGFTSSSR
LAEDLRRACMNKTCADCYLVSRNRACFKAHKAVLACRSAVLRRLLAECLG
GPQAPGAHSQPASSSAGIPDLRRNAWAASKLAAGSDVSAASADGQLPLVC
LPDTISPDVMPVILEYLYTDELNLEPQVLADSYADTYTPPSGSGVTGTGQ
AGDEVGMGQGRAQADRMDAGEDPKSQSGYPQQLGADGRSGEGQNGTRRQG
AWLRGERYAGKAERGILAKLEMFERILEAATALELARLRSLVEWECRNRV
NNETVSTLVYFDVYMTCTTPLLQVGRVRCSSRPHVYFVGTSSFCC*
back to top

mRNA from alignment at S-ischiensis_contig78:36432..43324+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig78.19055.1 ID=mRNA_S-ischiensis_contig78.19055.1|Name=mRNA_S-ischiensis_contig78.19055.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6893bp|location=Sequence derived from alignment at S-ischiensis_contig78:36432..43324+ (Schizocladia ischiensis KU_0333)
GCAAAAAGGGAGCAAAAAGGGACGGGGACGATGCAGCCGTGGCAGACCAC GGTCTTGTGTGCAGGGAAATATCGGCCGCGCCAGTTCGAGTATCACCCTC TCCGAGAGGATGTCATTGTCTTTGGGACCCTCAAAGGTGATATGCAAGCT TTTCGTCCACTCGCCGTCCCTCCGCGTCAATAACTGTCGCCACTCCCGTT TGGGTTACGCATGGAGTGAGACAGCTTGGTACTTGCTGTACTCACGTTGA AGAACCTCTGCCCGTTCCATGATAGAGCACGCAATTGCGAGTTCAGTTTC TCTTGAGCAGAGCGAGTTTAACACACATCTGGAACCCAGCACAGAGCAGC GTGCTAGCGACCACTTTTGAAGAAATTTTTGCACGCCCATTAGGTCACCC ATAGGTGAGGTAAGTGGTTGCATGTTGTACTTATGCATCATGCCACTGCA GCGTGCTGACGGTGCATTCGTTAAACATGCATTTTGTCTGCAGGCGAGGC TGTGGTGGCTGATGTGAAGGATAATGCAGTGCGTGCTTCCATTGCCGGGG GATTGGCGAGGGATAAACACGACTCCATCCTGGGGCTTTGCTGGCTCAAG CAGACGCCAAACCGCTTCGTTGTGGGCAGCAGCCACGGGTAAGACAGGGC CAGGGCCAGTGGTTTCGGGGGGCTCCAAACCCATTCCAGTGTATGTACTC GTACAAGCACCGGTGCCGGAGCCAATAAACAAAAGTGCGTCATTCAAGCA TGCAGGCACCCGTGGATCAACAAGACAAGCATAGTCTCTGTGCCGGGACG AATTTTTGTGCGTTGTATGTGCGTTTTCATATGCATGGTGCAGGCATGTT TGGGCGTTTGTGGTTGCAGACCGGCAGGCCCCTGCTCTGCACTCTTCACT TGGCTCATTCCGACTTGCTGTGCACACTGTGCTGGTACTACTTGCTGTAC TATGCATGTACTCACGTTGTGCGGTTGACCACGTGCCGGCCCTTTTCGTG TGCCGTTTTGTGCATAGATAGTATATGTGCTCACGTTGTGCTTGCCGTAG TCCCGAGACCATTGACCACGCGCCGTTGACGGCGGAGCAAATGCAACATT TATGTAATTTTGGCACCTCAACGAGCGTGTGAACAACGTGAGACCAGTTT ATGGGTCTCTGACGAACTGTTTGACTCTGCTCTTTGTGACGTGTCAAACG TTTTGTGCTCCCCCGTGTGCATTGACAACTTGCTGTATTGCAGGTACCTG CGTCTCTGTGAGCTGGATTCCACGGTGTTGGACCCGAGCCCCGAATGCGC TTTCGCCCGGAAGGGCGAGAACACCATGCCATTCCGAGCAGACGTGCAAA ATGCCCGGGCACGGTGCAGCGAAGGTGTGTGCTTGAATACGCTTTGTTCC CAGCCCTATGCTTGGAAGTGGTAGCCACAGTGCAGCGCCGTGAGGGCACT CTCTGACTGCGATAGCTTGGCCCCAGGCCCACTGTAGGCCAGCACTGGTT GCCCTTTTTACCGAACCTCGCTTGCATTTGCTTTACCCGGACCTTGTGTG ACAGGGGGGCGAATTGTGCGCAAGTTTGAGACATTTGACAAGCTGACTTC AGTGCACGTCAACTCCACGGATCAGCACATGCTGGCTTCGGGGTACAGCT CCAGTGTAAGGCTGTTTGACATGGCCACATCACAGGTGAGATTGCCCAGC TGGAATGGATTGATGGGAGCACACATCTGGGAACGCAATATGTACAGAGC TATGGATTGTACTCGAGTACTTACTCTAGAGACGTTGACATACAGGCTAC ATTCTCCTGGTGGACGGCAGTCTTCCATCTATGGGCCTGCCACCCATACC GTAGGTTGCATTGAAAGGCGCGGCTGATGAGTAGGTATGAGTCGATATGC CCCGGCGGAGCAGGCGTATGAGAGGCAGGCGCTCACTCAGTAGCTACAGT ACCCTGTCCTGTTGGACGGCCGTTTCGGCCGACTAAGTTCCAGAAGGCTA TGCGCCTCTGTGTTATGAATGCTTCGGCGTTCGATTTAGCAGAGACAACC ACGATACCAGTGCCAGCCAGCATTCGTCCGAAGGTCAACGGTGACTGCAA CTCTTGCCTGCCCCCCGCAGGTGGTGCGTGAGTTTCAAGGTATCCACACG GACCACATCAACATCAGCCGGTTTGCCAATCACAGCCCGTTCGTGTTCGC CACATCAAGTTTTGACTGCACGGTAAGGGTCTACCAGGTCATTGTGCTTG TTGAGAGATGCCTGTCAGGCGCGGAACCGGTTTGGATGAGCCTGGATGCA ACTGCGGCGCCATGATGCCATGCACCATATAGATACTGCTTGCCCCCTGC ATTCGTACGCGCACTCTGTGGGGGAGAAAGGGAAACGGTCGTTCCTGCGG TGACTAAGAAAGGAAACAAACGCATGCGCCCACGCTCTCAGGTCAAGGCC TGGGACTCCCGTGTGCGAGCGGACAACGCCCCCATCTACTCGTGCAAGTC TGACCAGGGGCATGTGATGCTCTGTTTCAGGTCAGTTCCGGTGGTGAAGT GCCTGGCCACTCGCCAAGATAACTGTTGGGGTAGGTGCTGAATAGAGGGA ATTTTGCGGGGCTTCGTTTACACATATTGGTTTCCATTGCAAGCTTGTCC TGAAAGGTGGTGAGCAGTTGCCGCTGGGGGCCCGGGTTGTGAAGGGGCAC CTAACCCGCCCGCGCATCGCCTGTCCCCCCGTGTGCGCAGCCCGGACGAC GTGTTCCTCCTGACATCGGCCGTGGACAACGATGTTACCCAGTACATGGC AGTGGATGGTCGCCTGCACGTGAAGCTTGGCATGCCAGTCACTGGCCTGG AGGACAACTTCACACGGGCCTACTACACCTCCAGTGGAAGGTGATGATGG AGTAATAGGGGCGCTACTACGGAAGTATGAGGCCCAAACCCATGTTTATG CATTTCCTGCTGGTTCCACGGACCACAGTGGCTGCAGTGTTATACTCGTA AGTACGTGTTCATGCTTCGGAGAATGCTCGCTTTTTCCAAAGCTAATGGC ACAGTGCCCACTGTGGAAGCATTTCGTAGGTATGCGCGAGTACAGCTGGT GATTTGATGTCCGTTCTGTGCGGTCTTCACGGGCCCTTCACGTAATTTTA TGGTGTACTCCGAAGTAGTCGCGTTGTGTTTGCCACATCCCTGGTAGCAT CGACGACTGCACTTTGAAGTCAGTGTCTTGTTTGAGCTTTCTCCATTGAT GTGTCATTTCACCTCATGCTGCCCACACATGCTGCCCTTGCTAAGAAACC CCTGTTTTGGTGTCAACGCCGTTGCGCTGCCGTCTACTGTTGAATGAATA CCTACGTGCCTCTTGGTGTGCCATATCCACGGGATCCAGGCTCATCCTTT CAGGGTCATCAGAGGAGCAAACAGTCCGGTTGCATTGCGCGCAGACGGGC CGCCTCATCCACTCTGCGGAGATGTATCCCGGGCGCAAGCATGGTTCACT GTACGTACAGTCCCTCCGGGGTGACCCCCACCATGACTTCCAGTTCAGCG TTCTCGTCAACTACCGTGACAGTGCCTACCCGCTGGAGGTCATTCACGTG GACATGCTGCAGGGGGGCGACGGGTGAGATGCTTTGGTTTGCTGCATGTT GTCCCTGCCTGTAGAGTACGTAAGGGCAACGCCTGGCAATTCACCAATGA GCTCATGCGGGGTCATGACTCCCGGTTTGTGACGTATTTTGCGCTTCTGG AGGACCATGCGGCCTATGCACCTTGCGCGCTTGCTGACACGCTTGGTATT CATTCTCTTCTGCCATGGCCTTTGCTCAGGGAGGATCTGAGCAGTGTGAC AGGGTTCACATCATCCTCGCGCTTGGCTGAGGATCTGAGGCGGGCGTGCA TGAACAAGACATGTGCGGACTGCTACCTCGTCTCCCGCAACCGCGCCTGT TTCAAAGCCCACAAGGCTGTACTTGCCTGCCGCAGCGCCGTGCTCCGCCG GCTCTTGGCGGAATGCCTTGGCGGCCCGCAAGCACCAGGGGCACATTCAC AGCCAGCCTCCTCCTCTGCGGGCATTCCTGACCTTCGGCGGAATGCGTGG GCCGCGAGCAAGTTGGCGGCGGGCTCAGACGTCTCTGCGGCGAGCGCGGA TGGGCAGCTACCGCTTGTGTGCCTCCCAGACACAATTTCTCCGGACGTCA TGCCGGTGATCCTGGAGTATCTCTACACGGACGAGGTCAGTAGGATGTGG TGTTGCGCTGCATCTACTTCTCTATGGAGATGGTCACGGTGCGGAAGATG ATGTGTGTAAGTAAATACTTCCAAGTACTACATAGTATGATGATTCGGCT GTTTAGATAAGGTCTCCTCAAGCCTTTATGTCACCTGGCAAGAGACACGT CCTTGGCCCAATCTGTCGGCGTGCCTGCAGCTCAACTTGGAGCCCCAAGT CTTGGCGGACAGTTACGCGGACACCTACACCCCCCCAAGTGGCTCGGGAG TGACTGGCACGGGACAGGCAGGGGATGAGGTGGGGATGGGCCAAGGGCGT GCTCAAGCAGATCGCATGGACGCGGGAGAGGACCCGAAATCTCAATCCGG GTATCCGCAACAGCTGGGAGCGGACGGCAGGAGTGGCGAAGGGCAAAACG GAACCCGCAGGCAGGGAGCCTGGCTGAGAGGCGAGAGGTATGCTGGAAAG GCAGAGAGGGGCATATTGGCCAAGCTGGAGATGTTTGAGAGGATACTTGA GGCAGCCACGGCGCTGGAGCTAGCCAGGCTGCGCAGCCTCGTGGAGTGGG AGTGCCGCAACCGTGTCAACAACGAGACTGTGAGTACCCTAGTCTACTTT GATGTGTACATGACATGTACCACACCCCTGCTCCAAGTTGGCCGTGTCAG ATGCTCGTCCCGTCCACACGTATACTTCGTAGGTACGAGTAGCTTTTGCT GCTGACGCCAGGGATGTATATATATACTACTATGTACCCACATTGTGCTT GCTGTAGGCCCGAGACCATTGACAGCACCCCCCGATTGAGACGGAGCAGG CATGGAGGTGGAAAATGTATCATGTACGGTACAGTCCATAACTTACGCGG GCCGAATGAAGAACGGTTCGTATGTATCCTATTCCAATGGGAGCCATATC CACCGTTCTCATTAAGAATGGTTCGGATGTGTTTTACGCAAATGGAGGCC ATATCCACCGCGCTCTTGGTCCTGTGGTTACACTTGTTGCCCCAGCATGT TGGCACATTATTTGGGCTGAACAGTAGAGAGGTCATTTGGGCATGGAGGG GCTGCTTGGCGGGAAATCTGATGGGCTCAGGCGATTCCGCGTGGCCAAAG TAGGTTGCGTGCGCAAGTTGAGCAACAGCATACCTATGAAGCCCCCGAAT GGCACTAAACTGAAGTTGGTCTGGTGACAAAGCTGAATGACCTTGCCCTT TGCACCTAGAATCTCCTGAGGCCGACATTCTTTCCCCCACAGCGCATCCT GTGCAGCGTGTTCCAGACCCGTTGGGACGTGTAAGCAGCCTGGGTCGCCG GGCCACCCACCGACACCGCAACGCGCCGCATGGCCTGGAAATGCAGGCTC AGCTGCTGAAAACGAGGAGGCTCGCAGGCCCGTAAATTAGTTTGGGGGCA GCACCTGGTGTGTGGTGGGCGGCATGCCATCACAATCCCCTCGAACAGTT GGCAGGTTTCTGCTGATCACCCCAAGTTTGATGCCCTGGCCACGTGTACC ACCGTATGGGAAACTCTGGCCCGGTGTGCGAACATGAGCTCCCATCTGTC CAAGCAAGTCAAGGCGATTTAGTCGCAGTATATGCACTGTACTCAGGTGC GTACCACAGTCCCGATGTGGTACACAGCCCCACTACAAGCAAGTCTGTGG TCGAGGATACTACTTGGCTTGACTGTTGCTGTGCCGCAAATGCCCAGGTC TCAACGCCAAGCACCCCGGCTAGCCTCAGTATGCGTTTACATGGCATGTT TGTCGGTCGACGAACAGGTTGTCTTCGTGGTAGGCATTGGACTGCGGCAA GGGGCAGAGCAGCTGGTGCGATACTGTGTGCACTACCTGGTGGCGCATGT GCGCATGGTCCAGCAGCTTCATGGCCAGGATTGCCTGCCGCAGGAGGTGG AGGAGCAGGTGAGACTGCCATTAGCCTGCCATTCCTATAGCCTCCGTGAG CCAGGGTCGGGAGGAGGTTTTGCTCCGTTCTTGGAAGAGGCGGGTGGTCA ATGTTCTCCTGGCCAGGACAAGCACCATGTGGTACAAGTACAGCAGTCAT ATGTATTTTCAGAAATCAGAAAAAAACTACTTTTTCAGTTGGCTACAGTA CACGTGGGGAGAGGAGACTGGCGATAAGTTACTTGCAGGTATTGACAAAC CATGCTCGGACTCGCTTCCGTTACATGCAGGTCGTTCTGGAACGAAGAAG ACGGCTGTTTCCCCTGAAGTGTCACTTCTGTGGTCGGCTGGCACCAATGG AGACGGGTGAGCAGGTCACAAGGACTTGTCTGATGTTTGCGGCGTGTACC AGTACTTCAATCATGTGCGGGTTCTCTTCATGCAAGCGATCCTTGTGGCC GTGCTCTTCACAGTAAGTACCTTGTTCCATCTTCATTTGAAGTCGGGTTG GGCACAATGTTTCCAGCTCATATTCGACCCAGGGCACCCTTTGCCACACT GTCCCACAACTACCAATCTACCCTGCCGCTTCTTGTCAGCACACGGCATG CAACAGCAGGACGTGCAGGACGTTGACATCGCTGAGGACCAGTCAAATAG CGCTCAGGGGGATGATATAGAGCACGACGATGAGGTAGAGGCAGAGGCAG AGGCGGGGCTGGCAGAGGAAGACAATCACGAGCAGCTGCAGGA
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig78:36432..43324+

>mRNA_S-ischiensis_contig78.19055.1 ID=mRNA_S-ischiensis_contig78.19055.1|Name=mRNA_S-ischiensis_contig78.19055.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4176bp|location=Sequence derived from alignment at S-ischiensis_contig78:36432..43324+ (Schizocladia ischiensis KU_0333)
ATGCAGCCGTGGCAGACCACGGTCTTGTGTGCAGGGAAATATCGGCCGCG
CCAGTTCGAGTATCACCCTCTCCGAGAGGATGTCATTGTCTTTGGGACCC
TCAAAGATGCAGCCGTGGCAGACCACGGTCTTGTGTGCAGGGAAATATCG
GCCGCGCCAGTTCGAGTATCACCCTCTCCGAGAGGATGTCATTGTCTTTG
GGACCCTCAAAGGCGAGGCTGTGGTGGCTGATGTGAAGGATAATGCAGTG
CGTGCTTCCATTGCCGGGGGATTGGCGAGGGATAAACACGACTCCATCCT
GGGGCTTTGCTGGCTCAAGCAGACGCCAAACCGCTTCGTTGTGGGCAGCA
GCCACGGGCGAGGCTGTGGTGGCTGATGTGAAGGATAATGCAGTGCGTGC
TTCCATTGCCGGGGGATTGGCGAGGGATAAACACGACTCCATCCTGGGGC
TTTGCTGGCTCAAGCAGACGCCAAACCGCTTCGTTGTGGGCAGCAGCCAC
GGGTACCTGCGTCTCTGTGAGCTGGATTCCACGGTGTTGGACCCGAGCCC
CGAATGCGCTTTCGCCCGGAAGGGCGAGAACACCATGCCATTCCGAGCAG
ACGTGCAAAATGCCCGGGCACGGTGCAGCGAAGGTGTACCTGCGTCTCTG
TGAGCTGGATTCCACGGTGTTGGACCCGAGCCCCGAATGCGCTTTCGCCC
GGAAGGGCGAGAACACCATGCCATTCCGAGCAGACGTGCAAAATGCCCGG
GCACGGTGCAGCGAAGGTGCCAGCACTGGTTGCCCTTTTTACCGAACCTC
GCTTGCATTTGCTTTACCCGGACCTTGTGTGACAGGGGGGCGAATTGTGC
GCAAGTTTGAGACATTTGACAAGCTGACTTCAGTGCACGTCAACTCCACG
GATCAGCACATGCTGGCTTCGGGGTACAGCTCCAGTGTAAGGCTGTTTGA
CATGGCCACATCACAGGCCAGCACTGGTTGCCCTTTTTACCGAACCTCGC
TTGCATTTGCTTTACCCGGACCTTGTGTGACAGGGGGGCGAATTGTGCGC
AAGTTTGAGACATTTGACAAGCTGACTTCAGTGCACGTCAACTCCACGGA
TCAGCACATGCTGGCTTCGGGGTACAGCTCCAGTGTAAGGCTGTTTGACA
TGGCCACATCACAGGTGGTGCGTGAGTTTCAAGGTATCCACACGGACCAC
ATCAACATCAGCCGGTTTGCCAATCACAGCCCGTTCGTGTTCGCCACATC
AAGTTTTGACTGCACGGTGGTGCGTGAGTTTCAAGGTATCCACACGGACC
ACATCAACATCAGCCGGTTTGCCAATCACAGCCCGTTCGTGTTCGCCACA
TCAAGTTTTGACTGCACGGTCAAGGCCTGGGACTCCCGTGTGCGAGCGGA
CAACGCCCCCATCTACTCGTGCAAGTCTGACCAGGGGCATGTGATGCTCT
GTTTCAGGTCAAGGCCTGGGACTCCCGTGTGCGAGCGGACAACGCCCCCA
TCTACTCGTGCAAGTCTGACCAGGGGCATGTGATGCTCTGTTTCAGCCCG
GACGACGTGTTCCTCCTGACATCGGCCGTGGACAACGATGTTACCCAGTA
CATGGCAGTGGATGGTCGCCTGCACGTGAAGCTTGGCATGCCAGTCACTG
GCCTGGAGGACAACTTCACACGGGCCTACTACACCTCCAGTGGAAGCCCG
GACGACGTGTTCCTCCTGACATCGGCCGTGGACAACGATGTTACCCAGTA
CATGGCAGTGGATGGTCGCCTGCACGTGAAGCTTGGCATGCCAGTCACTG
GCCTGGAGGACAACTTCACACGGGCCTACTACACCTCCAGTGGAAGGCTC
ATCCTTTCAGGGTCATCAGAGGAGCAAACAGTCCGGTTGCATTGCGCGCA
GACGGGCCGCCTCATCCACTCTGCGGAGATGTATCCCGGGCGCAAGCATG
GTTCACTGTACGTACAGTCCCTCCGGGGTGACCCCCACCATGACTTCCAG
TTCAGCGTTCTCGTCAACTACCGTGACAGTGCCTACCCGCTGGAGGTCAT
TCACGTGGACATGCTGCAGGGGGGCGACGGGCTCATCCTTTCAGGGTCAT
CAGAGGAGCAAACAGTCCGGTTGCATTGCGCGCAGACGGGCCGCCTCATC
CACTCTGCGGAGATGTATCCCGGGCGCAAGCATGGTTCACTGTACGTACA
GTCCCTCCGGGGTGACCCCCACCATGACTTCCAGTTCAGCGTTCTCGTCA
ACTACCGTGACAGTGCCTACCCGCTGGAGGTCATTCACGTGGACATGCTG
CAGGGGGGCGACGGGGAGGATCTGAGCAGTGTGACAGGGTTCACATCATC
CTCGCGCTTGGCTGAGGATCTGAGGCGGGCGTGCATGAACAAGACATGTG
CGGACTGCTACCTCGTCTCCCGCAACCGCGCCTGTTTCAAAGCCCACAAG
GCTGTACTTGCCTGCCGCAGCGCCGTGCTCCGCCGGCTCTTGGCGGAATG
CCTTGGCGGCCCGCAAGCACCAGGGGCACATTCACAGCCAGCCTCCTCCT
CTGCGGGCATTCCTGACCTTCGGCGGAATGCGTGGGCCGCGAGCAAGTTG
GCGGCGGGCTCAGACGTCTCTGCGGCGAGCGCGGATGGGCAGCTACCGCT
TGTGTGCCTCCCAGACACAATTTCTCCGGACGTCATGCCGGTGATCCTGG
AGTATCTCTACACGGACGAGGGAGGATCTGAGCAGTGTGACAGGGTTCAC
ATCATCCTCGCGCTTGGCTGAGGATCTGAGGCGGGCGTGCATGAACAAGA
CATGTGCGGACTGCTACCTCGTCTCCCGCAACCGCGCCTGTTTCAAAGCC
CACAAGGCTGTACTTGCCTGCCGCAGCGCCGTGCTCCGCCGGCTCTTGGC
GGAATGCCTTGGCGGCCCGCAAGCACCAGGGGCACATTCACAGCCAGCCT
CCTCCTCTGCGGGCATTCCTGACCTTCGGCGGAATGCGTGGGCCGCGAGC
AAGTTGGCGGCGGGCTCAGACGTCTCTGCGGCGAGCGCGGATGGGCAGCT
ACCGCTTGTGTGCCTCCCAGACACAATTTCTCCGGACGTCATGCCGGTGA
TCCTGGAGTATCTCTACACGGACGAGCTCAACTTGGAGCCCCAAGTCTTG
GCGGACAGTTACGCGGACACCTACACCCCCCCAAGTGGCTCGGGAGTGAC
TGGCACGGGACAGGCAGGGGATGAGGTGGGGATGGGCCAAGGGCGTGCTC
AAGCAGATCGCATGGACGCGGGAGAGGACCCGAAATCTCAATCCGGGTAT
CCGCAACAGCTGGGAGCGGACGGCAGGAGTGGCGAAGGGCAAAACGGAAC
CCGCAGGCAGGGAGCCTGGCTGAGAGGCGAGAGGTATGCTGGAAAGGCAG
AGAGGGGCATATTGGCCAAGCTGGAGATGTTTGAGAGGATACTTGAGGCA
GCCACGGCGCTGGAGCTAGCCAGGCTGCGCAGCCTCGTGGAGTGGGAGTG
CCGCAACCGTGTCAACAACGAGACTGTGAGTACCCTAGTCTACTTTGATG
TGTACATGACATGTACCACACCCCTGCTCCAAGTTGGCCGTGTCAGATGC
TCGTCCCGTCCACACGTATACTTCGTAGGTACGAGTAGCTTTTGCTGCTG
ACTCAACTTGGAGCCCCAAGTCTTGGCGGACAGTTACGCGGACACCTACA
CCCCCCCAAGTGGCTCGGGAGTGACTGGCACGGGACAGGCAGGGGATGAG
GTGGGGATGGGCCAAGGGCGTGCTCAAGCAGATCGCATGGACGCGGGAGA
GGACCCGAAATCTCAATCCGGGTATCCGCAACAGCTGGGAGCGGACGGCA
GGAGTGGCGAAGGGCAAAACGGAACCCGCAGGCAGGGAGCCTGGCTGAGA
GGCGAGAGGTATGCTGGAAAGGCAGAGAGGGGCATATTGGCCAAGCTGGA
GATGTTTGAGAGGATACTTGAGGCAGCCACGGCGCTGGAGCTAGCCAGGC
TGCGCAGCCTCGTGGAGTGGGAGTGCCGCAACCGTGTCAACAACGAGACT
GTGAGTACCCTAGTCTACTTTGATGTGTACATGACATGTACCACACCCCT
GCTCCAAGTTGGCCGTGTCAGATGCTCGTCCCGTCCACACGTATACTTCG
TAGGTACGAGTAGCTTTTGCTGCTGA
back to top