mRNA_S-ischiensis_contig119.2502.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig119.2502.1
Unique NamemRNA_S-ischiensis_contig119.2502.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A0A7S3FZ71_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3FZ71_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 3.500e-16
Identity = 61/227 (26.87%), Postives = 102/227 (44.93%), Query Frame = 1 
Query:  193 AYANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKDLINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVDRSKGDMGRF------ISEDQLEEAFGGRIRVG 855
            A+  + C+ RYLR RNW A++A   +  T+ +R          S  F  +               ++E   G   + GRD  GRP+LVM  +          +K L+  LE+ + S+     +  + ++D +G SL + PPP         L++HYP RL QA +++ P  F + +  V   +DP T+ K+  + R   +   F      I  DQ+   +GG + +G
Sbjct:   51 AFCTESCMIRYLRARNWKATKAEKMLRDTLSFRRKFDF----ASLNFEVV---------------KKEGETGKMFTLGRDKYGRPILVMRPKYENNKGSMDNLKLLVYNLERITESM-VNDCEKLILIIDYNGYSLRNAPPPKVSLETLSILQNHYPERLGQAYMVEAPMLFNVLWKIVYPFIDPVTKKKIHFLKRKTKEELPFPSLFDQIERDQILTDYGGTMELG 257
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A9TG24_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TG24_PHYPA)

HSP 1 Score: 82.4 bits (202), Expect = 2.860e-14
Identity = 62/206 (30.10%), Postives = 92/206 (44.66%), Query Frame = 1 
Query:  196 YANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKDLINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVDRSKGDMGRFISE 813
            +A+D C+RRYLR RNW   +A   ++ T+ WR  +  +    S+          GE E  GK         +  +  +D  G  VLVM       ++P   +K L+  LE A  +L     +  +WL+D  G S+    P          L++HYP RL  AVL +PP  F   +  V+  LDP T  KV  V     +  + +SE
Sbjct:   47 FADDACLRRYLRARNWNIKKAEKMLKDTLAWRESYKPEDIRWSDI--------AGESE-TGK---------IYRASIKDKNGHTVLVMHPGRQNTSNPEMQIKQLVYFLENAVLNLPE-GQEQMIWLIDFKGWSMKKSTPIGLARETANILQNHYPERLHVAVLYNPPRLFEAFWTIVKPFLDPKTFRKVKFVYSKNAESQKILSE 233
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A0A4Y7LGT6_PAPSO (CRAL-TRIO domain-containing protein n=4 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LGT6_PAPSO)

HSP 1 Score: 80.5 bits (197), Expect = 6.240e-14
Identity = 70/261 (26.82%), Postives = 110/261 (42.15%), Query Frame = 1 
Query:   79 LDEDEFMDEQVAKVQ--RMVLGEPPDLNPSSAARWKACATAYANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKDLINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLV----DRSKGDMGRFISEDQLEEAFGGR 843
            +D+    DEQ  KV   R ++G   +  P+  +           D  + RYLR R W   +A   + +T KWR+++  +Q              T           R + P        D  GR VLVM          +G MK L+  +E A  +L   S +  +W++D  G ++  V   +  E   + L+DHYP RL QA+L +PP  F   +  V+   +  T +K+  V      S+  MG     ++LE A GG+
Sbjct:   11 VDKTSQNDEQQVKVNEVREMIGSTANELPTLFS-----------DASILRYLRARKWNTKKACQMLRETAKWRMEYKPEQICWDEIAHEAETGKT----------YRSNYP--------DKYGRTVLVMRPGLQNTYSTSGQMKFLVYCMENAIMNLPP-SEEQMVWIIDFQGWNMSSVSIKTTRET-ARILQDHYPERLGQAILYNPPKIFESFWMLVKPFFEARTSSKIKFVYSNDPESQKFMGDLFDMEKLESALGGQ 240
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A0A4P9XY68_9FUNG (CRAL-TRIO domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XY68_9FUNG)

HSP 1 Score: 78.6 bits (192), Expect = 1.050e-12
Identity = 72/268 (26.87%), Postives = 111/268 (41.42%), Query Frame = 1 
Query:   88 DEFMDEQVAKVQRMVLGEPPDLNPSSAARWKACATAYANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKDLINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVD------RSKGDMGRFISEDQLEEAFGGRIRVG-PGARQ 870
            +E   EQ  ++ R+    P  + P  +   +     +  D C+ RYLR   W    A   + KT+ WR +H           L  PA             E E+  G  +  G DL G PV+ +T R          +  +I  LE+A  ++     +    +VD +G S+ + P P   + +   L  HYP RL  AVL+  P +F   Y  V  L+DP T+ K+ +VD      R+    G   S +  + +  GR  V  PG R+
Sbjct:  103 NEMTTEQQLRLDRVRQKLPSLIAPPGSPLHEE-DVIFCTDCCLARYLRASQWDTDVATERLAKTLVWRHEH--------RPHLLSPAYV-----------ESEAVTGKIIVDGFDLKGGPVIYITPRLENTKSSQRQIDHMIFFLERAV-AVMPPGVEKLTLIVDFAGSSVFNSPAPWVAKSVVSILDQHYPERLNAAVLVGTPWYFNQLYKLVSPLIDPITKQKIHVVDLGRRKRRTNTSSGPSGSGEGGQTSSKGRRHVSMPGLRR 349
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A9TWR4_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWR4_PHYPA)

HSP 1 Score: 74.7 bits (182), Expect = 4.920e-12
Identity = 58/213 (27.23%), Postives = 93/213 (43.66%), Query Frame = 1 
Query:  196 YANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKDLINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVDRSKGDMGRFISEDQLEEAF 834
            +A+D C++RYLR RNW   ++   ++ ++ WR  +  +    S+                    E E+    R +  +D  G  V+VM     +  +P   +K L+  LE A  +L     +  +WLVD  G S+    P       T  L++ YP RL  AVL +PP  F   +  V+  LDP T  KV  V     +  + ++E   E+A 
Sbjct:   19 FADDNCLKRYLRARNWNLKKSEKMLKDSLAWRESYKPEDIRWSDIA-----------------NESETGKIYRANI-KDKKGHSVIVMHPGRQSTYNPELEIKQLVYFLENAILNLPE-GQEQMIWLVDFKGWSMKKSTPIGLARETTNILQNQYPERLHVAVLYNPPRLFEAFWTLVKPFLDPKTFRKVKFVYSKNPESQKILAEYFEEDAI 212
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: UPI001FB0DFA4 (phosphatidylinositol transfer protein 3-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0DFA4)

HSP 1 Score: 74.7 bits (182), Expect = 7.860e-12
Identity = 58/223 (26.01%), Postives = 95/223 (42.60%), Query Frame = 1 
Query:  196 YANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKDLINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVDRSKGD----MGRFISEDQLEEAFGGRIRV 852
            Y N+ C++RYL  RNW   +A   +E++IKWR  +  ++            A  GE   I K   ++          RD  GR VL+M           G ++ L+   E    +L     +   WL+D +G ++    P S    +   L++HYP RL + +L +PP  F   +  V+  +D  T  K+  V   + D    M      + L   FGG++ +
Sbjct:   43 YCNEACLKRYLEARNWNVDKAKKMLEESIKWRATYKPEE------IRWHEVAQVGETGLISKANFQD----------RD--GRSVLIMRPGMQKTKAGEGNLRHLVYLSENVILNLPE-DKEQMTWLIDFTGWTMNTNVPISVARDIINVLQNHYPERLGEVILYNPPRIFEAFWKAVKLFVDAKTSKKMKFVYPKRKDCEEVMNSSFDIESLPVEFGGKVHL 246
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A0A5J5B650_9ASTE (CRAL-TRIO domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5B650_9ASTE)

HSP 1 Score: 74.7 bits (182), Expect = 1.380e-11
Identity = 67/259 (25.87%), Postives = 112/259 (43.24%), Query Frame = 1 
Query:   91 EFMDEQVAKVQRMVLGEPPDLNPSSAARWKACATAYANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKDLINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLV----DRSKGDMGRFISEDQLEEAFGGRIRVG 855
            E   E++ +++R+V   P  L+             Y +D  + R+LR  NW  ++A   +++ +KWRL++  ++            A TG+               +  S   D  GR VLVM          +  ++ L+  +E A  +L   + +  +WL+D  G +L ++    + E     L+ HYP RL  A+L +PP FF   Y  V+  L+  T  KV  V      +K  M      +QL+ AFGG+   G
Sbjct:   28 EEQQEKINELRRLVGPLPDKLS------------CYCSDALISRHLRAWNWNINKATKMLKENLKWRLEYKPEEIRWDEVACE---AETGK---------------IYRSNYVDKHGRTVLVMRPSCQNSKSTSAQIRYLVYCMENAILNLPQ-NQEQMIWLIDFHGFNLSNISFKVSRET-AHVLQVHYPERLGDAILYNPPKFFEPFYRLVKPFLEQKTANKVKFVYSDDPNTKKIMEDLFDIEQLDSAFGGKDNTG 254
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A0A2K1KW88_PHYPA (CRAL-TRIO domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KW88_PHYPA)

HSP 1 Score: 74.7 bits (182), Expect = 1.510e-11
Identity = 58/213 (27.23%), Postives = 93/213 (43.66%), Query Frame = 1 
Query:  196 YANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKDLINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVDRSKGDMGRFISEDQLEEAF 834
            +A+D C++RYLR RNW   ++   ++ ++ WR  +  +    S+                    E E+    R +  +D  G  V+VM     +  +P   +K L+  LE A  +L     +  +WLVD  G S+    P       T  L++ YP RL  AVL +PP  F   +  V+  LDP T  KV  V     +  + ++E   E+A 
Sbjct:   47 FADDNCLKRYLRARNWNLKKSEKMLKDSLAWRESYKPEDIRWSDIA-----------------NESETGKIYRANI-KDKKGHSVIVMHPGRQSTYNPELEIKQLVYFLENAILNLPE-GQEQMIWLVDFKGWSMKKSTPIGLARETTNILQNQYPERLHVAVLYNPPRLFEAFWTLVKPFLDPKTFRKVKFVYSKNPESQKILAEYFEEDAI 240
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BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A0A813D0A9_9DINO (PitC protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813D0A9_9DINO)

HSP 1 Score: 74.3 bits (181), Expect = 2.160e-11
Identity = 80/262 (30.53%), Postives = 119/262 (45.42%), Query Frame = 1 
Query:  124 RMVLGEPPDL-----NPSSAA-------RWKA--------CATAYANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTV-RGMAWADPAGWMKDLINALEQASRSLSATSS------DSWLWLVDLSGCS-LLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVDRSKG----DMGRFISE 813
            RMVLG PP        PS+ +       R +A        CA A+A+D CV+RYLR  N     AA ++  T+KWR      + +  +A    P +                   MR+  G D  GRPVL  +  + +  ADPA  M+ L   LE AS +L++ ++      +SW+ + D  G S  +D  P +AL      L  HYP RL + +L+D P  F   ++ V ++L+  T +KV  V    G    D+  + SE
Sbjct:    8 RMVLGCPPPTLTLHHKPSAMSTTDLAVRRVRAQLGSVEDSCA-AFADDACVKRYLRACNGDVQSAAGALAATLKWRQQTRPAE-VECSACAQSPHSHN-----------------MRMV-GTDASGRPVLYTSYNQALNRADPAKNMEHLTRTLEDASAALASRAARGEGLAESWVLVCDFHGYSWFVDTDPRAAL--FAARLLAHYPERLGRCLLVDAPSIFSGTWSAVRRILNEVTASKVQFVRTDDGSFQADLKSWASE 247
[Close]
BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Match: A0A152A0K2_9MYCE (Cellular retinaldehyde-binding/triple function domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A0K2_9MYCE)

HSP 1 Score: 72.4 bits (176), Expect = 1.050e-10
Identity = 71/283 (25.09%), Postives = 116/283 (40.99%), Query Frame = 1 
Query:   31 SRPTLRSAGMAPARHRLDEDEFMDEQVAKVQRMVLGEPPDLNPSSAARWKACATAYANDGCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPTGEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMK--DLINALEQASRSLSATSS-DSWLWLVDLSGCSLLDVPPPSALERLTQTLRDHYPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVDRSKGDMGR--------FISEDQLEEAFGGRI 846
            S PTL S         L+E +       K     L +P D+             A+ ND C+ RYLR RN+  +++   I  +++WR  +   Q +      AI                  +  G      +D  GRP+++   R     D  G +K   L+  LE   +++   +  +++ ++VD  G S  ++   + LE +   L DH P RL QA+ +DPP  FW+A+  +   L+  T +KV  V   K   G         +I    LE+  GG +
Sbjct:   15 STPTLGSTQTFNPFKNLNEKQMEAFNEIKSNLSDLTDPEDI-------------AFINDMCLLRYLRARNYTVAKSEKMIRDSLEWRKKNR-PQDICLKDLKAI------------------ANTGCLYIHSKDKKGRPIILARPRRDTVKDVPGDIKFKHLVYWLESGFKNMDYNNGVETFCFIVDYHGFSRGNMDMKTNLESM-HFLLDHCPERLGQAIFLDPPTLFWIAWKIISPFLNEVTMSKVKFVYSKKDKDGNRVFPELLEYIDATSLEKDLGGEM 264
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig119.2502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A7S3FZ71_9EUKA3.500e-1626.87Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A9TG24_PHYPA2.860e-1430.10Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A4Y7LGT6_PAPSO6.240e-1426.82CRAL-TRIO domain-containing protein n=4 Tax=Papave... [more]
A0A4P9XY68_9FUNG1.050e-1226.87CRAL-TRIO domain-containing protein n=1 Tax=Thamno... [more]
A9TWR4_PHYPA4.920e-1227.23Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
UPI001FB0DFA47.860e-1226.01phosphatidylinositol transfer protein 3-like n=1 T... [more]
A0A5J5B650_9ASTE1.380e-1125.87CRAL-TRIO domain-containing protein n=1 Tax=Nyssa ... [more]
A0A2K1KW88_PHYPA1.510e-1127.23CRAL-TRIO domain-containing protein n=1 Tax=Physco... [more]
A0A813D0A9_9DINO2.160e-1130.53PitC protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]
A0A152A0K2_9MYCE1.050e-1025.09Cellular retinaldehyde-binding/triple function dom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig119contigS-ischiensis_contig119:53650..59135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score92.0
Seed ortholog evalue4.5e-16
Seed eggNOG ortholog3827.XP_004509254.1
EggNOG free text desc.CRAL-TRIO domain-containing protein C23B6.04c-like
EggNOG OGs37M33@33090,3G7C9@35493,4JGFY@91835,KOG1470@1,KOG1470@2759
COG Functional cat.I
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size911
Cds size816
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig119.2502.1prot_S-ischiensis_contig119.2502.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig119 53688..59078 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815630.683183-UTR-S-ischiensis_contig119:53649..536871622815630.683183-UTR-S-ischiensis_contig119:53649..53687Schizocladia ischiensis KU_0333UTRS-ischiensis_contig119 53650..53687 -
1695739815.3356395-UTR-S-ischiensis_contig119:53649..536871695739815.3356395-UTR-S-ischiensis_contig119:53649..53687Schizocladia ischiensis KU_0333UTRS-ischiensis_contig119 53650..53687 -
1622815630.7814844-UTR-S-ischiensis_contig119:59078..591351622815630.7814844-UTR-S-ischiensis_contig119:59078..59135Schizocladia ischiensis KU_0333UTRS-ischiensis_contig119 59079..59135 -
1695739815.4501317-UTR-S-ischiensis_contig119:59078..591351695739815.4501317-UTR-S-ischiensis_contig119:59078..59135Schizocladia ischiensis KU_0333UTRS-ischiensis_contig119 59079..59135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815630.6969135-CDS-S-ischiensis_contig119:53687..537081622815630.6969135-CDS-S-ischiensis_contig119:53687..53708Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 53688..53708 -
1695739815.3483567-CDS-S-ischiensis_contig119:53687..537081695739815.3483567-CDS-S-ischiensis_contig119:53687..53708Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 53688..53708 -
1622815630.7082345-CDS-S-ischiensis_contig119:53980..540701622815630.7082345-CDS-S-ischiensis_contig119:53980..54070Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 53981..54070 -
1695739815.3638222-CDS-S-ischiensis_contig119:53980..540701695739815.3638222-CDS-S-ischiensis_contig119:53980..54070Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 53981..54070 -
1622815630.7183607-CDS-S-ischiensis_contig119:54520..545821622815630.7183607-CDS-S-ischiensis_contig119:54520..54582Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 54521..54582 -
1695739815.3748417-CDS-S-ischiensis_contig119:54520..545821695739815.3748417-CDS-S-ischiensis_contig119:54520..54582Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 54521..54582 -
1622815630.7316792-CDS-S-ischiensis_contig119:54846..550211622815630.7316792-CDS-S-ischiensis_contig119:54846..55021Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 54847..55021 -
1695739815.3861232-CDS-S-ischiensis_contig119:54846..550211695739815.3861232-CDS-S-ischiensis_contig119:54846..55021Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 54847..55021 -
1622815630.7427604-CDS-S-ischiensis_contig119:55333..554471622815630.7427604-CDS-S-ischiensis_contig119:55333..55447Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 55334..55447 -
1695739815.3977613-CDS-S-ischiensis_contig119:55333..554471695739815.3977613-CDS-S-ischiensis_contig119:55333..55447Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 55334..55447 -
1622815630.752361-CDS-S-ischiensis_contig119:55820..559551622815630.752361-CDS-S-ischiensis_contig119:55820..55955Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 55821..55955 -
1695739815.4109302-CDS-S-ischiensis_contig119:55820..559551695739815.4109302-CDS-S-ischiensis_contig119:55820..55955Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 55821..55955 -
1622815630.7620065-CDS-S-ischiensis_contig119:56200..562721622815630.7620065-CDS-S-ischiensis_contig119:56200..56272Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 56201..56272 -
1695739815.4228728-CDS-S-ischiensis_contig119:56200..562721695739815.4228728-CDS-S-ischiensis_contig119:56200..56272Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 56201..56272 -
1622815630.7717917-CDS-S-ischiensis_contig119:58931..590781622815630.7717917-CDS-S-ischiensis_contig119:58931..59078Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 58932..59078 -
1695739815.4377234-CDS-S-ischiensis_contig119:58931..590781695739815.4377234-CDS-S-ischiensis_contig119:58931..59078Schizocladia ischiensis KU_0333CDSS-ischiensis_contig119 58932..59078 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig119.2502.1

>prot_S-ischiensis_contig119.2502.1 ID=prot_S-ischiensis_contig119.2502.1|Name=mRNA_S-ischiensis_contig119.2502.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=272bp
MAPARHRLDEDEFMDEQVAKVQRMVLGEPPDLNPSSAARWKACATAYAND
GCVRRYLRTRNWVASRAALSIEKTIKWRLDHGLDQGLGSNAFLAIPAAPT
GEGEGIGKGKERESTPGMRLSPGRDLLGRPVLVMTVRGMAWADPAGWMKD
LINALEQASRSLSATSSDSWLWLVDLSGCSLLDVPPPSALERLTQTLRDH
YPGRLEQAVLIDPPGFFWLAYAFVEKLLDPGTRAKVVLVDRSKGDMGRFI
SEDQLEEAFGGRIRVGPGARQ*
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mRNA from alignment at S-ischiensis_contig119:53650..59135-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig119.2502.1 ID=mRNA_S-ischiensis_contig119.2502.1|Name=mRNA_S-ischiensis_contig119.2502.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5486bp|location=Sequence derived from alignment at S-ischiensis_contig119:53650..59135- (Schizocladia ischiensis KU_0333)
GCGTGAGCGGCAAGGGTTCCCTGTGGACGCTCTCGTCCCACTTTGCGCAG
CGCGGGGATGGCGCCCGCACGCCACCGCCTTGATGAGGACGAGTTTATGG
ACGAGCAGGTGGCCAAAGTGCAGAGGATGGTCTTGGGCGAGCCTCCCGAC
CTCAACCCGAGTTCTGCAGCCCGATGGAAGGCCTGCGCCACCGCTTACGC
GAATGTGAGGAGCATGACGAAAGGATCCCGGCCGACCGGCACACTCGAGC
CCGACGTGATTTCAGACTGTGCAGCTGCGCTCGAGGAACACGCTGCATAG
CGGTTGTTACAGCTATCCGAAGTCCCCTTTCCCCCTCTGCGTTGTCTTGT
GGCCTTGGGAGGATTAGAGGTGAACGTCATGAAGTACTACTCTACTCCTC
CCAAGTTTCCGTCAGTTAGGTACAATAGAGCTCTGGAGCTACAACTACTG
TACGTACTTTGTGCACTTGGTTAGGATCTTATTGCTCGGTGGTGGTGTTG
CTGATTGCGTTACAGGTGGGACCCACGCTCACACGCTGTTGCTGCGTTCA
CGCAGGACTGTGCAGTGGTTGTCTCTGCCGGCACTACGCCGCCGCCAGCT
GCATGGCCCTTCCTCCCGCTCCTCCTCCTGCTGCTAGGGGTGGCGATGCA
CCCGTTACCGGCTCTCGCTTAAGTATGGTTGATAAGAGGTTTCGAGCGTC
CCACGGGAAGAAGCGCTAAAGCCGGCAAAAAACAAGTTGAAACAGGCAAT
GCCTTTCCACGAAACCGGAAATCCATATGAACGCCTTGCAGGTGCCGCAC
GCTCAGTGCCCGGCAGCACCTGTTTGAGGCACAACTGGCCATTTTTGGAA
CAACGGATCTCGTGAACTGCTGCACCTCTTGAGGCCCGGATTGCTCAAGT
GCATTTCGTATACAGTGAACTAGTTACCACGGGTAGTGAATTCACCAGCC
ACCGCAGCTGCGGCGGCCGTGATGACCGACAAGCCCAGAAAGCGTCGGCA
CCCACTAGCACTGATACCGAGCTATGCTGCTCTCTTGTCCGGTCCCACCG
GACCCGACACCCGTGCCGGGTCCGCAGCGACCCGGGGCACCTGTGTGGCG
GCGGGCAGCGGGCCCGGCGGCCAGCGGGGTACGCATCGATGCACCTGAGC
CCTCGGTACTATATGACCATAGTTCGAGGGCCCGGCCCTTTTGGCCTCTG
GACAGACCGACCAACTGCACAACCGTCCGCCGGGTGGGACACAGCTTTAA
CCGTTATCGGCTCTCGATCGCCACCCCTAGCTGCTGCTGCTGCTGCTGCT
GCTGCCCTACCCCCTTTTGATTGGCCTGTGCCTTCTGATTCGCTTTCCGA
GTGAAGTAAGGCCCACCGTGGAGGACATGGGTTTTCTTTAGTGCGGGCAC
TACTACCACAGTATGGCTCCTCCCCTCCCTTACTCGTTCCTTCCGTGGCG
AGCCAAGGAACTGTTGAGGTCCTTAGTGACGTGGTCCGCACTTTGCCCTG
TGTTTTGCCTATCAATACCGCATTATGTACTTACGCTGGTACTGTAGTAA
ATGGTCTCGGGACTACGGCAACACAATGGGAGTACATAAATATATGCTCA
TATGCTTGGCCACCACTCCACATGTGGCGGGGGCGTGGCCACCCCCTCCC
ACCCTGGCGCTGCCAGGGGAGGGAGGGGTCCTGCTCCGTCTCGACCGAGG
CGCGTGGTCAATCGTCTCGGCACTACAGCAAACACAACGTGAGTACATAC
ATATAATCAATGGACTCGGGACTACGGCAAGCACAACGTGAGTATATATA
TACTGCTGTAGTACTTGCAGTACTGCATACCCTACTACGAGTCCTTCCTA
CCACGAAGAAACTCAAAGTGCTGGTGCTACTGTAGCTGCTTATGCTGCGC
TGCTGTTGATGCGAACTGTGCTGTATGTACTATGGCTGGGTGGTCCGGCA
AGTGGTGTACCGGGCCAACGGTCGGTGGCATACTCATACACAGGACACAG
GGGTAACCGTGTCCGACACGAGTGCACACACGGGGCACACACATGTACTC
ACGTGCTTTCCGTAGTCCTGAGCCCATTGACCGTCCGCCTAGGCTGAGAC
GGAGCAGCCCGCCTCCTGCAGGGTGGGAAGGGGATCCCACCGTTCCGCCA
TGGGCGGAGAGGTGGCCAGTTCCGTACCCCCCCTGGTCCTGGACTCGCCA
GAGTCGGGTCGCCCCCATTCTACAGTAGGCCTGGTCCCATCAGGGCAGGG
GAGTACTCACTACTACTTGTGTAGTATACTTCGTATGTACTCATTATTTC
ACTTGCTTCGCCCTCGACGGCGCGTAGTCAATGGTCTGTAGACTACGGCA
AGCACAATGCGAGAATATGTACATGTACTCTAGCTCATATATACTGTGAC
GAGAAAGCTCGTCCGAACATGAGTACTTGTATACGTCGTGCCTACATATA
CTTGGAAGCACTCATGATTCACGCGCATCATCTCCTCCACACATGCATAG
TCCTAGCTCTTCGGCAATCGCCCCTCGCGTCCCTACTAAGCCGGGACTTA
GCATGGTAGGGTTTGTACGGACCGGGCAAGCATAGACCAGGCCTGTCATG
CCACCGTGGTTTAGACATGCCAGATGAGAGGCCAGGTGCATCAGTAGCAC
CGGTACGGACTTCGACGCCCATGAGGACTGCTTACTCCAATTGACGGCAA
CTTTGCAATGAGATTCACTCTTCCCCATCACTTCCTGCAAGGGCAATCGT
GCGATGCCCCATGACATCTACTACCACGCATCAGAGTGAAAGGGCATGTA
GTACTCACGATACGTCAGTGGTACCCGCCGTGCTTCCCTGTGCTTTATTG
ACGCTGCTCGCAGGATGGGTGCGTGCGGCGCTACCTGCGGACGCGGAACT
GGGTGGCTTCTCGGGCAGCCTTGTCCATAGAAAAGGTGAGGCAGGGGCCA
GATGCAGCAACCTCATGGCTGTTGAAGTGGGCGAGGCCAAACTTCTCCGA
AACCGTCTTTATTTGTGTTGTGTGCACCAGCTGGCTCCACAGGTCGCGGT
TCTTATGTGGCCAGCTGACGGCGCCCACCGGGTTGCCCCAAAATGCCCCC
TACATATTTCGCGTGCTGCTTCCCAAGCACATCAACCTTTCCTTGCGTTC
TTTCGGCCACCATCCACGAAACCGCTGCAGACCATCAAGTGGCGCCTTGA
CCACGGGCTGGACCAGGGGCTGGGGTCGAATGCCTTCCTTGCGATCCCAG
CTGCACCCACGGGGGAGGGGGAGGGGATCGGAAAGGGAAAGGAGAGGGAG
AGCACACCTGGCATGGTGAGTTCTTGTGCCTATCAGGAGCAGCCAGCCAG
CCACCCCGGCACGTCTCGTTTGGGTTAGCTGCCGGGGTCTGCGCAGCCGC
CCCCCCCGTCTCTTGTGTGTAGGTATCCCCTGGCGCACTGATTTTATTGG
CGCTGTACTCGTATGTACTACGGTCTACACAGTGATGCATATACAGTAGT
ACTACTATGTACTCATAGTACATGAAGTACTTGTGAACAGTGTCCTGGGA
GACACAAGCGCCATTTTGTGTAGAGACAAGAGCTTTTGCTTCCAAGTACT
TGCATGTGCCACCCTGTCTGGCCCAGTCCAAACCCCGGCCCCCGTCACCG
AATTCCTCCGCGTCCCACGGGCTCCTGGCTGGCCTCAGCGGCTAAGCCCT
GGCCGTGACTTGCTCGGGCGGCCAGTGCTGGTGATGACTGTCAGGGGCAT
GGCGTGGGCGGACCCCGCTGGCTGGATGAAGGATCTCATCAACGCCCTTG
AGGTGCAGTGGGCATTTCACAGCGATTACCGGCTTGTCTTTCTTGTTTTG
TTTTAGGGGGGGATGGGGAGAAGATTGAGTTCACGTCCCAGCGACGAAAG
AGTGTGTGGTCAACGGTCCTTGCGCTACAGCAAGCAGCACACGAGCAACT
GAAGATTTCTATGTATAGTATATGCGAGCAACCGAGGTATACTTTCGATG
TATACCCCATGATTAGCCTGGCATCCCCAGTCTGCACGGCAATCACAATC
GGTCCCGTGTGCATTGCCTCCCACCCACCTCTACTGCCCGCGGCGGCGGC
GGCGGCGGCGGCAGCAAGCTTCCAGAAGCCTGTCCGCGACCAGCTCCGAC
TCGTGGCTGTGGCTGGTGGATCTCTCGGGCTGCAGCCTCCTCGACGTGCC
GCCGCCCTCGGCGCTGGAGCGATTGACGCAGACGCTGAGGGATCACTACC
CCGGGCGGCTTGAGCAAGCTGTTCTGATCGACCCCCCCGGTGAGCGCGGA
CCGCCAGCCAGCTGGTCAGTCACATCCGACGCTAACTGGACGGGGGTTTT
ACCTGTGATGGCTTGAGGGGCTTTCGTGGGGAGCCCTCGGCCCCCGTCCC
ACCCCCATGCAGACACTCATTCCGTGGCTGTTTTGGAGGAAGCCTGTTCT
TGCCTTGCGTTGCCGCTGTCTCCTGGCCCACGGGCTTTGTCGTCCTGATG
CTGTCTGCATGTGAGTTTACGCCTCCCCGTGTCTTGCCCATCTCCCTGAG
CAGGGTTCTTCTGGCTGGCCTACGCATTCGTCGAGAAGCTCTTGGATCCA
GGCACCCGCGCTAAGGTACGCCCGCGGACGACGTTCCGCGCAGGTAGCGA
CGCAGCAGTACTTCTATTCTACAGTAGTGCTGTACTCGAGCACCAGTAGC
AGTAGTACAGCACTTTGAATCACTTCCGGAAGGACTACAGTAGTGCCACA
GTATATACTTCGAAGTATACTACGTTGCATGTGCTCACGTTGTGCTTGCC
GTAGTCCTAAGACCATTGCTTCGAAGTAATACAGTACAGAAGCACTTTGA
AGCACATGTTCCTATGTATCCAGCTGCAGTGCAATACTTGCAAGCATCTG
AAGGAGCACAGGGCTCTCAACCCCTGGTCTGTTGGCCCAGGGACGGGACA
TTCTGGAAATAGCAACCTGATATACCGCCGTCTCGTCAGCCTGACCTTGC
TTGAACTGTACTGACCAGCCGCGGCGGGCGGGTGGGCGGGGACTCTGGCG
TGCTGCACTTAACAGGTTGTACTGGTGGACCGCAGTAAGGGTGACATGGG
TAGGTTCATCAGCGAGGACCAGCTGGAGGAGGCGTTTGGGGGACGCATCC
GAGTCAGCCTTGGGAAGCACCGGGGCAGCTGTACCTCTAGCAACTGTGGC
CCAGGCACCCTTGCGGAATCGGGCGTGGAGGGTGGCCCTGAGGGGGGCGA
AGCTGTCGGGGGGGGGGGCGAGGCTGAGCCAGGCATTGTGGCCAGCGGGG
CCCGGGTCAAGTCGGGTATACCACCACCACCCCCACCGCCGCCACCACCA
CTGAGAGGGGGGCGGACACTGGCGGCGCCGGCAGCGGCGACGACAACCGT
GACGACGGCGGCAGCAGCAGCGGCCCCGGCCCCGGCGCGCGGCAATGACT
GCCGTGTCAGCTGACCCATGCCACCGCCGCCACCTT
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Coding sequence (CDS) from alignment at S-ischiensis_contig119:53650..59135-

>mRNA_S-ischiensis_contig119.2502.1 ID=mRNA_S-ischiensis_contig119.2502.1|Name=mRNA_S-ischiensis_contig119.2502.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1632bp|location=Sequence derived from alignment at S-ischiensis_contig119:53650..59135- (Schizocladia ischiensis KU_0333)
ATGGCGCCCGCACGCCACCGCCTTGATGAGGACGAGTTTATGGACGAGCA
GGTGGCCAAAGTGCAGAGGATGGTCTTGGGCGAGCCTCCCGACCTCAACC
CGAGTTCTGCAGCCCGATGGAAGGCCTGCGCCACCGCTTACGCGAATATG
GCGCCCGCACGCCACCGCCTTGATGAGGACGAGTTTATGGACGAGCAGGT
GGCCAAAGTGCAGAGGATGGTCTTGGGCGAGCCTCCCGACCTCAACCCGA
GTTCTGCAGCCCGATGGAAGGCCTGCGCCACCGCTTACGCGAATGATGGG
TGCGTGCGGCGCTACCTGCGGACGCGGAACTGGGTGGCTTCTCGGGCAGC
CTTGTCCATAGAAAAGGATGGGTGCGTGCGGCGCTACCTGCGGACGCGGA
ACTGGGTGGCTTCTCGGGCAGCCTTGTCCATAGAAAAGACCATCAAGTGG
CGCCTTGACCACGGGCTGGACCAGGGGCTGGGGTCGAATGCCTTCCTTGC
GATCCCAGCTGCACCCACGGGGGAGGGGGAGGGGATCGGAAAGGGAAAGG
AGAGGGAGAGCACACCTGGCATGACCATCAAGTGGCGCCTTGACCACGGG
CTGGACCAGGGGCTGGGGTCGAATGCCTTCCTTGCGATCCCAGCTGCACC
CACGGGGGAGGGGGAGGGGATCGGAAAGGGAAAGGAGAGGGAGAGCACAC
CTGGCATGCGGCTAAGCCCTGGCCGTGACTTGCTCGGGCGGCCAGTGCTG
GTGATGACTGTCAGGGGCATGGCGTGGGCGGACCCCGCTGGCTGGATGAA
GGATCTCATCAACGCCCTTGAGCGGCTAAGCCCTGGCCGTGACTTGCTCG
GGCGGCCAGTGCTGGTGATGACTGTCAGGGGCATGGCGTGGGCGGACCCC
GCTGGCTGGATGAAGGATCTCATCAACGCCCTTGAGCAAGCTTCCAGAAG
CCTGTCCGCGACCAGCTCCGACTCGTGGCTGTGGCTGGTGGATCTCTCGG
GCTGCAGCCTCCTCGACGTGCCGCCGCCCTCGGCGCTGGAGCGATTGACG
CAGACGCTGAGGGATCACTACCCCGGGCGGCTTGAGCAAGCTGTTCTGAT
CGACCCCCCCGCAAGCTTCCAGAAGCCTGTCCGCGACCAGCTCCGACTCG
TGGCTGTGGCTGGTGGATCTCTCGGGCTGCAGCCTCCTCGACGTGCCGCC
GCCCTCGGCGCTGGAGCGATTGACGCAGACGCTGAGGGATCACTACCCCG
GGCGGCTTGAGCAAGCTGTTCTGATCGACCCCCCCGGGTTCTTCTGGCTG
GCCTACGCATTCGTCGAGAAGCTCTTGGATCCAGGCACCCGCGCTAAGGG
TTCTTCTGGCTGGCCTACGCATTCGTCGAGAAGCTCTTGGATCCAGGCAC
CCGCGCTAAGGTTGTACTGGTGGACCGCAGTAAGGGTGACATGGGTAGGT
TCATCAGCGAGGACCAGCTGGAGGAGGCGTTTGGGGGACGCATCCGAGTC
GTTGTACTGGTGGACCGCAGTAAGGGTGACATGGGTAGGTTCATCAGCGA
GGACCAGCTGGAGGAGGCGTTTGGGGGACGCATCCGAGTCGGCCCCGGCG
CGCGGCAATGAGGCCCCGGCGCGCGGCAATGA
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