mRNA_S-ischiensis_contig115.2463.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig115.2463.1
Unique NamemRNA_S-ischiensis_contig115.2463.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: D8LQ21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ21_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 7.010e-83
Identity = 140/215 (65.12%), Postives = 168/215 (78.14%), Query Frame = 1 
Query:  592 EAFGSKQYTQRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDLVSRLDAIDLSPGMLNQARKKGAALAMDGILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKPGGKVLLLENSKSEFAPLAAYQDATAEAAARAG--KGCYWNQDVVMLAQQAGLKVLRTQ-SVAGGLFRSLECAP 1227
            +   SK  T+ SYD  AE YD+LDGGWAA+A+G+E LRS LLAGA GRVLEVGVGTGLNL  YRRDLVS ++A+DLSPGML+QA  +  +L M+ ++ L  MD E L FP + FDTVVDTFSLCVF+DP A+LREMARVCKP G+VLLLENSKS+F PLAAYQD TA      G  KGC+WNQDV  L + AGL+V+R+  ++AGGLFR+LECAP
Sbjct:   28 DQLSSKALTKESYDGFAEGYDNLDGGWAASAIGLEELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSGIEAVDLSPGMLSQASSRSESLGMERLVKLSVMDAEHLGFPSEAFDTVVDTFSLCVFSDPSAALREMARVCKPAGRVLLLENSKSDFGPLAAYQDLTASFLVNKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGLFRTLECAP 242
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: A0A6H5K3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H3_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 3.380e-82
Identity = 172/354 (48.59%), Postives = 218/354 (61.58%), Query Frame = 1 
Query:  232 NVTQALLPLVPLLVEVPSLAHHAKLAWPVVRGRLPLPLAFVGCPQLKSNTGHKKTILKLSSAG--------AERHGTTSVPENWESPVPRREV------LRSWGATTCTILGVALGHPDLSCATP---ANGDM--PGSPEAFGSKQYTQRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDLVSRLDAIDLSPGMLNQARKKGAALAMDGILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKPGGKVLLLENSKSEFAPLAAYQDATAEAAARAG--KGCYWNQDVVMLAQQAGLKVLRTQ-SVAGGLFRSLECAP 1227
            NVT+ LLPL P +VEVP+LA HA+ A P  R  +   +A        S     +  + LS  G        +  +  +++  N  SP   R+V      L   GA   T++  A      +  +    A+ D+   G  +   SK  T+ SYD  AE YDDLDGGWAA+A+G+E       A A GRVLEVGVGTGLNL  YRRDLVS ++A+DLSPGML+QA  +  +L M  +++L  MDVE L FP + FDTVVDTFSLCVF+DP A+LREMARVCKP G+VLLLENSKS F PLAAYQD TA      G  KGC+WNQDV  L + AGL+V+R+  ++AGGLFR+LEC P
Sbjct:  138 NVTRNLLPLAPFVVEVPALAAHARAARPWARSAMTAAVAAAF-----SRRPFARGFICLSGGGXXXXXXXGSSTNDRSALDPNSRSPSCCRDVDVATPSLTRRGAIEETLVSAARWWAVAAAGSSGAFADADVGATGVGDQLSSKALTKESYDGFAEGYDDLDGGWAASAIGLE-------ASATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQASSRSESLGMKRLVNLSVMDVEHLGFPSEAFDTVVDTFSLCVFSDPSAALREMARVCKPAGRVLLLENSKSNFGPLAAYQDFTASFLVNKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGLFRTLECVP 479
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BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: A0A836CG23_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG23_9STRA)

HSP 1 Score: 236 bits (601), Expect = 4.800e-71
Identity = 124/210 (59.05%), Postives = 146/210 (69.52%), Query Frame = 1 
Query:  598 FGSKQYTQRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDLVSRLDAIDLSPGMLNQARKKGAALAMDGILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKPGGKVLLLENSKSEFAPLAAYQDATAEAAARAGKGCYWNQDVVMLAQQAGLKVLRTQSVAGGLFRSLECAP 1227
            +  K + ++SYD  A SYD LDG   A  LGI+ LR  + + A GRVLEV VGTGLNLP YRRD VS++DA+DLSP ML QA ++G    +  I +  EMDVE L F D TFDTVVDTF LCVF DPVA+LREM RVC   G+VLLLENSKSE   L AYQD TA A +R  KGC WNQDV  LA+ AGL V+ +   A GLFR++EC P
Sbjct:   16 YSDKAFAKQSYDTFASSYDGLDGSIMAQGLGIDQLRQIMTSTARGRVLEVAVGTGLNLPYYRRDRVSQIDAVDLSPSMLAQAEQRGVEAGLQDIAAYHEMDVEQLKFRDGTFDTVVDTFGLCVFGDPVAALREMGRVCATNGRVLLLENSKSEVPLLGAYQDLTAGALSRISKGCVWNQDVEALARSAGLTVVHSYKCAAGLFRAVECTP 225
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: A0A061R1H8_9CHLO (Methyltransferase type 11 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R1H8_9CHLO)

HSP 1 Score: 202 bits (514), Expect = 2.120e-57
Identity = 107/203 (52.71%), Postives = 140/203 (68.97%), Query Frame = 1 
Query:  619 QRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDLVSRLDAIDLSPGMLNQARKKGAALAMDGILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKPGGKVLLLENSKSEFAPLAAYQDATAEAAARAGKGCYWNQDVVMLAQQAGLKVLRTQSVAGGLFRSLECAP 1227
            Q +YDR A  YD+LD G AA  L +  LR +LL  A G VLEVGVGTG+NLP Y +  VS +  +DLS GML++A ++   +  DG+++L++ DVE+L F D +FD VVDTFSLCV+ DP+ +LREMARV +PGG VLLL +++S F PLA YQDATA+   R G+GC WNQDV  LA  AGL+V+  +   GGL   +   P
Sbjct:   83 QAAYDRYASEYDELDDGMAADFLRLPELRRSLLRRASGNVLEVGVGTGINLPLYDKRKVSSVTGVDLSVGMLHEAEQRVRRIGSDGLVTLQQADVESLPFADSSFDAVVDTFSLCVYPDPLQALREMARVLRPGGSVLLLAHTRSTFTPLAVYQDATAQVVRRMGRGCEWNQDVGGLAASAGLEVVEQERHLGGLISLVVAHP 285
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: A0A8J9WTP0_9CHLO (Probable ubiquinone/menaquinone biosynthesis C-methyltransferase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WTP0_9CHLO)

HSP 1 Score: 193 bits (491), Expect = 8.410e-55
Identity = 108/204 (52.94%), Postives = 133/204 (65.20%), Query Frame = 1 
Query:  619 QRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDLVSRLDAIDLSPGMLNQARKKGAALAMDGILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKPGGKVLLLENSKSEFAPLAAYQDATAEAAARAGKGCYWNQDVVMLAQQAGLKVLRTQSVAGGLFRSLECAPV 1230
            + +YD+ A SYD LD   A  ALG   LR  L+A AHG+VLE+ VGTGLNLP Y  D +  L A+D+S GML QAR +   L+    ++  + DV AL F    FD V+DTFSLCVF DP A++RE ARV +PGG +LLLE+ +S FAPLA YQD TA+A A  GKGC+WNQDV  L   AGL+V R +   GGL   LE   V
Sbjct:   24 EEAYDQYAGSYDVLDSSAATDALGFPELRRELIAEAHGKVLELAVGTGLNLPLYHPDQLESLSALDISAGMLQQARMRAQGLSSQLPVTFLQGDVAALPFEAAYFDCVLDTFSLCVFPDPAAAVREAARVLRPGGTLLLLEHQRSPFAPLAWYQDLTADAVAAMGKGCFWNQDVAGLLNAAGLRVQRKKESIGGLIVLLEAERV 227
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: A0A836BNX8_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BNX8_9CHLO)

HSP 1 Score: 192 bits (488), Expect = 1.040e-53
Identity = 117/215 (54.42%), Postives = 143/215 (66.51%), Query Frame = 1 
Query:  619 QRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDL-------------------VSRLDAIDLSPGMLNQARKKG-AALAMDG-ILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKPGGKVLLLENSKSEFAPLAAYQDATAEAAARAGKGCYWNQDVVMLAQQAGLKVLRTQSVAGG 1200
            Q++YDR A SYD+LDGG AA ALG   LR  LLA A GRVLEV VGTGLNLP Y  D                    VS ++A+DLSPGML+QAR++  A+ A+ G  +S R+ DV AL + D +FD+VVDTFSLCVF DP  +L+EMARV +P G+VLLLE+++S+   LAAYQDATA   A  GKGC WNQDV  LA  AGL+V   +  A G
Sbjct:   54 QQAYDRYAGSYDELDGGVAAEALGFPQLRQQLLAQARGRVLEVAVGTGLNLPYYSWDERSGAASGDEAAAAVAESRGVSSVEAVDLSPGMLDQARRRTQASPALSGRSISFRQADVTALPYGDDSFDSVVDTFSLCVFPDPGTALKEMARVVRPSGRVLLLEHTRSDNPLLAAYQDATAGPVAALGKGCVWNQDVEGLAAAAGLRVEAAERSAAG 268
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: I0YQ96_COCSC (UbiE/COQ5 methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YQ96_COCSC)

HSP 1 Score: 186 bits (473), Expect = 2.160e-52
Identity = 105/188 (55.85%), Postives = 124/188 (65.96%), Query Frame = 1 
Query:  640 AESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDLVSRLDAIDLSPGMLNQARKKGAALAMDGILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKPGGKVLLLENSKSEFAPLAAYQDATAEAAARAGKGCYWNQDVVMLAQQAGLKVLRTQSVAGGL 1203
            A SYD LD G AA ALG   LR  L+  AHG VLE+ VGTGLNLP Y    V  L A+DLS GML QARK+   L     ++  + DV AL F   TFD V+DTFSLCVF D  A+LRE ARV KPGG++LLLE+ +S  APLA YQD TA+A A  GKGC+WNQDV  L   AGL+++  +   GGL
Sbjct:   14 AASYDALDSGAAAEALGFPELRRELIEQAHGSVLELAVGTGLNLPVYNPSHVKALTALDLSAGMLQQARKRVKGLGDPLPVTFVQGDVAALPFESATFDCVIDTFSLCVFPDAAAALREAARVVKPGGQLLLLEHQRSPIAPLAWYQDVTADAVAAMGKGCFWNQDVAGLLSAAGLRIVTKKESLGGL 201
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: A0A150G4S0_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G4S0_GONPE)

HSP 1 Score: 187 bits (474), Expect = 3.030e-52
Identity = 118/230 (51.30%), Postives = 147/230 (63.91%), Query Frame = 1 
Query:  619 QRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCY-----RRDL------------------VSRLDAIDLSPGMLNQARKK-GAALAMDGI-LSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKP---GGKVLLLENSKSEFAPLAAYQDATAEAAARAGKGCYWNQDVVMLAQQAGLKVLRTQSVAGGLFRSLECA 1224
            Q++YD+ + +YD+LDGG AA ALG   LR  LL  A G VLEV VGTGLNLP Y     R++                   V+ L+ +DLSPGML QAR++  AA A+    +S  + DV AL FPD +FD+VVDTFSLCVF DP A+L EMARV  P   GG+VLLLE+++S+   LAAYQDATA   A  GKGC WNQDV  +A +AGL+VLR++  AGG    L  A
Sbjct:    2 QQAYDKYSGTYDELDGGAAAEALGFPQLRQELLREARGHVLEVAVGTGLNLPYYSWGPQRQEPPGQGQQKGPGQEAPAPSGVTALETVDLSPGMLAQARRRVAAAEALSSRPISFTQADVAALPFPDSSFDSVVDTFSLCVFPDPQAALNEMARVVSPRSSGGRVLLLEHARSDNPLLAAYQDATAGPVAALGKGCVWNQDVEGMAARAGLEVLRSERAAGGTVELLVAA 231
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: K8YNM9_NANGC (Rrna (Guanine-n-)-methyltransferase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNM9_NANGC)

HSP 1 Score: 202 bits (513), Expect = 3.150e-52
Identity = 129/260 (49.62%), Postives = 161/260 (61.92%), Query Frame = 1 
Query:  475 RREVLRSWGATTCTI-LGVALGHPDLSCATPANG--DMPGSPEAFGSKQYTQRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDLVSR----LDAIDLSPGMLNQARKKGAALAMD-GILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKP-GGKVLLLENSKSEFAPLAAYQDATAEAAAR-AGKGCYWNQDVVMLAQQAGLKVLRTQSVAGGLFRSLECA 1224
            R + L   G++  T+ +G+ LG    S    A    D+P S  +  + Q  + +YD  A SYD LDGG AA  LG++  R  L+  A G VLE GVGTGLNLP Y     S     LDAIDLSPGML +AR K A L +    +  REMDV  + F D++FD V DTFSLCV+ DP  +L+EMARVCK   G+VLLLENS+S   P+AAYQD TA   AR  GKGC +NQDV  LA+QAGL+V+  + + GGL   LECA
Sbjct:  515 RAQALSGAGSSLTTLAVGLLLGCQRSSSPALARNVFDVPSS--SVTASQSLKGAYDEYASSYDGLDGGDAARFLGLDAARKELIGRARGHVLECGVGTGLNLPFYEFGSGSAPTVSLDAIDLSPGMLREARSKAAFLNLGPDAVRFREMDVAKMDFADESFDCVCDTFSLCVYLDPAQALKEMARVCKAESGRVLLLENSRSNLLPVAAYQDVTAGIVARYGGKGCVYNQDVASLARQAGLRVMSQKPLLGGLMTMLECA 772
[Close]
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Match: A0A4D9D970_9STRA (THUMP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D970_9STRA)

HSP 1 Score: 198 bits (504), Expect = 8.000e-52
Identity = 125/258 (48.45%), Postives = 158/258 (61.24%), Query Frame = 1 
Query:  475 RREVLRSWGATTCTILGVALGHPDLSCATPANGDMPGSPEA-FGSKQYTQRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGAHGRVLEVGVGTGLNLPCYRRDLVSR----LDAIDLSPGMLNQARKKGAALAMD-GILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKP-GGKVLLLENSKSEFAPLAAYQDATAEAAAR-AGKGCYWNQDVVMLAQQAGLKVLRTQSVAGGLFRSLECA 1224
            R + L   G++  T+ G  L     S +    G++   P A   + Q  + +YD  A SYD LDGG AA  LG++  R  L+  A G +LE GVGTGLNLP Y     S     LDAIDLSPGML +AR K A L +    +   EMDV  ++F D++FD V DTFSLCV+ DP  +L+EMARVCK   G+VLLLENS+S   P+AAYQD TA   AR  GKGC +NQDV  LA+QAGL+V+  + + GGL   LECA
Sbjct:  497 RAQALSGAGSSLATLAGGLLLGCQRSSSPALAGNIFDIPSASVTASQSLKGAYDEYASSYDGLDGGDAARFLGLDAARKDLIGLARGHILECGVGTGLNLPFYEFGSGSAPAVSLDAIDLSPGMLREARSKAAFLNLGPDAVRFHEMDVAKMNFADESFDCVCDTFSLCVYLDPAKALKEMARVCKAVSGRVLLLENSRSNLLPVAAYQDVTAGFVARYGGKGCVYNQDVASLARQAGLRVMSQKPLLGGLITMLECA 754
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig115.2463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ21_ECTSI7.010e-8365.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3H3_9PHAE3.380e-8248.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CG23_9STRA4.800e-7159.05S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A061R1H8_9CHLO2.120e-5752.71Methyltransferase type 11 n=1 Tax=Tetraselmis sp. ... [more]
A0A8J9WTP0_9CHLO8.410e-5552.94Probable ubiquinone/menaquinone biosynthesis C-met... [more]
A0A836BNX8_9CHLO1.040e-5354.42Methyltransf_11 domain-containing protein n=1 Tax=... [more]
I0YQ96_COCSC2.160e-5255.85UbiE/COQ5 methyltransferase n=1 Tax=Coccomyxa sube... [more]
A0A150G4S0_GONPE3.030e-5251.30Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
K8YNM9_NANGC3.150e-5249.62Rrna (Guanine-n-)-methyltransferase n=1 Tax=Nannoc... [more]
A0A4D9D970_9STRA8.000e-5248.45THUMP domain-containing protein n=2 Tax=Monodopsid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig115contigS-ischiensis_contig115:30932..36501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.6
Seed ortholog evalue5.6e-70
Seed eggNOG ortholog2880.D8LQ21
KEGG koko:K17803
EggNOG free text desc.methyltransferase activity
EggNOG OGsCOG0500@1,KOG4300@2759
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-15_001250.1
Exons5
Model size1610
Cds size1110
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815627.0704098-UTR-S-ischiensis_contig115:30931..313051622815627.0704098-UTR-S-ischiensis_contig115:30931..31305Schizocladia ischiensis KU_0333UTRS-ischiensis_contig115 30932..31305 -
1695739813.0910509-UTR-S-ischiensis_contig115:30931..313051695739813.0910509-UTR-S-ischiensis_contig115:30931..31305Schizocladia ischiensis KU_0333UTRS-ischiensis_contig115 30932..31305 -
1622815627.1521611-UTR-S-ischiensis_contig115:36375..365011622815627.1521611-UTR-S-ischiensis_contig115:36375..36501Schizocladia ischiensis KU_0333UTRS-ischiensis_contig115 36376..36501 -
1695739813.170601-UTR-S-ischiensis_contig115:36375..365011695739813.170601-UTR-S-ischiensis_contig115:36375..36501Schizocladia ischiensis KU_0333UTRS-ischiensis_contig115 36376..36501 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815627.0844696-CDS-S-ischiensis_contig115:31305..314951622815627.0844696-CDS-S-ischiensis_contig115:31305..31495Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 31306..31495 -
1695739813.1017435-CDS-S-ischiensis_contig115:31305..314951695739813.1017435-CDS-S-ischiensis_contig115:31305..31495Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 31306..31495 -
1622815627.0973303-CDS-S-ischiensis_contig115:32456..325241622815627.0973303-CDS-S-ischiensis_contig115:32456..32524Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 32457..32524 -
1695739813.128639-CDS-S-ischiensis_contig115:32456..325241695739813.128639-CDS-S-ischiensis_contig115:32456..32524Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 32457..32524 -
1622815627.109803-CDS-S-ischiensis_contig115:33364..335021622815627.109803-CDS-S-ischiensis_contig115:33364..33502Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 33365..33502 -
1695739813.1383407-CDS-S-ischiensis_contig115:33364..335021695739813.1383407-CDS-S-ischiensis_contig115:33364..33502Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 33365..33502 -
1622815627.120903-CDS-S-ischiensis_contig115:34569..347131622815627.120903-CDS-S-ischiensis_contig115:34569..34713Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 34570..34713 -
1695739813.14683-CDS-S-ischiensis_contig115:34569..347131695739813.14683-CDS-S-ischiensis_contig115:34569..34713Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 34570..34713 -
1622815627.1385386-CDS-S-ischiensis_contig115:35805..363751622815627.1385386-CDS-S-ischiensis_contig115:35805..36375Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 35806..36375 -
1695739813.1552143-CDS-S-ischiensis_contig115:35805..363751695739813.1552143-CDS-S-ischiensis_contig115:35805..36375Schizocladia ischiensis KU_0333CDSS-ischiensis_contig115 35806..36375 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig115.2463.1prot_S-ischiensis_contig115.2463.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig115 31306..36375 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig115.2463.1

>prot_S-ischiensis_contig115.2463.1 ID=prot_S-ischiensis_contig115.2463.1|Name=mRNA_S-ischiensis_contig115.2463.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=370bp
MVDARQCKRQRWLAEPVPLTSTFQGARESLAGIVKNVTQALLPLVPLLVE
VPSLAHHAKLAWPVVRGRLPLPLAFVGCPQLKSNTGHKKTILKLSSAGAE
RHGTTSVPENWESPVPRREVLRSWGATTCTILGVALGHPDLSCATPANGD
MPGSPEAFGSKQYTQRSYDRAAESYDDLDGGWAAAALGIEGLRSALLAGA
HGRVLEVGVGTGLNLPCYRRDLVSRLDAIDLSPGMLNQARKKGAALAMDG
ILSLREMDVEALSFPDKTFDTVVDTFSLCVFNDPVASLREMARVCKPGGK
VLLLENSKSEFAPLAAYQDATAEAAARAGKGCYWNQDVVMLAQQAGLKVL
RTQSVAGGLFRSLECAPVL*
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mRNA from alignment at S-ischiensis_contig115:30932..36501-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig115.2463.1 ID=mRNA_S-ischiensis_contig115.2463.1|Name=mRNA_S-ischiensis_contig115.2463.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5570bp|location=Sequence derived from alignment at S-ischiensis_contig115:30932..36501- (Schizocladia ischiensis KU_0333)
CGCCGCGCACACTTGGCTGGAGCACCACGGGCGCCGTGTCAGCAGGTGCG
CCGCACACGCAGACAGCTGTAGCGGTGATCCACTGCCGGGGCAGGCAGGG
GGGGGAGCAGGCCGGGTCAGCTCAAAATGGTTGACGCGCGGCAGTGCAAG
CGCCAGCGCTGGCTCGCAGAGCCAGTCCCTCTGACCTCGACGTTTCAGGG
TGCCCGCGAAAGCCTCGCAGGGATAGTAAAGAACGTGACCCAGGCGTTGC
TTCCTCTCGTGCCCCTGCTAGTCGAGGTTCCATCGCTGGCGCACCACGCA
AAGCTGGCTTGGCCAGTGGTACGCGGACGACTCCCTCTTCCTCTCGCTTT
CGTGGGCTGTCCCCAACTCAAGTCGAACACGGGACACAAGAAGACGATAC
TGAAGTTGTCTAGTGCCGGTGCCGAGCGACACGGGACAACCTCCGTGCCG
GAAAACTGGGAAAGCCCCGTGCCAAGGCGGGAAGTCTTGCGGTCTTGGGG
GGCCACTACTTGTACAATCCTGGGCGTAGCGCTGGGCCACCCTGACCTGT
CATGTGCAACGCCAGCAAATGGAGACATGCCTGGGTCACCAGAGGCGTTT
GGGAGCAAGCAGTACACCCAGCGTTCCTATGACAGGGCCGCGGAGTCCTA
CGACGACCTGGACGGGGGCTGGGCGGCGGCAGCGCTGGGCATTGAGGTGT
GTTCAAGTACGCGGTATTGAGGTGTGTTCAAGTATCGAGCCAGGCCCGGG
CCTACCATTCTGTGTGTCCCTTTCCAGTCCGCGGTGTGGATGCTGTTTTG
AGGAACTGCTGCAGAATGACCAAACAAACCCAAACCATCTATCACCGGTA
TTCCCCCCTTGCCGTGTTGTGCCGAGGTGATTGACCTACAAGTACTGCAA
GTACATTGGAGGTACTTACAATCCCCCTATGTGAAATTGAGTGTCCACAG
TGCAATTGGCAGGGTATAGGTCTTCTGTCCTTCGGCCAGCCTCTCTCCTG
ATGAGCACCCGTTCCGGGGACCCATACCAATAAGTGCTTCCAAAGTGAGC
TACATACATTACATACACCGTGTACTGTACTTGGCGTCTGCTGCAACTAC
CCGAGGAACAGGGATTATTTGCCCTGTTTGCGGCAGAAGTATTTATGAAG
TTTCTTGGTTTATCGATGTGTATTGTACAGTATGTGTGGAATGCTGTGGC
AGTAGCATGTGCAATGTACGTGATGTATGTACTCGAGCATGCCTGCTGAC
TGCACTGCTGCTCCCTCGCGCATACTACTATACGAGAATACTTCCAAGTA
TGAGTACAGTAGGAGGTACCATATATATATATATATATGTACTCACATGG
TGCTTGCCGTAGTCCCCAGACCGTTGACCACGCGCCTAGGTCGAGACGGA
GCAGGATACCATACCGTCATAATCCCTCAAGGGTACAGGTGGGCGCCCGA
CTGTGAGCCACGCAAACCCGAAGCCCAGAACTAACGTTGCGAGTACACCC
CAACCAACTGTAGTGCCTGATGGCCCTGAGTCCCATGATCGAACTAATGT
ACTCAACTACAGTGCTGAGTTCACTAAGGCAGGCCGAATATTTGTACAGA
CTACTTGGTGCAAGTGTTTTCGTCTCTCATGATACGCTGACACCAACACC
TGGTCAATTAGAATATGCCATTTTACACACTAGTGGACTATTGTCAACCA
AGTTCCGCAAGTAGGTGCGGCAGTCAATTTTTTTCAGTGCTAGTGTCTTA
TTGACATCTGCATGTTTGCCATTTCGGGCGTCTTCCAGGGCCTGCGCTCT
GCCCTGCTGGCCGGCGCCCACGGACGCGTGCTGGAGGTGGGTGTGGGTAC
GGGCCTGAACCTCCCATGCTACCGCCGGGACTTGGTGTCCAGGCTGGACG
CTATCGACCTCAGCCCCGGGATGCTGAACCAGGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGCGTGTGCGTGTTTCGATATGATGATATGTGACG
TGATATAGGCGCAAAAGCACTAGTTTGACATCACATCACATCACAACAAA
AAAATCGGCGTGTGTCGCGTACTTTTTAAGCATGTGTGTGTGGGGGGTAC
GTGGTAGTTCAGGGTTTAGTTTACCATGCACCCCGCATGATTGTGGCCCC
ATTCGTGTACTACTTTGTACTTCGACATAATATATTGTAGTACTTGGAGG
TATATTGTACGGAACACGGTTTCTTCATTTGTTGGGGAGGGTGTGCAGGC
TACAGCCAGTCTTTCCATTCTTTGTCATAGCAACAGGTAGTGCAGAGTGT
CCTTCAATATGTACTTCGTTGTGCCTAGCCGGACGATGCAAAAATGGTTC
CAACATACTGCAGTATGTACTACAGTTGTACTGGTAGGGTACTCTACTAA
GTAGCAGTAGACACTGCAACACGGGCGCTGTGATAGGTATGGTATATCGC
ATGCATGACAAGGTGTTAGTGCAACACTCTCTCCTCGTGTTTGTTTGTCT
ACCAGCTCAAGTAGCGTGCTGCTGTCGTCAGCCAGTACAGTACCAGTACA
TAAGTACTTCAAAGTACCTCAAAGTACTATACTGGGAGGTGGAAATAGCC
CTATTCCTTGCACCTTGAAGCCATTCCTACTACTGCAGGAGCTACTCCCA
AGCAGTTGGAGATGCGCGTGCACATTGAGAACACGCCTGGGCTATTGAGC
TTCCTACTTCCTACTTGGAAGACTTGATACAGTTGCAGGTGATAAGTTGT
AGACACTAGAGTACTCAGTACGAGTACATAGAAACATATACTACAGGTAA
TTTAGACCTGTCTGCCGTACTGTGGGTACAGTATGCAGTGTACTTGGAAA
TGACATTTCTGCAATTGTGCCTGTCATAGCTGAGAGACCGCTGATCCCCT
GACCTCTTGAAGCAACCCAGTCCTGCTGCAATGTAATACTTGGAGGTACG
TGGATGTATCTACGACTGTAACAGCTGGCCGCGCATGACGCTTGCACAGG
CGAGGAAGAAAGGCGCGGCCCTGGCCATGGATGGCATTCTGTCACTGCGC
GAGATGGATGTGGAGGCATTGTCCTTCCCCGACAAGACCTTTGACACCGT
GGTGGACACATTCTCACTCTGTGTGTTCAACGACCCGGTAAGAGGTACAT
AGTTGGCGTTGTCATACAGTACAGTACAGTTCTCACTACTTGCGTAGAGT
ACTCGGGTCCTTGAGTAGAGTACACGACAAGACCTTTGACACTGTGGTGG
ACACCACATTCTCACTCTGTGTATTCATAGGCCCCGTAAGAGGTACTTCG
AAGTACATTGTTGGCATTATCATACAGTACAGTACAGTACTCACTGCCTG
AGTAGAGTACACGACAAGACCTTTGGCACCGTGGTGGACAAATTCTCACT
CTGTATATTCACAGACCCGGTAAGAGGTAGTTGTGGTGGACACTCTCTCG
CTCTGTGTATTCACAGAACCGATAAGACGTACTTGGCATTATCGTGCACT
GCTTGGAAAGTACAGTACAGTACAGTACAGTACTCACTGCTTGAGTGGAG
TACTTGAGTACTTCCCACAAGTAGAGTACTCGTACAGTAGGTACATACTC
AAGTATTGAGGCTGCGCGATGTACTACTATCCATGCAGGATACAACACTT
TGTGCCTCATGTACAGCAGAGTAGAGTATTTCCAACAGCAATTTGATGTA
CCCAGTAGAGTACCTCGGAAGTACAGTAGCGAAGTACGTGGACACGAGAC
ACAACATAACACATTCACTCTGTCATTGAGAAACCTCTTGGCTTGGTTCA
TTCACTCTGTCAAAAACAACGCGCTTCCGGGTGTGGGAACGCGATAAGCA
CCAAAGCCACCCTGGAAATACCCTGGGGGGTAGGTGCCAGAAAAAGCAGC
CGCAGGTTCTACCGTACACGTAGCTAGCCTGCAGTAGCCCTAACCCTAAC
CCTAACCCTAACCCGTATGGAGCCCAGGTGGCCTCTCTGAGGGAGATGGC
TCGGGTGTGCAAGCCAGGCGGCAAAGTACTGCTGCTGGAGAATAGGTGAG
AGGGGTGAGGGATGTTGACACCACAAGATGCCATGCACTGGTCGCTTCTT
CTTTGTACTGTAATGCGGCTCTACTGTACTACTTCAAGTATACTGAACGT
CTCGCCTATTGGCCCTTGCGGCATGGCGGACCTCGGAGTGCACTACTGTC
TCGAGTACAAGTTCCTTGGAAGGACCTAGTACTGTACTTGTTAGTACCTT
GTCCTATACGAAGTACTATGCTGCACTATACTCGTGCTGTAATGGTACAC
TGTAGAGAGGACTCTTGGTGCTACGTACGAAGTACCATCGTCCGGTGAGA
CAATGGTATCTGCAAGTACTTGAGCTCCTTGTGTACATGATATACAGTAC
ATACGTACTGTATATCACGGTCGAAGAGTTGCAGCAGGGCTGTGGGCAGT
GGGCGGGGGCTGTACAATACATCCTCCTGGCATGCTGCGCAAGGCTAACT
CTTTGAGTCTTGCCTGTATGGTGATGCTGCACTTCCTACAAATCGTGTTT
GGTTCCAACTACTGTACTCCTCAAGCACATTGGGCTGTTCTCGCTTGCCG
GACAGCTTCTGAACCAATTTCTGAGCTCCGTAGTTGTCTGTGAAGCACTG
GTCAATTGCTCTATTTCCTGCTTTTGGGCCCAATAAAATACTTCCAACTG
CAACACTTCCTCTACCTTGGTGTTCCTTGCTCTTTGGGAGGATATGGCCA
TGTCTTCTCGCGCATGGATTGACTAGGTGCTCTACAATGCACTGCAGCAC
TGCACTTCCAATTTGTGCCGCTGGCGTTTCATGCCTTACAAGTACTCGAG
CAGTCGTACTGTAATATCTGGATACCCCACCTCGCCCAGTCACCCCTGCC
TTAAAGGCATCGTCACGTTCCCCTTCCCCCTCCCCCGGGCCTTGTTGCGT
TCCCTGCTCCCCCCTCGCCATTCCTGCCCAAAAACCGCAAATGCCGTGGC
CCCCAGCAAGAGTGAATTTGCTCCCCTGGCTGCCTACCAGGATGCCACCG
CGGAAGCCGCCGCCCGTGCGGGGAAGGGCTGCTACTGGAACCAGGATGTG
GTGATGCTGGCGCAACAGGCTGGCCTTAAAGTGTTGAGGACGCAGAGCGT
GGCTGGGGGGCTGTTCCGCTCTCTCGAGTGTGCCCCAGTACTCTAGACAC
GCAGGGTTTACCTAGTGCTAAGACAACTCAGGGTAACTGCTTACATCTCA
CTTGGCATACCAGAGCAGCTTGTACGAGTGCAGTGCAGTACAGTAGTGCT
CATAGGAAAAGGGAAGGCGTTTCTTTGGACCGGCTCTCCACGGCTCTCCC
GTGGGCTCGTGCCCCCTTCGCACACGACCGCGTGACCGCATGGCGTAGCC
ACGGGTGTTGGGTATGCGTCCTCCTGGTGGTGGCGACACCATTGTGACGT
TTGCTTTGTGCTATTGGGTTTGCTCTCGTGGTGTGGTCACGAGGTTCGTG
CGCGGTACATATTGCGGCACTTGCTCACGCCTTCTCTTCTCGCACTCGCC
CAGGTACGTCGTGATTTCGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig115:30932..36501-

>mRNA_S-ischiensis_contig115.2463.1 ID=mRNA_S-ischiensis_contig115.2463.1|Name=mRNA_S-ischiensis_contig115.2463.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2220bp|location=Sequence derived from alignment at S-ischiensis_contig115:30932..36501- (Schizocladia ischiensis KU_0333)
ATGGTTGACGCGCGGCAGTGCAAGCGCCAGCGCTGGCTCGCAGAGCCAGT
CCCTCTGACCTCGACGTTTCAGGGTGCCCGCGAAAGCCTCGCAGGGATAG
TAAAGAACGTGACCCAGGCGTTGCTTCCTCTCGTGCCCCTGCTAGTCGAG
GTTCCATCGCTGGCGCACCACGCAAAGCTGGCTTGGCCAGTGGTACGCGG
ACGACTCCCTCTTCCTCTCGCTTTCGTGGGCTGTCCCCAACTCAAGTCGA
ACACGGGACACAAGAAGACGATACTGAAGTTGTCTAGTGCCGGTGCCGAG
CGACACGGGACAACCTCCGTGCCGGAAAACTGGGAAAGCCCCGTGCCAAG
GCGGGAAGTCTTGCGGTCTTGGGGGGCCACTACTTGTACAATCCTGGGCG
TAGCGCTGGGCCACCCTGACCTGTCATGTGCAACGCCAGCAAATGGAGAC
ATGCCTGGGTCACCAGAGGCGTTTGGGAGCAAGCAGTACACCCAGCGTTC
CTATGACAGGGCCGCGGAGTCCTACGACGACCTGGACGGGGGCTGGGCGG
CGGCAGCGCTGGGCATTGAGATGGTTGACGCGCGGCAGTGCAAGCGCCAG
CGCTGGCTCGCAGAGCCAGTCCCTCTGACCTCGACGTTTCAGGGTGCCCG
CGAAAGCCTCGCAGGGATAGTAAAGAACGTGACCCAGGCGTTGCTTCCTC
TCGTGCCCCTGCTAGTCGAGGTTCCATCGCTGGCGCACCACGCAAAGCTG
GCTTGGCCAGTGGTACGCGGACGACTCCCTCTTCCTCTCGCTTTCGTGGG
CTGTCCCCAACTCAAGTCGAACACGGGACACAAGAAGACGATACTGAAGT
TGTCTAGTGCCGGTGCCGAGCGACACGGGACAACCTCCGTGCCGGAAAAC
TGGGAAAGCCCCGTGCCAAGGCGGGAAGTCTTGCGGTCTTGGGGGGCCAC
TACTTGTACAATCCTGGGCGTAGCGCTGGGCCACCCTGACCTGTCATGTG
CAACGCCAGCAAATGGAGACATGCCTGGGTCACCAGAGGCGTTTGGGAGC
AAGCAGTACACCCAGCGTTCCTATGACAGGGCCGCGGAGTCCTACGACGA
CCTGGACGGGGGCTGGGCGGCGGCAGCGCTGGGCATTGAGGGCCTGCGCT
CTGCCCTGCTGGCCGGCGCCCACGGACGCGTGCTGGAGGTGGGTGTGGGT
ACGGGCCTGAACCTCCCATGCTACCGCCGGGACTTGGTGTCCAGGCTGGA
CGCTATCGACCTCAGCCCCGGGATGCTGAACCAGGGCCTGCGCTCTGCCC
TGCTGGCCGGCGCCCACGGACGCGTGCTGGAGGTGGGTGTGGGTACGGGC
CTGAACCTCCCATGCTACCGCCGGGACTTGGTGTCCAGGCTGGACGCTAT
CGACCTCAGCCCCGGGATGCTGAACCAGGCGAGGAAGAAAGGCGCGGCCC
TGGCCATGGATGGCATTCTGTCACTGCGCGAGATGGATGTGGAGGCATTG
TCCTTCCCCGACAAGACCTTTGACACCGTGGTGGACACATTCTCACTCTG
TGTGTTCAACGACCCGGCGAGGAAGAAAGGCGCGGCCCTGGCCATGGATG
GCATTCTGTCACTGCGCGAGATGGATGTGGAGGCATTGTCCTTCCCCGAC
AAGACCTTTGACACCGTGGTGGACACATTCTCACTCTGTGTGTTCAACGA
CCCGGTGGCCTCTCTGAGGGAGATGGCTCGGGTGTGCAAGCCAGGCGGCA
AAGTACTGCTGCTGGAGAATAGGTGGCCTCTCTGAGGGAGATGGCTCGGG
TGTGCAAGCCAGGCGGCAAAGTACTGCTGCTGGAGAATAGCAAGAGTGAA
TTTGCTCCCCTGGCTGCCTACCAGGATGCCACCGCGGAAGCCGCCGCCCG
TGCGGGGAAGGGCTGCTACTGGAACCAGGATGTGGTGATGCTGGCGCAAC
AGGCTGGCCTTAAAGTGTTGAGGACGCAGAGCGTGGCTGGGGGGCTGTTC
CGCTCTCTCGAGTGTGCCCCAGTACTCTAGCAAGAGTGAATTTGCTCCCC
TGGCTGCCTACCAGGATGCCACCGCGGAAGCCGCCGCCCGTGCGGGGAAG
GGCTGCTACTGGAACCAGGATGTGGTGATGCTGGCGCAACAGGCTGGCCT
TAAAGTGTTGAGGACGCAGAGCGTGGCTGGGGGGCTGTTCCGCTCTCTCG
AGTGTGCCCCAGTACTCTAG
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