mRNA_S-ischiensis_contig13.2925.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: D8LKZ4_ECTSI (Flagellar/basal body protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ4_ECTSI) HSP 1 Score: 196 bits (499), Expect = 3.590e-55 Identity = 89/129 (68.99%), Postives = 104/129 (80.62%), Query Frame = 1
Query: 148 WYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSGMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKNRPFYTLSFCFQ 534
WY PTGP DDT++FESRFESGNLR A +IG SEYNL LAFDINTDRHTQWFYF MSN R GR YKLN+QNLMK+++VYN GMQPL YSE+ A +EGVGW+R G + YFKN + R +PF+TL+F Q
Sbjct: 4 WYSPTGPEDDTVMFESRFESGNLRSAERIGESEYNLQLAFDINTDRHTQWFYFRMSNLRRGRPYKLNMQNLMKTEAVYNLGMQPLAYSESRAEQEGVGWYRTGSDACYFKNQLTRAGLKPFWTLTFTVQ 132
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: A0A7S0UY76_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UY76_9CHLO) HSP 1 Score: 159 bits (402), Expect = 1.120e-45 Identity = 72/132 (54.55%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 133 EEMLPWYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSG-MQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKNRPFYTLSF 525
+++ PWY P G SD TLVFESRFESGNLR AV++ P EY+L L D+NT HTQWF+F++ N R G +Y+LN+ NL+K DS+Y SG M PL++SE R GVGWHR+ E V Y+ N + R + + +YTL+F
Sbjct: 1 DDIPPWYTPKGLSDMTLVFESRFESGNLRRAVQVYPHEYDLILRPDVNTRGHTQWFFFAIMNSRKGMKYRLNLINLLKEDSLYGSGGMMPLVHSEKTFRACGVGWHRSAERVAYYPNQIRRSRGKKYYTLTF 132
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: A8HSR5_CHLRE (Flagellar/basal body protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HSR5_CHLRE) HSP 1 Score: 164 bits (416), Expect = 1.300e-45 Identity = 76/132 (57.58%), Postives = 94/132 (71.21%), Query Frame = 1
Query: 148 WYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSGMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKN------RPFYTLSF 525
WY P GP D TLVFESRFESGNLR AV++ P EY+L L DINT HTQWF+FS++N R G RYKLN+ NL+K DS+YN GMQPL++S G+GWHRAG V Y+ N + RG+N + +YTL+F
Sbjct: 4 WYAPRGPDDHTLVFESRFESGNLRRAVQVYPYEYDLILRPDINTRGHTQWFFFSIANTRAGCRYKLNLINLLKEDSLYNDGMQPLVHSAKAQAGRGLGWHRAGSRVAYYGNTIRRGRNGAGAGGKTYYTLTF 135
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: A0A7S0TYR6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TYR6_HEMAN) HSP 1 Score: 167 bits (422), Expect = 5.440e-45 Identity = 81/158 (51.27%), Postives = 109/158 (68.99%), Query Frame = 1
Query: 67 VYDSLVLPPYAKDWLAQGATPREEMLPWYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSGMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKNRPFYTLSFCFQFP 540
V+DS+ P +K A P ++ ++ +GP DDTL+FESRFESGNLR A++I PSEY+L L DINT HTQW+YFS+SN R GR+YK N+ NL+K DSVYN G++PL+YSE G+GWHR G ++ Y++N + R K +YTL+F FP
Sbjct: 190 VFDSIEPNPASKSKGKDAAQPVKQ---YWELSGPEDDTLIFESRFESGNLRRAIQIYPSEYDLILRPDINTRGHTQWYYFSVSNVRRGRKYKFNLINLVKPDSVYNQGLRPLIYSEAEQSASGLGWHRTGVDIAYYQNNIKR-KGGAYYTLTFTVTFP 343
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: A0A835W4C5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835W4C5_9CHLO) HSP 1 Score: 167 bits (424), Expect = 1.090e-44 Identity = 78/136 (57.35%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 136 EMLPWYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSGMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKN------RPFYTLSF 525
+M WYVP GP D TLVFESRFESGNLR AV++ P EY+L L DINT HTQWF+FS++N R G RYKLN+ NL+K DS+YN GMQPL++S G+GWHRAG V Y+ N++ RG+N + +YTL+F
Sbjct: 359 DMPAWYVPRGPDDHTLVFESRFESGNLRRAVQVYPYEYDLILRPDINTRGHTQWFFFSIANTRAGCRYKLNLINLLKEDSLYNDGMQPLVHSAKAQASRGLGWHRAGSRVCYYGNSIRRGRNGAGAGGKTYYTLTF 494
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: A0A7S1SKU0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SKU0_9CHLO) HSP 1 Score: 162 bits (409), Expect = 1.790e-44 Identity = 83/167 (49.70%), Postives = 106/167 (63.47%), Query Frame = 1
Query: 58 HEHVYDSLVLPPYAKDWLAQGATPREEM-----LPWYVPTGP-SDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSGMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKNRPFYTLSFCFQFP 540
+E VYD++ P+ ATP E LP+Y+ P +D TLVFESRFESGNLR AV++ EY+L L DINT HTQWFYFS+SN R G R K NI NLMK DS+Y GMQPL++S + G GWHR+GE + Y++N + R + +YTL+F FP
Sbjct: 160 NEVVYDAVDPSPFHARMQDDSATPLEPPPDGAPLPYYISADPETDTTLVFESRFESGNLRRAVQVYEYEYDLVLRPDINTKGHTQWFYFSISNTRRGSRVKFNIINLMKEDSLYGEGMQPLVHSAKESVAAGTGWHRSGELITYYQNNIRRKNGKYYYTLTFTLSFP 326
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: D8TSC0_VOLCA (Uncharacterized protein FBB117 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TSC0_VOLCA) HSP 1 Score: 162 bits (409), Expect = 2.580e-44 Identity = 73/130 (56.15%), Postives = 95/130 (73.08%), Query Frame = 1
Query: 139 MLPWYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSGMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKN-RPFYTLSF 525
M WY P G SDDTLVFESR+ESGNLR A+++ P EY+L L DINT HTQWF+FS++N R G RYK NI NL+K DS+YN GMQPL++S G+GWHRAG + Y+ N + RG++ + ++TL+F
Sbjct: 1 MAAWYTPRGQSDDTLVFESRYESGNLRRAIQVYPYEYDLILRPDINTRGHTQWFFFSIANTRAGCRYKFNIINLLKEDSLYNDGMQPLVHSAKAQAGRGLGWHRAGTRICYYANTIRRGRSGKTYFTLTF 130
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: A0A7S3FA06_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FA06_9VIRI) HSP 1 Score: 160 bits (405), Expect = 3.040e-44 Identity = 77/155 (49.68%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 76 SLVLPPYAKDWLAQGATPREEMLPWYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSGMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKNRPFYTLSFCFQFP 540
+ V PP A A ++ P+Y PTGP D TLVFESRFESGNLR A+++ EY+L L DINT HTQWFYF++ N R G RYKLNI NL+K DS+Y GM+PL+YS A G W RAG+ + Y++NA+ R +YTL+ + P
Sbjct: 176 AFVRPPAAAAGAAGEQREHVDLPPYYTPTGPEDTTLVFESRFESGNLRRAIQVYEHEYDLILRPDINTRGHTQWFYFAIRNARRGVRYKLNIINLVKPDSLYQQGMRPLMYSAREAAASGASWRRAGDSICYYQNAIKRKGASCYYTLTMTVECP 330
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: A0A2K3CZS5_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CZS5_CHLRE) HSP 1 Score: 165 bits (418), Expect = 6.960e-44 Identity = 77/136 (56.62%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 136 EMLPWYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNSGMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKN------RPFYTLSF 525
+M WY P GP D TLVFESRFESGNLR AV++ P EY+L L DINT HTQWF+FS++N R G RYKLN+ NL+K DS+YN GMQPL++S G+GWHRAG V Y+ N + RG+N + +YTL+F
Sbjct: 375 DMPAWYAPRGPDDHTLVFESRFESGNLRRAVQVYPYEYDLILRPDINTRGHTQWFFFSIANTRAGCRYKLNLINLLKEDSLYNDGMQPLVHSAKAQAGRGLGWHRAGSRVAYYGNTIRRGRNGAGAGGKTYYTLTF 510
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Match: A0A250X4W7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X4W7_9CHLO) HSP 1 Score: 165 bits (417), Expect = 9.450e-44 Identity = 74/132 (56.06%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 136 EMLPWYVPTGPSDDTLVFESRFESGNLRGAVKIGPSEYNLTLAFDINTDRHTQWFYFSMSNGRPGRRYKLNIQNLMKSDSVYNS--GMQPLLYSENLAREEGVGWHRAGEEVVYFKNAVLRGKNRPFYTLSF 525
++ PWY+PT SD+TLVFESRFESGNLR V++ P+EY+L L D+NT HTQWFYFS+ NGR G RYK N+ NLMK DS+Y+ GM PL++S+ G GWHRAGE+V Y+ N + RG+++ + TL+F
Sbjct: 493 DLPPWYMPTSCSDNTLVFESRFESGNLRRVVQVYPNEYDLILRPDVNTRGHTQWFYFSIMNGRKGERYKFNLINLMKDDSLYDGDGGMLPLVHSQKELESSGTGWHRAGEKVAYYANTIRRGRHKRYCTLTF 624 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.2925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig13.2925.1 >prot_S-ischiensis_contig13.2925.1 ID=prot_S-ischiensis_contig13.2925.1|Name=mRNA_S-ischiensis_contig13.2925.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=187bp EGGGAGAGAGAGAGMAGDGHEHVYDSLVLPPYAKDWLAQGATPREEMLPWback to top mRNA from alignment at S-ischiensis_contig13:669309..674235+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig13.2925.1 ID=mRNA_S-ischiensis_contig13.2925.1|Name=mRNA_S-ischiensis_contig13.2925.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4927bp|location=Sequence derived from alignment at S-ischiensis_contig13:669309..674235+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig13:669309..674235+ >mRNA_S-ischiensis_contig13.2925.1 ID=mRNA_S-ischiensis_contig13.2925.1|Name=mRNA_S-ischiensis_contig13.2925.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1122bp|location=Sequence derived from alignment at S-ischiensis_contig13:669309..674235+ (Schizocladia ischiensis KU_0333)back to top |