mRNA_S-ischiensis_contig63.17203.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: D7G1N7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N7_ECTSI) HSP 1 Score: 607 bits (1566), Expect = 6.300e-184 Identity = 563/1608 (35.01%), Postives = 713/1608 (44.34%), Query Frame = 1
Query: 112 STEPDFEVGFWTSLKAALPWTEAGKEADYAEERLDALDEIQGELDDALRIRKLVDAGLHERALTKLMKTTEGQMYHNFHKHRYRMEKTGEWEFVPPSVQRKWRLAQHQTEAVVALKQYMGKRRDRFLRIRDLCRRTKQAGLRSDQTVVTILPEELVDASLLAITASGNKRSQQALAKDMYGENKRKCKWQAITDKGESCYCTNPRMVHPHRQFKDEFGVMVNDTLTTCAWHTKYCVSKVHGDSPVAVTTVNAGALCNECLVQLSKGPLRQMSAFSVRGVHKRGIPGTTEFEMESSGKRNAWFIAGPGPTRLLAMKPRHPKAPPRDPPGGLRAPAVYRPPPEFPTWSLENLRRQYHLSRWKLRVQKLGGGAATRIQSVYRGYVARRLREVARFDRPERVRERIEGAAVMQALVRRFLARCLFLQIIAFRSEAALQIQRIFRGRCARMACREVRARQMVNKQILFWLARTRVAALRVVRRIRKDIERKEASSAAAVAIQCVWRGRMGRRKAEERRKGAMRQLIASIMIERWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHREELTFVAECLQPAVXXXXXXXXXXXXXXVLNQAWGWIGMSK--AGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYRAGLFAFPGKN-STTAGTERQQLPWLKGEEIFTAAFDKDRTGTCTKVEFKMGLESFSGKEGYPLQRREAEALFRRYYDGDGYCHWYGMLADYWNNG-RQEACVRHGHLLCARCLR*ASAWFQDVQVRA--PVRPALSGGQGRRQGVPPR----RGRL---RQEGACTSRVLVRCTPRAECSCTKTCL*QEGVCACLFALLLLQLFEGNYSVQCAAFTTTITTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPFTPP---PRAVQIPLVGELNLCGLRRRXXXXXHRGLHRFPVCPL--GPAGGSPG-CLCRGSPGP*GAGGPGKVSRLRAGPALTDGGRGPGEFSRGAGQPRGHGAALPGEERRQVRHRLACRPGGKRHPGLLPCGGGEHRKRAEPEGAQVR------LPRLGGHAVCAGGGAPGVHEPRGAVPL-------------GAWPAH---GHQEGGRGAGGRRLRADGLC---GKACGLPGEALEEIGQGHQAGALGRAPTHRAEAAAGLRAAHDPKPHAGPQTGRRLPRPRLSRKGLRHLQHREGRXXXXXXXXXXXXRRRXXXAXXXXXXXXXXXXXXXXXXXXXXAGPELGAGPGPGQASRGDRTPPMTTVAVRRPDTGRGSATATPASE---RRRTATGGEAAEAMRRALRDARGRARSPSIGSKR--PESEDPTQLAYKLATAAREKTFGVEKAPSGRGIKKHVCRHPACGQVFSGPAAAAEHERSQHRFQRHLATAVPMTDQFFSAAWPKDA-PWLDKEGPFARDDGARF-AVLRSTFCWTVLYGVCGTALCCAVLXXXXXXXXXXXXXXIARDDGSRVARFACPVEGCGVRFPSSRLRGLHFRVGHSIFEREKVAAELPLSFAPPLPPLPLPXXXXXXXXGGVVAAGPAAAHPDVQFVGAYRLVPPFAPPAGAPEIPSCGKHGRLKEYCMRCRE 4782
S + +FEVGFW SLKA LPWTEAG +ADYAEERLDA E Q ELD+ALRIRK+V+ GLH+ AL +LM +TEGQMYH+FHKHRY++E+TGEW FVPPSV+R+WR A +T+ V L+ YM RRDRFLRIR LCR+ + A L+S +VT+ PE L+D +LL + A G K+S+ A G +KC WQ + KGE C+CTN RMVHPHR FKDEFGV+++DTL TC WH CVS HGD PV ++T N GALCNECLVQL+KGP+R +AF GV F+ + G + G G L K +K G AA +Q YRGY AR LR + + P R R+E A VMQ+LVRRFLAR L QI AFR+ A IQ++ RG AR R RAR+MV +Q+LF LAR VA+ +V RRIR+++ +K +A A++ Q WRG+ GR KA R +R+ XXXXXXXXXXXXXXXXXXXXXXXXXXX R E LQP V +L Q WGW+G A AG + K +T+ R L L GE FT FD+DRTGTC+KVEFK+GLESF + GYPLQ+ EA + +RY+DGDG+C W+ L Y N G + AC RHG LLC C+R F+ + + GG G +G R RGR+ +Q A S+ L + + EG C+ L Q + N Q A + T P + + EL+ RR G + P G G P L P GA P K ++ P+ + A +ERR A R G L K A A+++ R+ G A E R AV L GA H E R+R +GL K + L +G A A G T + +A G G T +R + SR XXX G+ P + + + RRP T A TP +RRT TGGE A+R RARSPS G+ + P E ++ AY L TAA GV +APSGRG +KHVC HP CG+VF A+A H+ +HRF+ LA P+TDQF +WP D PW G A G + +V + T T G G + R D S ARFAC V GC RFP +RL GLH R+GH+ F+ EK+ A + +P V AA H F+GAYRLVPPF P G P+IP+CG HGR K C RC +
Sbjct: 67 SEDENFEVGFWDSLKAVLPWTEAGAKADYAEERLDAHHEFQEELDEALRIRKMVETGLHDMALDRLMASTEGQMYHHFHKHRYQLEQTGEWTFVPPSVKRRWRHAVKKTDKVEKLRAYMAMRRDRFLRIRGLCRQVRNARLKSSDLLVTVEPESLIDENLLQV-AGGGKKSKPA--NPFGGARLKKCHWQNVNSKGEQCFCTNNRMVHPHRLFKDEFGVLIHDTLATCGWHATRCVSNSHGDDPVVISTANEGALCNECLVQLTKGPIRNTTAFGAPGVR---------FKNKRLGSADT--DPGTGGEEFLLQK------------------------------------------------EKNGERAARAVQRTYRGYRARHLRAMVALEHPLRALLRVESAIVMQSLVRRFLARTLVRQISAFRNMNATAIQKMARGMQARALFRRKRARKMVQRQMLFLLARAHVASAKVARRIREEMRKK---NAVALSFQRAWRGKKGREKAAMLRAITVRRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIRMFADRRRTQKMRREFDGAVRTLQPLVRGLLARVTARRERALLGQVWGWLGTDTVTANGIYARFLPKNKYLVSRESAPLQQFSASQSASGNVDAGNYDELQKGLGSTSSLVRSTLEALPGERHFTEKFDRDRTGTCSKVEFKIGLESFLREAGYPLQKEEAALIVKRYFDGDGFCAWHSFLNSYHNAGSKSSACARHGRLLCTLCIRTKQLGFKMCECGHVFDAHELVVGGSGPAKGETVRKQDQRGRVVPQKQLSALLSKGLSKTVVDRPIN-------VEG-CSAASNLRRAQ-YTNNSPSQAALISAQRPNGFRVTGARGGTKTPPHATTSSRARRRWRRQKPGRGSRSITEEASQPGGITALSLAELSPPFFGRRTSADGADGSGAAALSPTATGDVAGFPKENLDMVRPANQGATSPNK-RKITYIPSFQE-------------------ARSQEKERRDAS--CAGRRGQAERAALAEMNSAVQGKNAADYAAKLQDDIATNTSRVDGRLCLAP--VMSKKELRHAVFLERHWCKLIKDIRNGATDPHLPISEAE--------RMRVEGLMIPNKKRAQRLDDRLRALG--FHARASGIYKTAASASATGTX-------XXGSATAKRRAPGQSSRNXXXXXXX------------------------------------------XXXXXXXXGSRPHTQEEKQESMAKMVEACRKRRPGTAESEAGGTPEQSVRRKRRTVTGGEMESAVRLLKSRGESRARSPSTGAWQAVPTVEQASKTAYGLLTAASANAAGVVQAPSGRGFRKHVCLHPGCGKVFHLKASADRHQEKEHRFRMRLAAPTPLTDQFMLPSWPSDGVPW--SSGLPAPGRGKKHTSVSKGTV--TACRGPAGRTP--TKTAKTVGAGGSAGDTVLDRGDASLHARFACGVPGCSHRFPEARLLGLHLRMGHNEFDLEKMKARRDGT---------VPTQTLDGVT--VTAAIDVGGHVRASFLGAYRLVPPFQSPTGCPDIPACGLHGRPKHGCQRCAD 1500
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: A0A835ZC38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC38_9STRA) HSP 1 Score: 137 bits (345), Expect = 8.120e-29 Identity = 128/412 (31.07%), Postives = 180/412 (43.69%), Query Frame = 1
Query: 181 GKEADYAEERLDALDEIQGELDDALRIRKLVDAGLHERALTKLMKTTEGQMYHNFHKHRYRMEKTGEWEFVPPSVQRKWRLAQ--HQTEAVVALKQYMGKRRDRFLRIRDLCRRTK------QAG-------------LRSDQTVVT----------ILPEELVDASLLAITASGNKRSQQALAKDMYGENKRKCKWQAITDKGESCYCTNPRMVHPHRQFKDEFGVMVNDTLTTCAWHTKYCVSKVHGDSPVA--VTTVNAGALCNECLVQ--LSKGPLRQMSAFSVRGVHK----RG------------IPGTTEFEMESSGKRNA-WFIAGPGPTRLLAMKPRHPKAPPRDPPGGLRAPAVYRPPPEFPTWSLENLRRQYHLSRWKLRVQKLGGGAATRIQSVYRGYVA 1260
GK A YAE+RL+AL+EIQGELD A+ I ++ +H+ AL L+ TE Q Y +FHKHR++ E+ G+W ++ PS +RKWR A ++ A+ A + Y RRDR LRIRDLC + + Q G L Q+ T + P L+D LL IT G ++ L + +V +TL TCAWH CV+ H + A +T N ALC +CLV L + +S V GV + RG P T + +S K ++ WF+ P + P HP AP R P + Y P+ P E LRRQ+H + + Q+ G A+ IQ +R Y A
Sbjct: 101 GKTASYAEDRLNALNEIQGELDRAVAINGMIKNHMHDTALEALITDTEDQTYQDFHKHRFKAEQAGQWSYLTPSERRKWRKAGLGRESTALEAYRIYSHHRRDRMLRIRDLCLQVRAFHEKLQPGEDKNMSDMPASSVLDGQQSAATAGQIPTVPVLVYPRSLIDTGLLDITNGGRSQAVARLRASLQ---------------------------------------VVPETLATCAWHATNCVAACHMEDEYAPPITAPNEHALCAQCLVNDVLGGSLVPLVSGCDVPGVRRVTRVRGHANVGLATTRLRTPKETNDDEDSIVKVSSRWFLREPKRRWNPSHLPPHPHAPRRQAPVAVLPHKQYCLLPK-PASLAEALRRQWHNIQHRAHRQQNGHAASVVIQKTWRRYRA 472
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: A0A6H5JL35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL35_9PHAE) HSP 1 Score: 128 bits (322), Expect = 4.780e-27 Identity = 104/364 (28.57%), Postives = 141/364 (38.74%), Query Frame = 1
Query: 1405 ALQIQRIFRGRCARMACREVRARQMVNKQILFWLARTRVAALRVVRRIRKDIERKEASSA--AAVAIQCVWRGRMGRRKAEERRKGAMRQLIASIMIERWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHREELTFVAECLQPAVXXXXXXXXXXXXXXVLNQAWGWIGMSKAGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYRAG----------------------------LFAFPGKN-STTAGTERQQLPWLKGEEIFTAAFDKDRTGTCTKVEFKMGLESFSGKEGYPLQRREAEALFRRYYDGDGYCHWYGMLADYWNNG-RQEACVRHGHLLCARCLR 2400
A IQ++ RG AR R RA+ MV +Q+LF+LAR VA+++V R+IR+++ +K S+ AAVA+Q R RR+A++ R+ E LQP V +L Q WGW+G A G P + T+ R L L GE FT FD+D+TGTC+KVEFK+GLESF + GYPLQ+ EA + +RY+DGDG+C W+ L Y N G + AC RHG LLC C+R
Sbjct: 3 ATAIQKMARGMQARALFRRKRAQVMVQRQMLFFLARAYVASVKVARKIREEMRKKNVSNGWGAAVAMQSTIRMFADRRRAQKMRR------------------------------------------------------------EFDGAVRILQPLVRGLLARIAARRERALLGQVWGWLGTDTATANGIYARFLPKNKYLISRENVALQQFSASHPASGHIGTGNDNDLQKVNAEVRQATAWCKCMCCLYFVVRPSQGLEPTSSLVRSTLEVLPGERHFTEKFDRDKTGTCSKVEFKIGLESFLREVGYPLQKEEAALIVKRYFDGDGFCAWHSFLNSYHNAGSKSSACSRHGRLLCTLCIR 306
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: A0A6S8CU03_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CU03_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.980e-17 Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = 2
Query: 3209 NVQSLK-ELKYGFLVSEATPFVQGGELQASTNPAGLYLSVLGQLTDTRRGGGGLVADASVLMDFVARHAVFLERHWKKLVKDIKRGRLDEHLPIGQKRRRGLELRMIPNPTLARKLDDAFRGLGFHARASGTY 3604
+VQ K EL+ GF++S P V EL+ +T LYL ++ +L D R + + V H VFLERHWKK+V+DI+ GRL+ H+PI RR + +M P P A ++D LGFHAR+SG +
Sbjct: 691 HVQQTKIELERGFIISRPVPIVSEDELRLTTRVGDLYLKLIEELGDERMFSSRHLDQDPRFVSLVFEHDVFLERHWKKIVRDIRSGRLNRHVPISGGDRRAHQAKMYPKPNQASRIDKGLHALGFHARSSGVH 823
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: A0A7S1C8T2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8T2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.370e-16 Identity = 53/128 (41.41%), Postives = 76/128 (59.38%), Query Frame = 2
Query: 3218 SLKELKYGFLVSEATPFVQGGELQASTNPAGLYLSVLGQL-TDTRRG-GGGLVADASVLMDFVARHAVFLERHWKKLVKDIKRGRLDEHLPIGQKRRRGLELRMIPNPTLARKLDDAFRGLGFHARAS 3595
SL ++ F V+ P +Q GE++ + A LY+ +L L RRG G L+AD + LM + + VFL+R W+KL+ DI+ G L+ LPIG KRR + + P PT A L++ FR LG+H RAS
Sbjct: 62 SLYRYRFTFDVTRPVPVIQEGEIKMTLRMADLYVFLLRSLGAPPRRGEGDDLLADHNRLMTLIFSYHVFLDRFWRKLLHDIRVGHLEPSLPIGPKRRARVNAHLKPQPTRAEYLEEVFRSLGYHERAS 189
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: F0Y7Q9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7Q9_AURAN) HSP 1 Score: 96.3 bits (238), Expect = 4.880e-16 Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = 2
Query: 3215 QSLKELKYGFLVSEATPFVQGGELQASTNPAGLYLSVLGQLTDTRRGGGGLVA---DASVLMDFVARHAVFLERHWKKLVKDIKRGRLDEHLPIGQKRRRGLELRMIPNPTLARKLDDAFRGLGFHARASGTYNT 3610
QS EL+ GF ++ P + EL+ + A +YL +L + +D LV + + + + VFLERHWKKL++D++ G+++ HLPI +RR LE RM P P A K+D A + LGFH R+SG Y +
Sbjct: 1145 QSKVELERGFRITRPIPMIFDDELRLTVKAADVYLELLDRFSDEE-----LVVRKHEDQAFVKLIFENDVFLERHWKKLLRDVRYGKINRHLPISPERRAALESRMYPKPQQANKIDAALKRLGFHVRSSGLYGS 1274
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: A0A6H5JIM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM9_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 1.010e-14 Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 331 MYHNFHKHRYRMEKTGEWEFVPPSVQRKWRLAQHQTEAVVALKQYMGKRRDRFLRIR 501
MYH+FHKHRY++E+TGEW FVPPSV+R+WR A +T+ V L+ YM RRDRFL+IR
Sbjct: 1 MYHHFHKHRYQLEQTGEWSFVPPSVKRRWRHAAKKTDKVEKLRAYMAMRRDRFLQIR 57
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: A0A7S3ZVQ2_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVQ2_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.390e-13 Identity = 52/131 (39.69%), Postives = 78/131 (59.54%), Query Frame = 2
Query: 3212 VQSLKELKYGFLVSEATPFVQGGELQASTNPAGLYLSVLGQLTDTRRGGGGLVADASVLMDFVA---RHAVFLERHWKKLVKDIKRGRLDEHLPIGQKRRRGLELRMIPNPTLARKLDDAFRGLGFHARAS 3595
+QS EL+ GF ++ P + GEL+ ST+P +YL +L R G L FV+ R+ VFLERHWKK+++D++ G L+ HL + ++RR L R+ P A +L++AFR LGFHAR++
Sbjct: 1142 LQSQNELRKGFHLTRPIPMILDGELRISTDPTEVYLELL-----DRFGKEDLNLREHEDTGFVSLCFRNDVFLERHWKKILRDVRYGTLNRHLDLSKERRHELTQRLYAKPKHASQLEEAFRRLGFHARSA 1267
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: A0A7S3H7V8_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7V8_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.550e-7 Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 2
Query: 3263 PFVQGGELQASTNPAGLYLSVLGQLTDTRRGGGGLVADASVLMDFVARHAVFLERHWKKLVKDIKRGRLDEHLPIGQKRRRGLELRMIPNPTLARKLDDAFRGLGFHARASG 3598
P V+ E+ S +Y +++ Q+ R + D + V H ERHW+K+V DI+ G+LD L I + R E IP P LA++LDD FR LGFH + G
Sbjct: 253 PVVKNDEIVYSFEGPQIYFNLVNQII---RMDEKVNFDDPEFLKLVVDHIQLFERHWRKMVADIRTGKLDRRLQINPESRLIFENANIPKPNLAKRLDDTFRKLGFHMKVLG 361
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Match: A0A2R5GL35_9STRA (Abnormal spindle-like microcephaly-associated protein-like (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL35_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.900e-7 Identity = 40/120 (33.33%), Postives = 64/120 (53.33%), Query Frame = 2
Query: 3239 GFLVSEATPFVQGGELQASTNPAGLYLSVLGQLTDTRRGGGGLVADASVLMDFVARHAVFLERHWKKLVKDIKRGRLDEHLPIGQKRRRGLELRMIPNPTLARKLDDAFRGLGFHARASG 3598
GF V++ P + L+ T A LY+ +L L+ GL+ D + +V + F++RHW+KLV DI+ G L++ LP+ + R +E ++ +P A LD A LGF+ SG
Sbjct: 1058 GFHVADPVPLIVNDNLRMETKTAPLYVDMLLALSSR---SCGLLEDWPAFVAYVFQSFAFIDRHWRKLVYDIRTGTLNKLLPVSARMRAQVESQLEADPARAEMLDAALEQLGFYKSNSG 1174 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig63.17203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig63.17203.1 >prot_S-ischiensis_contig63.17203.1 ID=prot_S-ischiensis_contig63.17203.1|Name=mRNA_S-ischiensis_contig63.17203.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=795bp MEFEASDDGSFETSEDSSESEETESSSESDESTEPDFEVGFWTSLKAALPback to top mRNA from alignment at S-ischiensis_contig63:1065129..1096496- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig63.17203.1 ID=mRNA_S-ischiensis_contig63.17203.1|Name=mRNA_S-ischiensis_contig63.17203.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=31368bp|location=Sequence derived from alignment at S-ischiensis_contig63:1065129..1096496- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig63:1065129..1096496- >mRNA_S-ischiensis_contig63.17203.1 ID=mRNA_S-ischiensis_contig63.17203.1|Name=mRNA_S-ischiensis_contig63.17203.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4770bp|location=Sequence derived from alignment at S-ischiensis_contig63:1065129..1096496- (Schizocladia ischiensis KU_0333)back to top |