mRNA_S-ischiensis_contig15.3823.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: D7FK88_ECTSI (SANT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK88_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.530e-40 Identity = 75/132 (56.82%), Postives = 98/132 (74.24%), Query Frame = 2
Query: 524 TKVPGSKLGPGRWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQFHAEKSM 919
+K P +K RWRTHR EDY N+CG IMY ++ GPFGY+S RFPMERP+ LG+ + R+ TVIERW+P +VALFEGA+SVHGK FH V+ ++ KT +V+EFYY WK T+HYKQWK+ F AE+++
Sbjct: 385 SKGPSNKPKEMRWRTHRMVEDYTNVCGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGMRRPTVIERWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKSMFRAEQAI 516
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A6H5KPS5_9PHAE (SANT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS5_9PHAE) HSP 1 Score: 170 bits (430), Expect = 1.650e-40 Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 2
Query: 524 TKVPGSKLGPGRWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQFHAEKSM 919
+K P +K RWRTHR EDY N+CG IMY ++ GPFGY+S RFPMERP+ LG+ + R+ TVIERW+P +VALFEGA+SVHGK FH V+ + KT +V+EFYY WK T+HYKQWKA F AE+++
Sbjct: 584 SKGPSNKPKEMRWRTHRMVEDYTNICGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGIRRPTVIERWSPHDVALFEGAISVHGKVFHKVAEEIDGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAI 715
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A7S3HK57_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK57_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.150e-38 Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 2
Query: 557 RWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQF 901
RWR H TEDYVN+ G IMYP GP+GYD+ RFP+E+ S LG C RK TVIE+W+P EVA+FE AM+++GK FH V + V+TK+TQEVIEFYY WK T+HYK+WK +
Sbjct: 71 RWRPHGITEDYVNIIGEIMYPKQTFGPYGYDAENGRFPVEKMSSLGWLLCPLRKPTVIEKWSPIEVAVFEAAMTLYGKNFHTVQKYVKTKSTQEVIEFYYDWKKTNHYKEWKKNY 185
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A835Z5U6_9STRA (SANT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U6_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.670e-37 Identity = 66/133 (49.62%), Postives = 91/133 (68.42%), Query Frame = 2
Query: 509 MDGMGTKVPG-SKLGPGRWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQFH 904
MDG ++ G + P RWRTHR +D VN+CGN MYP + +GP+GY A + +ER +ML + Q R+ + +E+W+P EVA FEGAM ++GK+FH ++ V TKT Q+ IEFYY WK+T HYKQWK F+
Sbjct: 1 MDGYRPRLSGWRRKEPQRWRTHRMVDDLVNLCGNSMYPQVSMGPYGYRPEAGSYALERAAMLSMIQHPLRRPSAVEQWSPLEVAKFEGAMCIYGKQFHKIAAEVGTKTCQQAIEFYYVWKLTGHYKQWKKVFY 133
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A4D9CXF5_9STRA (SANT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXF5_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.340e-37 Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 2
Query: 524 TKVPGSKLGPG------RWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQF 901
+K+ G+ G G RWR R EDYVN+ G++MYP + GP+GYD P+ERP+ LG+ C AR+ TV+E W+P EVA FEGA+ + GK F+ +S+ + +K+T+E IEFYY WKMTSHY+QWK F
Sbjct: 80 SKIEGAGSGGGKGKPVERWRAQRMAEDYVNLVGDLMYPKVSFGPYGYDMAKGEIPLERPNTLGVLMCPARRRTVMEHWSPFEVACFEGAIVLVGKNFYEISKLLPSKSTKECIEFYYVWKMTSHYQQWKRSF 211
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A7S0KBC3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBC3_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.470e-35 Identity = 65/136 (47.79%), Postives = 95/136 (69.85%), Query Frame = 2
Query: 503 SIMDGMGTKVPGSKLGPGRWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQFHAE 910
+ + G+ +K +++ RWR HRA EDY+++ G+IMYP G FGY+S +P+ERP+ LG+ R+ TVIE+W+P EVA FE A++++GK FH V + V+TK+T+E++EFYY WK TSHYK+WK Q E
Sbjct: 225 TALPGVESKRNNTQIKEYRWRAHRAAEDYISLVGDIMYPGTYFGAFGYNSDKGNYPVERPNTLGLLTSPLRRPTVIEKWSPYEVASFEAALTLYGKVFHSVQKVVKTKSTKEIVEFYYVWKKTSHYKRWKQQHEPE 360
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A6U0ZH30_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZH30_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.100e-34 Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 2
Query: 557 RWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQFHAEKSMEDAGDAEE 943
RWRT + EDY+ M +MYP I++GPFGYD RFP+ER LG R+ +VIERW+P E+A FEGA+++ GK FH V RAV++KTT+EV+EFYY WK T+HY WK + E + GD EE
Sbjct: 66 RWRTTQMAEDYMEMVSRLMYPPIQIGPFGYDPLKGRFPVERLHALGYITNPLRRPSVIERWSPYEIAKFEGAIALFGKHFHKVQRAVESKTTKEVVEFYYVWKKTAHYDHWKRIYEPEMIPVEDGDDEE 194
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A7S0UFW2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFW2_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.700e-33 Identity = 59/123 (47.97%), Postives = 89/123 (72.36%), Query Frame = 2
Query: 557 RWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQFHAEKSMED 925
RWR H+ EDY N+ G++MYPA + +GY+ R +P+E+ S+LG + R+ TVIE+W+P E+ +FEG+M +GK+F VS+ + TKTTQEVI+FYY WK T+HYK+WK Q+ +++ + D
Sbjct: 182 RWRVHQMAEDYTNLVGSMMYPATQFHSYGYNPQEREYPIEKISLLGFMKSPLRRPTVIEKWSPYEIGIFEGSMLHYGKDFRNVSKQIGTKTTQEVIDFYYIWKKTAHYKRWKEQYISDEELID 304
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A448Z6P5_9STRA (SANT domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6P5_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.800e-32 Identity = 58/121 (47.93%), Postives = 85/121 (70.25%), Query Frame = 2
Query: 557 RWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQFHAEKSM 919
RWR H+ EDY + G +MYP + +GYD R++PME+ S+L Q R+ T+IE+W+P E+A+FEG++ +GKEF VS+ + TKTT+EVI+FYY WK T HYK+WK QF +++ +
Sbjct: 217 RWRVHQMAEDYTTLVGRMMYPVTQFNNYGYDPLMRQYPMEKISLLSFIQSPLRRPTIIEKWSPYEIAVFEGSLFHYGKEFREVSKQIGTKTTREVIDFYYIWKKTGHYKKWKEQFISDEDL 337
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Match: A0A7S4RT22_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RT22_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.160e-31 Identity = 54/124 (43.55%), Postives = 88/124 (70.97%), Query Frame = 2
Query: 557 RWRTHRATEDYVNMCGNIMYPAIKVGPFGYDSGARRFPMERPSMLGITQCYARKTTVIERWNPREVALFEGAMSVHGKEFHLVSRAVQTKTTQEVIEFYYTWKMTSHYKQWKAQFHAEKSMEDA 928
RWR H+ +DY+ + GNIMYP+ +GP+ Y ++P+ER + LG+ R+ + IE+W+P E+A+FE ++S++GK FH V + V++KTT+E+IEFYY WK +SHY++WK Q+ + E++
Sbjct: 117 RWRAHQMADDYITLAGNIMYPSTYLGPYAYTHTHGQYPIERLTTLGLLTNPCRRPSPIEKWSPYEIAMFEASLSLYGKVFHKVQKIVRSKTTKEIIEFYYIWKKSSHYRRWKGQYEVDIGSEES 240 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig15.3823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig15.3823.1 >prot_S-ischiensis_contig15.3823.1 ID=prot_S-ischiensis_contig15.3823.1|Name=mRNA_S-ischiensis_contig15.3823.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=350bp MSSDSAESRKPVRGPSPVPDSKKPARGPSPVPESKGSGEDASRRSRRRSEback to top mRNA from alignment at S-ischiensis_contig15:2463154..2465198+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig15.3823.1 ID=mRNA_S-ischiensis_contig15.3823.1|Name=mRNA_S-ischiensis_contig15.3823.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2045bp|location=Sequence derived from alignment at S-ischiensis_contig15:2463154..2465198+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig15:2463154..2465198+ >mRNA_S-ischiensis_contig15.3823.1 ID=mRNA_S-ischiensis_contig15.3823.1|Name=mRNA_S-ischiensis_contig15.3823.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2100bp|location=Sequence derived from alignment at S-ischiensis_contig15:2463154..2465198+ (Schizocladia ischiensis KU_0333)back to top |