mRNA_S-ischiensis_contig110.2410.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig110.2410.1
Unique NamemRNA_S-ischiensis_contig110.2410.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: PSBB_TRICV (Photosystem II CP47 reaction center protein n=85 Tax=Sar TaxID=2698737 RepID=PSBB_TRICV)

HSP 1 Score: 1003 bits (2592), Expect = 0.000e+0
Identity = 469/509 (92.14%), Postives = 496/509 (97.45%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLG+TDSWGGWSITGES+SNPG+WSFEGVAL+HI+LSG+CFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWG +GFNPFNPGGIAAHHIAAG FGI AG+FHLTVRPPQRLYRALRMGNIETVLSSSI+AVFFAAFVTSGTMWYG+A TPIELFGPTRYQWDSGYFQQEIER+VE S++E LSES+AW+RIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHPIFRD++GREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVTV FYGGKLNGQ+FKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH NFALLFF GHLWHG RTIFRDVFTGIG+EVTEQVEFGAFQKLGD++T+KQG V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSITGESVSNPGIWSFEGVALSHIILSGMCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGADGFNPFNPGGIAAHHIAAGIFGIFAGIFHLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVETSVSEGLSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKDGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDKSTKKQGAV 509
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A7U0QGP2_OLILU (Photosystem II CP47 reaction center protein n=13 Tax=Ochrophyta TaxID=2696291 RepID=A0A7U0QGP2_OLILU)

HSP 1 Score: 992 bits (2565), Expect = 0.000e+0
Identity = 468/509 (91.94%), Postives = 494/509 (97.05%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            M LPWYRVH+VVLNDPGRLIAVHLMHT+LV+GWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLG+TDSWGGWSI+GES+SNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFR P T EPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSD+YG+TGKVQ   P+WGPEGFNPFNPGG+AAHHIAAGTFGILAGVFH+TVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERR+E SL +N+S S+AW+ IPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHPIFRD+EGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH NFALLFF GHLWHGSRTIFRDVFTGIG+EVTEQVEFGAFQKLGDE+TRK+G+V
Sbjct:    1 MGLPWYRVHSVVLNDPGRLIAVHLMHTSLVSGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSISGESVSNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRAP-TREPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDSYGLTGKVQAAIPSWGPEGFNPFNPGGVAAHHIAAGTFGILAGVFHITVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRIETSLEQNVSLSDAWSEIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGSRTIFRDVFTGIGAEVTEQVEFGAFQKLGDESTRKKGLV 508
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A7S2V2W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2W1_9STRA)

HSP 1 Score: 990 bits (2560), Expect = 0.000e+0
Identity = 462/509 (90.77%), Postives = 491/509 (96.46%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELAIFDPSDPVLNPMWRQGMFVMPF++R+G+TDSWGGWSITG+S SNPGLWS+EGVALTHIVLSG  FLAAIWHWVYWDLELFRDP++G+P LDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYG+TGKVQP AP+WGPEGFNPFNPGG+AAHH+AAGT G+LAG FHL VRPPQRLYRAL MGNIETVLSSSI+AVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE SL  NLSE+EAW+RIPDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAEAWLGHPIFRDREGREL+VRRMPAFFETFPVILVD+DG++RADIPFRRAESKYSIEQVGV VSFYGGKLNGQSFKDAPTVKK+ARKAQLGEVFEFD+TSLESDGVFRSSPRGWYTFGH NFALLFF GHLWHGSRT+FRDVFTGIG+EVTEQVEFG FQKLGD+TTR+QG V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAIFDPSDPVLNPMWRQGMFVMPFMTRIGITDSWGGWSITGDSTSNPGLWSYEGVALTHIVLSGTLFLAAIWHWVYWDLELFRDPKSGDPGLDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGLTGKVQPAAPSWGPEGFNPFNPGGVAAHHMAAGTVGVLAGTFHLVVRPPQRLYRALSMGNIETVLSSSIAAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEASLTGNLSENEAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELTVRRMPAFFETFPVILVDSDGVVRADIPFRRAESKYSIEQVGVNVSFYGGKLNGQSFKDAPTVKKYARKAQLGEVFEFDKTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGSRTLFRDVFTGIGAEVTEQVEFGVFQKLGDDTTRRQGAV 509
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A2U9NM32_9STRA (Photosystem II CP47 reaction center protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A2U9NM32_9STRA)

HSP 1 Score: 989 bits (2556), Expect = 0.000e+0
Identity = 459/509 (90.18%), Postives = 491/509 (96.46%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            MALPWYRVHTVVLNDPGRLIAVH+MHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLG+TDSWGGWSITGES+SNPGLWSFEGVAL+HIVLSG+CFLAAIWHWVYWDLELF+DPRTG+ ALDLP +FGIHLFLSGLLCFGFGAFHVTGLFGPGIW+SDAYG+TGKVQPVAP+WG +GFNPFN GGIAAHHIAAG FGI AGVFHLTVRPPQRLYR LRMGNIET+LSSSI+AVFFAAF+TSGTMWYG+A TPIELFGPTRYQWDSGYFQQEIER+VE S+ E L+ES+AW+RIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHPIFRD+EGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVTV FYGGKLNGQ+FKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH NFALLFFLGHLWHG RTIFRDVFTGIG+EVTEQVEFGAFQKLGD +T+KQG +
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSITGESVSNPGLWSFEGVALSHIVLSGMCFLAAIWHWVYWDLELFKDPRTGQTALDLPNVFGIHLFLSGLLCFGFGAFHVTGLFGPGIWISDAYGITGKVQPVAPSWGADGFNPFNSGGIAAHHIAAGIFGIFAGVFHLTVRPPQRLYRGLRMGNIETILSSSIAAVFFAAFITSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVEASVTEGLTESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDSSTKKQGAI 509
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A3G2QYB8_9STRA (Photosystem II CP47 reaction center protein n=14 Tax=Ochrophyta TaxID=2696291 RepID=A0A3G2QYB8_9STRA)

HSP 1 Score: 984 bits (2545), Expect = 0.000e+0
Identity = 460/509 (90.37%), Postives = 495/509 (97.25%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            MALPWYRVHTVVLNDPGRLIAVHLMHTALV+GWAGSM LYELAIFDPSDPVLNPMWRQGMFVMPF++RLG+T+SWGGW+ITGES + PG+WSFEGVALTHIVLSGL FLAAIWHWVYWDL+LF+DPRTGEPALDLPKIFGIHL LSG LCFGFGAFHVTGLFGPGIWVSDA+G+TG+VQPVAP+WGPEGFNPFNPGGIA+HHIAAGT GI+AG+FHLTVRPPQRLYRALRMGNIETVLSSSISAVF+AAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE S+++NLSE++AW++IPDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAEAWLGHPIFRDREGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQ+FKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH NFALLFF GHLWHG+RTIFRDVFTGIG EVTEQVEFGAF+K+GD+TT ++G V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYELAIFDPSDPVLNPMWRQGMFVMPFMARLGITESWGGWTITGESSTTPGIWSFEGVALTHIVLSGLLFLAAIWHWVYWDLDLFQDPRTGEPALDLPKIFGIHLLLSGFLCFGFGAFHVTGLFGPGIWVSDAFGLTGRVQPVAPSWGPEGFNPFNPGGIASHHIAAGTLGIIAGIFHLTVRPPQRLYRALRMGNIETVLSSSISAVFWAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVETSVSQNLSETDAWSQIPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGARTIFRDVFTGIGPEVTEQVEFGAFRKIGDKTTPRKGTV 509
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: Q4G3C5_EMIHU (Photosystem II CP47 reaction center protein n=20 Tax=Eukaryota TaxID=2759 RepID=Q4G3C5_EMIHU)

HSP 1 Score: 984 bits (2543), Expect = 0.000e+0
Identity = 459/509 (90.18%), Postives = 491/509 (96.46%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLGVTDSWGGWSITGES+SNPG+WSFEGVALTHIVLSG+CFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLS LLCFGFGAFHVTG FGPGIWVSDAYG+TG+VQ VAPAWG EGFNPFNPGGIA+HHIAAG  G+LAGVFHLT+RPPQRLYRALRMGNIETVLSSSISAVFFAAF+TSGTMWYG+ATTPIELFGPTRYQWDSGYFQQEIERRVE SL+E LS S+AW+RIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHP+F+D+EGREL+VRRMPAFFETFPVILVD DGI+RADIPFRRAESKYSIEQVGV+ +FYGGKLNGQ F DAPTVKK+ARK+QLGEVFEFDRT+LESDGVFRSSPRGWYTFGH NFALLFFLGHLWHG RT+FRDVF GIG+EV EQVEFGAFQKLGD++T+KQGIV
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESVSNPGIWSFEGVALTHIVLSGMCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSSLLCFGFGAFHVTGTFGPGIWVSDAYGITGRVQAVAPAWGAEGFNPFNPGGIASHHIAAGILGLLAGVFHLTIRPPQRLYRALRMGNIETVLSSSISAVFFAAFITSGTMWYGAATTPIELFGPTRYQWDSGYFQQEIERRVESSLSEGLSLSQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDGIVRADIPFRRAESKYSIEQVGVSCNFYGGKLNGQVFTDAPTVKKYARKSQLGEVFEFDRTTLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGGRTLFRDVFAGIGAEVLEQVEFGAFQKLGDKSTKKQGIV 509
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A6G6D7A3_ECTSI (Photosystem II CP47 reaction center protein n=55 Tax=Phaeophyceae TaxID=2870 RepID=A0A6G6D7A3_ECTSI)

HSP 1 Score: 978 bits (2529), Expect = 0.000e+0
Identity = 463/511 (90.61%), Postives = 489/511 (95.69%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNP--GLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            MALPWYRVHTVVLNDPGRLIAVHLMHT LVAGWAGSM LYEL+IFD SDP+LNPMWRQGMFVMPF++RLGV+DSW GW I GE  S P   LW +EGVA THI+LSGLCFLAA+WHWVYWDLELFRDPRTGEP+LDLPKIFGIHLFLSGLLCFGFGAFHVTG FGPGIWVSDAYG+TG+VQPVAP+WGP GFNPFNPGGIA+HH+AAG+FG+LAG FHLT+RPPQRLYRALRMGNIETVLSSSI+AVFFAAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE+SLNE LSESEAW+ +PDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVIL+D DGIIRADIPFRRAESKYSIEQVGV VSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLN ALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQG+V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTGLVAGWAGSMALYELSIFDFSDPILNPMWRQGMFVMPFMTRLGVSDSWTGWDIAGER-SEPIASLWCYEGVAYTHIILSGLCFLAAVWHWVYWDLELFRDPRTGEPSLDLPKIFGIHLFLSGLLCFGFGAFHVTGFFGPGIWVSDAYGLTGQVQPVAPSWGPSGFNPFNPGGIASHHMAAGSFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESEAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILIDKDGIIRADIPFRRAESKYSIEQVGVNVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNLALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGLV 510
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: PSBB_PORPU (Photosystem II CP47 reaction center protein n=231 Tax=Eukaryota TaxID=2759 RepID=PSBB_PORPU)

HSP 1 Score: 974 bits (2517), Expect = 0.000e+0
Identity = 455/509 (89.39%), Postives = 485/509 (95.28%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            M LPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLGVTDSWGGWSITGES+SNPGLWS EGVALTHIVLSG+ FLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHL LS LLCFGFGAFHVTGLFGPG+WVSD YGVTGKV PVAPAWGPEGFNPFNPGG+A+HHIAAGT GILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFF+AF+T GTMWYGSATTPIELFGPTRYQWDSGYFQQEIE+RVE ++ +  + SEAW+RIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDG+AEAWLGHP+F+D+EGRELSVRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVT SFYGGKLNGQ F DAP+VKK+ARKAQLGEVFEFDRT+LESDGVFRSSPRGW+TFGH NFAL+FF GHLWHGSRTIFRDVF GIG+EVTEQVEFGAFQKLGD +++KQG V
Sbjct:    1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESVSNPGLWSLEGVALTHIVLSGMLFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHVTGLFGPGMWVSDGYGVTGKVLPVAPAWGPEGFNPFNPGGVASHHIAAGTVGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFITCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIEKRVENAIADGAAPSEAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGVAEAWLGHPVFQDKEGRELSVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTASFYGGKLNGQVFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 509
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: PSBB_GUITH (Photosystem II CP47 reaction center protein n=12 Tax=Cryptophyceae TaxID=3027 RepID=PSBB_GUITH)

HSP 1 Score: 971 bits (2511), Expect = 0.000e+0
Identity = 450/509 (88.41%), Postives = 485/509 (95.28%), Query Frame = 1 
Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            M LPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGM+VMPF++R+GVTDSWGGWSITGES+SNPG WSFEGVAL HI LSGL FLAA+WHWVYWDLELFRDPRTG PALDLPKIFGIHL L+GLLCFGFGAFHVTG +GPGIWVSDAYG+TGKVQPVAP WGPEGFNPFNP G+A+HHIAAG  G +AG+FH+ VRPPQRLYRALRMGNIETVLSSSI+AVFFAAF+T+GTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE SLNE LS SEAW+RIPDKLAFYDY+GNNPAKGGLFRAGPM+KGDGIAEAWLGHP+F+D+EGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYS+EQVGVTVSFYGGKLNGQ++ DAPTVKK+ARKAQLGEV EFDRT+LESDGVFRSSPRGWYTFGH NFALLFFLGHLWHGSRT+FRDVF+GIG+EVTEQVEFGAFQKLGD +T+KQG V
Sbjct:    1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMYVMPFMARIGVTDSWGGWSITGESVSNPGFWSFEGVALAHIGLSGLLFLAAVWHWVYWDLELFRDPRTGNPALDLPKIFGIHLVLAGLLCFGFGAFHVTGAWGPGIWVSDAYGITGKVQPVAPTWGPEGFNPFNPSGVASHHIAAGILGFIAGIFHIAVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITTGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGLSLSEAWSRIPDKLAFYDYVGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSVEQVGVTVSFYGGKLNGQTYTDAPTVKKYARKAQLGEVLEFDRTTLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGSRTLFRDVFSGIGAEVTEQVEFGAFQKLGDRSTKKQGAV 509
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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A1C9CDW4_PORSO (Photosystem II CP47 reaction center protein n=1 Tax=Porphyridium sordidum TaxID=28024 RepID=A0A1C9CDW4_PORSO)

HSP 1 Score: 970 bits (2507), Expect = 0.000e+0
Identity = 452/501 (90.22%), Postives = 483/501 (96.41%), Query Frame = 1 
Query:   25 HTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 1527
            HTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLGVTDSWGGWSITGES+SNPG+WSFEGVALTHIVLSGL FLAAIWHW+YWDLELFRDPRTGEPALDLPKIFGIHL L+ +LCFGFGAFHVTGLFGPGIWVSDAYG+TGKVQPVAPAWGPEGFNPFNPGG+A+HHIAAGT GILAGVFHL++RPPQRLYRALRMGNIETVLSSSI+AVFFAAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIER+VE SL+E LS ++AW+RIPDKLAFYDYIGNNPAKGGLFR+GPMDKGDGIAEAWLGHP+F+D+EGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVT+ FYGGKLNGQSF DAPTVKK+ARKAQLGEVFEFDR +LESDGVFRSSPRGWYTFGH NFALLFF GHLWHGSRT+FRDVF GIG+EVTEQ EFGAF KLGD TT+KQGIV
Sbjct:    8 HTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGVTDSWGGWSITGESVSNPGIWSFEGVALTHIVLSGLLFLAAIWHWIYWDLELFRDPRTGEPALDLPKIFGIHLLLASILCFGFGAFHVTGLFGPGIWVSDAYGITGKVQPVAPAWGPEGFNPFNPGGVASHHIAAGTVGILAGVFHLSIRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERQVENSLSEGLSLNDAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMDKGDGIAEAWLGHPVFKDKEGRELTVRRMPAFFETFPVILVDQDGIIRADIPFRRAESKYSIEQVGVTIDFYGGKLNGQSFTDAPTVKKYARKAQLGEVFEFDRITLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGSRTLFRDVFAGIGAEVTEQAEFGAFTKLGDRTTKKQGIV 508
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PSBB_TRICV0.000e+092.14Photosystem II CP47 reaction center protein n=85 T... [more]
A0A7U0QGP2_OLILU0.000e+091.94Photosystem II CP47 reaction center protein n=13 T... [more]
A0A7S2V2W1_9STRA0.000e+090.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2U9NM32_9STRA0.000e+090.18Photosystem II CP47 reaction center protein n=2 Ta... [more]
A0A3G2QYB8_9STRA0.000e+090.37Photosystem II CP47 reaction center protein n=14 T... [more]
Q4G3C5_EMIHU0.000e+090.18Photosystem II CP47 reaction center protein n=20 T... [more]
A0A6G6D7A3_ECTSI0.000e+090.61Photosystem II CP47 reaction center protein n=55 T... [more]
PSBB_PORPU0.000e+089.39Photosystem II CP47 reaction center protein n=231 ... [more]
PSBB_GUITH0.000e+088.41Photosystem II CP47 reaction center protein n=12 T... [more]
A0A1C9CDW4_PORSO0.000e+090.22Photosystem II CP47 reaction center protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig110contigS-ischiensis_contig110:82111..83640 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1009.2
Seed ortholog evalue6.8e-292
Seed eggNOG ortholog159749.E7BWH1
Preferred namepsbB
KEGG koko:K02704
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00161
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009987,GO:0010207,GO:0010287,GO:0015979,GO:0016020,GO:0016043,GO:0019684,GO:0022607,GO:0031976,GO:0031984,GO:0034357,GO:0034622,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0065003,GO:0071840
EggNOG free text desc.One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation
EggNOG OGs28JG1@1,2QRV6@2759,2XEM0@2836
COG Functional cat.P
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194
Hectar predicted targeting categoryother localisation
Exons1
Model size1530
Cds size1530
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815621.465391-CDS-S-ischiensis_contig110:82110..836401622815621.465391-CDS-S-ischiensis_contig110:82110..83640Schizocladia ischiensis KU_0333CDSS-ischiensis_contig110 82111..83640 +
1695739809.653137-CDS-S-ischiensis_contig110:82110..836401695739809.653137-CDS-S-ischiensis_contig110:82110..83640Schizocladia ischiensis KU_0333CDSS-ischiensis_contig110 82111..83640 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig110.2410.1prot_S-ischiensis_contig110.2410.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig110 82111..83640 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig110.2410.1

>prot_S-ischiensis_contig110.2410.1 ID=prot_S-ischiensis_contig110.2410.1|Name=mRNA_S-ischiensis_contig110.2410.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=510bp
MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDP
VLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTH
IVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLC
FGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAA
HHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAF
VTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESE
AWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDRE
GRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVS
FYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGW
YTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGD
ETTRKQGIV*
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mRNA from alignment at S-ischiensis_contig110:82111..83640+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig110.2410.1 ID=mRNA_S-ischiensis_contig110.2410.1|Name=mRNA_S-ischiensis_contig110.2410.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1530bp|location=Sequence derived from alignment at S-ischiensis_contig110:82111..83640+ (Schizocladia ischiensis KU_0333)
ATGGCACTACCATGGTATCGTGTTCATACGGTTGTTCTTAATGATCCAGG
TCGTCTAATTGCTGTTCATTTAATGCATACTGCATTAGTAGCAGGTTGGG
CAGGTTCCATGACATTATATGAATTAGCAATTTTTGATCCCTCAGATCCC
GTTTTAAATCCAATGTGGCGTCAAGGAATGTTTGTTATGCCTTTTATTTC
AAGACTCGGTGTTACGGATTCCTGGGGGGGTTGGAGTATTACAGGTGAAA
GTATTTCCAATCCTGGGTTATGGAGCTTTGAAGGAGTAGCATTAACTCAC
ATCGTTTTATCAGGTCTTTGTTTTTTAGCAGCAATTTGGCATTGGGTTTA
TTGGGATCTTGAATTATTCCGTGATCCTAGAACAGGAGAACCCGCATTAG
ATTTACCCAAAATTTTTGGAATTCATTTATTTTTATCGGGACTATTATGT
TTCGGATTTGGTGCCTTTCATGTAACTGGTTTATTTGGTCCAGGAATTTG
GGTTTCCGATGCTTATGGTGTCACAGGTAAAGTACAGCCGGTTGCTCCTG
CGTGGGGTCCCGAAGGTTTTAATCCATTCAACCCGGGTGGAATTGCAGCA
CATCATATTGCTGCTGGGACGTTTGGTATATTAGCAGGTGTCTTTCATTT
AACAGTTCGTCCTCCACAACGGTTATATAGAGCACTGCGTATGGGTAACA
TTGAAACTGTGCTTTCAAGTAGTATTTCGGCTGTCTTCTTTGCAGCTTTT
GTGACGTCAGGAACAATGTGGTATGGTTCTGCAACAACACCAATTGAATT
ATTTGGACCAACTCGTTATCAATGGGATAGTGGTTATTTTCAGCAGGAAA
TTGAACGCCGTGTCGAACTTTCATTAAATGAAAATTTATCTGAAAGTGAA
GCGTGGGCACGTATCCCAGATAAATTAGCATTTTATGATTATATCGGTAA
TAATCCTGCTAAGGGTGGTTTATTTCGTGCTGGTCCAATGGATAAAGGAG
ATGGTATTGCAGAGGCATGGTTAGGACACCCAATCTTTCGTGACCGTGAA
GGCCGAGAATTATCGGTTCGTCGTATGCCGGCCTTTTTTGAAACCTTTCC
TGTAATTTTAGTCGATAATGATGGAATAATTCGAGCAGATATTCCTTTTC
GAAGAGCTGAATCTAAATATAGTATTGAACAAGTTGGTGTGACAGTAAGT
TTCTATGGTGGTAAATTAAATGGTCAATCATTTAAAGATGCGCCAACAGT
AAAGAAATTTGCTCGAAAAGCACAATTAGGAGAAGTTTTTGAATTTGATC
GAACAAGTTTAGAATCGGATGGTGTTTTTAGAAGTAGCCCACGTGGTTGG
TATACTTTTGGACATTTAAATTTTGCTTTATTATTCTTCTTAGGTCATTT
GTGGCATGGTTCACGTACAATCTTTCGTGATGTATTTACAGGTATTGGTT
CAGAAGTTACTGAGCAAGTTGAATTTGGTGCTTTCCAAAAACTAGGTGAT
GAAACAACTCGTAAACAAGGCATAGTGTAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig110:82111..83640+

>mRNA_S-ischiensis_contig110.2410.1 ID=mRNA_S-ischiensis_contig110.2410.1|Name=mRNA_S-ischiensis_contig110.2410.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3060bp|location=Sequence derived from alignment at S-ischiensis_contig110:82111..83640+ (Schizocladia ischiensis KU_0333)
ATGGCACTACCATGGTATCGTGTTCATACGGTTGTTCTTAATGATCCAGG
TCGTCTAATTGCTGTTCATTTAATGCATACTGCATTAGTAGCAGGTTGGG
CAGGTTCCATGACATTATATGAATTAGCAATTTTTGATCCCTCAGATCCC
GTTTTAAATCCAATGTGGCGTCAAGGAATGTTTGTTATGCCTTTTATTTC
AAGACTCGGTGTTACGGATTCCTGGGGGGGTTGGAGTATTACAGGTGAAA
GTATTTCCAATCCTGGGTTATGGAGCTTTGAAGGAGTAGCATTAACTCAC
ATCGTTTTATCAGGTCTTTGTTTTTTAGCAGCAATTTGGCATTGGGTTTA
TTGGGATCTTGAATTATTCCGTGATCCTAGAACAGGAGAACCCGCATTAG
ATTTACCCAAAATTTTTGGAATTCATTTATTTTTATCGGGACTATTATGT
TTCGGATTTGGTGCCTTTCATGTAACTGGTTTATTTGGTCCAGGAATTTG
GGTTTCCGATGCTTATGGTGTCACAGGTAAAGTACAGCCGGTTGCTCCTG
CGTGGGGTCCCGAAGGTTTTAATCCATTCAACCCGGGTGGAATTGCAGCA
CATCATATTGCTGCTGGGACGTTTGGTATATTAGCAGGTGTCTTTCATTT
AACAGTTCGTCCTCCACAACGGTTATATAGAGCACTGCGTATGGGTAACA
TTGAAACTGTGCTTTCAAGTAGTATTTCGGCTGTCTTCTTTGCAGCTTTT
GTGACGTCAGGAACAATGTGGTATGGTTCTGCAACAACACCAATTGAATT
ATTTGGACCAACTCGTTATCAATGGGATAGTGGTTATTTTCAGCAGGAAA
TTGAACGCCGTGTCGAACTTTCATTAAATGAAAATTTATCTGAAAGTGAA
GCGTGGGCACGTATCCCAGATAAATTAGCATTTTATGATTATATCGGTAA
TAATCCTGCTAAGGGTGGTTTATTTCGTGCTGGTCCAATGGATAAAGGAG
ATGGTATTGCAGAGGCATGGTTAGGACACCCAATCTTTCGTGACCGTGAA
GGCCGAGAATTATCGGTTCGTCGTATGCCGGCCTTTTTTGAAACCTTTCC
TGTAATTTTAGTCGATAATGATGGAATAATTCGAGCAGATATTCCTTTTC
GAAGAGCTGAATCTAAATATAGTATTGAACAAGTTGGTGTGACAGTAAGT
TTCTATGGTGGTAAATTAAATGGTCAATCATTTAAAGATGCGCCAACAGT
AAAGAAATTTGCTCGAAAAGCACAATTAGGAGAAGTTTTTGAATTTGATC
GAACAAGTTTAGAATCGGATGGTGTTTTTAGAAGTAGCCCACGTGGTTGG
TATACTTTTGGACATTTAAATTTTGCTTTATTATTCTTCTTAGGTCATTT
GTGGCATGGTTCACGTACAATCTTTCGTGATGTATTTACAGGTATTGGTT
CAGAAGTTACTGAGCAAGTTGAATTTGGTGCTTTCCAAAAACTAGGTGAT
GAAACAACTCGTAAACAAGGCATAGTGTAGATGGCACTACCATGGTATCG
TGTTCATACGGTTGTTCTTAATGATCCAGGTCGTCTAATTGCTGTTCATT
TAATGCATACTGCATTAGTAGCAGGTTGGGCAGGTTCCATGACATTATAT
GAATTAGCAATTTTTGATCCCTCAGATCCCGTTTTAAATCCAATGTGGCG
TCAAGGAATGTTTGTTATGCCTTTTATTTCAAGACTCGGTGTTACGGATT
CCTGGGGGGGTTGGAGTATTACAGGTGAAAGTATTTCCAATCCTGGGTTA
TGGAGCTTTGAAGGAGTAGCATTAACTCACATCGTTTTATCAGGTCTTTG
TTTTTTAGCAGCAATTTGGCATTGGGTTTATTGGGATCTTGAATTATTCC
GTGATCCTAGAACAGGAGAACCCGCATTAGATTTACCCAAAATTTTTGGA
ATTCATTTATTTTTATCGGGACTATTATGTTTCGGATTTGGTGCCTTTCA
TGTAACTGGTTTATTTGGTCCAGGAATTTGGGTTTCCGATGCTTATGGTG
TCACAGGTAAAGTACAGCCGGTTGCTCCTGCGTGGGGTCCCGAAGGTTTT
AATCCATTCAACCCGGGTGGAATTGCAGCACATCATATTGCTGCTGGGAC
GTTTGGTATATTAGCAGGTGTCTTTCATTTAACAGTTCGTCCTCCACAAC
GGTTATATAGAGCACTGCGTATGGGTAACATTGAAACTGTGCTTTCAAGT
AGTATTTCGGCTGTCTTCTTTGCAGCTTTTGTGACGTCAGGAACAATGTG
GTATGGTTCTGCAACAACACCAATTGAATTATTTGGACCAACTCGTTATC
AATGGGATAGTGGTTATTTTCAGCAGGAAATTGAACGCCGTGTCGAACTT
TCATTAAATGAAAATTTATCTGAAAGTGAAGCGTGGGCACGTATCCCAGA
TAAATTAGCATTTTATGATTATATCGGTAATAATCCTGCTAAGGGTGGTT
TATTTCGTGCTGGTCCAATGGATAAAGGAGATGGTATTGCAGAGGCATGG
TTAGGACACCCAATCTTTCGTGACCGTGAAGGCCGAGAATTATCGGTTCG
TCGTATGCCGGCCTTTTTTGAAACCTTTCCTGTAATTTTAGTCGATAATG
ATGGAATAATTCGAGCAGATATTCCTTTTCGAAGAGCTGAATCTAAATAT
AGTATTGAACAAGTTGGTGTGACAGTAAGTTTCTATGGTGGTAAATTAAA
TGGTCAATCATTTAAAGATGCGCCAACAGTAAAGAAATTTGCTCGAAAAG
CACAATTAGGAGAAGTTTTTGAATTTGATCGAACAAGTTTAGAATCGGAT
GGTGTTTTTAGAAGTAGCCCACGTGGTTGGTATACTTTTGGACATTTAAA
TTTTGCTTTATTATTCTTCTTAGGTCATTTGTGGCATGGTTCACGTACAA
TCTTTCGTGATGTATTTACAGGTATTGGTTCAGAAGTTACTGAGCAAGTT
GAATTTGGTGCTTTCCAAAAACTAGGTGATGAAACAACTCGTAAACAAGG
CATAGTGTAG
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