mRNA_S-ischiensis_contig121.2804.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: D7FQQ5_ECTSI (4'-phosphopantetheinyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ5_ECTSI) HSP 1 Score: 181 bits (460), Expect = 1.140e-52 Identity = 103/214 (48.13%), Postives = 137/214 (64.02%), Query Frame = 1
Query: 1 TFTAAALEAAKAQLVPEEVSYALQLPAPTQVCFLGGRAAIRRALEG-----CGQSVEPILRDEFGAPTLPSGVSASVSHKREVAVALVRPGSGISVGVDIEQPAKRRRANLREKVLTLRERQGLGRLPGILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVELLPDQQRGGGNPVWERMRVEAGWRSLPNGLGGPFFVTY 627
T T + AA +L+P+E++Y L LP Q+ FLGGR AIRRAL G S + IL ++ GAP LP GVSAS+SHK+ +AVALV+ G +G+DIE PA +RR +LR +VLT RE LG + G+ +QEEVLLRFS+KEA+YK+ HP + R +GFK+ V P+ G CEV RG W +R+ AGW P+ LG P F++Y
Sbjct: 116 TLTDDVMTAAGEELLPKEMAYCLGLPRALQLGFLGGRLAIRRALNGMEDVSAAASSQAILHNQDGAPVLPEGVSASISHKQHLAVALVQSGCEGHLGIDIELPAVQRRLDLRRRVLTPRECDSLGGVDGMSDQEEVLLRFSMKEAVYKAAHPFLHRPLGFKDVEVQPVRGGGCEVRTTT---RG----AWGGLRLSAGWMFFPDVLGQPLFLSY 322
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: A0A1Z5K268_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K268_FISSO) HSP 1 Score: 130 bits (328), Expect = 7.380e-34 Identity = 81/198 (40.91%), Postives = 119/198 (60.10%), Query Frame = 1
Query: 40 LVPEEVSYALQLPA-PTQVCFLGGRAAIRRALEGCGQSVEPILRDEFGAPTLPSGVSASVSHKREVAVALVRPGSGISVGVDIEQPAKRRRANLREKVLTLRERQGLGRLPGILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVELL-PDQQRGGGNPV-WERMRVEAGWRSLPNGLGGPFFVT 624
L P E+ Y QLP+ T+ F GR A+R+ L+ + EPIL+D +G P LP+G AS+SHK V VAL++ S+GVD+E N+ KVLT E++ LG++P + +EEVLLRFS+KE+LYK++HP++ +VGF++ V P ADG V+LL P+ R + W+RM GP+F++
Sbjct: 75 LHPLELEYGRQLPSFKTRNSFFLGRLALRQVLD----TKEPILKDAYGRPRLPAGYVASISHKGPVGVALLQASMMGSIGVDLEY--SHGNPNVARKVLTPHEQESLGQIPTVTPEEEVLLRFSMKESLYKAMHPYLCHYVGFQQVEVQPTADGRGHVQLLFPNATRLSDVQIYWQRM--------------GPYFLS 252
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: A0A7S3PAQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PAQ3_9STRA) HSP 1 Score: 126 bits (316), Expect = 8.850e-33 Identity = 72/149 (48.32%), Postives = 100/149 (67.11%), Query Frame = 1
Query: 85 TQVCFLGGRAAIRRALEGCGQSVEPILRDEFGAPTLPSGVSASVSHKREVAVALVRPGSGI-----SVGVDIEQPAKRRRANLREKVLTLRERQGLGRLPGILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVEL 516
TQ F+GGR A+R+A+E C IL+D G P +P S+SHK +VAVA+V P + ++GVD+E K R + + ++LT+ E+ LG + GIL +EEVLLRFSLKEALYK++HP + ++VGF+EA V PLA+GT VEL
Sbjct: 12 TQKSFVGGRLALRKAME-CQMHDCVILKDAHGRPNIPRSFRGSISHKGDVAVAMVAPATTERETVWAIGVDLEVRQKGR-SRIGNRILTVSEQGNLGFVDGILAEEEVLLRFSLKEALYKAMHPLICQYVGFQEAEVQPLANGTVHVEL 158
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: A0A4D9CTH4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTH4_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.620e-32 Identity = 87/208 (41.83%), Postives = 127/208 (61.06%), Query Frame = 1
Query: 40 LVPEEVSYALQLP-APTQVCFLGGRAAIRRALEGCGQSV---EPILRDEFGAPTLPSGVSASVSHKREVAVALVR-----PGSGIS-VGVDIEQPAKRRRAN-LREKVLTLRERQGLGRLP--GILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVELLPDQQRGGGNPVWERMRVEAGWRSLPNGLGGPFFVT 624
L P+E+ A+ + +++ FLGGR A+RR+L Q + + +LRDE GAP LPS V AS+SHK+++A+ L+R P +S +GVDIE R N + +VLT RE+ LG L GI + E+LLRFSLKE++YK+I+P +RR+V F+EA V+P DGT + LL + G ++E E W+ + NG FF+T
Sbjct: 94 LHPKELDLAMTMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLL--LKGGAAEGLFE---AEGHWQQVDNGR---FFLT 293
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: W7TPT1_9STRA (4-phosphopantetheinyl transferase entd n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT1_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.280e-31 Identity = 87/208 (41.83%), Postives = 126/208 (60.58%), Query Frame = 1
Query: 40 LVPEEVSYALQLP-APTQVCFLGGRAAIRRALEGCGQSV---EPILRDEFGAPTLPSGVSASVSHKREVAVALVR-----PGSGIS-VGVDIEQPAKRRRAN-LREKVLTLRERQGLGRLP--GILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVELLPDQQRGGGNPVWERMRVEAGWRSLPNGLGGPFFVT 624
L P+E+ A+ + +++ FLGGR A+RR+L Q + + +LRDE GAP LPS V AS+SHK+++A+ L+R P +S +GVDIE R N + +VLT RE+ LG L GI + E+LLRFSLKE++YK+I+P +RR+V F+EA V+P DGT + L + G ++E E WR + NG FF+T
Sbjct: 178 LHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTIVLF--LKGGAAEGLFE---AEGHWRQVDNGR---FFLT 377
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: A0A1E7EU12_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU12_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.910e-31 Identity = 76/187 (40.64%), Postives = 108/187 (57.75%), Query Frame = 1
Query: 97 FLGGRAAIRRALEGCGQSVEPILRDEFGAPTLPSGVSASVSHKREVAVALVRPGSGI-----------SVGVDIEQPAKRRRANLREKVLTLRERQGLGRLPGILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVELLPDQQRGGGNPVWERMRVEAGWRSLPNGLGGPFFVT 624
F GR AIR AL PIL+D++G P + GV S+SHK E VAL+ + VG+D+E ++ R+N+ ++VLT+ ERQ LG +PGI EEVLLRFSLKEA+YK+ HP + ++VGF+EA V+P ADGT L D + +++ A W+ + + G FF+T
Sbjct: 11 FWLGRLAIRIALNFPDY---PILKDQYGRPLMIQGVYGSISHKEERGVALISLPEPVIDASDSNVRLAGVGIDLEMTSRPGRSNVSKRVLTINERQSLGNIPGITIDEEVLLRFSLKEAIYKAAHPLLCQYVGFQEAEVTPFADGTASCIWLLDTKADK-----RIVKLTAHWKKV---VDGQFFLT 186
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: A0A7S1U184_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U184_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.650e-31 Identity = 90/203 (44.33%), Postives = 116/203 (57.14%), Query Frame = 1
Query: 97 FLGGRAAIRRALEGCG-QSVEPILRDEFGAPTLPSGVSASVSHKREVAVALVRPGSGIS------VGVDIEQPAKRRRANLREKVLTLRERQ--GLGRL-PGILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGT--CEVELLPDQQRGGGNPVWERMRVEAGWRSL-------------PNG-LGGP-FFVT 624
FL GR A+RR LE G V PIL+D FGAPTLP VS S+SHK VA+AL SG +GVDIEQ + ++ +VLTL ER+ +G L + + EVLLRFSLKE+LYK++HP ++R++ F E V PL DG C L+P + V +RVEA WR+L P+G LG P FF+T
Sbjct: 137 FLAGRLAMRRCLEAGGVPPVGPILKDCFGAPTLPQHVSGSISHKTPVALALCAERSGAPSGVREHLGVDIEQRLRPSSVDISRRVLTLEERKQVAMGLLGERVPPESEVLLRFSLKESLYKALHPIIQRYIAFHEFEVKPLPDGRTLCRPLLMPPPEESHPGSV---LRVEAHWRTLGGEDANPRAPADAPSGQLGQPRFFLT 336
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: A0A7S1BC96_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BC96_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.540e-30 Identity = 75/165 (45.45%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 70 QLPAPT-----QVCFLGGRAAIRRALEGCGQS----VEPILRDEFGAPTLPSGVSASVSHKREVAVALV--------RPGSGISVGVDIEQPAKRRRANLREKVLTLRERQGLGRLPGILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVE 513
+LP PT + FL GR A+R + + V PILRD G P LPSG S+SHK+ +A ALV + +GVDIE+ + + L +VLT RER LG +PG+ E EEVLLRFSLKE+LYK++HP F+GF+E V P DGT EVE
Sbjct: 193 ELPEPTGQERNALSFLLGRTAMRHGIRQISRESLVVVPPILRDGHGRPALPSGYVGSISHKQTLAAALVDLDDDNFWKRDRVRGIGVDIERVMSKSGSALGRRVLTERERGALGNIPGVTELEEVLLRFSLKESLYKALHPLFETFIGFQEVEVQPCPDGTAEVE 357
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: A0A7S2A1R9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1R9_TRICV) HSP 1 Score: 119 bits (299), Expect = 2.140e-29 Identity = 75/162 (46.30%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 148 SVEPILRDEFGAPTLPSGVSASVSHKREVAVALV------------RPGSGISVGVDIEQPAKRRRANLREKVLTLRERQGLGRLPGILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVELLPDQQRGGGNPV------WERMRVEAG 579
S PILRD G PT+P G S+SHKR VALV RP G VGVDIEQ + RR ++ KVLT E LG+L G+ EEVLLRFSLKE++YK++HP + +++GF+EA + PL DGT V L D + G + + W RMRV G
Sbjct: 128 SFPPILRDGHGRPTVPDGFLGSISHKRVTGVALVSRDDDNKGGKRGRPRRG--VGVDIEQ-TRSRRMSIERKVLTKGELDDLGKLEGVTRSEEVLLRFSLKESVYKALHPLLTQYIGFQEAEIVPLPDGTARVAL--DLKTGAQDRLGYVGAHWRRMRVRRG 284
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Match: A0A448YUC1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUC1_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.960e-29 Identity = 81/201 (40.30%), Postives = 116/201 (57.71%), Query Frame = 1
Query: 49 EEVSYALQLPAPTQVCFLGGRAAIRRALEGCGQSVEPILRDEFGAPTLPSGVSASVSHKREVAVALVR--------PGSGIS-VGVDIEQPAKRRRANLREKVLTLRERQGLGRLPGILEQEEVLLRFSLKEALYKSIHPHVRRFVGFKEASVSPLADGTCEVELLPDQQRGGGNPVWERMRVEAGWRSLPNGLGGPFFVT 624
+E+ + + L T+ F GR A+R AL G PI+RD +G P L G S+SHK+ VAL PG+ S VGVD+E ++ R +L ++VLT ER+ LG +PGI EEVLLRFSLKEA+YK+ HP + ++VGF+EA V+PL DGT L + G + + + A WR++ +G +F+T
Sbjct: 139 DEIEFGMTLK-QTRNSFWLGRLAMRMAL---GYPGYPIVRDYYGRPRLREGAFGSISHKKGRGVALASHSVADPGLPGAIFSGVGVDLEMTSRPGRPSLAKRVLTASERESLGGIPGIAADEEVLLRFSLKEAIYKAAHPLLCQYVGFQEAEVTPLPDGTASCSWLLES--GADDRI---AGLTAHWRTIDDGA---YFLT 327 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig121.2804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig121.2804.1 >prot_S-ischiensis_contig121.2804.1 ID=prot_S-ischiensis_contig121.2804.1|Name=mRNA_S-ischiensis_contig121.2804.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=209bp TFTAAALEAAKAQLVPEEVSYALQLPAPTQVCFLGGRAAIRRALEGCGQSback to top mRNA from alignment at S-ischiensis_contig121:75322..78057- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig121.2804.1 ID=mRNA_S-ischiensis_contig121.2804.1|Name=mRNA_S-ischiensis_contig121.2804.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2736bp|location=Sequence derived from alignment at S-ischiensis_contig121:75322..78057- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig121:75322..78057- >mRNA_S-ischiensis_contig121.2804.1 ID=mRNA_S-ischiensis_contig121.2804.1|Name=mRNA_S-ischiensis_contig121.2804.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1254bp|location=Sequence derived from alignment at S-ischiensis_contig121:75322..78057- (Schizocladia ischiensis KU_0333)back to top |