mRNA_S-ischiensis_contig13.2867.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig13.2867.1
Unique NamemRNA_S-ischiensis_contig13.2867.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: D7G3L9_ECTSI (Monooxygenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L9_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.700e-70
Identity = 132/239 (55.23%), Postives = 158/239 (66.11%), Query Frame = 3 
Query:  417 GSTPASVDVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQ--VAASSVWVTESPPSFLP 1127
            G+    VD VVVGAGQAGLS+AYHL+R G +R V LD+N   GGAWRHRWPSLELFSTR WSSLPG PM+ + +    YP+T EM  YM+EYE VM LN+VRPV VT V R   G+ LV TD   L+G                         ++E R V+SAAGTH+SP WP L G   F G Q+HS++YR A+ FRGK+V VVG GNSGAQILAEVS   VA+S++W T + PSFLP
Sbjct:   67 GAGATRVDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDC--LLGG---------------------TVARWEARTVISAAGTHASPVWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVVGSGNSGAQILAEVSAPGVASSTLWSTLTAPSFLP 282
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: A0A1E4GUP9_9CAUL (Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Phenylobacterium sp. SCN 70-31 TaxID=1660129 RepID=A0A1E4GUP9_9CAUL)

HSP 1 Score: 189 bits (480), Expect = 2.890e-53
Identity = 110/238 (46.22%), Postives = 138/238 (57.98%), Query Frame = 3 
Query:  420 STPASVDVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE 1133
            S+P S DV+V+G GQAGL++ Y L R G +R+ ++D    PGGAWRH W SL LFS   WSSLPG PM    S    YPT  E++ Y+  YE    L ++RP EV  V   A G+L+V T                              P  +  RAVVSA GT  +P+WP       F GVQ+HSA+YR  E F+G+RV+VVGGGNSGAQI AEVSQVA  + WVT  PP+FLP++
Sbjct:    4 SSPTSFDVIVIGGGQAGLAIGYFLRRTG-LRFAIVDGEPDPGGAWRHGWDSLRLFSPAEWSSLPGWPM---PSSGEAYPTRDEVIAYLTAYEARYELPVIRPAEVDLVHAEA-GALVVET-----------------------------CPATWRTRAVVSATGTWRAPYWPPYPDQPRFEGVQIHSAQYRNPEVFKGQRVLVVGGGNSGAQIFAEVSQVA-DATWVTPEPPTFLPDD 206
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: A0A069I6L1_9BURK (Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Cupriavidus sp. SK-3 TaxID=1470558 RepID=A0A069I6L1_9BURK)

HSP 1 Score: 186 bits (471), Expect = 5.720e-52
Identity = 110/233 (47.21%), Postives = 135/233 (57.94%), Query Frame = 3 
Query:  435 VDVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE 1133
            +DV+V+G GQ+GL++ Y L R   + +V+LDS   PGGAW+H W SL LFS   WSSLPG PM   R+    YP+   ++ Y+  YEE   L + RPV V SV R     ++V TD G                              +  RAVVSA GT   P WP   GA  F GVQLHSA YR A+ F GKRV+VVGGGNSGAQILAEVSQVA  +VW T+ PP FLP++
Sbjct:    4 IDVLVIGGGQSGLAVGYFLRRT-TLSFVILDSEPSPGGAWQHAWDSLRLFSPAQWSSLPGYPM--PRAGDDTYPSKDHVLRYLAAYEERYALPVKRPVVVQSVARDGE-RMIVQTDSG-----------------------------SYAARAVVSATGTWRHPFWPHYPGAADFHGVQLHSAHYRSADAFAGKRVLVVGGGNSGAQILAEVSQVA-DTVWATKEPPLFLPDD 202
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: UPI00034A9A18 (ArsO family NAD(P)H-dependent flavin-containing monooxygenase n=4 Tax=Paraburkholderia kururiensis TaxID=984307 RepID=UPI00034A9A18)

HSP 1 Score: 185 bits (469), Expect = 1.350e-51
Identity = 112/236 (47.46%), Postives = 139/236 (58.90%), Query Frame = 3 
Query:  426 PASVDVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE 1133
            PA +DVVV+G GQAGL+ AY L R G + Y+VLD  S PGGAWRH W SL LFS   WSSLPG  M         YP+  E++ Y+  YE+   + + RPV V SV R+  GSLLVSTD G                             ++  RAVVSA GT S+P+ P   G   F G Q+HSA+YR A+  RG+ V+VVGGGNSGAQILAEVS V  +++WVT   P FLP++
Sbjct:    2 PADIDVVVIGGGQAGLATAYFLRRAG-LDYIVLDDQSAPGGAWRHTWDSLHLFSPAQWSSLPGWQMPVSNG---TYPSRDEVIAYLARYEDRYHIPVRRPVHVKSVSRV-QGSLLVSTDRG-----------------------------EWLARAVVSATGTWSAPYVPDYPGREIFRGRQMHSAQYRNADDLRGQNVLVVGGGNSGAQILAEVSTVC-NAMWVTLHDPVFLPDD 202
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: A0A0N1BDK8_9HYPH (Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Bosea sp. AAP35 TaxID=1523417 RepID=A0A0N1BDK8_9HYPH)

HSP 1 Score: 183 bits (464), Expect = 5.720e-51
Identity = 108/233 (46.35%), Postives = 133/233 (57.08%), Query Frame = 3 
Query:  435 VDVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE 1133
            +DVVV+G GQAGL+ AY L R G +R+ +LD   GPGGAWRH W SL LFS   WSSLPG PM    +    YP    ++ Y+  YE   G NI RPVEV +V R   G   ++TD G                               + RAV+SA GT   P WP       FGG Q+HSA+YR   +F G+RV+VVGGGNSGAQILAE+S + A + WVT +PPSFLP+E
Sbjct:    5 LDVVVIGGGQAGLACAYFLRRAG-LRFSILDGEPGPGGAWRHAWDSLRLFSPAQWSSLPGWPM---PASPDGYPARDAVIDYLTRYEARYGFNIERPVEVEAVAREGDG-FSIATDSG-----------------------------PRKARAVISATGTWRQPFWPDYPDQALFGGRQIHSADYRTPTEFAGQRVLVVGGGNSGAQILAELS-LMADATWVTATPPSFLPDE 202
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: A0A4Q3XXT4_9PROT (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A4Q3XXT4_9PROT)

HSP 1 Score: 182 bits (462), Expect = 1.460e-50
Identity = 109/231 (47.19%), Postives = 130/231 (56.28%), Query Frame = 3 
Query:  438 DVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPE 1130
            DVVV+G GQAGL+  Y L R G + +V+LD  S PGGAWRH WPSL LFS  HWSSLPG PM    +    YPT + ++ Y+  YE    L +VRPVEV++V R     L V T  G                              +  RA+VSA GT  SPH P   G   F G QLHSA Y G E F G+ V+VVGGGNSGAQILAE+S VA + +WVT   P FLP+
Sbjct:   10 DVVVIGGGQAGLATGYFLRRSG-LSFVILDGESAPGGAWRHAWPSLRLFSPAHWSSLPGWPM---PACDEGYPTREHVIDYLARYETRYALPVVRPVEVSAV-RTDQDRLAVETSQG-----------------------------SWSARAIVSATGTWRSPHVPAYPGQETFRGRQLHSANYAGPESFAGQTVLVVGGGNSGAQILAEISTVATT-IWVTPKEPVFLPD 205
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: UPI0005A9393A (ArsO family NAD(P)H-dependent flavin-containing monooxygenase n=1 Tax=Paraburkholderia heleia TaxID=634127 RepID=UPI0005A9393A)

HSP 1 Score: 181 bits (460), Expect = 2.870e-50
Identity = 111/237 (46.84%), Postives = 138/237 (58.23%), Query Frame = 3 
Query:  426 PASVDVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHD-YPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE 1133
            PA +DVVV+G GQAGL+ AY L R G + Y+VLD+ S PGGAW+H W SL LFS   WSSLPG  M       HD YP+  E++ Y+  YEE   + + RPV V SV R+  G LLVSTD G                             ++  RAVVSA GT S+P+ P   G   F G Q+HSA+YR  +  RG+ V+VVGGGNSGAQILAE+S V   + WVT   P FLP++
Sbjct:    2 PAKLDVVVIGGGQAGLATAYFLRRAG-LDYLVLDNQSAPGGAWQHTWDSLHLFSPSQWSSLPGWQM----PVTHDTYPSRNEVIDYLARYEERYHIPVRRPVHVKSVSRV-QGGLLVSTDRG-----------------------------EWIARAVVSATGTWSAPYVPDYPGREIFSGRQMHSAQYRNPDDLRGQNVLVVGGGNSGAQILAEISTVC-DATWVTPQEPVFLPDD 202
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: A0A512DYN6_9PROT (Monooxygenase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DYN6_9PROT)

HSP 1 Score: 182 bits (461), Expect = 2.900e-50
Identity = 108/232 (46.55%), Postives = 132/232 (56.90%), Query Frame = 3 
Query:  438 DVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE 1133
            DVVV+G GQAGL++ YHL R G + +V+LD+ + PGGAWRH W SL  FS   WSSLPG PM    +    YP   E++ Y+  YE    L + RPV V SVE   +G L V TD G                              +  R VVSA GT    H P   G   FGGVQ+HSA Y   E F G+RV++VGGGNSGAQILAEVS+ AA++ WVTE PP FLP++
Sbjct:    6 DVVVIGGGQAGLAVGYHLRRTG-LSFVILDAGTSPGGAWRHTWQSLRPFSPAPWSSLPGWPMAGGET---TYPGRDEVLDYLARYETRYDLPVRRPVSVRSVEHAGNGHLRVVTDRG-----------------------------DWTARMVVSATGTWRRTHIPDYPGRDVFGGVQIHSAAYETPEPFAGRRVLIVGGGNSGAQILAEVSKTAATT-WVTEKPPVFLPDD 203
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: A0A2N7W6H4_9BURK (Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Trinickia soli TaxID=380675 RepID=A0A2N7W6H4_9BURK)

HSP 1 Score: 181 bits (460), Expect = 3.020e-50
Identity = 109/235 (46.38%), Postives = 139/235 (59.15%), Query Frame = 3 
Query:  435 VDVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPG--LPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE 1133
            VDVVV+G GQAGL+ +Y L R   + YVVLD  S PGGAWRH W SL LFS   WSSLPG  +P  QD     +YP+  E++ Y+ +YEE     ++RPV V SV RL  G LLV+TD G                             ++  +AVVSA GT S+P+ P   G   F G Q+HSA+YR   +F+G++V+VVGGGNSGAQILAEVS+    + WVT   P FLP++
Sbjct:    5 VDVVVIGGGQAGLATSYFLRRAA-IDYVVLDDQSAPGGAWRHTWDSLHLFSPAQWSSLPGWLMPASQD-----EYPSRNEVIEYLTKYEERYQFPVLRPVHVLSVSRLTKG-LLVTTDRG-----------------------------EWSAKAVVSATGTWSAPYIPAYPGCEVFRGRQMHSAQYRSPNEFQGQQVLVVGGGNSGAQILAEVSK-ECKATWVTLHEPVFLPDD 202
[Close]
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Match: A0A2A2FQH8_9PSED (Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Pseudomonas sp. WN033 TaxID=2032629 RepID=A0A2A2FQH8_9PSED)

HSP 1 Score: 181 bits (459), Expect = 3.130e-50
Identity = 111/232 (47.84%), Postives = 135/232 (58.19%), Query Frame = 3 
Query:  438 DVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSGPGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQEYEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGXXXXXXXXXXXSSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEYRGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE 1133
            DV+V+G GQAGL+ AY L R   + Y+VLD     GGAWRH W SL+LFS   WSSLPG PM   ++   D+P   E++ Y+Q YEE   + + RPV VTSV      SLLV TD G                              +  RAV+SA GT S P  P L G+  F G QLHSAEY   E F G+RV+V+GGGNSGAQI AEVS+VA +S WVT  PP+FLP+E
Sbjct:    4 DVLVIGGGQAGLATAYFLRRH-KLDYLVLDREPAAGGAWRHGWDSLQLFSPAQWSSLPGWPMPATKNP--DWPHRDEVIAYLQAYEERYQIPVRRPVMVTSVSAEPE-SLLVETDQG-----------------------------SYRARAVISATGTWSQPFIPELPGSQVFQGRQLHSAEYLNPEAFVGQRVLVIGGGNSGAQIYAEVSEVATAS-WVTREPPNFLPDE 201
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.2867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3L9_ECTSI1.700e-7055.23Monooxygenase, putative n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1E4GUP9_9CAUL2.890e-5346.22Pyridine nucleotide-disulfide oxidoreductase n=1 T... [more]
A0A069I6L1_9BURK5.720e-5247.21Pyridine nucleotide-disulfide oxidoreductase n=1 T... [more]
UPI00034A9A181.350e-5147.46ArsO family NAD(P)H-dependent flavin-containing mo... [more]
A0A0N1BDK8_9HYPH5.720e-5146.35Pyridine nucleotide-disulfide oxidoreductase n=1 T... [more]
A0A4Q3XXT4_9PROT1.460e-5047.19NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Alphap... [more]
UPI0005A9393A2.870e-5046.84ArsO family NAD(P)H-dependent flavin-containing mo... [more]
A0A512DYN6_9PROT2.900e-5046.55Monooxygenase n=1 Tax=Skermanella aerolata TaxID=3... [more]
A0A2N7W6H4_9BURK3.020e-5046.38Pyridine nucleotide-disulfide oxidoreductase n=1 T... [more]
A0A2A2FQH8_9PSED3.130e-5047.84Pyridine nucleotide-disulfide oxidoreductase n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig13contigS-ischiensis_contig13:74876..81577 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score239.6
Seed ortholog evalue1.9e-60
Seed eggNOG ortholog2880.D7G3L9
EggNOG free text desc.N,N-dimethylaniline monooxygenase activity
EggNOG OGsCOG2072@1,KOG1399@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionFAD-dependent pyridine nucleotide-disulphide oxidoreductase
Ec32 orthologEc-07_000710.1
Exons6
Model size1133
Cds size894
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815680.3791754-CDS-S-ischiensis_contig13:74875..749321622815680.3791754-CDS-S-ischiensis_contig13:74875..74932Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 74876..74932 -
1695739846.4287717-CDS-S-ischiensis_contig13:74875..749321695739846.4287717-CDS-S-ischiensis_contig13:74875..74932Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 74876..74932 -
1622815680.3894122-CDS-S-ischiensis_contig13:75965..762391622815680.3894122-CDS-S-ischiensis_contig13:75965..76239Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 75966..76239 -
1695739846.4481325-CDS-S-ischiensis_contig13:75965..762391695739846.4481325-CDS-S-ischiensis_contig13:75965..76239Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 75966..76239 -
1622815680.3989518-CDS-S-ischiensis_contig13:77677..778031622815680.3989518-CDS-S-ischiensis_contig13:77677..77803Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 77678..77803 -
1695739846.4647076-CDS-S-ischiensis_contig13:77677..778031695739846.4647076-CDS-S-ischiensis_contig13:77677..77803Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 77678..77803 -
1622815680.4137673-CDS-S-ischiensis_contig13:78364..784621622815680.4137673-CDS-S-ischiensis_contig13:78364..78462Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 78365..78462 -
1695739846.4772844-CDS-S-ischiensis_contig13:78364..784621695739846.4772844-CDS-S-ischiensis_contig13:78364..78462Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 78365..78462 -
1622815680.4255116-CDS-S-ischiensis_contig13:79021..791351622815680.4255116-CDS-S-ischiensis_contig13:79021..79135Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 79022..79135 -
1695739846.4875498-CDS-S-ischiensis_contig13:79021..791351695739846.4875498-CDS-S-ischiensis_contig13:79021..79135Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 79022..79135 -
1622815680.4376516-CDS-S-ischiensis_contig13:81113..813381622815680.4376516-CDS-S-ischiensis_contig13:81113..81338Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 81114..81338 -
1695739846.4976163-CDS-S-ischiensis_contig13:81113..813381695739846.4976163-CDS-S-ischiensis_contig13:81113..81338Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 81114..81338 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815680.4500487-UTR-S-ischiensis_contig13:81338..815771622815680.4500487-UTR-S-ischiensis_contig13:81338..81577Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 81339..81577 -
1695739846.5063071-UTR-S-ischiensis_contig13:81338..815771695739846.5063071-UTR-S-ischiensis_contig13:81338..81577Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 81339..81577 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig13.2867.1prot_S-ischiensis_contig13.2867.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig13 74876..81338 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig13.2867.1

>prot_S-ischiensis_contig13.2867.1 ID=prot_S-ischiensis_contig13.2867.1|Name=mRNA_S-ischiensis_contig13.2867.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=298bp
MSLASRVLSRASVPLGASSIRPRKAGSARGFSTPGILHEAQIGGLSVVNG
AVSVNRTVNGSTPASVDVVVVGAGQAGLSLAYHLERQGNVRYVVLDSNSG
PGGAWRHRWPSLELFSTRHWSSLPGLPMYQDRSQMHDYPTTQEMVWYMQE
YEEVMGLNIVRPVEVTSVERLASGSLLVSTDGGGLMGSGGPSSSSCSSST
SSRGLTPPTAPVQFECRAVVSAAGTHSSPHWPGLAGAHAFGGVQLHSAEY
RGAEQFRGKRVVVVGGGNSGAQILAEVSQVAASSVWVTESPPSFLPEE
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mRNA from alignment at S-ischiensis_contig13:74876..81577-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig13.2867.1 ID=mRNA_S-ischiensis_contig13.2867.1|Name=mRNA_S-ischiensis_contig13.2867.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6702bp|location=Sequence derived from alignment at S-ischiensis_contig13:74876..81577- (Schizocladia ischiensis KU_0333)
GTCACATTCGTGTCGAGCGGCCGCCTTCTGGAAGACCGCTGCTTTCGTGG
GACATCACCTCGCCACCGTCGTGGCGATCCTGGGGCACGCATCGCGGTAT
TCTACCCGGGGAAGGCTCTCCTGCGCACGGGGGCATTGCGGAGGACGAAG
AACAGGGTCGGTCCTGAAGCGCTGGACGGTCTTCGTCGCCGCGAACCCAT
ATTCTGCGCGTGCTGACCAGGGTTGACCACCCTGGTTGGATGTCTCTGGC
TTCTCGGGTGTTGTCGCGGGCCTCCGTGCCCTTAGGCGCCTCCTCTATCC
GTCCGCGGAAGGCGGGTTCTGCTCGCGGGTTCAGCACCCCCGGCATCCTG
CATGAGGCCCAAATCGGGGGACTCTCGGTCGTGAACGGCGCGGTCTCGGT
CAACCGTACGGTCAATGGAAGCACGCCGGCATCGGTGGACGTGGTCGTGG
TAGGCGCTGGGCAGGTGAGATCCCCCGACGCGTCCCAGCCAGCCCCTTCG
GTTCTGGCGGCCAGGTTCGCGGCCAGGGCGGTGCTTTCCGCGACCGGGCG
GAATCAGGCGGCAAACGCCATCCGCATTTGTACGCAGCTGAACGGTCCGT
GCGATAGAGTTCCAGCACCCCCTGCGCTTTGATGCTCGAGCCCCATGCTC
GAGCCCCACGGGGGGCTCTTCCACCCCCTGCCGCCGCGGCTAGTGCCGAA
AATGTGCCCCCTCTTGCTTGCAGAGGGGACCAGGACGGGCTGTTTTTTGC
GCCCCCGTGCAGCACGGTGCCGATTTCCCCCCGATCCCCCGCCCCGCCGT
CACGGCCCGCCCACCCAAACAGCACGAACAACCGGGGCGGAGCACCTTGC
GCATGAACTCTTATACGATGTAGCCGGGGTGTGCGCGCGCGCCCGATGGC
CCAAGCTCCCCCCCGGCAGAATCAGCCATTGAGCCATTTGACTGCCACCC
GCCCTGTCGCACCAGGACTTTTTTTTTTTTTGGGGGTGCGCCCCCGAGGA
GTAGACAAGGGGGTGTGCGCTTGCTTGTCGCCGTGTATGTGCGTAGTATA
CGCGCATCTCCTGCACGGCGGGCGAGGCGCGCAAAGGCTTGGCGTGAGTG
AATGTCACGAGTGCAAGTAAGGGCCGTTCTTAGCGCACCGAAAAACGGCA
CTTTTTGTGTCAAAACGGCGTAAAACACGCGCACATCGGTGGCGCATTTT
GGGACGTCGACCGACCCGCCCCCGACGGCGGGTCAGTCGACGGCGTAAAT
GCGGCGTCCAAAAGTGCCGATGTCGACTCCAACGTATCGGTAATCTGAAA
TCGAGAATCGGACGCTACTTACACCAAGATGTATCACGACGCCGTTCACA
CGAAATTGGACCTGATTATTGCTGCGCGCATGCAGGGCGCGTTGGCGCCA
TCGGCGCTGATCGGCGCCATCGAACAAGTCGCCATTTTTTTCGTCCAGGA
GGAGTTCAAACGGCACAAAAAGTGGCGTTGTGGGCGCTGTTAAGAACGGC
CCGAAGTAAGAGAACAGGGTAGTGGGTGGGGAGAGGCGTCCGGCGGGGAG
AAGGGTTTTGTGCGCGTGGTGGCGGGCGTGCAGGCGGGTGGCCACTCGCC
GGAGCTTTTCGTCCTGCTCGAGGAACAGCGGTACGCTGGTTCCCCATTAG
ACCGCGCGCGCCTCTGGTAGAGCCCCCTGCGCCCAAGGCCGATGTACAGC
TGCAGGCGCCCTCCCGCCCCTGGCAGAGCCAGATGGGGTGGGGGAGGCCA
ACCCTCGCGCATGCGCGGGGGGGGGGAGGCAGTTCCATTCCCCCCGCCCA
CGTGCCTGGCTCGCGAGAATCAGGTCGCCCCCCCCCAGCCCCCACCGCTG
CCTGGCGCATGACTTGGTGTGTGCTCTCTACCGTAATCGTCGGAGAGATC
TTGCCCCGCCGTGCCAGTTGTCGGGAGGGCGTTTCTCGCGAAATACTGGC
CGGATTCGCGCAGGAAAACTCGGAACTCCTCTTCCTAGGTTCCCTGGGGG
GGGGAACTTTTCCGAGGGCTTTCGGTAAAAATTCAGGACCTTCCTTCCCC
CGGGGCGAGAAATGTTCCCGTCGAAAATGGCCCGCGGGGGGTACAATCCC
TCTGACGATTGCGGTGTGTGTGTGTGTGTGCTCGCGTTCGGACGAGGTTG
CTCGCCTCTGTGCATGCCCTGGACCCCAACGATCCTCGTCTTTGCTCCTC
GTGGATCGCTGGCCAGCTAAAGCCGAAGCCATTGGCGACGCTTTTGTTTT
TTTGACGGTACTCTATTCATGCTTCCTGTTGTGCACGTGTGCTCGGTGTG
CTTGGCAGGCGGGTTTTTCCCTGGCATATTTACTGAATTAGGTGTAATTA
ATGGTATTGAGACCTAACATGAAGGCTAATTACTCCCTAATTACCCTCTA
AGTTCCAACCCTGTCTGCACGTGTGCTCGGGGCGCGTGGCAGGCGGGTTT
GTCCCTGGCGTATCACCTGGAGCGGCAGGGCAACGTGCGCTATGTCGTGC
TGGACAGCAACAGCGGCCCGGGGGGGGCGTGGAGGCACCGCTGGCCCTCC
CTCGAGGTGAGTTAAGCGGATCTTTTAGGTGTCTCGCACGTGGTGAAGAC
CCTCCTATCTCAGTCGAGGCGTGTGTGCGCAGAACTCTTCTCGACGAGAC
TACGGTAGCTACTGTAGGCAGTGTTCGTTTGCACCAACCCCTCGCCGTGC
ACCGCGCCTCTCTGCACACTTGCAGCTCTTCTCGACGAGACTAGGGTAAC
GTGGCTGAGCCGTGTTCATTGCCGCTTGCTGCGCTCTCTGGACACGCAAT
TGAGCTCATCTCTACGAGACTAGGGTAGCTAAGCAGTGCTCTCTCTCTCT
TTCTCTCTCTCTCTCTCCCTCTCTCTCTCCCTCCCTCCCCCCCCCCCCCC
TCTCTCAACAACCCCTCGCCGCTTGCCGCCCTCTCTGCACACTTGCAGCT
CTTCTCTACGAGACTAGGGTAGCTAAGCAGTGCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCCCTCCCTCCCT
CCCTGCGCCCCCCCCCCTCTCTCAACAACCCCTCGCCTCTGGCCGCCCTC
TCTGCGCACCTGCAGCTCTTCTCGACTCGGCACTGGAGCTCCCTCCCGGG
CCTGCCCATGTACCAGGACCGCTCGCAGATGCACGACTACCCCACCACGC
AGGAGATGGTGTGGTGAGTTTCAGCCCCATTCTGTTCAGCCTGCTCACGT
GGTGCTTGCTGTAGTCCCGAGACCATTGACCCCGCGCCTCGTGCGAGGCG
GAGCATGATGCGAGAGTATATACATATGCCATGATGCGAGAGCATATATG
TACTCACGTGGTGCTTGCCATAGTCCCGAGACCATCGACCACGGGCCTCG
GTCGAGACGGAGCAGGTCCATGGCTAAGTAGCGACCCCTGTCGGAGGGCA
AACCCGAAGTTTCGGCTTGGGGCTGTCGGCATTGCACGCAAGGTTATGCC
GCAAGACAAGCCAATGAAATGAGTACATATATGTATATATACTTGCTCAA
CTCGTGCTCGACACGCCGTTTCGCGACGAGCGTCTGCTGCCAGGTACATG
CAGGAGCACGAGGAGGTCATGAGCCTCAACATTTGTGCGCTTAGTTGAAA
AGTCAGGTACATACTACTGTACAGTGGTAGTTTACTGGTTTAGAGTAGTA
CGAGTACTCACGCAGCTCGTGCTCGGCTCGTGCTCCTGGCACCCGCTCCA
CAACGACCACCTATCTGCTGGCAGGTATATGCAGGAGTACGAGGAGGTCA
TGGGCCTCAACATCGTGCGCCCCGTTGAGGTCACGTCGGTCGAGCGGCTG
GCGTCGGGCTCTCTGCTGGTCTCCACCGACGGAGGAGGGCTCATGGGGAG
GTGAGTGCGTGCCCATGTGCGCGCGCGCGCGTGTGTGTGTGTGTGTGTGC
GCGCGCGCGCGCGCCCGTGGTTGGGTTAGTTGCGCGTGGCGGTTTGTTGC
GGATTGGGGGGGGCTGAGCGGGGATCGAGCGCGCATTCGTGTTCGTGTGT
GTGTGTGTGTGTGTGTGTGCGCGCGCACGTGCCGTATTTGCCGAGTGGTC
TTCAATGCACTCGCGTTGTGCTTGCCGCGGTTCCGAGAATGTTGACCGCG
CCCCCTACCGATACCCAGAGCGTAGAGCAATAGCGTATCTACTGTGCGTT
GAGAGTGCAATTCCATCCTCCAGGGTTGGAAACAGCACACGCGTACAGTC
GCTTGTCCGAGGGGTTGGGCGCCGGCCCGGTTGCCCTCCGCCAGTGATGG
AATATCGATCCGCAGATAGTTATCGGGCTCGAGTGATTTTGTGGGTGGCA
CTGCTAACTACTTGGATGTAGTGTGGGTCAAACTATCGAACATTGACTAG
CGATAGATTATAGATCAGCACTGTCGATAAATGGGTTGAATTGCTTAGAT
ATTCCATCACTGCGCTCCGCATCTGCTATCATCGCCCAACTGGAGTACTA
GCAGTACCTACCCGTAGAGTAAGTATGTGGGCCTGCCGCAGAGCTTGCGC
TGGGATGAAAGCCAACCTATGGTATGGAATCTGGAAGCTGTTGTGCGTAC
TCACGTCTCTGTGCATGCCCCGGACCCGAACGATCCTCGTCTGTGCTCCT
TCTCGACAATGGTAATCCCTTCTGTGCCCACCATGCAACGTACGCCGCGC
TTGCGCTTGCTCTCCTCAGGGATTTTGTCAGGCTGCTCACCTTTTCCTTT
CCCAATCCCCCCGCTCTGCCCGCGCCCCTCCGTCTGCCCCCGCTGCGTAT
CTTGTCAACTGTGTTTAACTGTCCCTCCCCCGTCTACCTAAAAAATCTAC
ATGGCTCGCCGTCGGCGGAAACCTGATGCGTCATCCATCGCTGCCACGGA
CTACTCCACCTACCTACAACTACGTGCTGCAAACGACGATGGCGACGCTC
GCTCATGCGTGCATGCTTGCACCAACCGACCGACCGACACATGCATGCAC
GCGCCCACGCACCCGCCCCATCTTGTCTTACGACACGCACGCACACATCA
ACCGCCCCCAACACATATACCTCAAACCACTTCACTCAACCACGCCACGC
CACGCCAATGCACCACGCACGCGCGCCTGCCCGCCGTGCGTGTACACTCG
CAACAAACGCATACGTACACACAAACCCGCACGCGCGCACGCGCCCACCC
ACCCACGCGCCCTACACCTGATGGTATGTACGCCCGCCGTGCGTGTTCAC
ACATACAAACACGCGCCCACGCACGTGCCCACGCACCCACACCTATAATG
GCATATATGGATTCCCGGGCCGCCGCACCCCCAAGCAGTGGCGGCCCGTC
GTCCTCCTCCTGCTCTTCCTCTACCTCGTCAAGGGGCCTTACCCCTCCCA
CGGCCCCCGTGCAGTTTGAGTGCCGGGCGGTGGTGAGCGCCGCGGGCACC
CACAGCTCCCCCCACTGGCCGGGGCTGGCCGGGGCGCACGCCTTCGGAGG
GGTGCAACTCCATTCGGCGGAGTACCGGGGGGCAGAGCAGTTCCGGGGGA
AGCGGGTGGTGGTGGTGGGCGGGGGGAACAGCGGCGCGCAGATCCTGGCA
GAGGTGTCGCAGGTGATGAGGAAGGCGTTTGTCTCTCTCTCTGTGTTTGT
GATGCGATGTGATGTGATGCAATGCGATGTGATGGGGGGAACAGCGGCGC
GCAGATCCTGGCGGAGGTGTCGCAGGTGATTAGGAAGGCGTTGATGTGAT
GATGTGATGTGATGTGAGGTCAAACTACTGTACATTGGGGCACGCATCAC
ATCACATCAGGCTGTGTCTGTGCGTGTGATGTGATGTGATATTATGGGGG
GAACAGCGGCGCGCAGATCCTGGCGGAGGTGTCGCAGGCGACGAAGACTA
CTTGTCCTTTGAGAAACGAGTCTGCGATCTACTTGGGTTCATCGAAAATC
ACTCTCTGAACTGCTTGGACTTTGCGAAGTGGGAGAAGGCTGTGCCTCTC
TGTGTGTATGTCTGTGTCGTGTGTGTGATGCGATGCAATGTGATGTGATG
TGAACAGCGGCACGCAGATCCTGGCGGAGGTGTCGCAGGTGATTAGGAAG
ACTACTTGGACTTTTGAGAAACGAGCTCTGAACTGCTGGGGTTCATTGAA
AATCACTCTCCGAACTACTTGGACTTTGTGAAACGAGAGAAGGCTGTGTC
TGTGTGTATGCGATGTGATGTGATGCGATACGATGTGATGATGTGATGTG
ACGTGAACAGCGGCGCGCAGATCCTGGCGGAGGTGTCGCAGGTGATGAGG
AGGGCTGTGTGTGTGTGTGTGTGCGTGTGTGCTTGTGTGTTATGTGATGT
GATGTGATGTGCACACAATCTCACCGTCTCTTCAACATCACATCACATCA
TGTTGTCGGTGTGTGTTGTGATGTGATGCGGTGCGATGCGGTGTGATGTG
ATGTGATGCGATGTGACGTGATGTGCACACAATCTCACGTTCTCTCTGAC
ATCACATGGCCACCGTGTGTGTTTTGTGTGTGCGAGGCGATGCGATGTGT
GTTTAATGCGGGATGAAGTGTCCCGTCGTCCGCGAAGAGCTAACCCGACC
TGACCCTGAAGTAACGCAACCCCTCTGTTGTTGTCCGACCAACAGGTGGC
GGCTTCGTCTGTGTGGGTGACCGAGTCGCCCCCGTCCTTCCTCCCGGAGG
AG
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Coding sequence (CDS) from alignment at S-ischiensis_contig13:74876..81577-

>mRNA_S-ischiensis_contig13.2867.1 ID=mRNA_S-ischiensis_contig13.2867.1|Name=mRNA_S-ischiensis_contig13.2867.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1788bp|location=Sequence derived from alignment at S-ischiensis_contig13:74876..81577- (Schizocladia ischiensis KU_0333)
ATGTCTCTGGCTTCTCGGGTGTTGTCGCGGGCCTCCGTGCCCTTAGGCGC
CTCCTCTATCCGTCCGCGGAAGGCGGGTTCTGCTCGCGGGTTCAGCACCC
CCGGCATCCTGCATGAGGCCCAAATCGGGGGACTCTCGGTCGTGAACGGC
GCGGTCTCGGTCAACCGTACGGTCAATGGAAGCACGCCGGCATCGGTGGA
CGTGGTCGTGGTAGGCGCTGGGCAGATGTCTCTGGCTTCTCGGGTGTTGT
CGCGGGCCTCCGTGCCCTTAGGCGCCTCCTCTATCCGTCCGCGGAAGGCG
GGTTCTGCTCGCGGGTTCAGCACCCCCGGCATCCTGCATGAGGCCCAAAT
CGGGGGACTCTCGGTCGTGAACGGCGCGGTCTCGGTCAACCGTACGGTCA
ATGGAAGCACGCCGGCATCGGTGGACGTGGTCGTGGTAGGCGCTGGGCAG
GCGGGTTTGTCCCTGGCGTATCACCTGGAGCGGCAGGGCAACGTGCGCTA
TGTCGTGCTGGACAGCAACAGCGGCCCGGGGGGGGCGTGGAGGCACCGCT
GGCCCTCCCTCGAGGCGGGTTTGTCCCTGGCGTATCACCTGGAGCGGCAG
GGCAACGTGCGCTATGTCGTGCTGGACAGCAACAGCGGCCCGGGGGGGGC
GTGGAGGCACCGCTGGCCCTCCCTCGAGCTCTTCTCGACTCGGCACTGGA
GCTCCCTCCCGGGCCTGCCCATGTACCAGGACCGCTCGCAGATGCACGAC
TACCCCACCACGCAGGAGATGGTGTGCTCTTCTCGACTCGGCACTGGAGC
TCCCTCCCGGGCCTGCCCATGTACCAGGACCGCTCGCAGATGCACGACTA
CCCCACCACGCAGGAGATGGTGTGGTATATGCAGGAGTACGAGGAGGTCA
TGGGCCTCAACATCGTGCGCCCCGTTGAGGTCACGTCGGTCGAGCGGCTG
GCGTCGGGCTCTCTGCTGGTCTCCACCGACGGAGGAGGGCTCATGGGGAG
GTATATGCAGGAGTACGAGGAGGTCATGGGCCTCAACATCGTGCGCCCCG
TTGAGGTCACGTCGGTCGAGCGGCTGGCGTCGGGCTCTCTGCTGGTCTCC
ACCGACGGAGGAGGGCTCATGGGGAGTGGCGGCCCGTCGTCCTCCTCCTG
CTCTTCCTCTACCTCGTCAAGGGGCCTTACCCCTCCCACGGCCCCCGTGC
AGTTTGAGTGCCGGGCGGTGGTGAGCGCCGCGGGCACCCACAGCTCCCCC
CACTGGCCGGGGCTGGCCGGGGCGCACGCCTTCGGAGGGGTGCAACTCCA
TTCGGCGGAGTACCGGGGGGCAGAGCAGTTCCGGGGGAAGCGGGTGGTGG
TGGTGGGCGGGGGGAACAGCGGCGCGCAGATCCTGGCAGAGGTGTCGCAG
TGGCGGCCCGTCGTCCTCCTCCTGCTCTTCCTCTACCTCGTCAAGGGGCC
TTACCCCTCCCACGGCCCCCGTGCAGTTTGAGTGCCGGGCGGTGGTGAGC
GCCGCGGGCACCCACAGCTCCCCCCACTGGCCGGGGCTGGCCGGGGCGCA
CGCCTTCGGAGGGGTGCAACTCCATTCGGCGGAGTACCGGGGGGCAGAGC
AGTTCCGGGGGAAGCGGGTGGTGGTGGTGGGCGGGGGGAACAGCGGCGCG
CAGATCCTGGCAGAGGTGTCGCAGGTGGCGGCTTCGTCTGTGTGGGTGAC
CGAGTCGCCCCCGTCCTTCCTCCCGGAGGAGGTGGCGGCTTCGTCTGTGT
GGGTGACCGAGTCGCCCCCGTCCTTCCTCCCGGAGGAG
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