mRNA_S-ischiensis_contig14.3312.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig14.3312.1 vs. uniprot
Match: A0A7S4DB10_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB10_HETAK) HSP 1 Score: 229 bits (584), Expect = 2.170e-62 Identity = 146/387 (37.73%), Postives = 222/387 (57.36%), Query Frame = 1
Query: 1 RPQRLTVLLCIMMGHLFINAFLYMNVQTDPNASTSQKIGDKVYFAVVAAICSTPIGIILVLLFKRTGTMIPNEDVYMSAPPEQIPEGLRDLVEHRKRIRQAEADVHEARSAMKATQGLLQVTLKQALIEAQRAGEGDLTQEKKVHLKQEFEAAVRINQKALLSARAALKLAEEEQKQYKQHFAADLEHELNEMVKDLSGFARIKKRHALKKQKMHEVHMSNLTKQERELLQAQDEELLKLKKAARLLYKKFLHSSTRKVAQTSA--VWPDWVTYIVYMTGVAYCAGCGYYVLMFSIFLNKCGDCPCGTDSCDAYAADDDFDYDTCITCPDPMTNNGGGA-----AEDWLQTIIVTFALGFVVSEPMTILAKRAIMPLVARVAILRSR 1140
RPQR VLLC++MG++ NA LY D NAS KV FAV++AI S P II+ LLFK+ G E+ Y++A E +P GLR V ++ + +A + AR A A Q L+ L QAL +AQ AG ++ E+K+ ++E++ A+ ++ALL A+ AL AE + A+L+ E+ E V++LSGF +I K+ ++ + H ++ + K++ LL+ ++EEL KL +A++L++K FL R A + + P WV Y+ Y+ Y +YVL FS+FLNKCG C C +C AA D Y+TC +CP + + G A A WLQT+I+T +GF +EP I+ KRA++P +A ++R R
Sbjct: 1045 RPQRFVVLLCLLMGNIGCNALLYFFKALDANASLWDIFLQKVVFAVLSAILSMPGPIIIGLLFKKAGKSRRAEEKYLTAEDEDVPRGLRGAVRDQRAVAEARVALLRARGAAGAAQAGLRAKLAQALRQAQEAGTDEIPIEEKLAFQKEYDQAMEDAKRALLEAKIALTKAERHAALARAEHKAELQREIEETVRELSGFRKIWKKWGKRRAQAHREALARMGKRDLLLLRVEEEELRKLSRASKLMFKVFLKPMKRAKAHHAGAVLLPGWVDYLTYLLAAGYVYLACWYVLKFSVFLNKCGSCSCSMGTCTDEAASD---YETCNSCPANLVSQGEDADGDWIAAQWLQTLILTLVIGFFFTEPGAIMVKRALLPYIANSMLIRER 1428
BLAST of mRNA_S-ischiensis_contig14.3312.1 vs. uniprot
Match: A0A7S2QVS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVS3_9STRA) HSP 1 Score: 163 bits (413), Expect = 8.110e-40 Identity = 116/372 (31.18%), Postives = 190/372 (51.08%), Query Frame = 1
Query: 1 RPQRLTVLLCIMMGHLFINAFLYMNVQTDPNASTSQKIGDKVYFAVVAAICSTPIGIILVLLFKRTGTMIPNEDVYMSAPPEQIPEGLRDLVEHRKRIRQAEADVHEARSAMKATQGLLQVTLKQALIEAQRAGEGDLTQEKKVHLKQEFEAAVRINQKALLSARAALKLAEEEQKQYKQHFAADLEHELNEMVKDLSGFARIKKRHALKKQKM-----HEVHMSNLTKQERELLQAQDEELLKLKKAARLLYKKFLH--SSTRKVAQTSAVWPDWVTYIVYMTGVAYCAGCGYYVLMFSIFLNKCGDCPCGTDSCD----------------------AYAADDDFDYDTCITCPDPMTNN-GGGAAEDWL 1026
RPQRLTVLL ++M +F NAFLY+ + Q++ DK+ F + AA+ STP I++ +L+K+ G M ED + IPEG+++ V R+ + AE +++ A+ A+K T+ L L+ + G+ D++ + K+ K+E++ +++ + L+ A+ L +++ + + + HE+++ + DL F I K+ LKK K+ + M+ LT ER LL+A++ +L +L AA+ LY F K QT + P WV Y+VY+ ++CA C +YV MFS+F+N C C CG DSC + D +D C CP+ M N DWL
Sbjct: 3775 RPQRLTVLLLMIMSQMFANAFLYIVKGVKEGQTFEQELTDKLIFGIGAALFSTPPAIVIGILYKKAGRMRKVEDSLAYLDEDSIPEGIKEEVIDRRDVVMAEKELYSAKYALKDTKEKLTNALRVSYFSNYEGGKADVSAKDKIEFKKEYDDSLKKCKDRLIEAKDILNKMVSKERDHTRERKRKIAHEISQGLGDLREFKHIIKKQ-LKKMKLTKEMKKKQQMARLTDSERLLLEAEENQLKQLGAAAKFLYGLFASPFKELHKKKQTPKLLPSWVNYVVYLISFSWCAWCFFYVFMFSVFVNGCVKCGCGEDSCRNCDLLQHDHPTNQSLWCNAEEMGWFQDTTPPFDRCQNCPESMVNKPDADIGSDWL 4145
BLAST of mRNA_S-ischiensis_contig14.3312.1 vs. uniprot
Match: A0A8J2SH87_9STRA (Hypothetical protein n=6 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH87_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.520e-9 Identity = 120/465 (25.81%), Postives = 193/465 (41.51%), Query Frame = 1
Query: 1 RPQRLTVLLCIMMGHLFINA-FLYM-----------NVQTDPNASTSQKIGDKVYFAVVAAICSTPIGIILVLLFKRTGTMIPNEDVYMSAPPEQIPEGLRDLVEHRKRIRQAEADVHEARSAMKATQGLLQVTLKQALIEAQRAGEGDLTQEKKVHLKQEFE-AAVRINQKALLSARAALKLAEEEQKQYKQHFAADLEHELNEMVKDLSGFARI--------KKRHALKKQKMHEVHMSNLTKQERELLQAQDEELLKLKKAARLLYKKFLHSSTRKVAQ-TSAVWPDWVTYIVYMTGVAYCAGCGYYVLMFSIFLNKCGDCPCGTDS----------------------CDAYAADD----DFDYDTC-----------------ITCP------------------DPMTNNGGGAAEDWLQTIIVTFALGFVVSEPMTILAKRAIMPLVARVAILRSRGG 1146
R +R+TVL ++ L NA FL + ++ P+ T+ KV ++ +AA+ ST + LF +TG + D ++ P + R V R+R+ A A + AR A KA L L++ A +GDL + + + ++ E + + ++++A SA +K E E K+ + F + E E +D + A + K +H + K VH LT ER L++A+DEEL KL K ARLLY++F+ V TSA W + +Y+ + GC YV +F+I +NKCG C D C A DD D D C + CP P N G A WL+ +++ L +S ++I + ++P++AR A+L + G
Sbjct: 12651 RAERVTVLAVLIFATLAANALFLSVAPPFTIGGTEASIHNAPHRPTTHVA--KVAYSSIAAMFSTFFYLGFAFLFSKTGEKNSDVDHFLGVDPGNLARENRVRVRKRRRVLDALAALDHARDAQKAVFHDLAEELQRL---HHFAKDGDLGEARALTSQEHHEFSQLCVSKRA--SAAEEVKRCEGELKRAELAFK-NFSKECKER-RDRAHKATLEPPSTLWQKVKHKVLPPKPPPVHC--LTLDERALIEAEDEELKKLPKLARLLYQQFVSPMKDAVKDHTSAGWSPHLNAPIYVLALLVILGCALYVFLFTIQINKCGGCERHNDMFHDPSTKLPRWANTTWAIDENLCRKPAEDDLAFAPCDPDLCLEEQQRCLALPKRKRGDVPCPVSXXXXXXXXXXXXXXYCGPSGGNKGSMA--WLEAALLSIVLALFISNTISIFMSKGVVPMLAR-AVLNKQAG 13101
BLAST of mRNA_S-ischiensis_contig14.3312.1 vs. uniprot
Match: A0A1V9ZA26_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA26_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.080e-5 Identity = 51/189 (26.98%), Postives = 83/189 (43.92%), Query Frame = 1
Query: 577 MVKDLSGFARIKKRHALKKQKMHEVHMSNLTKQERELLQAQDEELLKLKKAARLLYKKFLHSSTRKVAQTSAVWPDWVTYIVYMTGVAYCAGCGYYVLMFSIFLNKCGDCPCGTDSCDAYAADDDFDYDTCITCPDPMTNNGGGAAEDWLQTIIVTFALGFVVSEPMTILAKRAIMPLVARVAILRSRG 1143
+V L+G R KKR+ L + ++ L ER++ +A++ +L KL ARLLY L T +V+ S V+P WV +++ A Y++++FS+ + G A W+ ++ AL VVSEP+ IL K ++PL+A A+L G
Sbjct: 2574 LVNQLAGLERWKKRYQLYCEAQRATQLAQLPLHERQMFEAEEAKLQKLTAPARLLYNSVLRRQTDRVS--SPVFPPWVHHVLAALCYGVVAFALYFIVLFSLLV-------------------------------------GASVALHWVGSVAAGLALTHVVSEPVGILLKVGVLPLLA-TALLSGSG 2722 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig14.3312.1 >prot_S-ischiensis_contig14.3312.1 ID=prot_S-ischiensis_contig14.3312.1|Name=mRNA_S-ischiensis_contig14.3312.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=445bp RPQRLTVLLCIMMGHLFINAFLYMNVQTDPNASTSQKIGDKVYFAVVAAIback to top mRNA from alignment at S-ischiensis_contig14:1611901..1613827- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig14.3312.1 ID=mRNA_S-ischiensis_contig14.3312.1|Name=mRNA_S-ischiensis_contig14.3312.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1927bp|location=Sequence derived from alignment at S-ischiensis_contig14:1611901..1613827- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig14:1611901..1613827- >mRNA_S-ischiensis_contig14.3312.1 ID=mRNA_S-ischiensis_contig14.3312.1|Name=mRNA_S-ischiensis_contig14.3312.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2670bp|location=Sequence derived from alignment at S-ischiensis_contig14:1611901..1613827- (Schizocladia ischiensis KU_0333)back to top |