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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 378 |
| Cds size | 375 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815733.2249155-CDS-S-ischiensis_contig15:400350..400503 | 1622815733.2249155-CDS-S-ischiensis_contig15:400350..400503 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig15 400351..400503 - |
| 1695739882.7661307-CDS-S-ischiensis_contig15:400350..400503 | 1695739882.7661307-CDS-S-ischiensis_contig15:400350..400503 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig15 400351..400503 - |
| 1622815733.2378979-CDS-S-ischiensis_contig15:400806..400977 | 1622815733.2378979-CDS-S-ischiensis_contig15:400806..400977 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig15 400807..400977 - |
| 1695739882.776066-CDS-S-ischiensis_contig15:400806..400977 | 1695739882.776066-CDS-S-ischiensis_contig15:400806..400977 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig15 400807..400977 - |
| 1622815733.25421-CDS-S-ischiensis_contig15:402560..402611 | 1622815733.25421-CDS-S-ischiensis_contig15:402560..402611 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig15 402561..402611 - |
| 1695739882.7850256-CDS-S-ischiensis_contig15:402560..402611 | 1695739882.7850256-CDS-S-ischiensis_contig15:402560..402611 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig15 402561..402611 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig15.3519.1 >prot_S-ischiensis_contig15.3519.1 ID=prot_S-ischiensis_contig15.3519.1|Name=mRNA_S-ischiensis_contig15.3519.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=125bp
LARRSLILNVLDALGVPDGNQGRWLANEETPTTTAHSEATPPVTPPPPPS
PLHAGVGVEGSTLQALADQAIASQDEHALHNLLESTSGRAGFRLFNKKLK
KAQKAIANARLQLQPPTPTPYANST back to topmRNA from alignment at S-ischiensis_contig15:400350..402611- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig15.3519.1 ID=mRNA_S-ischiensis_contig15.3519.1|Name=mRNA_S-ischiensis_contig15.3519.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2262bp|location=Sequence derived from alignment at S-ischiensis_contig15:400350..402611- (Schizocladia ischiensis KU_0333)
CTTGCCCGCCGCTCATTGATCCTCAACGTCTTAGACGCCCTGGGTGTCCC
GGTACGTGTGTGTCTGCAAGTAAATGCTGTGTCTATCTGTTTGGGTAGTC
GGGTCGTACAAGGGTTCTACTGTAGTATTTGTTCTCGTACTCAGTACAAG
TACAGTACGAGTGCTATTGTACAGTACTTTGTACTTTGAAGCAACCGTAC
AGTGCAAGATACACACACAGCATGGCTTGGAACGCCTGTGCAAGATACAG
ACACAGCAGAACAGAGTACGGAATGTGTCTGGGCTCGCATGCCACGCTTA
CCAGAGCCGATGCACCGTGTGTATGTGGTACCCTACCACAGTACTGGAAG
CCTACTGTACTCGTACCTGCAGCAGTTTGAGGATTTGCATGAACTCTTTG
AAGAACAGTAGAGGTGAAATGGGGTATTAGTGAACCCCCGGCGAAAAATA
TTAATGACACGATCAATACGTAGAATTGTGCTACACTTTTTTTTGCGCTG
GAAAGAGCACTCTGTAGGCACCTGTGGGTGTAAGCTGCGTGGCCGCCCGC
ATCCTAGTTGCAGCGTTGTGGCAATTTGAAGCAGGGTTTGCACGCTCGGG
CTGGCAGACGCCCAACGCAAAACGACAAAACAACTTGACTACGACGTTTT
GCGGGGCACGGAGCTTTGTGTGTTGTGTAGAGGGCTCGCGTGTGGCCCTG
TTGATGCAATCGGGGCGGCCAGAGCCGTCGTCGTTGCGGAGATTTGCCCC
GCACACTGCGCCAGCAGCGCGTCAAACATGGCTCGACCCGGCGGGTTCGG
TCCCAAACCCGGCGGGCGTTGCCGGTAAAACGGATCCACCGGCTGCCGGT
TCATCCACTCGATCGGGCATTTCTCGCGACCTACACCGACCTGGCGACTG
TTTATTGGCACAAACGAACCCGCTCAGCTACCGGTAAAAAAATAGTCCCG
GTCGGAACTCGCCGTTGTTCCTCCGGGGCGGGGCCGGGAAATTTTCGCCT
CTCGTCGCTTCATCCGGACTCGGAGCCAAATGCTCGTGAACGACGACGAT
TCACCGCGCGCGGTTTGTTTTTTTCGAAGCACCATGTAATCACCTCCCCA
CTGCAAAAACCCGTACGCCGCGATTCGTTGCCATTGTTTCACACGCGGCG
GTCCCCCGGGGCTCCGGGCGTTCACTAGTACCCGAAAACTGCTTTTTCCG
GCCATTTTTTTTTTTGTCCGATTGAGGGCCGTAAACGGTTAATCCAAGGA
GTTGGTGAACGCAACCTCTTACGTGACTGGTAGAGCATCGAGTTATCTAC
CCGTCAAACTTTCCGCGCCTCGATCGGGTTCTAGCCCGAGATATGGGCGT
TCGCGCGACGGGCCCAAAAAGGGTTCACGAATACCCCATTTTACCTCTAG
CCACCCTTGCAGCACTTCCCTCCATGCACATGTTCTCGGGTAGCAAGTGA
CGGATATCTGCTTCCTTGTGTGGGCAGTCACCAACAACGGTGCCGAGGCG
CCCAAGTCGGTCAAGAACTTTCCTCGCCCTGCGCACCCGATGAAGCAGGA
AAATGACCCACTGCAGTACTGCCTCAGCAAGCCCCCACAATGCCTCCGCC
GCGCACCGGGCCCCCTGGAAATGTTGACGTGCAGGATGGGAATCAGGGGC
GGTGGCTGGCGAATGAAGAAACCCCAACCACCACGGCCCATTCGGAGGCC
ACGCCGCCGGTGACGCCTCCGCCGCCCCCGTCACCACTGCACGCCGGTGT
GGGGGTGGAGGGGTCGACCCTGCAGGCCCTGGCCGATCAGGCCATCGCGT
CCCAGGTGTTTTTTTGTGTGTGTGAGCGTGTGTGTATAAATTAGCTTGCG
CGTAGGTTGGCTGAAGTACTTGACAGTACTTCATACGTCAATGAACCGTA
CTTCTGGGAGTACTCGCAGTGCATGCGAGGGAGGGAGGGCGGGCGGGCGG
GCAGAGACAGGGAGGACACATGTGTCTGTGGGCGCTTGACCCATCAACCC
CTCCAGCCTGCATACTTAGACTGGTGGCTCTCCCCCCCCCGCCTCACGTG
CTGCCCTCTCGTGCGATTTCCCCGGCATCATTTGCCTGCCGTCCTTGTCT
GTGCGCAGGACGAGCACGCTCTCCACAACCTGCTGGAGAGCACCTCGGGC
CGCGCAGGCTTCCGGTTGTTCAACAAAAAGCTCAAGAAGGCCCAAAAGGC
CATCGCCAACGCCCGGCTGCAGCTGCAGCCCCCGACCCCGACCCCGTACG
CTAACTCCACCC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig15:400350..402611- >mRNA_S-ischiensis_contig15.3519.1 ID=mRNA_S-ischiensis_contig15.3519.1|Name=mRNA_S-ischiensis_contig15.3519.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=750bp|location=Sequence derived from alignment at S-ischiensis_contig15:400350..402611- (Schizocladia ischiensis KU_0333)
CTTGCCCGCCGCTCATTGATCCTCAACGTCTTAGACGCCCTGGGTGTCCC
GCTTGCCCGCCGCTCATTGATCCTCAACGTCTTAGACGCCCTGGGTGTCC
CGGATGGGAATCAGGGGCGGTGGCTGGCGAATGAAGAAACCCCAACCACC
ACGGCCCATTCGGAGGCCACGCCGCCGGTGACGCCTCCGCCGCCCCCGTC
ACCACTGCACGCCGGTGTGGGGGTGGAGGGGTCGACCCTGCAGGCCCTGG
CCGATCAGGCCATCGCGTCCCAGGATGGGAATCAGGGGCGGTGGCTGGCG
AATGAAGAAACCCCAACCACCACGGCCCATTCGGAGGCCACGCCGCCGGT
GACGCCTCCGCCGCCCCCGTCACCACTGCACGCCGGTGTGGGGGTGGAGG
GGTCGACCCTGCAGGCCCTGGCCGATCAGGCCATCGCGTCCCAGGACGAG
CACGCTCTCCACAACCTGCTGGAGAGCACCTCGGGCCGCGCAGGCTTCCG
GTTGTTCAACAAAAAGCTCAAGAAGGCCCAAAAGGCCATCGCCAACGCCC
GGCTGCAGCTGCAGCCCCCGACCCCGACCCCGTACGCTAACTCCACCGAC
GAGCACGCTCTCCACAACCTGCTGGAGAGCACCTCGGGCCGCGCAGGCTT
CCGGTTGTTCAACAAAAAGCTCAAGAAGGCCCAAAAGGCCATCGCCAACG
CCCGGCTGCAGCTGCAGCCCCCGACCCCGACCCCGTACGCTAACTCCACC back to top
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